Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0037_E11
(2575 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_854289.1| PREDICTED: similar to Prolyl endopeptidase (Pos... 1306 0.0
Alignment gi|XP_539066.2| PREDICTED: similar to prolyl endopeptidase isof... 1303 0.0
Alignment gi|XP_868343.1| PREDICTED: similar to prolyl endopeptidase isof... 1300 0.0
Alignment gi|XP_868346.1| PREDICTED: similar to prolyl endopeptidase isof... 1296 0.0
Alignment gi|XP_868339.1| PREDICTED: similar to Prolyl endopeptidase (Pos... 620 e-177
Alignment gi|XP_864442.1| PREDICTED: similar to prolyl endopeptidase-like... 100 5e-21
Alignment gi|XP_531803.2| PREDICTED: similar to prolyl endopeptidase-like... 100 5e-21
Alignment gi|XP_864400.1| PREDICTED: similar to prolyl endopeptidase-like... 98 3e-20
Alignment gi|XP_864419.1| PREDICTED: similar to prolyl endopeptidase-like... 95 4e-19
>ref|XP_854289.1| PREDICTED: similar to Prolyl endopeptidase (Post-proline cleaving
enzyme) (PE) isoform 2 [Canis familiaris].
Length = 651
Score = 1306 bits (3380), Expect = 0.0
Identities = 625/650 (96%), Positives = 637/650 (98%), Gaps = 7/650 (1%)
Frame = +1
Query: 400 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVA 579
MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSL+GEARVFLDPN+LSDDGTVA
Sbjct: 1 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLDGEARVFLDPNLLSDDGTVA 60
Query: 580 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 759
LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF
Sbjct: 61 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 120
Query: 760 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY 939
YN+YPQQDGKSDGTETSTNLHQKL YHVLGTDQSED+LCAEFPDEPKWMGGAELSDDGRY
Sbjct: 121 YNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDVLCAEFPDEPKWMGGAELSDDGRY 180
Query: 940 VLLSIREGCDPVNRLWYCDLQQESNGITG-------ILKWVKLIDNFEGEYDYVTNEGTV 1098
VLLSIREGCDPVNRLWYCDLQQESNGI+G ILKWVKLIDNFEGEYDYVTNEGTV
Sbjct: 181 VLLSIREGCDPVNRLWYCDLQQESNGISGMLGLSPGILKWVKLIDNFEGEYDYVTNEGTV 240
Query: 1099 FTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN 1278
FTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV+N
Sbjct: 241 FTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVRN 300
Query: 1279 TLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEP 1458
LQLHDLATGALLK FPLEVGS+VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEP
Sbjct: 301 ILQLHDLATGALLKTFPLEVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEP 360
Query: 1459 RVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNIS 1638
RVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNIS
Sbjct: 361 RVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNIS 420
Query: 1639 ITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIK 1818
ITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQ AAEYLIK
Sbjct: 421 ITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQHAAEYLIK 480
Query: 1819 EGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDY 1998
EGYTSPKRLTINGGSNGGLLVA CANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDY
Sbjct: 481 EGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDY 540
Query: 1999 GCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYI 2178
GCSDSKQHFEWLIKYSPLHNV+LPEADD QYPSMLLLTADHDDRVVPLHSLKFIATLQY+
Sbjct: 541 GCSDSKQHFEWLIKYSPLHNVRLPEADDTQYPSMLLLTADHDDRVVPLHSLKFIATLQYV 600
Query: 2179 VGRSRKQNNPLLIHVDTKAGHGAGEPTAKVIEEVSDMFAFIARCLNIDWI 2328
VGRSRKQ+NPLLIHVDTKAGHGAG+PTAKVIEEVSDMFAFIARCL+IDWI
Sbjct: 601 VGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLDIDWI 650
>ref|XP_539066.2| PREDICTED: similar to prolyl endopeptidase isoform 1 [Canis
familiaris].
Length = 647
Score = 1303 bits (3373), Expect = 0.0
Identities = 623/646 (96%), Positives = 636/646 (98%), Gaps = 3/646 (0%)
Frame = +1
Query: 400 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVA 579
MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSL+GEARVFLDPN+LSDDGTVA
Sbjct: 1 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLDGEARVFLDPNLLSDDGTVA 60
Query: 580 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 759
LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF
Sbjct: 61 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 120
Query: 760 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY 939
YN+YPQQDGKSDGTETSTNLHQKL YHVLGTDQSED+LCAEFPDEPKWMGGAELSDDGRY
Sbjct: 121 YNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDVLCAEFPDEPKWMGGAELSDDGRY 180
Query: 940 VLLSIREGCDPVNRLWYCDLQQESNGITGIL---KWVKLIDNFEGEYDYVTNEGTVFTFK 1110
VLLSIREGCDPVNRLWYCDLQQESNGI+G L +WVKLIDNFEGEYDYVTNEGTVFTFK
Sbjct: 181 VLLSIREGCDPVNRLWYCDLQQESNGISGKLSFKQWVKLIDNFEGEYDYVTNEGTVFTFK 240
Query: 1111 TNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL 1290
TNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV+N LQL
Sbjct: 241 TNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVRNILQL 300
Query: 1291 HDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFR 1470
HDLATGALLK FPLEVGS+VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFR
Sbjct: 301 HDLATGALLKTFPLEVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFR 360
Query: 1471 EVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPN 1650
EVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPN
Sbjct: 361 EVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPN 420
Query: 1651 YSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYT 1830
YSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQ AAEYLIKEGYT
Sbjct: 421 YSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQHAAEYLIKEGYT 480
Query: 1831 SPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSD 2010
SPKRLTINGGSNGGLLVA CANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSD
Sbjct: 481 SPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSD 540
Query: 2011 SKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRS 2190
SKQHFEWLIKYSPLHNV+LPEADD QYPSMLLLTADHDDRVVPLHSLKFIATLQY+VGRS
Sbjct: 541 SKQHFEWLIKYSPLHNVRLPEADDTQYPSMLLLTADHDDRVVPLHSLKFIATLQYVVGRS 600
Query: 2191 RKQNNPLLIHVDTKAGHGAGEPTAKVIEEVSDMFAFIARCLNIDWI 2328
RKQ+NPLLIHVDTKAGHGAG+PTAKVIEEVSDMFAFIARCL+IDWI
Sbjct: 601 RKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLDIDWI 646
>ref|XP_868343.1| PREDICTED: similar to prolyl endopeptidase isoform 4 [Canis
familiaris].
Length = 655
Score = 1300 bits (3365), Expect = 0.0
Identities = 625/654 (95%), Positives = 637/654 (97%), Gaps = 11/654 (1%)
Frame = +1
Query: 400 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVA 579
MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSL+GEARVFLDPN+LSDDGTVA
Sbjct: 1 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLDGEARVFLDPNLLSDDGTVA 60
Query: 580 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 759
LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF
Sbjct: 61 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 120
Query: 760 YNAYPQQDGKSD-----GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELS 924
YN+YPQQDGKSD GTETSTNLHQKL YHVLGTDQSED+LCAEFPDEPKWMGGAELS
Sbjct: 121 YNSYPQQDGKSDVNLESGTETSTNLHQKLCYHVLGTDQSEDVLCAEFPDEPKWMGGAELS 180
Query: 925 DDGRYVLLSIREGCDPVNRLWYCDLQQESNGITG------ILKWVKLIDNFEGEYDYVTN 1086
DDGRYVLLSIREGCDPVNRLWYCDLQQESNGI+G ILKWVKLIDNFEGEYDYVTN
Sbjct: 181 DDGRYVLLSIREGCDPVNRLWYCDLQQESNGISGFQSTAGILKWVKLIDNFEGEYDYVTN 240
Query: 1087 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 1266
EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH
Sbjct: 241 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH 300
Query: 1267 DVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 1446
DV+N LQLHDLATGALLK FPLEVGS+VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE
Sbjct: 301 DVRNILQLHDLATGALLKTFPLEVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 360
Query: 1447 ELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGG 1626
ELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGG
Sbjct: 361 ELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGG 420
Query: 1627 FNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAE 1806
FNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQ AAE
Sbjct: 421 FNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQHAAE 480
Query: 1807 YLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAW 1986
YLIKEGYTSPKRLTINGGSNGGLLVA CANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAW
Sbjct: 481 YLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAW 540
Query: 1987 TTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIAT 2166
TTDYGCSDSKQHFEWLIKYSPLHNV+LPEADD QYPSMLLLTADHDDRVVPLHSLKFIAT
Sbjct: 541 TTDYGCSDSKQHFEWLIKYSPLHNVRLPEADDTQYPSMLLLTADHDDRVVPLHSLKFIAT 600
Query: 2167 LQYIVGRSRKQNNPLLIHVDTKAGHGAGEPTAKVIEEVSDMFAFIARCLNIDWI 2328
LQY+VGRSRKQ+NPLLIHVDTKAGHGAG+PTAKVIEEVSDMFAFIARCL+IDWI
Sbjct: 601 LQYVVGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLDIDWI 654
>ref|XP_868346.1| PREDICTED: similar to prolyl endopeptidase isoform 5 [Canis
familiaris].
Length = 653
Score = 1296 bits (3355), Expect = 0.0
Identities = 623/652 (95%), Positives = 635/652 (97%), Gaps = 9/652 (1%)
Frame = +1
Query: 400 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVA 579
MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSL+GEARVFLDPN+LSDDGTVA
Sbjct: 1 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLDGEARVFLDPNLLSDDGTVA 60
Query: 580 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 759
LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF
Sbjct: 61 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 120
Query: 760 YNAYPQQDGKSD--GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG 933
YN+YPQQDGK GTETSTNLHQKL YHVLGTDQSED+LCAEFPDEPKWMGGAELSDDG
Sbjct: 121 YNSYPQQDGKKREAGTETSTNLHQKLCYHVLGTDQSEDVLCAEFPDEPKWMGGAELSDDG 180
Query: 934 RYVLLSIREGCDPVNRLWYCDLQQESNGITG-------ILKWVKLIDNFEGEYDYVTNEG 1092
RYVLLSIREGCDPVNRLWYCDLQQESNGI+G ILKWVKLIDNFEGEYDYVTNEG
Sbjct: 181 RYVLLSIREGCDPVNRLWYCDLQQESNGISGMLGLSPGILKWVKLIDNFEGEYDYVTNEG 240
Query: 1093 TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 1272
TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV
Sbjct: 241 TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 300
Query: 1273 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL 1452
+N LQLHDLATGALLK FPLEVGS+VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL
Sbjct: 301 RNILQLHDLATGALLKTFPLEVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL 360
Query: 1453 EPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFN 1632
EPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFN
Sbjct: 361 EPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFN 420
Query: 1633 ISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYL 1812
ISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQ AAEYL
Sbjct: 421 ISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQHAAEYL 480
Query: 1813 IKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTT 1992
IKEGYTSPKRLTINGGSNGGLLVA CANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTT
Sbjct: 481 IKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTT 540
Query: 1993 DYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQ 2172
DYGCSDSKQHFEWLIKYSPLHNV+LPEADD QYPSMLLLTADHDDRVVPLHSLKFIATLQ
Sbjct: 541 DYGCSDSKQHFEWLIKYSPLHNVRLPEADDTQYPSMLLLTADHDDRVVPLHSLKFIATLQ 600
Query: 2173 YIVGRSRKQNNPLLIHVDTKAGHGAGEPTAKVIEEVSDMFAFIARCLNIDWI 2328
Y+VGRSRKQ+NPLLIHVDTKAGHGAG+PTAKVIEEVSDMFAFIARCL+IDWI
Sbjct: 601 YVVGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLDIDWI 652
>ref|XP_868339.1| PREDICTED: similar to Prolyl endopeptidase (Post-proline cleaving
enzyme) (PE) isoform 3 [Canis familiaris].
Length = 578
Score = 620 bits (1600), Expect = e-177
Identities = 297/305 (97%), Positives = 302/305 (99%)
Frame = +1
Query: 1414 GIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDG 1593
GIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDG
Sbjct: 273 GIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDG 332
Query: 1594 SHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQ 1773
SHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQ
Sbjct: 333 SHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQ 392
Query: 1774 NCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDML 1953
NCFDDFQ AAEYLIKEGYTSPKRLTINGGSNGGLLVA CANQRPDLFGCVIAQVGVMDML
Sbjct: 393 NCFDDFQHAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDML 452
Query: 1954 KFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRV 2133
KFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNV+LPEADD QYPSMLLLTADHDDRV
Sbjct: 453 KFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVRLPEADDTQYPSMLLLTADHDDRV 512
Query: 2134 VPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGEPTAKVIEEVSDMFAFIARCL 2313
VPLHSLKFIATLQY+VGRSRKQ+NPLLIHVDTKAGHGAG+PTAKVIEEVSDMFAFIARCL
Sbjct: 513 VPLHSLKFIATLQYVVGRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCL 572
Query: 2314 NIDWI 2328
+IDWI
Sbjct: 573 DIDWI 577
Score = 569 bits (1466), Expect = e-162
Identities = 266/272 (97%), Positives = 271/272 (99%)
Frame = +1
Query: 400 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVA 579
MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSL+GEARVFLDPN+LSDDGTVA
Sbjct: 1 MTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLDGEARVFLDPNLLSDDGTVA 60
Query: 580 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 759
LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF
Sbjct: 61 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMF 120
Query: 760 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY 939
YN+YPQQDGKSDGTETSTNLHQKL YHVLGTDQSED+LCAEFPDEPKWMGGAELSDDGRY
Sbjct: 121 YNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDVLCAEFPDEPKWMGGAELSDDGRY 180
Query: 940 VLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNR 1119
VLLSIREGCDPVNRLWYCDLQQESNGI+GILKWVKLIDNFEGEYDYVTNEGTVFTFKTNR
Sbjct: 181 VLLSIREGCDPVNRLWYCDLQQESNGISGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNR 240
Query: 1120 HSPNYRLINIDFTDPEESKWKVLVPEHEKDVL 1215
HSPNYRLINIDFTDPEESKWKVLVPEHEKDVL
Sbjct: 241 HSPNYRLINIDFTDPEESKWKVLVPEHEKDVL 272
>ref|XP_864442.1| PREDICTED: similar to prolyl endopeptidase-like isoform 5 [Canis
familiaris].
Length = 638
Score = 100 bits (250), Expect = 5e-21
Identities = 116/469 (24%), Positives = 198/469 (42%), Gaps = 17/469 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ ++I + +W D I G+L +V+
Sbjct: 160 DPSYFVFLYLTKDSRFLTINIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHR 217
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 218 DD---ELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVVDLDMFKD-----H 269
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 270 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 319
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + +++ SKDG +PM I HK
Sbjct: 320 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKSVPMTIFHKT 375
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ R + V G +LA ++RGGGE G WH G
Sbjct: 376 DSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQWHADG 434
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + + L +G++ P T+ S GG+LV N P+L V +
Sbjct: 435 RLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLVGALCNSNPELLRAVTLEA 494
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 495 PFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HYPSIH 549
Query: 2104 LLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHV-DTKAGHGA 2247
+ ++D+RV L+ IV + K + H DT G+ A
Sbjct: 550 ITAYENDERV----------PLKGIVNYTEKLKEAITEHAKDTGEGYQA 588
>ref|XP_531803.2| PREDICTED: similar to prolyl endopeptidase-like isoform 1 [Canis
familiaris].
Length = 727
Score = 100 bits (250), Expect = 5e-21
Identities = 116/469 (24%), Positives = 198/469 (42%), Gaps = 17/469 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ ++I + +W D I G+L +V+
Sbjct: 249 DPSYFVFLYLTKDSRFLTINIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHR 306
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 307 DD---ELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVVDLDMFKD-----H 358
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 359 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 408
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + +++ SKDG +PM I HK
Sbjct: 409 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKSVPMTIFHKT 464
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ R + V G +LA ++RGGGE G WH G
Sbjct: 465 DSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQWHADG 523
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + + L +G++ P T+ S GG+LV N P+L V +
Sbjct: 524 RLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLVGALCNSNPELLRAVTLEA 583
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 584 PFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HYPSIH 638
Query: 2104 LLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHV-DTKAGHGA 2247
+ ++D+RV L+ IV + K + H DT G+ A
Sbjct: 639 ITAYENDERV----------PLKGIVNYTEKLKEAITEHAKDTGEGYQA 677
>ref|XP_864400.1| PREDICTED: similar to prolyl endopeptidase-like isoform 3 [Canis
familiaris].
Length = 665
Score = 98.2 bits (243), Expect = 3e-20
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 5/315 (1%)
Frame = +1
Query: 1318 KIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDA 1497
K+ P G ++ + K+ +Q S + P Y T + E ++F E +
Sbjct: 323 KLPPWACGFIMDTNSDPKNCP--FQLCSPIRPPKYY----TYKFAEGKLFEETGHEDPIT 376
Query: 1498 SDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFV 1677
+ +++ SKDG +PM I HK + P ++ YG + + + N+ R + V
Sbjct: 377 KTSRVLRLEAKSKDGKSVPMTIFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLV 436
Query: 1678 RHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTING 1857
G +LA ++RGGGE G WH G L K N D + + L +G++ P T+
Sbjct: 437 DD-GWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTA 495
Query: 1858 GSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHF 2025
S GG+LV N P+L V + +D+L T + ++G S ++H
Sbjct: 496 FSAGGVLVGALCNSNPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHK 555
Query: 2026 EWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNN 2205
++ +Y P N+K P+ YPS+ + ++D+RV L+ IV + K
Sbjct: 556 NYIKRYCPYQNIK-PQ----HYPSIHITAYENDERV----------PLKGIVNYTEKLKE 600
Query: 2206 PLLIHV-DTKAGHGA 2247
+ H DT G+ A
Sbjct: 601 AITEHAKDTGEGYQA 615
>ref|XP_864419.1| PREDICTED: similar to prolyl endopeptidase-like isoform 4 [Canis
familiaris].
Length = 661
Score = 94.7 bits (234), Expect = 4e-19
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Frame = +1
Query: 1534 KDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANI 1713
KDG +PM I HK + P ++ YG + + + N+ R + V G +LA ++
Sbjct: 385 KDGKSVPMTIFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHV 443
Query: 1714 RGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCA 1893
RGGGE G WH G L K N D + + L +G++ P T+ S GG+LV
Sbjct: 444 RGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLVGALC 503
Query: 1894 NQRPDLFGCVIAQVGVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNV 2061
N P+L V + +D+L T + ++G S ++H ++ +Y P N+
Sbjct: 504 NSNPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNI 563
Query: 2062 KLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHV-DTKAG 2238
K P+ YPS+ + ++D+RV L+ IV + K + H DT G
Sbjct: 564 K-PQ----HYPSIHITAYENDERV----------PLKGIVNYTEKLKEAITEHAKDTGEG 608
Query: 2239 HGA 2247
+ A
Sbjct: 609 YQA 611
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 100,097,570
Number of extensions: 2624531
Number of successful extensions: 7282
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 7271
Number of HSP's successfully gapped: 10
Length of query: 858
Length of database: 18,874,504
Length adjustment: 111
Effective length of query: 747
Effective length of database: 15,174,208
Effective search space: 11335133376
Effective search space used: 11335133376
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0037_E11
(2575 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002717.3| prolyl endopeptidase [Homo sapiens]. 1457 0.0
Alignment gi|NP_001165088.1| prolyl endopeptidase-like isoform 4 [Homo sa... 98 4e-20
Alignment gi|NP_001165084.1| prolyl endopeptidase-like isoform 4 [Homo sa... 98 4e-20
Alignment gi|NP_001165077.1| prolyl endopeptidase-like isoform 1 [Homo sa... 98 4e-20
Alignment gi|NP_001165074.1| prolyl endopeptidase-like isoform 1 [Homo sa... 98 4e-20
Alignment gi|NP_006027.2| prolyl endopeptidase-like isoform 1 [Homo sapie... 98 4e-20
Alignment gi|NP_001035844.1| prolyl endopeptidase-like isoform 2 [Homo sa... 95 4e-19
Alignment gi|NP_001035845.1| prolyl endopeptidase-like isoform 3 [Homo sa... 91 4e-18
>ref|NP_002717.3| prolyl endopeptidase [Homo sapiens].
Length = 710
Score = 1457 bits (3772), Expect = 0.0
Identities = 689/710 (97%), Positives = 702/710 (98%)
Frame = +1
Query: 202 MLSFQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 381
MLS QYPDVYRDETA+QDYHGHK+CDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR
Sbjct: 1 MLSLQYPDVYRDETAVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 60
Query: 382 GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILS 561
GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILS
Sbjct: 61 GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILS 120
Query: 562 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTH 741
DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTH
Sbjct: 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTH 180
Query: 742 DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 921
DGKGMFYN+YPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL
Sbjct: 181 DGKGMFYNSYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240
Query: 922 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVF 1101
SDDGRYVLLSIREGCDPVNRLWYCDLQQES+GI GILKWVKLIDNFEGEYDYVTNEGTVF
Sbjct: 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESSGIAGILKWVKLIDNFEGEYDYVTNEGTVF 300
Query: 1102 TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 1281
TFKTNR SPNYR+INIDF DPEESKWKVLVPEHEKDVLEW+ACVRSNFLVLCYLHDVKN
Sbjct: 301 TFKTNRQSPNYRVINIDFRDPEESKWKVLVPEHEKDVLEWIACVRSNFLVLCYLHDVKNI 360
Query: 1282 LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR 1461
LQLHDL TGALLK FPL+VGS+VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR
Sbjct: 361 LQLHDLTTGALLKTFPLDVGSIVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR 420
Query: 1462 VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI 1641
VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI
Sbjct: 421 VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI 480
Query: 1642 TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE 1821
TPNYSVSRLIFVRHMGG+LAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE
Sbjct: 481 TPNYSVSRLIFVRHMGGILAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE 540
Query: 1822 GYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG 2001
GYTSPKRLTINGGSNGGLLVA CANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG
Sbjct: 541 GYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG 600
Query: 2002 CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV 2181
CSDSKQHFEWL+KYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV
Sbjct: 601 CSDSKQHFEWLVKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV 660
Query: 2182 GRSRKQNNPLLIHVDTKAGHGAGEPTAKVIEEVSDMFAFIARCLNIDWIP 2331
GRSRKQ+NPLLIHVDTKAGHGAG+PTAKVIEEVSDMFAFIARCLN+DWIP
Sbjct: 661 GRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNVDWIP 710
>ref|NP_001165088.1| prolyl endopeptidase-like isoform 4 [Homo sapiens].
Length = 638
Score = 97.8 bits (242), Expect = 4e-20
Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 16/430 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ ++I + +W D I G+L +V+
Sbjct: 160 DPSYFVFLYLTKDSRFLTINIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHR 217
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 218 DD---ELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKD-----H 269
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 270 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 319
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + +++ SKDG +PM + HK
Sbjct: 320 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKT 375
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ R + V G +LA ++RGGGE G WH G
Sbjct: 376 DSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQWHADG 434
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + + L +G++ P T+ S GG+L N P+L V +
Sbjct: 435 RLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEA 494
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 495 PFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HYPSIH 549
Query: 2104 LLTADHDDRV 2133
+ ++D+RV
Sbjct: 550 ITAYENDERV 559
>ref|NP_001165084.1| prolyl endopeptidase-like isoform 4 [Homo sapiens].
Length = 638
Score = 97.8 bits (242), Expect = 4e-20
Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 16/430 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ ++I + +W D I G+L +V+
Sbjct: 160 DPSYFVFLYLTKDSRFLTINIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHR 217
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 218 DD---ELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKD-----H 269
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 270 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 319
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + +++ SKDG +PM + HK
Sbjct: 320 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKT 375
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ R + V G +LA ++RGGGE G WH G
Sbjct: 376 DSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQWHADG 434
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + + L +G++ P T+ S GG+L N P+L V +
Sbjct: 435 RLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEA 494
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 495 PFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HYPSIH 549
Query: 2104 LLTADHDDRV 2133
+ ++D+RV
Sbjct: 550 ITAYENDERV 559
>ref|NP_001165077.1| prolyl endopeptidase-like isoform 1 [Homo sapiens].
Length = 727
Score = 97.8 bits (242), Expect = 4e-20
Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 16/430 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ ++I + +W D I G+L +V+
Sbjct: 249 DPSYFVFLYLTKDSRFLTINIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHR 306
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 307 DD---ELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKD-----H 358
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 359 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 408
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + +++ SKDG +PM + HK
Sbjct: 409 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKT 464
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ R + V G +LA ++RGGGE G WH G
Sbjct: 465 DSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQWHADG 523
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + + L +G++ P T+ S GG+L N P+L V +
Sbjct: 524 RLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEA 583
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 584 PFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HYPSIH 638
Query: 2104 LLTADHDDRV 2133
+ ++D+RV
Sbjct: 639 ITAYENDERV 648
>ref|NP_001165074.1| prolyl endopeptidase-like isoform 1 [Homo sapiens].
Length = 727
Score = 97.8 bits (242), Expect = 4e-20
Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 16/430 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ ++I + +W D I G+L +V+
Sbjct: 249 DPSYFVFLYLTKDSRFLTINIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHR 306
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 307 DD---ELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKD-----H 358
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 359 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 408
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + +++ SKDG +PM + HK
Sbjct: 409 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKT 464
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ R + V G +LA ++RGGGE G WH G
Sbjct: 465 DSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQWHADG 523
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + + L +G++ P T+ S GG+L N P+L V +
Sbjct: 524 RLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEA 583
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 584 PFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HYPSIH 638
Query: 2104 LLTADHDDRV 2133
+ ++D+RV
Sbjct: 639 ITAYENDERV 648
>ref|NP_006027.2| prolyl endopeptidase-like isoform 1 [Homo sapiens].
Length = 727
Score = 97.8 bits (242), Expect = 4e-20
Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 16/430 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ ++I + +W D I G+L +V+
Sbjct: 249 DPSYFVFLYLTKDSRFLTINIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHR 306
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 307 DD---ELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKD-----H 358
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 359 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 408
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + +++ SKDG +PM + HK
Sbjct: 409 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKT 464
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ R + V G +LA ++RGGGE G WH G
Sbjct: 465 DSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQWHADG 523
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + + L +G++ P T+ S GG+L N P+L V +
Sbjct: 524 RLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEA 583
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 584 PFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HYPSIH 638
Query: 2104 LLTADHDDRV 2133
+ ++D+RV
Sbjct: 639 ITAYENDERV 648
>ref|NP_001035844.1| prolyl endopeptidase-like isoform 2 [Homo sapiens].
Length = 665
Score = 94.7 bits (234), Expect = 4e-19
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 4/276 (1%)
Frame = +1
Query: 1318 KIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDA 1497
K+ P G ++ + K+ +Q S + P Y T + E ++F E +
Sbjct: 323 KLPPWACGFIMDTNSDPKNCP--FQLCSPIRPPKYY----TYKFAEGKLFEETGHEDPIT 376
Query: 1498 SDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFV 1677
+ +++ SKDG +PM + HK + P ++ YG + + + N+ R + V
Sbjct: 377 KTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLV 436
Query: 1678 RHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTING 1857
G +LA ++RGGGE G WH G L K N D + + L +G++ P T+
Sbjct: 437 DD-GWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTA 495
Query: 1858 GSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHF 2025
S GG+L N P+L V + +D+L T + ++G S ++H
Sbjct: 496 FSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHK 555
Query: 2026 EWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRV 2133
++ +Y P N+K P+ YPS+ + ++D+RV
Sbjct: 556 NYIKRYCPYQNIK-PQ----HYPSIHITAYENDERV 586
>ref|NP_001035845.1| prolyl endopeptidase-like isoform 3 [Homo sapiens].
Length = 661
Score = 91.3 bits (225), Expect = 4e-18
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 4/204 (1%)
Frame = +1
Query: 1534 KDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANI 1713
KDG +PM + HK + P ++ YG + + + N+ R + V G +LA ++
Sbjct: 385 KDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHV 443
Query: 1714 RGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCA 1893
RGGGE G WH G L K N D + + L +G++ P T+ S GG+L
Sbjct: 444 RGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALC 503
Query: 1894 NQRPDLFGCVIAQVGVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNV 2061
N P+L V + +D+L T + ++G S ++H ++ +Y P N+
Sbjct: 504 NSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNI 563
Query: 2062 KLPEADDIQYPSMLLLTADHDDRV 2133
K P+ YPS+ + ++D+RV
Sbjct: 564 K-PQ----HYPSIHITAYENDERV 582
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 98,305,326
Number of extensions: 2589429
Number of successful extensions: 7540
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 7532
Number of HSP's successfully gapped: 8
Length of query: 858
Length of database: 18,297,164
Length adjustment: 111
Effective length of query: 747
Effective length of database: 14,638,160
Effective search space: 10934705520
Effective search space used: 10934705520
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA LVRM1_0037_E11
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0037_E11
(2575 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_777197.1| prolyl endopeptidase [Bos taurus]. 1448 0.0
Alignment gi|XP_001787909.1| PREDICTED: prolyl endopeptidase-like [Bos ta... 96 2e-19
Alignment gi|XP_002691346.1| PREDICTED: prolyl endopeptidase-like [Bos ta... 94 8e-19
Alignment gi|XP_002691345.1| PREDICTED: prolyl endopeptidase-like [Bos ta... 90 1e-17
>ref|NP_777197.1| prolyl endopeptidase [Bos taurus].
Length = 710
Score = 1448 bits (3748), Expect = 0.0
Identities = 690/709 (97%), Positives = 699/709 (98%)
Frame = +1
Query: 202 MLSFQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 381
MLSFQYPDVYRDETA+QDYHGHK+CDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR
Sbjct: 1 MLSFQYPDVYRDETAVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 60
Query: 382 GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILS 561
GLYKERMTELYDYPKYSC+FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARV LDPN LS
Sbjct: 61 GLYKERMTELYDYPKYSCNFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVCLDPNTLS 120
Query: 562 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTH 741
DDGTVALRGYAFSEDGEY AYGLSASGSDWVTIKFMKVDGAKEL DVLERVKFSCMAWTH
Sbjct: 121 DDGTVALRGYAFSEDGEYVAYGLSASGSDWVTIKFMKVDGAKELADVLERVKFSCMAWTH 180
Query: 742 DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 921
DGKGMFYNAYPQQDGKSDGTETSTNLHQKL YHVLGTDQSEDILCAEFPDEPKWMGGAEL
Sbjct: 181 DGKGMFYNAYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240
Query: 922 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVF 1101
SDDGRYVLLSIREGCDPVNRLWYCDL QE NGITGILKWVKLIDNFEGEYDYVTNEGTVF
Sbjct: 241 SDDGRYVLLSIREGCDPVNRLWYCDLHQEPNGITGILKWVKLIDNFEGEYDYVTNEGTVF 300
Query: 1102 TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 1281
TFKTNRHSPNYRLINIDFTDPEES+WKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT
Sbjct: 301 TFKTNRHSPNYRLINIDFTDPEESRWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360
Query: 1282 LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR 1461
LQLHD+ATGALLK FPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR
Sbjct: 361 LQLHDMATGALLKTFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR 420
Query: 1462 VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI 1641
VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI
Sbjct: 421 VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI 480
Query: 1642 TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE 1821
TPNYSV RLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE
Sbjct: 481 TPNYSVCRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE 540
Query: 1822 GYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG 2001
GYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG
Sbjct: 541 GYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG 600
Query: 2002 CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV 2181
CSD+KQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHS KFIATLQ++V
Sbjct: 601 CSDNKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSPKFIATLQHLV 660
Query: 2182 GRSRKQNNPLLIHVDTKAGHGAGEPTAKVIEEVSDMFAFIARCLNIDWI 2328
GRSRKQNNPLLIHVDTKAGHGAG+PTAKVIEEVSDMFAFIARCLNIDWI
Sbjct: 661 GRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDWI 709
>ref|XP_001787909.1| PREDICTED: prolyl endopeptidase-like [Bos taurus].
Length = 686
Score = 95.9 bits (237), Expect = 2e-19
Identities = 98/381 (25%), Positives = 166/381 (43%), Gaps = 9/381 (2%)
Frame = +1
Query: 1018 ITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVP 1194
I G+L +V+ D+ E +TN G FK R + + ++N D + KV+
Sbjct: 255 IHGVLYYVEHRDD---ELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVVDL 311
Query: 1195 EHEKDVLEWVACV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSG 1362
+ KD CV SN L + N + L D + +L K+ P G ++ +
Sbjct: 312 DMFKD-----HCVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIIDTNS 358
Query: 1363 QKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDG 1542
K+ +Q S + P Y T + E ++F E + + +++ SKDG
Sbjct: 359 DPKNCP--FQLCSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRMEAKSKDG 412
Query: 1543 TKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGG 1722
+PM + HK + P + YG + + + N+ R + V G +LA ++RGG
Sbjct: 413 KLVPMTVFHKTDSEDLQKKPLLVQVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGG 471
Query: 1723 GEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQR 1902
GE G WH G L K N D + + L +G++ P + S GG+LV N
Sbjct: 472 GELGLQWHADGRLTKKLNGLADLEACIKTLHDQGFSQPSLTALTAFSAGGVLVGALCNSS 531
Query: 1903 PDLFGCVIAQVGVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLP 2070
P+L V + +D+L T + ++G S + H ++ +Y P N+K P
Sbjct: 532 PELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDENHKNYIKRYCPCQNIK-P 590
Query: 2071 EADDIQYPSMLLLTADHDDRV 2133
+ YPS+ + ++D+RV
Sbjct: 591 Q----HYPSIHITAYENDERV 607
>ref|XP_002691346.1| PREDICTED: prolyl endopeptidase-like [Bos taurus].
Length = 665
Score = 93.6 bits (231), Expect = 8e-19
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 4/276 (1%)
Frame = +1
Query: 1318 KIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDA 1497
K+ P G ++ + K+ +Q S + P Y T + E ++F E +
Sbjct: 323 KLPPWACGFIIDTNSDPKNCP--FQLCSPIRPPKYY----TYKFAEGKLFEETGHEDPIT 376
Query: 1498 SDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFV 1677
+ +++ SKDG +PM + HK + P + YG + + + N+ R + V
Sbjct: 377 KTSRVLRMEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVQVYGAYGMDLKMNFRPERRVLV 436
Query: 1678 RHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTING 1857
G +LA ++RGGGE G WH G L K N D + + L +G++ P +
Sbjct: 437 DD-GWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHDQGFSQPSLTALTA 495
Query: 1858 GSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHF 2025
S GG+LV N P+L V + +D+L T + ++G S + H
Sbjct: 496 FSAGGVLVGALCNSSPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDENHK 555
Query: 2026 EWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRV 2133
++ +Y P N+K P+ YPS+ + ++D+RV
Sbjct: 556 NYIKRYCPCQNIK-PQ----HYPSIHITAYENDERV 586
>ref|XP_002691345.1| PREDICTED: prolyl endopeptidase-like [Bos taurus].
Length = 661
Score = 89.7 bits (221), Expect = 1e-17
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
Frame = +1
Query: 1534 KDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANI 1713
KDG +PM + HK + P + YG + + + N+ R + V G +LA ++
Sbjct: 385 KDGKLVPMTVFHKTDSEDLQKKPLLVQVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHV 443
Query: 1714 RGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCA 1893
RGGGE G WH G L K N D + + L +G++ P + S GG+LV
Sbjct: 444 RGGGELGLQWHADGRLTKKLNGLADLEACIKTLHDQGFSQPSLTALTAFSAGGVLVGALC 503
Query: 1894 NQRPDLFGCVIAQVGVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNV 2061
N P+L V + +D+L T + ++G S + H ++ +Y P N+
Sbjct: 504 NSSPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDENHKNYIKRYCPCQNI 563
Query: 2062 KLPEADDIQYPSMLLLTADHDDRV 2133
K P+ YPS+ + ++D+RV
Sbjct: 564 K-PQ----HYPSIHITAYENDERV 582
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 95,887,756
Number of extensions: 2555509
Number of successful extensions: 7148
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 7142
Number of HSP's successfully gapped: 4
Length of query: 858
Length of database: 17,681,374
Length adjustment: 111
Effective length of query: 747
Effective length of database: 14,008,606
Effective search space: 10464428682
Effective search space used: 10464428682
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0037_E11
(2575 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_035286.1| prolyl endopeptidase [Mus musculus]. 1437 0.0
Alignment gi|NP_001157096.1| prolyl endopeptidase-like isoform b [Mus mus... 99 2e-20
Alignment gi|NP_001157095.1| prolyl endopeptidase-like isoform b [Mus mus... 99 2e-20
Alignment gi|NP_666096.3| prolyl endopeptidase-like isoform b [Mus muscul... 99 2e-20
Alignment gi|NP_001157094.1| prolyl endopeptidase-like isoform a [Mus mus... 99 2e-20
>ref|NP_035286.1| prolyl endopeptidase [Mus musculus].
Length = 710
Score = 1437 bits (3721), Expect = 0.0
Identities = 679/709 (95%), Positives = 700/709 (98%)
Frame = +1
Query: 202 MLSFQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 381
MLSFQYPDVYRDET++Q+YHGHK+CDPY+WLEDPDSEQTKAFVEAQNKITVPFLEQCPIR
Sbjct: 1 MLSFQYPDVYRDETSVQEYHGHKICDPYSWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 60
Query: 382 GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILS 561
GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPN LS
Sbjct: 61 GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNTLS 120
Query: 562 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTH 741
DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKF+CMAWTH
Sbjct: 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFTCMAWTH 180
Query: 742 DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 921
DGKGMFYN+YPQQDGKSDGTETSTNLHQKL YHVLGTDQSEDILCAEFPDEPKWMGGAEL
Sbjct: 181 DGKGMFYNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240
Query: 922 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVF 1101
SDDGRYVLLSI EGCDPVNRLWYCDLQQE NGITGILKWVKLIDNFEGEYDYVTNEGTVF
Sbjct: 241 SDDGRYVLLSIWEGCDPVNRLWYCDLQQEPNGITGILKWVKLIDNFEGEYDYVTNEGTVF 300
Query: 1102 TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 1281
TFKTNR+SPNYRLINIDFTDP+ESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN
Sbjct: 301 TFKTNRNSPNYRLINIDFTDPDESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNI 360
Query: 1282 LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR 1461
LQLHDL TGALLK FPL+VGSVVGYSG+KKD+EIFYQFTSFLSPG+IYHCDLTKEELEP
Sbjct: 361 LQLHDLTTGALLKTFPLDVGSVVGYSGRKKDSEIFYQFTSFLSPGVIYHCDLTKEELEPM 420
Query: 1462 VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI 1641
VFREVTVKGIDA+DYQT+QIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI
Sbjct: 421 VFREVTVKGIDAADYQTIQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI 480
Query: 1642 TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE 1821
TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE
Sbjct: 481 TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE 540
Query: 1822 GYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG 2001
GYTSPKRLTINGGSNGGLLVA CANQRPDLFGCVIAQVGVMDMLKFHK+TIGHAWTTDYG
Sbjct: 541 GYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMDMLKFHKFTIGHAWTTDYG 600
Query: 2002 CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV 2181
CSD+KQHFEWL+KYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV
Sbjct: 601 CSDTKQHFEWLLKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV 660
Query: 2182 GRSRKQNNPLLIHVDTKAGHGAGEPTAKVIEEVSDMFAFIARCLNIDWI 2328
GRSRKQ+NPLLIHVDTKAGHGAG+PTAKVIEEVSDMFAFIARCLNI+WI
Sbjct: 661 GRSRKQSNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIEWI 709
>ref|NP_001157096.1| prolyl endopeptidase-like isoform b [Mus musculus].
Length = 638
Score = 98.6 bits (244), Expect = 2e-20
Identities = 107/430 (24%), Positives = 186/430 (43%), Gaps = 16/430 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ L+I + +W D I G+L +V+
Sbjct: 160 DPSYFVFLYLTKDSRFLTLNIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGMLYYVEHR 217
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 218 DD---ELYILTNVGEPTEFKLMRTAADAPAIMNWDLFFTMKRNTKVVDLDMFKD-----H 269
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 270 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 319
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + ++I SKDG +PM + HK
Sbjct: 320 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRIEAKSKDGKLVPMTVFHKT 375
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ + + V G +LA ++RGGGE G WH G
Sbjct: 376 DSEDLQRKPLLVHVYGAYGMDLKMNFRPEKRVLVDD-GWILAYCHVRGGGELGLQWHADG 434
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + L +G++ P T++ S GG+LV N +P+L V +
Sbjct: 435 RLTKKLNGLADLVACIKTLHSQGFSQPSLTTLSAFSAGGVLVGALCNSKPELLRAVTLEA 494
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 495 PFLDVLNTMLDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPCQNIK-PQ----HYPSVH 549
Query: 2104 LLTADHDDRV 2133
+ ++D+RV
Sbjct: 550 ITAYENDERV 559
>ref|NP_001157095.1| prolyl endopeptidase-like isoform b [Mus musculus].
Length = 638
Score = 98.6 bits (244), Expect = 2e-20
Identities = 107/430 (24%), Positives = 186/430 (43%), Gaps = 16/430 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ L+I + +W D I G+L +V+
Sbjct: 160 DPSYFVFLYLTKDSRFLTLNIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGMLYYVEHR 217
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 218 DD---ELYILTNVGEPTEFKLMRTAADAPAIMNWDLFFTMKRNTKVVDLDMFKD-----H 269
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 270 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 319
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + ++I SKDG +PM + HK
Sbjct: 320 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRIEAKSKDGKLVPMTVFHKT 375
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ + + V G +LA ++RGGGE G WH G
Sbjct: 376 DSEDLQRKPLLVHVYGAYGMDLKMNFRPEKRVLVDD-GWILAYCHVRGGGELGLQWHADG 434
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + L +G++ P T++ S GG+LV N +P+L V +
Sbjct: 435 RLTKKLNGLADLVACIKTLHSQGFSQPSLTTLSAFSAGGVLVGALCNSKPELLRAVTLEA 494
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 495 PFLDVLNTMLDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPCQNIK-PQ----HYPSVH 549
Query: 2104 LLTADHDDRV 2133
+ ++D+RV
Sbjct: 550 ITAYENDERV 559
>ref|NP_666096.3| prolyl endopeptidase-like isoform b [Mus musculus].
Length = 638
Score = 98.6 bits (244), Expect = 2e-20
Identities = 107/430 (24%), Positives = 186/430 (43%), Gaps = 16/430 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ L+I + +W D I G+L +V+
Sbjct: 160 DPSYFVFLYLTKDSRFLTLNIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGMLYYVEHR 217
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 218 DD---ELYILTNVGEPTEFKLMRTAADAPAIMNWDLFFTMKRNTKVVDLDMFKD-----H 269
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 270 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 319
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + ++I SKDG +PM + HK
Sbjct: 320 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRIEAKSKDGKLVPMTVFHKT 375
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ + + V G +LA ++RGGGE G WH G
Sbjct: 376 DSEDLQRKPLLVHVYGAYGMDLKMNFRPEKRVLVDD-GWILAYCHVRGGGELGLQWHADG 434
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + L +G++ P T++ S GG+LV N +P+L V +
Sbjct: 435 RLTKKLNGLADLVACIKTLHSQGFSQPSLTTLSAFSAGGVLVGALCNSKPELLRAVTLEA 494
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 495 PFLDVLNTMLDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPCQNIK-PQ----HYPSVH 549
Query: 2104 LLTADHDDRV 2133
+ ++D+RV
Sbjct: 550 ITAYENDERV 559
>ref|NP_001157094.1| prolyl endopeptidase-like isoform a [Mus musculus].
Length = 725
Score = 98.6 bits (244), Expect = 2e-20
Identities = 107/430 (24%), Positives = 186/430 (43%), Gaps = 16/430 (3%)
Frame = +1
Query: 892 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SNGITGILKWVKLI 1050
+P + L+ D R++ L+I + +W D I G+L +V+
Sbjct: 247 DPSYFVFLYLTKDSRFLTLNIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGMLYYVEHR 304
Query: 1051 DNFEGEYDYVTNEGTVFTFKTNRHSPNY-RLINIDFTDPEESKWKVLVPEHEKDVLEWVA 1227
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 305 DD---ELYILTNVGEPTEFKLMRTAADAPAIMNWDLFFTMKRNTKVVDLDMFKD-----H 356
Query: 1228 CV----RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 1395
CV SN L + N + L D + +L K+ P G ++ + K+ +Q
Sbjct: 357 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 406
Query: 1396 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 1575
S + P Y T + E ++F E + + ++I SKDG +PM + HK
Sbjct: 407 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRIEAKSKDGKLVPMTVFHKT 462
Query: 1576 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGG 1755
+ P ++ YG + + + N+ + + V G +LA ++RGGGE G WH G
Sbjct: 463 DSEDLQRKPLLVHVYGAYGMDLKMNFRPEKRVLVDD-GWILAYCHVRGGGELGLQWHADG 521
Query: 1756 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQV 1935
L K N D + L +G++ P T++ S GG+LV N +P+L V +
Sbjct: 522 RLTKKLNGLADLVACIKTLHSQGFSQPSLTTLSAFSAGGVLVGALCNSKPELLRAVTLEA 581
Query: 1936 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSML 2103
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 582 PFLDVLNTMLDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPCQNIK-PQ----HYPSVH 636
Query: 2104 LLTADHDDRV 2133
+ ++D+RV
Sbjct: 637 ITAYENDERV 646
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 83,761,498
Number of extensions: 2194688
Number of successful extensions: 6342
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 6329
Number of HSP's successfully gapped: 5
Length of query: 858
Length of database: 15,617,559
Length adjustment: 110
Effective length of query: 748
Effective length of database: 12,313,599
Effective search space: 9210572052
Effective search space used: 9210572052
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0037_E11
(2575 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001004050.1| prolyl endopeptidase [Sus scrofa]. 1484 0.0
Alignment gi|XP_003361357.1| PREDICTED: prolyl endopeptidase-like [Sus sc... 395 e-110
>ref|NP_001004050.1| prolyl endopeptidase [Sus scrofa].
Length = 710
Score = 1484 bits (3843), Expect = 0.0
Identities = 709/710 (99%), Positives = 710/710 (100%)
Frame = +1
Query: 202 MLSFQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 381
MLSFQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR
Sbjct: 1 MLSFQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 60
Query: 382 GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILS 561
GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILS
Sbjct: 61 GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILS 120
Query: 562 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTH 741
DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTH
Sbjct: 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTH 180
Query: 742 DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 921
DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL
Sbjct: 181 DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240
Query: 922 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVF 1101
SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVF
Sbjct: 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVF 300
Query: 1102 TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 1281
TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT
Sbjct: 301 TFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360
Query: 1282 LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR 1461
LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR
Sbjct: 361 LQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR 420
Query: 1462 VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI 1641
VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI
Sbjct: 421 VFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISI 480
Query: 1642 TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE 1821
TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE
Sbjct: 481 TPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKE 540
Query: 1822 GYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG 2001
GYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG
Sbjct: 541 GYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYG 600
Query: 2002 CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV 2181
CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV
Sbjct: 601 CSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIV 660
Query: 2182 GRSRKQNNPLLIHVDTKAGHGAGEPTAKVIEEVSDMFAFIARCLNIDWIP 2331
GRSRKQNNPLLIHVDTKAGHGAG+PTAKVIEEVSDMFAFIARCLNIDWIP
Sbjct: 661 GRSRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDWIP 710
>ref|XP_003361357.1| PREDICTED: prolyl endopeptidase-like [Sus scrofa].
Length = 268
Score = 395 bits (1014), Expect = e-110
Identities = 185/185 (100%), Positives = 185/185 (100%)
Frame = +1
Query: 247 IQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPK 426
IQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPK
Sbjct: 72 IQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPK 131
Query: 427 YSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSED 606
YSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSED
Sbjct: 132 YSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSED 191
Query: 607 GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDG 786
GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDG
Sbjct: 192 GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDG 251
Query: 787 KSDGT 801
KSDGT
Sbjct: 252 KSDGT 256
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 61,848,149
Number of extensions: 1660994
Number of successful extensions: 4761
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4760
Number of HSP's successfully gapped: 2
Length of query: 858
Length of database: 11,343,932
Length adjustment: 108
Effective length of query: 750
Effective length of database: 8,655,056
Effective search space: 6491292000
Effective search space used: 6491292000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0037_E11
(2575 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr01 1005 0.0
gb|GL894097.2| Sus scrofa unplaced genomic scaffold ChrUScaf1981 422 e-115
Sscrofa_Chr17 123 5e-25
>Sscrofa_Chr01
|| Length = 315321322
Score = 1005 bits (507), Expect = 0.0
Identities = 510/511 (99%)
Strand = Plus / Minus
Query: 2040 atattctccgttgcacaacgttaagctgccagaggcagacgacatccagtacccatccat 2099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80817752 atattctccgttgcacaacgttaagctgccagaggcagacgacatccagtacccatccat 80817693
Query: 2100 gcttctcctcaccgccgaccacgatgaccgagtggtcccgcttcactccctcaagttcat 2159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80817692 gcttctcctcaccgccgaccacgatgaccgagtggtcccgcttcactccctcaagttcat 80817633
Query: 2160 tgccacccttcagtacatcgtgggccgcagccggaagcagaacaaccctctgcttatcca 2219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80817632 tgccacccttcagtacatcgtgggccgcagccggaagcagaacaaccctctgcttatcca 80817573
Query: 2220 cgtggacaccaaggcgggccacggggcaggagagcccacagccaaagtgatagaagaagt 2279
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 80817572 cgtggacaccaaggcgggccacggggcaggaaagcccacagccaaagtgatagaagaagt 80817513
Query: 2280 ctctgacatgttcgccttcatagcgcggtgcctgaacatcgactggattccgtaactgac 2339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80817512 ctctgacatgttcgccttcatagcgcggtgcctgaacatcgactggattccgtaactgac 80817453
Query: 2340 attcccactcctccagctgcggaaaacctcaagggctgtcccgccattaaaacggagaaa 2399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80817452 attcccactcctccagctgcggaaaacctcaagggctgtcccgccattaaaacggagaaa 80817393
Query: 2400 ccactggacgtcacgcttccccacacgaacactcagcctgcactcagactgcagttgaac 2459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80817392 ccactggacgtcacgcttccccacacgaacactcagcctgcactcagactgcagttgaac 80817333
Query: 2460 agaactgcctcggggattttatcttttctaggcttctcctttttaactggcccttggcgt 2519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80817332 agaactgcctcggggattttatcttttctaggcttctcctttttaactggcccttggcgt 80817273
Query: 2520 ttcttttccgccctgtgcaggcacatgtttt 2550
|||||||||||||||||||||||||||||||
Sbjct: 80817272 ttcttttccgccctgtgcaggcacatgtttt 80817242
Score = 400 bits (202), Expect = e-108
Identities = 202/202 (100%)
Strand = Plus / Minus
Query: 1215 agaatgggtggcttgcgtcaggtccaactttttggtgctgtgctacctccatgatgtgaa 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80873028 agaatgggtggcttgcgtcaggtccaactttttggtgctgtgctacctccatgatgtgaa 80872969
Query: 1275 gaataccttgcagcttcacgacctggccactggtgctctcctcaagatcttcccgctcga 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80872968 gaataccttgcagcttcacgacctggccactggtgctctcctcaagatcttcccgctcga 80872909
Query: 1335 ggtcggcagtgtcgtgggctacagcggtcagaagaaggacacggaaatcttctatcagtt 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80872908 ggtcggcagtgtcgtgggctacagcggtcagaagaaggacacggaaatcttctatcagtt 80872849
Query: 1395 tacttcctttttatctccaggt 1416
||||||||||||||||||||||
Sbjct: 80872848 tacttcctttttatctccaggt 80872827
Score = 375 bits (189), Expect = e-101
Identities = 192/193 (99%)
Strand = Plus / Minus
Query: 1024 ggaatcctgaagtgggtaaaactgatcgacaacttcgaaggagaatatgactacgtgacc 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80877326 ggaatcctgaagtgggtaaaactgatcgacaacttcgaaggagaatatgactacgtgacc 80877267
Query: 1084 aacgagggcacggtcttcacgttcaagacaaaccgccattctcccaactaccgcctgatc 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80877266 aacgagggcacggtcttcacgttcaagacaaaccgccattctcccaactaccgcctgatc 80877207
Query: 1144 aacattgacttcacggatcccgaggagtccaagtggaaggtgcttgtgcctgagcacgag 1203
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 80877206 aacattgacttcacggatcccgaggagtccaagtggaaggtgctcgtgcctgagcacgag 80877147
Query: 1204 aaggacgtcttag 1216
|||||||||||||
Sbjct: 80877146 aaggacgtcttag 80877134
Score = 317 bits (160), Expect = 2e-83
Identities = 160/160 (100%)
Strand = Plus / Minus
Query: 1880 tagctacttgtgcaaatcaacgacctgacctctttggttgtgttattgctcaagttggag 1939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80820825 tagctacttgtgcaaatcaacgacctgacctctttggttgtgttattgctcaagttggag 80820766
Query: 1940 taatggacatgctgaagttccataaatataccattggtcatgcctggaccaccgattatg 1999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80820765 taatggacatgctgaagttccataaatataccattggtcatgcctggaccaccgattatg 80820706
Query: 2000 ggtgctcggacagcaaacaacactttgaatggctcatcaa 2039
||||||||||||||||||||||||||||||||||||||||
Sbjct: 80820705 ggtgctcggacagcaaacaacactttgaatggctcatcaa 80820666
Score = 276 bits (139), Expect = 6e-71
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 1517 agattttctaccctagcaaggatggtacaaagatccccatgttcatcgtccataaaaagg 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80837748 agattttctaccctagcaaggatggtacaaagatccccatgttcatcgtccataaaaagg 80837689
Query: 1577 gcataaaattggatggctctcatcctgccttcctctacggctacggcggcttcaacatat 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80837688 gcataaaattggatggctctcatcctgccttcctctacggctacggcggcttcaacatat 80837629
Query: 1637 ccatcactcccaactacag 1655
|||||||||||||||||||
Sbjct: 80837628 ccatcactcccaactacag 80837610
Score = 266 bits (134), Expect = 6e-68
Identities = 134/134 (100%)
Strand = Plus / Minus
Query: 1749 aggtggtatcttggccaataaacagaactgctttgatgactttcagtgtgctgctgaata 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80831954 aggtggtatcttggccaataaacagaactgctttgatgactttcagtgtgctgctgaata 80831895
Query: 1809 tcttatcaaggaaggttacacatctcccaagaggctaactattaacggaggttcaaatgg 1868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80831894 tcttatcaaggaaggttacacatctcccaagaggctaactattaacggaggttcaaatgg 80831835
Query: 1869 aggcctcttagtag 1882
||||||||||||||
Sbjct: 80831834 aggcctcttagtag 80831821
Score = 216 bits (109), Expect = 5e-53
Identities = 109/109 (100%)
Strand = Plus / Minus
Query: 917 agttatccgacgatggtcgctacgtcttgttgtcaataagggagggctgcgacccagtga 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80892385 agttatccgacgatggtcgctacgtcttgttgtcaataagggagggctgcgacccagtga 80892326
Query: 977 accgactctggtactgtgacctgcagcaggagtccaatggcatcaccgg 1025
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80892325 accgactctggtactgtgacctgcagcaggagtccaatggcatcaccgg 80892277
Score = 210 bits (106), Expect = 3e-51
Identities = 106/106 (100%)
Strand = Plus / Minus
Query: 1413 aggtatcatttatcactgtgatctgaccaaagaagaactggagccaagagtgttccgcga 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80866926 aggtatcatttatcactgtgatctgaccaaagaagaactggagccaagagtgttccgcga 80866867
Query: 1473 ggtgacggtgaaaggaattgatgcttccgattaccagacggtccag 1518
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80866866 ggtgacggtgaaaggaattgatgcttccgattaccagacggtccag 80866821
Score = 200 bits (101), Expect = 3e-48
Identities = 101/101 (100%)
Strand = Plus / Minus
Query: 1653 cagtgtgtccaggctcatctttgtgaggcacatgggtggtgtccttgcagtggccaacat 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80835008 cagtgtgtccaggctcatctttgtgaggcacatgggtggtgtccttgcagtggccaacat 80834949
Query: 1713 ccgaggaggcggcgaatacggagagacgtggcacaaaggtg 1753
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 80834948 ccgaggaggcggcgaatacggagagacgtggcacaaaggtg 80834908
Score = 151 bits (76), Expect = 2e-33
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 247 atccaggattatcatggacataaagtctgtgacccttacgcttggcttgaagacccagac 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80954973 atccaggattatcatggacataaagtctgtgacccttacgcttggcttgaagacccagac 80954914
Query: 307 agcgagcagacgaagg 322
||||||||||||||||
Sbjct: 80954913 agcgagcagacgaagg 80954898
>gb|GL894097.2| Sus scrofa unplaced genomic scaffold ChrUScaf1981
Length = 86842
Score = 422 bits (213), Expect = e-115
Identities = 213/213 (100%)
Strand = Plus / Minus
Query: 585 aggctatgcattcagtgaagatggtgaatattttgcatatggtctgagtgccagcggctc 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21109 aggctatgcattcagtgaagatggtgaatattttgcatatggtctgagtgccagcggctc 21050
Query: 645 agactgggtgacgatcaagttcatgaaagtcgatggtgccaaagagcttccggatgtgct 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21049 agactgggtgacgatcaagttcatgaaagtcgatggtgccaaagagcttccggatgtgct 20990
Query: 705 tgaaagagtcaagttcagctgtatggcctggacccatgatgggaagggaatgttctacaa 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20989 tgaaagagtcaagttcagctgtatggcctggacccatgatgggaagggaatgttctacaa 20930
Query: 765 tgcatacccccaacaggatgggaaaagtgatgg 797
|||||||||||||||||||||||||||||||||
Sbjct: 20929 tgcatacccccaacaggatgggaaaagtgatgg 20897
Score = 264 bits (133), Expect = 2e-67
Identities = 133/133 (100%)
Strand = Plus / Minus
Query: 455 ggtatttctatttttacaatacaggtttgcagaaccaacgagtattatatgtacaggatt 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26917 ggtatttctatttttacaatacaggtttgcagaaccaacgagtattatatgtacaggatt 26858
Query: 515 ccttagagggggaagccagagtgttcctcgaccccaacatactctctgatgacggcacgg 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26857 ccttagagggggaagccagagtgttcctcgaccccaacatactctctgatgacggcacgg 26798
Query: 575 tggcactccgagg 587
|||||||||||||
Sbjct: 26797 tggcactccgagg 26785
Score = 242 bits (122), Expect = 8e-61
Identities = 122/122 (100%)
Strand = Plus / Minus
Query: 320 aggctttcgtggaagcccagaacaagatcactgtgccatttcttgagcagtgtcctatca 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28204 aggctttcgtggaagcccagaacaagatcactgtgccatttcttgagcagtgtcctatca 28145
Query: 380 gaggtttatacaaagagaggatgactgaattgtatgactaccccaagtatagttgccact 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28144 gaggtttatacaaagagaggatgactgaattgtatgactaccccaagtatagttgccact 28085
Query: 440 tc 441
||
Sbjct: 28084 tc 28083
Score = 202 bits (102), Expect = 7e-49
Identities = 102/102 (100%)
Strand = Plus / Minus
Query: 817 ctccaccaaaagctctactaccatgtcttgggaaccgatcagtcagaagatattttgtgt 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16068 ctccaccaaaagctctactaccatgtcttgggaaccgatcagtcagaagatattttgtgt 16009
Query: 877 gctgagtttcctgatgagcctaagtggatgggtggagctgag 918
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16008 gctgagtttcctgatgagcctaagtggatgggtggagctgag 15967
Score = 151 bits (76), Expect = 2e-33
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 247 atccaggattatcatggacataaagtctgtgacccttacgcttggcttgaagacccagac 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48158 atccaggattatcatggacataaagtctgtgacccttacgcttggcttgaagacccagac 48099
Query: 307 agcgagcagacgaagg 322
||||||||||||||||
Sbjct: 48098 agcgagcagacgaagg 48083
>Sscrofa_Chr17
|| Length = 69701581
Score = 123 bits (62), Expect = 5e-25
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 954 aagggagggctgcgacccagtgaaccgactctggtactgtgacctgcagcaggagtccaa 1013
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4706787 aaggaagggctgcgacccagtgaactgactctggtactgtgacctgcagcaggagtccaa 4706728
Query: 1014 tggcatcaccggaa 1027
|||||||||||||
Sbjct: 4706727 cggcatcaccggaa 4706714
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 61,324,897
Number of extensions: 244
Number of successful extensions: 244
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 244
Number of HSP's successfully gapped: 16
Length of query: 2575
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2553
Effective length of database: 2,808,408,574
Effective search space: 7169867089422
Effective search space used: 7169867089422
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)