Animal-Genome cDNA LVRM1_0081_E01

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVRM1_0081_E01
         (3424 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_057913.2| complement component 6 [Mus musculus].              1204   0.0  
Alignment   gi|NP_001230766.1| complement component C7 [Mus musculus].           429   e-120
Alignment   gi|NP_666260.1| complement component C8 alpha chain precursor [...   295   2e-79
Alignment   gi|NP_598643.1| complement component C8 beta chain precursor [M...   264   4e-70
Alignment   gi|NP_038513.1| complement component C9 [Mus musculus].              207   3e-53
Alignment   gi|NP_035203.3| perforin-1 precursor [Mus musculus].                  80   1e-14
Alignment   gi|NP_694775.1| netrin receptor UNC5D precursor [Mus musculus].       63   1e-09
Alignment   gi|NP_033498.1| netrin receptor UNC5C precursor [Mus musculus].       63   2e-09
Alignment   gi|NP_073725.2| sushi, von Willebrand factor type A, EGF and pe...    63   2e-09
Alignment   gi|NP_033180.2| semaphorin-5A [Mus musculus].                         62   4e-09

>ref|NP_057913.2| complement component 6 [Mus musculus].
          Length = 769

 Score = 1204 bits (3116), Expect = 0.0
 Identities = 558/763 (73%), Positives = 633/763 (82%)
 Frame = +2

Query: 293  MDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGXXXXXXXXXXNQYYLDNF 472
            M +H  L FILL  LIDKS+ACFCDHYPWT WSSCSK+CNSG          N YY  N 
Sbjct: 1    MTRHLTLCFILLVMLIDKSEACFCDHYPWTHWSSCSKSCNSGTQSRQRQVVVNDYYWKNL 60

Query: 473  CDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEP 652
            CD+LC KQETRECN QTCPINC+LGDYG WSDCDPC EKQ KV+S+L P+QFGGQPCTEP
Sbjct: 61   CDKLCIKQETRECNLQTCPINCVLGDYGTWSDCDPCTEKQVKVKSVLRPSQFGGQPCTEP 120

Query: 653  LMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVC 832
            L+TF+PC+PSKLCKIEE +CKNKF CDSGRCI SKLECNGENDCGDNSDERNCGRTK VC
Sbjct: 121  LVTFQPCVPSKLCKIEETNCKNKFLCDSGRCIPSKLECNGENDCGDNSDERNCGRTKPVC 180

Query: 833  SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVD 1012
            +R Y PIPSVQLMG GFH LAGEPRGEVL NSFTGGICK VK+S+ASNP+RV ANLENV+
Sbjct: 181  TRIYTPIPSVQLMGTGFHFLAGEPRGEVLDNSFTGGICKLVKTSRASNPYRVSANLENVN 240

Query: 1013 FEVQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFK 1192
            FEVQT            LI  E +K++ +    +    F +PIF+            AF 
Sbjct: 241  FEVQTIEDDLKTEFYKNLISFEKNKNEDSLSVDERTKFFPIPIFHFSEKNEHSHYSSAFN 300

Query: 1193 QAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDD 1372
            + I+ASHKKDSSFIRIHK+IKVLNFTMK  DLQLSDVFLKAL HLPLEYN+A+YSRIFDD
Sbjct: 301  KVIKASHKKDSSFIRIHKLIKVLNFTMKATDLQLSDVFLKALVHLPLEYNSAVYSRIFDD 360

Query: 1373 FGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRC 1552
            FGTHYFTSGSLGG YDL+YQFS +EL+NSGLT+EEA+NC++ ETKK  F+  +   E  C
Sbjct: 361  FGTHYFTSGSLGGKYDLIYQFSRQELQNSGLTEEEAQNCVQYETKKLKFLYMEIHKEDTC 420

Query: 1553 TTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKENP 1732
            T N++SEKY GSFLQGSEKSISLV+GGRS+ AAALAWEKG+SGP E  YSEWLESVKENP
Sbjct: 421  TKNKLSEKYGGSFLQGSEKSISLVQGGRSQQAAALAWEKGTSGPEENVYSEWLESVKENP 480

Query: 1733 AVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECL 1912
            AV+D++LAPITDLVRNIPCAVT+RNNLRRA +EYAAKFDPCQCAPCPNNGRP LSGTECL
Sbjct: 481  AVVDYKLAPITDLVRNIPCAVTKRNNLRRALQEYAAKFDPCQCAPCPNNGRPRLSGTECL 540

Query: 1913 CVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKP 2092
            CVCQSGTYG+NCERR+P YKS+AVDGNWGCWSSWS C+A Y+RSRTRECNNPAP++GG+ 
Sbjct: 541  CVCQSGTYGENCERRSPGYKSDAVDGNWGCWSSWSACNAAYRRSRTRECNNPAPQRGGQS 600

Query: 2093 CDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNEKT 2272
            C G+ +QEE CT SIM+N GQPCI DDE+MKE+DL E E++SGC QP  PEN F  NEK 
Sbjct: 601  CGGKDQQEEDCTVSIMENVGQPCINDDEEMKEVDLAEPEAESGCSQPPLPENAFTWNEKK 660

Query: 2273 LYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQR 2452
            LYSVGE+VEI CLTGF  VG+QY RCLPDRTW +GDVECQRT CL PVV +VL +SPFQR
Sbjct: 661  LYSVGEEVEISCLTGFTAVGFQYLRCLPDRTWSQGDVECQRTSCLKPVVQDVLTISPFQR 720

Query: 2453 LYKIGDSIELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQ 2581
            +Y+IG+SIEL+CP+GFV+AGPSRYTC  DSWTPPIS+SLTCEQ
Sbjct: 721  VYQIGESIELTCPRGFVVAGPSRYTCKEDSWTPPISNSLTCEQ 763


>ref|NP_001230766.1| complement component C7 [Mus musculus].
          Length = 845

 Score =  429 bits (1104), Expect = e-120
 Identities = 267/866 (30%), Positives = 411/866 (47%), Gaps = 18/866 (2%)
 Frame = +2

Query: 527  PINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEV 706
            P+NC    YGPWS+C+ C + Q + RS+    Q+GG PC       + C P + C  EE 
Sbjct: 25   PVNCKWDSYGPWSECNGCTKTQTRRRSVAVYGQYGGYPCEGSAFETQSCKPERGCPTEE- 83

Query: 707  DCKNKFRCDSGRCIASKLECNGENDCG-DNSDERNCGRTKAVCSRKYNPIPSVQLMGAGF 883
             C ++FRC SG+CI+  L CNG+ DC  D +DE  C            P P+++L G G+
Sbjct: 84   GCGDRFRCFSGQCISKSLVCNGDPDCEEDGADEDKCENVANPSCNIDKPPPNIELTGYGY 143

Query: 884  HILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKXXXXXXXXXXX 1063
            +++ G+ +  V+     GG C+ V S    + +R+  N+ +  F+V+             
Sbjct: 144  NVVTGQGKKRVINTKSFGGQCRKVFSGDGKDFYRLSGNILSYTFQVKVDNDFNYEFYNSS 203

Query: 1064 LIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFKQAIQASHKKDSSFIRIH 1243
               ++++  +Q T +  +    H    Y            + K+ I    K     + + 
Sbjct: 204  WSYIKHTSTEQNTFYSWKGLFSHSRNTYGHG---------SAKEEIDTKMKSYKLLV-VQ 253

Query: 1244 KVIKVLNFTMKTKD-LQLSDVFLKALNHLPLEYNAALYSRIFDDFGTHYFTSGSLGGVYD 1420
              ++V  FT    + LQ+++ F K L+HLP  Y+ + Y R+ D +GTHY  SGSLGG Y 
Sbjct: 254  NTVEVAQFTNNNPEFLQVAEPFWKELSHLPTLYDYSAYRRLIDQYGTHYLQSGSLGGEYR 313

Query: 1421 LLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRCTTNRMSEKY----EGS 1588
            +L+   +   K +G   ++   C   + +   F+ T +  + RC     +EK     +G 
Sbjct: 314  VLFYVDSGSAKETGFQSDQDNACSSADFQ---FLFTSS-ADQRCMKQLETEKSTSGNKGR 369

Query: 1589 FLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKT-YSEWLESVKENPAVIDFELAPIT 1765
             L+G      LV+GG S + A L++    +  G K  YS W  SV   P VI  +LAP+ 
Sbjct: 370  LLRGKP----LVRGGDSGFVADLSFLDLDNPAGNKQRYSSWAGSVTRLPQVIKEKLAPLY 425

Query: 1766 DLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECLCVCQSGTYGDN 1945
            +LV+ +PCA  +R  L+RA  EY  +FDPC C PC N G  ++  T+C C+C+  T+G  
Sbjct: 426  ELVKEVPCASVKRLYLKRAIEEYFDEFDPCHCRPCQNGGLAIVVETQCQCLCKPYTFGSA 485

Query: 1946 CERRA-PDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEH 2122
            CE+      ++  VDG W CWSSWS C    KR+R+RECNNP PR  GK C GE  + + 
Sbjct: 486  CEQGVLVGDQAGGVDGGWNCWSSWSPC-VQGKRTRSRECNNPPPRDDGKSCLGETTESKQ 544

Query: 2123 CTFSIMQNTGQPCIGDDEDMKEIDLPE-------IESDSGCPQPVPPENGFIRNEKTLYS 2281
            C              +D+D++++ L E       +     C  P   ++GF++ E T+  
Sbjct: 545  C--------------EDQDLEKLRLLEPHCFHSSLAPKEFCLSPPALKDGFVQGEGTMVP 590

Query: 2282 VGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQRLYK 2461
            VG+ V   C  G+  +G    RC  D  W  G++ CQ+  C+LP     ++  P +  Y 
Sbjct: 591  VGQSVVYACDEGYSLIGDPVARCGEDLQWLVGEMHCQKLACVLPGEMNGMQSHPQKPFYM 650

Query: 2462 IGDSIELSCPKGFVIAGPSRYTC-SGDSWTPPISSSLTCEQDFLT--RLKGHCQPGQKQL 2632
            +G+ + LSC  G  + GPS   C S   W+P +  +   ++   T       CQP +K  
Sbjct: 651  VGEKVTLSCVGGMSLEGPSTLLCGSSLKWSPELKDAKCVQKATSTPPPAAPACQPWEKLQ 710

Query: 2633 GSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDG 2812
             S+C+C  P E  S  S D+C  D   N   + + CK              +H+  C   
Sbjct: 711  NSKCICKMPYECGS--SLDVCARDESRNKILSLTICK--------------MHVVHCHKR 754

Query: 2813 PQLEWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQCLKGGYQHYCVKM 2992
                 G E   L S + K   CG   C  W +C A   KCIC    +C   GY+  CV++
Sbjct: 755  NYTLVGKESCTLPSPAEK--VCG--ACPIWSKCDAQNGKCICREASECQTAGYR-ICVEV 809

Query: 2993 GSSTTTRTMNICEVGAIRCALRKMEI 3070
                   TM+ CE G +RC  + + I
Sbjct: 810  NGK--EETMSECEAGILRCRGQSISI 833


>ref|NP_666260.1| complement component C8 alpha chain precursor [Mus musculus].
          Length = 587

 Score =  295 bits (754), Expect = 2e-79
 Identities = 179/565 (31%), Positives = 266/565 (47%), Gaps = 33/565 (5%)
 Frame = +2

Query: 530  INCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEVD 709
            ++C L D+  W+DC PC +K+++ RS+L P++FGG  C+  +     C     C + +  
Sbjct: 37   VSCQLSDWYKWTDCFPCQDKKYRYRSLLQPSKFGGTICSGDIWDEASCDSPTPC-LRQAQ 95

Query: 710  CKNKFRC-DSGRCIASKLECNGENDCGDNSDERNCGRTKAVCS--RKYNPIPSVQLMGAG 880
            C   F+C ++GRC+   L CNG+NDC D SDE +C   +       +Y PIP  +    G
Sbjct: 96   CGQDFQCRETGRCLKRHLVCNGDNDCLDGSDESDCEDVRVTEDDCHQYEPIPGSERAALG 155

Query: 881  FHILAGEPRGEVLGNSFTGGICKTVKSS-----------------KASNPFRVPANLENV 1009
            ++IL  E    V    + GG C+TV +                  +    FR P N    
Sbjct: 156  YNILTQEEAQSVYDAKYYGGQCETVYNGDWRKLRYDPTCERLYYGEDEKYFRKPYNFLKY 215

Query: 1010 DFEV--QTKXXXXXXXXXXXLI-PLENSKDQQA---TGFGQEKSSFHVPIFYXXXXXXXX 1171
             FE    T            L   ++N K   A    G    KS   + +          
Sbjct: 216  HFEALADTSISSEFYDDANDLFFHIKNGKSHSAGVTVGVAPVKSPVSIEV------TGSG 269

Query: 1172 XXXXAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAAL 1351
                +F   +   ++K   F+R+   I+   F M+  ++ L +  L++L  LP ++N  +
Sbjct: 270  SKASSFLNKLNKYNEKRYGFMRVSTKIQTAQFKMRRNNIVLDEGMLQSLMELPEQFNYGM 329

Query: 1352 YSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNC----IRIETKKRYF 1519
            Y++  +D+GTHY TSG++GG+Y+ +     E++K  G T +E + C    I I  K    
Sbjct: 330  YAKFINDYGTHYITSGTMGGIYEYVMVLDKEKMKTEGTTVDEVQKCIGGGIGIGIKDSTI 389

Query: 1520 IVTKTKVEHRCTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTY 1699
                   E  C  +   ++     + G E  IS V+GG S + + L     +      TY
Sbjct: 390  EGVGISGEF-CENSGDGDRDIRKKITGVEDIISRVQGGSSVWGSVLTHNSSAI-----TY 443

Query: 1700 SEWLESVKENPAVIDFELAPITDLVR--NIPCAVTRRNNLRRAFREYAAKFDPCQCAPCP 1873
              W  S+K NP VIDFE+ PI  L+R  N+    T+R NLRRA  +Y  +F+ C+C PC 
Sbjct: 444  QSWGRSLKYNPVVIDFEMQPIYQLLRHTNLGPLETKRQNLRRALDQYLMEFNACRCGPCF 503

Query: 1874 NNGRPVLSGTECLCVCQSGTYGDNCERRAPD-YKSNAVDGNWGCWSSWSTCDATYKRSRT 2050
            NNG P+L GT C C C  G  G  CER   +  K     G+W CWSSWS C     + R 
Sbjct: 504  NNGEPILDGTNCRCQCSMGRQGLACERTVIEGLKDFKAAGHWSCWSSWSECRGG-SQERR 562

Query: 2051 RECNNPAPRQGGKPCDGERRQEEHC 2125
            R+CNNP P+ GG PC G   Q + C
Sbjct: 563  RQCNNPPPKNGGTPCLGRNLQTQAC 587


>ref|NP_598643.1| complement component C8 beta chain precursor [Mus musculus].
          Length = 589

 Score =  264 bits (674), Expect = 4e-70
 Identities = 163/545 (29%), Positives = 255/545 (46%), Gaps = 12/545 (2%)
 Frame = +2

Query: 527  PINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEV 706
            PI+C L  +  W+ CDPC +K+++   +L P+QF G+ C         C+ ++ C+  +V
Sbjct: 61   PIDCELSTWSSWTACDPCQKKRYRHTYLLRPSQFYGELCDLSDKEVEDCVTNQPCR-SQV 119

Query: 707  DCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVCSRKYNPIPSVQLMGAGFH 886
             C+      +GRC+  +L CNG+NDCGD SDE NC R    C R+     ++  + +G +
Sbjct: 120  RCEGFVCAQTGRCVNRRLLCNGDNDCGDQSDEANCRRIYKNCQREMEQYWAIDRLASGIN 179

Query: 887  ILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKXXXXXXXXXXXL 1066
            +      G VL + +  G C        +  FR P N+E+  +  QTK           L
Sbjct: 180  LFTNTFEGPVLDHRYYAGGCSPHYILDTN--FRKPYNVES--YTPQTKCEYEFT-----L 230

Query: 1067 IPLENSKD------QQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFKQAIQASHKKDSS 1228
               E+  D      ++ T      S F V                 +    +      S 
Sbjct: 231  TEYESYSDFERLVIEKKTHMFNFTSGFKVDGVMDLGIKVESNEGKNYVTRTKRFAHTQSK 290

Query: 1229 FIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDDFGTHYFTSGSLG 1408
            F+    V++V ++ +K++ L L   FL+ +  LPLEY+   Y  +  DFGTH+ T   LG
Sbjct: 291  FLHARSVLEVAHYKLKSRSLMLHYEFLQRVKSLPLEYSYGEYRDLLRDFGTHFITEAVLG 350

Query: 1409 GVYDLLYQFSNEELKNSGLTQEEAKNCIRIE---TKKRYFIVTKTKVEHRCTTNRMSEKY 1579
            G+Y+     + + ++    T      C           Y +  K  V  +  ++ M E  
Sbjct: 351  GIYEYTLIMNKDAMEQGDYTLSHVTACAGGSFGIGGMVYKVYVKVGVSAKKCSDIMKEIN 410

Query: 1580 EGSFLQGS-EKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKENPAVIDFELA 1756
            E +      E  + LV+GG SE   ALA+++    P  +    W ++VK NPA+I  +  
Sbjct: 411  ERNKRSTMVEDLVVLVRGGTSEDITALAYKE---LPTPELMEAWGDAVKYNPAIIKIKAE 467

Query: 1757 PITDLV--RNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECLCVCQSG 1930
            P+ +LV   +   + T + NL++A  E+ ++   C+CAPC  NG PVL G+ C C+C  G
Sbjct: 468  PLYELVTATDFAYSSTVKQNLKKALEEFQSEVSSCRCAPCRGNGVPVLKGSRCECICPGG 527

Query: 1931 TYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERR 2110
              G  CE      K   +DG W CWS WS C   +K +R R+CNNPAP +GG PC G   
Sbjct: 528  FQGTACE--VTYRKDIPIDGKWSCWSDWSACSGGHK-TRHRQCNNPAPHKGGSPCSGPAS 584

Query: 2111 QEEHC 2125
            +  +C
Sbjct: 585  ETLNC 589


>ref|NP_038513.1| complement component C9 [Mus musculus].
          Length = 561

 Score =  207 bits (528), Expect = 3e-53
 Identities = 137/508 (26%), Positives = 225/508 (44%), Gaps = 33/508 (6%)
 Frame = +2

Query: 527  PINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEV 706
            PI+C +  +  WS+CDPC++++F+ RSIL   QF G+ C + L   + C P++ C+  + 
Sbjct: 51   PIDCRMSPWSNWSECDPCLKQRFRSRSILAFGQFNGKSCVDVLGDRQGCEPTQECEEIQE 110

Query: 707  DCKNKFRCDSGRCIASKLECNGENDCGDNSDERNC-GRTKAVCSRKYNPIPSVQL-MGAG 880
            +C N F+C++GRCI  +L CNG+NDCGD SDE +C    +  C  +      + L  G G
Sbjct: 111  NCGNDFQCETGRCIKRRLLCNGDNDCGDYSDENDCDDDPRTPCRDRVAEESELGLTAGYG 170

Query: 881  FHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKXXXXXXXXXX 1060
             +IL  EP      N F  G+C  V+  K    +R P N+ ++ +E +            
Sbjct: 171  INILGMEPLRTPFDNEFYNGLCDRVRDEKTY--YRKPWNVVSLIYETKADKSFRTENYDE 228

Query: 1061 XLIPLENSKDQQATGFG------------QEKSSFHV--------PIFYXXXXXXXXXXX 1180
             L   +    ++ + F              EK +  V        P              
Sbjct: 229  HLEVFKAINREKTSNFNADFALKFSATEVPEKGAGEVSPAEHSSKPTNISAKFKFSYFMG 288

Query: 1181 XAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSR 1360
              F++      +    F+ +  V+++  F M+ +D+ L   FL  +  LP  Y    Y  
Sbjct: 289  KNFRRLSSYFSQSKKMFVHLRGVVQLGRFVMRNRDVVLRSTFLDDVKALPTSYEKGEYFG 348

Query: 1361 IFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFI------ 1522
              + +GTHY TSGSLGG Y+++Y      +K  G+   + K+C+      R  +      
Sbjct: 349  FLETYGTHYSTSGSLGGQYEIVYVLDKASMKEKGVDLNDVKHCLGFNMDLRIPLQDDLKD 408

Query: 1523 --VTKTKVEHRCTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWE--KGSSGPGE 1690
              VT +     C      +    +     +  IS ++GG  E A  L  +  +G     +
Sbjct: 409  ASVTASVNADGCIKTDNGKTVNITRDNIIDDVISFIRGGTREQAILLKEKILRGDKTFDK 468

Query: 1691 KTYSEWLESVKENPAVIDFELAPITDLV-RNIPCAVTRRNNLRRAFREYAAKFDPCQCAP 1867
              ++ W  S+   PA+I   ++PI +L+   I  A  ++ NL +A  +Y  +F   +C P
Sbjct: 469  TDFANWASSLANAPALISQRMSPIYNLIPLKIKDAYIKKQNLEKAVEDYIDEFSTKRCYP 528

Query: 1868 CPNNGRPVLSGTECLCVCQSGTYGDNCE 1951
            C N G  +L   +CLC C     G  CE
Sbjct: 529  CLNGGTIILLDGQCLCSCPMMFRGMACE 556


>ref|NP_035203.3| perforin-1 precursor [Mus musculus].
          Length = 554

 Score = 80.1 bits (196), Expect = 1e-14
 Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 20/276 (7%)
 Frame = +2

Query: 1190 KQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDV-----------FLKALNHLPLE 1336
            + ++  SH K ++F          NF   T + ++              F KAL  LP  
Sbjct: 143  RASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLDFKKALRALPRN 202

Query: 1337 YNAAL---YSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETK 1507
            +N++    Y R+   +GTH+ T+  LGG   +L      +L  +GLT +E  +C+ +E +
Sbjct: 203  FNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVEAQ 262

Query: 1508 KRYFIVTKTKVEHR-CTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGP 1684
                       E++ C   +   K   SF Q   +    V GG  +    L +  G+   
Sbjct: 263  VSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLF--GNQAT 320

Query: 1685 GEKTYSEWLESVKENPAVIDFELAPITDLVRNIPCAVTRRNNLRRAFREY---AAKFDPC 1855
             E+ +S W  S+  NP ++D+ L P+  L+        +R  LR+A   Y    A++  C
Sbjct: 321  PEQ-FSTWTASLPSNPGLVDYSLEPLHTLLEE---QNPKREALRQAISHYIMSRARWQNC 376

Query: 1856 QCAPCPNNGRPVLSGTECLCVCQSG--TYGDNCERR 1957
               PC  +G+   S   C C CQ    T  D C R+
Sbjct: 377  S-RPC-RSGQHKSSHDSCQCECQDSKVTNQDCCPRQ 410


>ref|NP_694775.1| netrin receptor UNC5D precursor [Mus musculus].
          Length = 956

 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 29/70 (41%), Positives = 38/70 (54%)
 Frame = +2

Query: 1982 VDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEHCTFSIMQNTGQPC 2161
            VDG+W  WS WS C    +  R REC  P PR GGK C+G  ++ E+CT  +       C
Sbjct: 305  VDGSWEVWSEWSVCSPECEHLRIRECTAPPPRNGGKFCEGLSQESENCTDGL-------C 357

Query: 2162 IGDDEDMKEI 2191
            I D + + EI
Sbjct: 358  ILDKKPLHEI 367


>ref|NP_033498.1| netrin receptor UNC5C precursor [Mus musculus].
          Length = 931

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 26/49 (53%), Positives = 29/49 (59%)
 Frame = +2

Query: 1982 VDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEHCT 2128
            VDG W  WS WSTC       R REC  PAP+ GGK CDG   Q ++CT
Sbjct: 315  VDGRWTSWSKWSTCGTECTHWRRRECTAPAPKNGGKDCDGLVLQSKNCT 363



 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = +2

Query: 1982 VDGNWGCWSSWSTCDATYKRS---RTRECNNPAPRQGGKPCDGERRQEEHCT 2128
            V+G W  W+ WS C++   R    RTR C NPAP  GG  C+G+  Q+  CT
Sbjct: 259  VNGGWSTWTEWSVCNSRCGRGYQKRTRTCTNPAPLNGGAFCEGQSVQKIACT 310


>ref|NP_073725.2| sushi, von Willebrand factor type A, EGF and pentraxin
            domain-containing protein 1 precursor [Mus musculus].
          Length = 3567

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 54/194 (27%), Positives = 80/194 (41%), Gaps = 12/194 (6%)
 Frame = +2

Query: 2222 CPQP-VPPENGFIRNEKTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRT 2398
            CP P V PEN  + +EK  Y V ++V I C  GF   G     C PD TW   +  C++ 
Sbjct: 3353 CPVPFVIPENAVL-SEKEFY-VDQNVSIKCREGFLLKGNGVITCSPDETWTHTNARCEKI 3410

Query: 2399 DCLLPV-VPEVLKLSPFQRLYKIGDSIELSCPKGFVIAGPSRYTC-SGDSWTP-PISSSL 2569
             C  P  V   +    +   Y+ GD I  SC  G+++ G  R  C    +WTP P+  ++
Sbjct: 3411 SCGPPSHVENAIARGVY---YQYGDMITYSCYSGYMLEGSLRSVCLENGTWTPSPVCRAV 3467

Query: 2570 ---TCEQDFLTRLKGHCQPGQKQLGSEC---VCLSPEEDCSHHSEDLCVLDTDSNHYFTS 2731
                C+   + +    C      +G  C   +C+ P   C +    +     D    +T 
Sbjct: 3468 CRFPCQNGGVCQRPNACSCPDGWMGRLCEEPICILP---CLNGGRCVAPYQCDCPTGWTG 3524

Query: 2732 SACKFLA--EKCLN 2767
            S C        CLN
Sbjct: 3525 SRCHTATCQSPCLN 3538



 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
 Frame = +2

Query: 2222 CPQPVPPENGFIRNEKTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTD 2401
            C  P  PENG    E  +Y+VG  V   C  G + VG     CL    W R    C+   
Sbjct: 1788 CKAPENPENGHSSGE--IYTVGTAVTFSCDEGHELVGVSTITCLETGEWDRLRPSCEAIS 1845

Query: 2402 CLLPVVPEVLKLSPFQRLYKIGDSIELSCPKGFVIAGPSRYTC-SGDSW--TPPISSSLT 2572
            C +P VPE   +      Y  G  +   C KG+ ++G     C +  SW  + P+   + 
Sbjct: 1846 CGVPPVPENGGVDGSAFTY--GSKVVYRCDKGYTLSGDEESACLASGSWSHSSPVCELVK 1903

Query: 2573 CEQ 2581
            C Q
Sbjct: 1904 CSQ 1906



 Score = 50.8 bits (120), Expect = 7e-06
 Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
 Frame = +2

Query: 2015 STCDATYKRSRTR------ECNNPAPRQGG--KPCDGERRQEEHCTFSIMQNTGQPCIGD 2170
            STC+AT + S+         CN P   + G  +   G R  E    F    N G    G 
Sbjct: 2183 STCEATGQWSKPTPTCHPVSCNEPPKVENGFLEHTTG-RTFESEARFQC--NPGYKAAGS 2239

Query: 2171 DEDMKEI------DLPEIESDSGCPQPVPPENGFIRNEKTLYSVGEDVEIVCLTGFKTVG 2332
               + +       D P   +   C +P P +NGF++ E   + VG  V+ VC  G++ VG
Sbjct: 2240 PVFVCQANRHWHSDAPLSCTPLNCGKPPPIQNGFLKGES--FEVGSKVQFVCNEGYELVG 2297

Query: 2333 YQYFRCLPDRTW-RRGDVECQRTDCLLPVVPE---VLKLSPFQRLYKIGDSIELSCPKGF 2500
               + C     W ++   +C  T C  P + E   VLK    +   ++G  + +SC +G 
Sbjct: 2298 DNSWTCQKSGKWSKKPSPKCVPTKCAEPPLLENQLVLK----ELASEVG-VMTISCKEGH 2352

Query: 2501 VIAGPSRYTC 2530
             + GPS   C
Sbjct: 2353 ALQGPSVLKC 2362


>ref|NP_033180.2| semaphorin-5A [Mus musculus].
          Length = 1074

 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
 Frame = +2

Query: 1874 NNGRPVLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRS--- 2044
            NN  P   G  CL        G + E +  +     VDG W CWSSWS C AT       
Sbjct: 812  NNPEPKFGGMPCL--------GPSLEFQECNILPCPVDGVWSCWSSWSKCSATCGGGHYM 863

Query: 2045 RTRECNNPAPRQGGKPCDGERRQEEHC 2125
            RTR C+NPAP  GG  C G   +E  C
Sbjct: 864  RTRSCSNPAPAYGGDICLGLHTEEALC 890



 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
 Frame = +2

Query: 1748 ELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECLCVCQS 1927
            E   +T   ++IP   TR   +  +F  ++         PC +     +      C+C+S
Sbjct: 518  ESLSMTQWDQSIPTCPTRNLTVDGSFGPWSP------WTPCTHTDGTAVGS----CLCRS 567

Query: 1928 GTY--------GDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYK---RSRTRECNNPAP 2074
             +         G  CE    +  + + +G W  W+SWS C  T     + R R C+NP P
Sbjct: 568  RSCDSPAPQCGGWQCEGPRMEITNCSRNGGWTPWTSWSPCSTTCGIGFQVRQRSCSNPTP 627

Query: 2075 RQGGKPCDGERRQEEHC 2125
            R GG+ C G+ R+E +C
Sbjct: 628  RHGGRVCVGQNREERYC 644



 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 1955 RAPDYKSNAVDGNWGCWSSWSTCDATYKR---SRTRECNNPAPRQGGKPCDGERRQEEHC 2125
            RA  Y ++ V+G W  W+SWS C     R   +R R CNNP P+ GG PC G   + + C
Sbjct: 774  RAGRYSAHTVNGAWSAWTSWSQCSRDCSRGIRNRKRVCNNPEPKFGGMPCLGPSLEFQEC 833


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 114,667,024
Number of extensions: 3095121
Number of successful extensions: 11280
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 10786
Number of HSP's successfully gapped: 89
Length of query: 1141
Length of database: 15,617,559
Length adjustment: 112
Effective length of query: 1029
Effective length of database: 12,253,527
Effective search space: 12608879283
Effective search space used: 12608879283
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVRM1_0081_E01
         (3424 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001039444.1| complement component C6 precursor [Bos tauru...  1656   0.0  
Alignment   gi|NP_001039431.1| complement component C7 precursor [Bos tauru...   435   e-121
Alignment   gi|NP_001039750.1| complement component C8 alpha chain [Bos tau...   308   2e-83
Alignment   gi|NP_001039606.2| complement component 8, beta polypeptide [Bo...   291   3e-78
Alignment   gi|NP_001030441.1| complement component C9 precursor [Bos tauru...   211   3e-54
Alignment   gi|NP_001137207.1| perforin-1 [Bos taurus].                           83   2e-15
Alignment   gi|NP_001179447.1| netrin receptor UNC5D [Bos taurus].                68   6e-11
Alignment   gi|XP_002698776.1| PREDICTED: unc-5 homolog D (C. elegans) [Bos...    68   6e-11
Alignment   gi|XP_002696487.1| PREDICTED: sema domain, seven thrombospondin...    65   3e-10
Alignment   gi|XP_583112.4| PREDICTED: sema domain, seven thrombospondin re...    65   3e-10

>ref|NP_001039444.1| complement component C6 precursor [Bos taurus].
          Length = 932

 Score = 1656 bits (4288), Expect = 0.0
 Identities = 764/932 (81%), Positives = 836/932 (89%)
 Frame = +2

Query: 293  MDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGXXXXXXXXXXNQYYLDNF 472
            M +HSV+YFILLS LIDKSQACFCDHYPW+QWSSCSKTCNSG          ++YY +NF
Sbjct: 1    MARHSVMYFILLSALIDKSQACFCDHYPWSQWSSCSKTCNSGTQTRQRRIVTDKYYFENF 60

Query: 473  CDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEP 652
            C +LCTKQE+RECNWQTCPINC LGDYGPWSDCDPCV+K+FKVRSIL P+QFGGQPCTEP
Sbjct: 61   CGQLCTKQESRECNWQTCPINCRLGDYGPWSDCDPCVQKRFKVRSILRPSQFGGQPCTEP 120

Query: 653  LMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVC 832
            LMTF+PCIPSKLCKIEE+DCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGR K VC
Sbjct: 121  LMTFQPCIPSKLCKIEEIDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRKKTVC 180

Query: 833  SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVD 1012
            SR +NPIP VQLMG GFH LAGEPRGEVL NSFTGG+C+TVKSS+ASNP+RVPANLENV+
Sbjct: 181  SRSHNPIPGVQLMGMGFHFLAGEPRGEVLDNSFTGGVCRTVKSSRASNPYRVPANLENVN 240

Query: 1013 FEVQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFK 1192
            FEVQTK           LIPLE++KDQ+A G G   SSF VPIFY            AFK
Sbjct: 241  FEVQTKEDDLEADFYDDLIPLEDNKDQEALGSGLATSSFRVPIFYSSKRSQSSSHSSAFK 300

Query: 1193 QAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDD 1372
            QAIQAS KK SSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYN+ALYSRIFDD
Sbjct: 301  QAIQASQKKASSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNSALYSRIFDD 360

Query: 1373 FGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRC 1552
            FGTHYFTSGSLGGVYDLLYQFS EELKNSGLTQEEAKNCIRIETKKR+  V KTKVEHRC
Sbjct: 361  FGTHYFTSGSLGGVYDLLYQFSKEELKNSGLTQEEAKNCIRIETKKRFLFVKKTKVEHRC 420

Query: 1553 TTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKENP 1732
            TTN++SEKYEGSF+QGSEKSISLV+GGRS YAAALAWEKGS  P E+ +S+WLESVKENP
Sbjct: 421  TTNKLSEKYEGSFMQGSEKSISLVQGGRSAYAAALAWEKGSPVPEERVFSDWLESVKENP 480

Query: 1733 AVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECL 1912
            +VIDF LAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCA CPN+GRPVLSGTECL
Sbjct: 481  SVIDFALAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCARCPNSGRPVLSGTECL 540

Query: 1913 CVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKP 2092
            CVCQSGTYG+NCERR+PDYKSNAVDGNWGCWSSWS+CDATY+RSRTRECNNPAP+QGGK 
Sbjct: 541  CVCQSGTYGENCERRSPDYKSNAVDGNWGCWSSWSSCDATYRRSRTRECNNPAPQQGGKR 600

Query: 2093 CDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNEKT 2272
            C+GERRQEEHCTFSIMQN GQPCI DDEDMKE DLPE+ESDSGCPQPVPPENGFIRNEK 
Sbjct: 601  CEGERRQEEHCTFSIMQNDGQPCISDDEDMKETDLPELESDSGCPQPVPPENGFIRNEKK 660

Query: 2273 LYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQR 2452
             YSVGE+VEI+C TGFK VGYQYFRCLPDR+WR+GDVECQRT+CL P+VPE L LSPFQ 
Sbjct: 661  QYSVGEEVEILCFTGFKAVGYQYFRCLPDRSWRQGDVECQRTECLKPIVPEGLTLSPFQT 720

Query: 2453 LYKIGDSIELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQDFLTRLKGHCQPGQKQL 2632
            LYKIGDSIEL+CP+G V+ GPSRYTCSGDSWTPPIS SL+CE+D LT L+GHCQPGQKQL
Sbjct: 721  LYKIGDSIELTCPRGLVVNGPSRYTCSGDSWTPPISDSLSCEKDVLTGLRGHCQPGQKQL 780

Query: 2633 GSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDG 2812
            GSECVC+SPEEDC H+SE++CVLDT S+ YFTSSACK LAEKCLNNQQL F+HIGSC++G
Sbjct: 781  GSECVCMSPEEDCGHYSEEICVLDTTSSDYFTSSACKLLAEKCLNNQQLHFVHIGSCEEG 840

Query: 2813 PQLEWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQCLKGGYQHYCVKM 2992
            PQL+WGLERIKLSSSSTKNESCGYDTCY+WE+CSATTSKC+CLLP QC KGG Q +CV++
Sbjct: 841  PQLKWGLERIKLSSSSTKNESCGYDTCYNWEKCSATTSKCVCLLPSQCTKGGDQLFCVQI 900

Query: 2993 GSSTTTRTMNICEVGAIRCALRKMEILYPGRC 3088
            GSS   +TMNICEVGA++CA R+MEIL+ GRC
Sbjct: 901  GSSANGKTMNICEVGAVKCAKREMEILHSGRC 932


>ref|NP_001039431.1| complement component C7 precursor [Bos taurus].
          Length = 843

 Score =  435 bits (1119), Expect = e-121
 Identities = 268/871 (30%), Positives = 418/871 (47%), Gaps = 30/871 (3%)
 Frame = +2

Query: 527  PINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEV 706
            PINC  G Y PWS+C+ C + Q + RSI    Q+GG  C       +PC P++ C  E+ 
Sbjct: 25   PINCQWGSYAPWSECNGCTKTQTRRRSIAVYGQYGGHSCVGSAFETQPCQPTRGCPTED- 83

Query: 707  DCKNKFRCDSGRCIASKLECNGENDCG-DNSDERNC--GRTKAVCSRKYNPIPSVQLMGA 877
             C  +FRC SG+CI+  L CNG++DC  D +DE  C    ++  C  K  P P+++L G 
Sbjct: 84   GCGERFRCFSGQCISKSLVCNGDSDCEEDGADEDRCEDAESRPACD-KDKPPPNIELTGR 142

Query: 878  GFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKXXXXXXXXX 1057
            G++ L G+ R +VL     GG C+ V S    + +R+  N+ +  F+V+           
Sbjct: 143  GYNALTGQFRNQVLNTKSFGGQCRKVYSGDGRDFYRLSGNILSYTFQVKINND------- 195

Query: 1058 XXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFKQAIQASH-------- 1213
                   N        + +E S+ H                  F  +  +SH        
Sbjct: 196  -----FNNEFYNSTWAYVKETSTEH---------SSSSKGRFLFFSSSSSSHGYSSNTNI 241

Query: 1214 ---KKDSSFIRIHKVIKVLNFTMKTKD-LQLSDVFLKALNHLPLEYNAALYSRIFDDFGT 1381
               KK    + +   ++V  F     + LQL++ F K L++LP  Y+ + Y R+ D +GT
Sbjct: 242  LTKKKSYQLLVLQNTVEVAQFINNNPEFLQLAESFWKELSYLPSLYDYSAYRRLIDQYGT 301

Query: 1382 HYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRCTTN 1561
            HY  SGSLGG Y +++   +E++K      E+ + C     +   F+ T +K   +CTT 
Sbjct: 302  HYLQSGSLGGEYKVIFHMDSEKVKKFDFHSEDKRKCASSHFQ---FLFTSSK--QKCTTM 356

Query: 1562 ----RMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKT-YSEWLESVKE 1726
                +   + EG+ L+G    +  V+GG S + A L++   ++  G K  YS+W  SV +
Sbjct: 357  EEVLKSVSENEGNLLRG----VPFVRGGHSGFLAGLSYLDLNNPAGNKRRYSQWAGSVPD 412

Query: 1727 NPAVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTE 1906
             P VI  +L P+ +LV+ +PCA  ++  L+RA  EY  +FDPC C PC N G   + G++
Sbjct: 413  LPEVIKQKLTPLYELVKEVPCASVKKLYLKRAIEEYLDEFDPCHCRPCHNGGMATVQGSQ 472

Query: 1907 CLCVCQSGTYGDNCERRA-PDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQG 2083
            C C C+  T G  CE+      ++  VDG W CWSSW  C    K++R+R+CNNP+P  G
Sbjct: 473  CQCYCKPKTSGVACEQGVLLGDQAGGVDGGWNCWSSWGPC-VQGKKTRSRQCNNPSPSAG 531

Query: 2084 GKPCDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPE-------IESDSGCPQPVPP 2242
            GK C GE  +   C              +DE+++ + L E       +     C  P   
Sbjct: 532  GKSCIGETSETRQC--------------EDEELEHLRLLEPHCFPLSLVPTKFCSSPPAL 577

Query: 2243 ENGFIRNEKTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVP 2422
            ++GF+++E   + VG+++   C  G+  VG    RC  D  W  G++ CQ+  C+LP + 
Sbjct: 578  KDGFVQDEGATFPVGKNIMYTCKEGYSLVGDPVARCGEDLQWLVGNMHCQKIACVLPALM 637

Query: 2423 EVLKLSPFQRLYKIGDSIELSCPKGFVIAGPSRYTCSGD-SWTPPISSSLTCEQDF-LTR 2596
            + ++  P +  Y IG+ + +SC  G  + GPS + CS    W+P +      +++  LT 
Sbjct: 638  DGIQSHPHKPFYTIGEKVTISCSGGRSLEGPSTFLCSSSLKWSPEVKDVQCVQREAPLTP 697

Query: 2597 LKGHCQPGQKQLGSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQ 2776
                CQP +K   S CVC  P E  S  S  +C  D  S      + CK           
Sbjct: 698  KVPKCQPWEKLQNSRCVCKMPYECGS--SLGVCARDERSKRILPLTVCK----------- 744

Query: 2777 LQFLHIGSCQDGPQLEWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQC 2956
               +H+  CQ       G E   L +S+ K  +CG   C  WE+C A  S+C+C    +C
Sbjct: 745  ---MHVLQCQGRNYTVAGRESCTLPASAEK--ACG--VCPLWEKCDAEGSECVCRAASEC 797

Query: 2957 LKGGYQHYCVKMGSSTTTRTMNICEVGAIRC 3049
             + G+   CV++      +TM  CE G +RC
Sbjct: 798  EEAGFS-VCVEVNG--REQTMTECEAGVLRC 825


>ref|NP_001039750.1| complement component C8 alpha chain [Bos taurus].
          Length = 589

 Score =  308 bits (790), Expect = 2e-83
 Identities = 179/562 (31%), Positives = 277/562 (49%), Gaps = 30/562 (5%)
 Frame = +2

Query: 530  INCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEVD 709
            ++C L ++  W+DC PC +K+++ RS+L PN+FGG  C+  +     C     C + +  
Sbjct: 40   VSCQLDNWAEWTDCFPCQDKKYRYRSLLQPNKFGGTICSGNVWDQASCHSPTAC-LSQAQ 98

Query: 710  CKNKFRC-DSGRCIASKLECNGENDCGDNSDERNCGRTKAV---CSRKYNPIPSVQLMGA 877
            C   F+C ++GRC+   L CNG+ DC D SDE +C   + +   CS+ Y+PIP  +    
Sbjct: 99   CGQDFQCKETGRCLKRHLVCNGDKDCLDGSDEDDCEDVRILENDCSQ-YDPIPGSEKAAL 157

Query: 878  GFHILAGEPRGEVLGNSFTGGICKTVKSSK-----------------ASNPFRVPANLEN 1006
            G++IL  E    V    + GG C+TV + +                     FR P N   
Sbjct: 158  GYNILTQEEAQHVYDARYYGGQCETVYNGEWRELQYDPACERLYYGDDDKYFRKPYNFLK 217

Query: 1007 VDFEVQ--TKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXX 1180
              FE Q  TK           L+    +    ++G         VP+             
Sbjct: 218  YHFEAQADTKISSEIYNDANDLLTKVKNDKSVSSGLTIGVGIRGVPV--TVTAGVSMSQD 275

Query: 1181 XAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSR 1360
             AF + +   H+K  SF+RI   ++  +F M+ +++ L +  L++L  LP  Y+  +Y++
Sbjct: 276  AAFLKKLSKYHEKKYSFMRIFTKVQTAHFKMRRENIVLDEGMLQSLMELPERYHYGMYAK 335

Query: 1361 IFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKV 1540
              +D+GTHY TSGS+GGVY+ +   + E+++ +G+T  E + C  +     Y      ++
Sbjct: 336  FINDYGTHYITSGSMGGVYEYILVLNREKMETAGVTSAEIQKCFGVSLGIEYEYSEAIQI 395

Query: 1541 EHRCTTNRMSEKYEGSFLQ-----GSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSE 1705
            +   +     +  +G   +     G E  IS V+G  S +  +L  +         TY  
Sbjct: 396  KGSSSLGPCKKSGDGKLTENEKAMGVEDFISRVRGDSSGWGGSLTQDSSL-----VTYRS 450

Query: 1706 WLESVKENPAVIDFELAPITDLVR--NIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNN 1879
            W  S+K NPAVIDFE+ PI ++++  N+    T+R NLRRA  +Y  +F+ C+C PC NN
Sbjct: 451  WGRSLKYNPAVIDFEMKPIHEILQHTNLGSLETKRQNLRRALDKYLMEFNACRCGPCFNN 510

Query: 1880 GRPVLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTREC 2059
            G P+L GT C C C  G  G  CE+   +      DG W CWSSWS C  +  + R REC
Sbjct: 511  GEPILEGTSCKCQCPVGHQGLACEQMQSE--GAQADGRWSCWSSWSAC-RSGTQERRREC 567

Query: 2060 NNPAPRQGGKPCDGERRQEEHC 2125
            NNPAP+ GG  C G R Q + C
Sbjct: 568  NNPAPQNGGASCPGHRVQTQAC 589


>ref|NP_001039606.2| complement component 8, beta polypeptide [Bos taurus].
          Length = 590

 Score =  291 bits (744), Expect = 3e-78
 Identities = 173/563 (30%), Positives = 276/563 (49%), Gaps = 13/563 (2%)
 Frame = +2

Query: 476  DRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPL 655
            + L   ++TR  +    PI+C L  +  W+ CDPC +K+++   ++ P+QF G+ C    
Sbjct: 45   ESLAKTRQTRSVDVTPLPIDCELSSWSSWTTCDPCQKKRYRHAYLIRPSQFHGEQCNFSD 104

Query: 656  MTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVCS 835
                 C+ ++ C+  +V C+      +GRCI  +L CNG+NDCGD SDE NC +T   C 
Sbjct: 105  KEVEDCVSNRPCR-SQVRCEGFVCAQTGRCINRRLLCNGDNDCGDQSDEANCRKTYKKCQ 163

Query: 836  RKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDF 1015
            ++     ++  + +G ++      G VL + +  G+C        +  FR P N+EN  F
Sbjct: 164  QEMEQYWAIGSLASGINLFTNNLEGPVLDHRYYAGLCS--PHYILNTRFRKPYNVEN--F 219

Query: 1016 EVQTKXXXXXXXXXXXLIPLENSKD--QQATGFGQEKSSFHV-----PIFYXXXXXXXXX 1174
              QT+           L   E+  D     TG    +SSF +      IF          
Sbjct: 220  IPQTR-----GKYDFTLTEYESYSDFEHNVTGTAISRSSFSLGFKIAGIFELGYSSMSNI 274

Query: 1175 XXXAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALY 1354
                  +  + SH K S F+     ++V ++ +KT++L L   FL+ +  LPLEY+   Y
Sbjct: 275  GQHFISRIRRFSHTK-SKFLHARSDLEVAHYKLKTRNLMLHHEFLQRVKQLPLEYSYGEY 333

Query: 1355 SRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVT-- 1528
              +F DFGTHY T   LGG+Y+     + E +     + +   +C + + K    I +  
Sbjct: 334  RDLFRDFGTHYITEAVLGGIYEYTLIMNKEAMDRGDYSLKNIHDCAKHDFKIGAAITSVY 393

Query: 1529 -KTKVEHRCTTNRMSEKYEGSFLQGSEKS-ISLVKGGRSEYAAALAWEKGSSGPGEKTYS 1702
             K  V     ++ ++E  + +      K  + LV+GG SEY  ALA+++    P      
Sbjct: 394  LKLGVSEAKCSDILNEIKDRNKKDSMVKDLVVLVRGGASEYVTALAYKE---LPTADLMQ 450

Query: 1703 EWLESVKENPAVIDFELAPITDLV--RNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPN 1876
            EW ++V+ NP +I  ++ P+ +LV   +   + T + N+++A  E+  + D CQCAPC  
Sbjct: 451  EWGDAVQYNPDIIKVKVMPLYELVTATDFAYSSTVKQNMKKALEEFQKEVDSCQCAPCQG 510

Query: 1877 NGRPVLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRE 2056
            NG PVL GT C C+C +G  G  CE      K+  +DG W CWS+WS C   +K +R R+
Sbjct: 511  NGVPVLKGTRCECICPAGFQGSACE--VTHRKNVPIDGKWNCWSNWSPCSGGHK-TRQRQ 567

Query: 2057 CNNPAPRQGGKPCDGERRQEEHC 2125
            C NP P  GG PC G   +  +C
Sbjct: 568  CTNPPPGNGGNPCSGPASETLNC 590


>ref|NP_001030441.1| complement component C9 precursor [Bos taurus].
          Length = 548

 Score =  211 bits (538), Expect = 3e-54
 Identities = 133/508 (26%), Positives = 224/508 (44%), Gaps = 33/508 (6%)
 Frame = +2

Query: 527  PINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEV 706
            PI+C +  +  WS CDPC+++ F+ RSI    QF G+ C + +   + C+P++ C+  E 
Sbjct: 38   PIDCRMSSWSEWSKCDPCLKQMFRSRSIEIFGQFNGRKCVDAVGDRQQCVPTEACEDPEE 97

Query: 707  DCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRT-KAVC-SRKYNPIPSVQLMGAG 880
             C N F+C +GRCI ++L CN +NDCGD SDE NC +  +  C +R        +  G G
Sbjct: 98   GCGNDFQCGTGRCIKNRLLCNEDNDCGDYSDEDNCEQDPRPPCRNRVVEESELARTAGFG 157

Query: 881  FHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKXXXXXXXXXX 1060
             +IL  +P      N +  G+C  V        +R P N+ ++ ++ +            
Sbjct: 158  INILGMDPLSTPFDNQYYNGLCDRVWDGNTLTYYRRPWNVASLTYDTKADKNFRTENHEE 217

Query: 1061 XLIPLENSKDQQATGFGQEKSSFHVPI-------FYXXXXXXXXXXXXAFKQAIQA---- 1207
             +  L    +++   F    S  + P+                       K A +A    
Sbjct: 218  SIQILRTIIEEKKLNFNAGLSVKYTPVEAIEKNKCVDLEHSDKGSTSSPSKLAAEAKFRF 277

Query: 1208 --------------SHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNA 1345
                          S K++  F+ +   + +  F M+++D+ L   FL ++N LP  Y  
Sbjct: 278  TYSKDDIYRLLSSYSAKQEKMFLHVKGKVHLGRFVMRSRDVMLQTTFLDSINTLPTTYEK 337

Query: 1346 ALYSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIE---TKKRY 1516
              Y    + +GTHY +SGSLGG+Y+L+Y    + ++   +   + + C+  +   + K  
Sbjct: 338  GEYFAFLETYGTHYSSSGSLGGLYELIYVLDKKSMEQKDIELRDVQRCLGFDLDLSLKVG 397

Query: 1517 FIVTKTKVEHRCTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWE--KGSSGPGE 1690
              VT       C+   M +          +  I+ ++GG  +YA  L  +  +G+     
Sbjct: 398  VEVTGNFDSKLCSKKGMGQTETNPEADLFDDVITFIRGGTRKYATELKEKLLRGARMINV 457

Query: 1691 KTYSEWLESVKENPAVIDFELAPITDLVR-NIPCAVTRRNNLRRAFREYAAKFDPCQCAP 1867
              +  W  S+   P +I  +L PI DL+   +  A  ++ NL RA  +Y  +F   +C P
Sbjct: 458  TDFVNWAASLNHAPVLISQKLVPIYDLIPVKMKDAHLKKQNLERAIEDYINEFSVRKCQP 517

Query: 1868 CPNNGRPVLSGTECLCVCQSGTYGDNCE 1951
            C N G  VL   EC+C C     G  CE
Sbjct: 518  CQNGGTVVLLDGECVCSCPKEFKGVACE 545


>ref|NP_001137207.1| perforin-1 [Bos taurus].
          Length = 554

 Score = 82.8 bits (203), Expect = 2e-15
 Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
 Frame = +2

Query: 1304 FLKALNHLPLEYNAAL---YSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQE 1474
            F +AL  LP  +N +    Y R+   +GTH+  S  LGG    L      EL   GLT  
Sbjct: 192  FKRALKTLPPHFNTSTKPDYHRLISSYGTHFIRSMELGGRISALTXLRTCELALEGLTAS 251

Query: 1475 EAKNCIRIETKKRYFIVTKTKVEHR-CTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAA 1651
            E ++C+ +E +             + C   + + K   SF Q   +  S V GG      
Sbjct: 252  EVEDCLAVEAEVSISDRASASPSFKACEEKKKNHKVGTSFHQAYRERHSNVDGGHHSTMH 311

Query: 1652 ALAWEKGSSGPGEKTYSEWLESVKENPAVIDFELAPITDLVRNIPCAVTRRNNLRRAFRE 1831
             L +    S  G + +S W+ S++++P ++D+ L P+  LV +      RR  LR+A  +
Sbjct: 312  DLLF---GSQAGPEQFSAWVASLQDSPGLVDYTLEPLHMLVES---QDPRREALRQAVSK 365

Query: 1832 YA---AKFDPCQCAPC-PNNGRPVLSGTECLCVCQSGTYGDNCERR-------APDYKSN 1978
            Y    A++  C   PC P   +   +  +C+C   + T  D C R+         ++K++
Sbjct: 366  YVTDRARWRDCN-RPCPPGQHKNPKNPCQCMCPGSAATTQDCCPRQKGLAHLEVMNFKAS 424

Query: 1979 AVDGNWGCWSSWSTCDATY 2035
                  G W  W T    Y
Sbjct: 425  ------GLWGDWITATDAY 437


>ref|NP_001179447.1| netrin receptor UNC5D [Bos taurus].
          Length = 953

 Score = 67.8 bits (164), Expect = 6e-11
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = +2

Query: 1982 VDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEHCTFSIMQNTGQPC 2161
            VDG+W  WS WS C    +  R REC  PAPR GGK C+G  ++ E+CT  +       C
Sbjct: 307  VDGSWEVWSEWSVCSPECEHLRIRECTAPAPRNGGKFCEGLSQESENCTDGL-------C 359

Query: 2162 IGDDEDMKEIDLPEIESDS 2218
            I D + + EI    IE+ S
Sbjct: 360  ILDKKPLHEIKPQSIENAS 378


>ref|XP_002698776.1| PREDICTED: unc-5 homolog D (C. elegans) [Bos taurus].
          Length = 953

 Score = 67.8 bits (164), Expect = 6e-11
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = +2

Query: 1982 VDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEHCTFSIMQNTGQPC 2161
            VDG+W  WS WS C    +  R REC  PAPR GGK C+G  ++ E+CT  +       C
Sbjct: 307  VDGSWEVWSEWSVCSPECEHLRIRECTAPAPRNGGKFCEGLSQESENCTDGL-------C 359

Query: 2162 IGDDEDMKEIDLPEIESDS 2218
            I D + + EI    IE+ S
Sbjct: 360  ILDKKPLHEIKPQSIENAS 378


>ref|XP_002696487.1| PREDICTED: sema domain, seven thrombospondin repeats (type 1 and type
            1-like), transmembrane domain (TM) and short cytoplasmic
            domain, (semaphorin) 5A [Bos taurus].
          Length = 1073

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 41/99 (41%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
 Frame = +2

Query: 1874 NNGRPVLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATY---KRS 2044
            NN  P   G  CL        G + E +  +     VDG W CWSSWSTC AT       
Sbjct: 811  NNPEPKFGGMPCL--------GPSLEYQECNILPCPVDGMWSCWSSWSTCSATCGGGHYM 862

Query: 2045 RTRECNNPAPRQGGKPCDGERRQEEHCTFSIMQNTGQPC 2161
            RTR C NPAP  GG  C G   +E  C      NT QPC
Sbjct: 863  RTRSCTNPAPAYGGDICLGLHTEEALC------NT-QPC 894



 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 1955 RAPDYKSNAVDGNWGCWSSWSTCDATYKR---SRTRECNNPAPRQGGKPCDGERRQEEHC 2125
            RA  Y ++ V+G W  W+SWS C     R   +R R CNNP P+ GG PC G   + + C
Sbjct: 773  RAGRYSAHTVNGAWSAWTSWSQCSRDCSRGIRNRKRVCNNPEPKFGGMPCLGPSLEYQEC 832



 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
 Frame = +2

Query: 1937 GDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYK---RSRTRECNNPAPRQGGKPCDGER 2107
            G  C+    +  + + +G W  W+SWS C  T     + R R C+NP PR GG+ C G+ 
Sbjct: 578  GWQCQGPRMEIANCSRNGGWTPWTSWSPCSTTCGIGFQVRQRSCSNPTPRHGGRVCVGQN 637

Query: 2108 RQEEHC 2125
            R+E +C
Sbjct: 638  REERYC 643


>ref|XP_583112.4| PREDICTED: sema domain, seven thrombospondin repeats (type 1 and type
            1-like), transmembrane domain (TM) and short cytoplasmic
            domain, (semaphorin) 5A [Bos taurus].
          Length = 1051

 Score = 65.5 bits (158), Expect = 3e-10
 Identities = 41/99 (41%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
 Frame = +2

Query: 1874 NNGRPVLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATY---KRS 2044
            NN  P   G  CL        G + E +  +     VDG W CWSSWSTC AT       
Sbjct: 789  NNPEPKFGGMPCL--------GPSLEYQECNILPCPVDGMWSCWSSWSTCSATCGGGHYM 840

Query: 2045 RTRECNNPAPRQGGKPCDGERRQEEHCTFSIMQNTGQPC 2161
            RTR C NPAP  GG  C G   +E  C      NT QPC
Sbjct: 841  RTRSCTNPAPAYGGDICLGLHTEEALC------NT-QPC 872



 Score = 57.4 bits (137), Expect = 8e-08
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 1955 RAPDYKSNAVDGNWGCWSSWSTCDATYKR---SRTRECNNPAPRQGGKPCDGERRQEEHC 2125
            RA  Y ++ V+G W  W+SWS C     R   +R R CNNP P+ GG PC G   + + C
Sbjct: 751  RAGRYSAHTVNGAWSAWTSWSQCSRDCSRGIRNRKRVCNNPEPKFGGMPCLGPSLEYQEC 810



 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
 Frame = +2

Query: 1937 GDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYK---RSRTRECNNPAPRQGGKPCDGER 2107
            G  C+    +  + + +G W  W+SWS C  T     + R R C+NP PR GG+ C G+ 
Sbjct: 556  GWQCQGPRMEIANCSRNGGWTPWTSWSPCSTTCGIGFQVRQRSCSNPTPRHGGRVCVGQN 615

Query: 2108 RQEEHC 2125
            R+E +C
Sbjct: 616  REERYC 621


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 130,489,364
Number of extensions: 3533188
Number of successful extensions: 12969
Number of sequences better than 1.0e-05: 70
Number of HSP's gapped: 12514
Number of HSP's successfully gapped: 105
Length of query: 1141
Length of database: 17,681,374
Length adjustment: 113
Effective length of query: 1028
Effective length of database: 13,942,430
Effective search space: 14332818040
Effective search space used: 14332818040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVRM1_0081_E01
         (3424 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_536488.2| PREDICTED: similar to Complement component C6 p...  1629   0.0  
Alignment   gi|XP_868028.1| PREDICTED: similar to Complement component C6 p...  1621   0.0  
Alignment   gi|XP_536489.2| PREDICTED: similar to complement component 6 [C...   758   0.0  
Alignment   gi|XP_546339.2| PREDICTED: similar to complement component 7 pr...   411   e-114
Alignment   gi|XP_536695.2| PREDICTED: similar to complement component 8, a...   297   5e-80
Alignment   gi|XP_536694.2| PREDICTED: similar to Complement component C8 b...   276   7e-74
Alignment   gi|XP_536494.2| PREDICTED: similar to Complement component C9 p...   185   2e-46
Alignment   gi|XP_868034.1| PREDICTED: similar to complement component 7 pr...    97   1e-19
Alignment   gi|NP_001184111.1| perforin-1 precursor [Canis lupus familiaris].     79   2e-14
Alignment   gi|XP_851680.1| PREDICTED: similar to complement component (3b/...    65   6e-10

>ref|XP_536488.2| PREDICTED: similar to Complement component C6 precursor isoform 1
            [Canis familiaris].
          Length = 936

 Score = 1629 bits (4219), Expect = 0.0
 Identities = 754/934 (80%), Positives = 827/934 (88%), Gaps = 2/934 (0%)
 Frame = +2

Query: 293  MDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGXXXXXXXXXXNQYYLDNF 472
            M   S+LYFILLS LIDK Q CFCDHYPW+QWSSCSKTCN G          +QYYLDNF
Sbjct: 1    MAGQSILYFILLSALIDKCQPCFCDHYPWSQWSSCSKTCNFGTQSRQRKIVVDQYYLDNF 60

Query: 473  CDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEP 652
            CD+LCTK ETRECNWQ CPINCLLGDYGPWSDCDPCVEKQFKVRSIL P+QFGGQPCTEP
Sbjct: 61   CDQLCTKSETRECNWQRCPINCLLGDYGPWSDCDPCVEKQFKVRSILRPSQFGGQPCTEP 120

Query: 653  LMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVC 832
            L+TF+PCIPSKLCKIEE+DCKNKFRCDSGRCIA+KLECNGENDCGDNSDERNCGR KAVC
Sbjct: 121  LVTFQPCIPSKLCKIEEIDCKNKFRCDSGRCIANKLECNGENDCGDNSDERNCGRAKAVC 180

Query: 833  --SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLEN 1006
               R++NPIPSVQLMGAGFH LAGEPRGEVL NSFTGGICKTVKSSKASNP+RVPANLEN
Sbjct: 181  PGKRQWNPIPSVQLMGAGFHFLAGEPRGEVLDNSFTGGICKTVKSSKASNPYRVPANLEN 240

Query: 1007 VDFEVQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXA 1186
            V+FEVQTK           LI L  +++QQ    G+E+SS ++PIFY            A
Sbjct: 241  VNFEVQTKEDDLETDFYKDLISLTKNENQQGLFGGEEQSSLYIPIFYSSKKTQSTTHNSA 300

Query: 1187 FKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIF 1366
            FKQAIQASHKKDSSF RIHKVI+VLNFTMKTKDLQLSDVFLKALNHLPLEYN ALYSRIF
Sbjct: 301  FKQAIQASHKKDSSFTRIHKVIEVLNFTMKTKDLQLSDVFLKALNHLPLEYNFALYSRIF 360

Query: 1367 DDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEH 1546
            DDFGTHY+TSGSLGGVYDLLYQ+S EEL+ SGLT++E +NC+  ETKK     +K +VEH
Sbjct: 361  DDFGTHYYTSGSLGGVYDLLYQYSAEELRTSGLTEKEIQNCVSTETKKSVLFFSKKEVEH 420

Query: 1547 RCTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKE 1726
            RCTTN+MS+KYEGSFLQG+EKSISL++GGRS+YAAALAWEKGSS P EK +SEWLESVKE
Sbjct: 421  RCTTNKMSKKYEGSFLQGAEKSISLIQGGRSKYAAALAWEKGSSVPTEKEFSEWLESVKE 480

Query: 1727 NPAVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTE 1906
            NP VIDFELAPITDLVRNIPCAVTRRNNLR+AFREYAAKFDPC CAPCPNNGRP LSGTE
Sbjct: 481  NPVVIDFELAPITDLVRNIPCAVTRRNNLRKAFREYAAKFDPCWCAPCPNNGRPTLSGTE 540

Query: 1907 CLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGG 2086
            CLCVC SGTYGDNCERR+PDYKSNAVDGNW CWSSWSTCDATYKRSRTRECNNPAP+QGG
Sbjct: 541  CLCVCHSGTYGDNCERRSPDYKSNAVDGNWSCWSSWSTCDATYKRSRTRECNNPAPQQGG 600

Query: 2087 KPCDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNE 2266
            KPC+GE+RQEE CTFS+M+N GQ CI DDE++KEIDLPEIESDSGCP+PV PENGFIRNE
Sbjct: 601  KPCEGEQRQEEDCTFSVMENNGQACISDDEEVKEIDLPEIESDSGCPRPVSPENGFIRNE 660

Query: 2267 KTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPF 2446
            K LYSVGE+VEI+C TGFKTVGYQYFRCLPDRTWRRGDVEC++T CL PVV EVL +SPF
Sbjct: 661  KKLYSVGEEVEILCFTGFKTVGYQYFRCLPDRTWRRGDVECRKTQCLKPVVQEVLTISPF 720

Query: 2447 QRLYKIGDSIELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQDFLTRLKGHCQPGQK 2626
            QRLY+IG+SIEL+CPKGFV+AGPSRYTCS DSWTPPIS+SLTCE+D LT+LKGHCQPGQK
Sbjct: 721  QRLYRIGESIELTCPKGFVVAGPSRYTCSEDSWTPPISNSLTCEKDVLTKLKGHCQPGQK 780

Query: 2627 QLGSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQ 2806
            QLGSEC+C+SPEEDCSH+SEDLCV DTD++HYFT SACKFLAEKCLNNQQL FLHIGSCQ
Sbjct: 781  QLGSECICMSPEEDCSHYSEDLCVFDTDTSHYFTLSACKFLAEKCLNNQQLHFLHIGSCQ 840

Query: 2807 DGPQLEWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQCLKGGYQHYCV 2986
            DGPQLEWGLER  LSS+STK E CGYDTCY WE+CSA+ SKC+CLLP QC KGG Q YCV
Sbjct: 841  DGPQLEWGLERRILSSNSTKKEPCGYDTCYDWEKCSASVSKCVCLLPPQCFKGGSQLYCV 900

Query: 2987 KMGSSTTTRTMNICEVGAIRCALRKMEILYPGRC 3088
            KMGSS + +T+NICEVGAIRCA RK++ILYPGRC
Sbjct: 901  KMGSSLSEKTVNICEVGAIRCANRKVDILYPGRC 934


>ref|XP_868028.1| PREDICTED: similar to Complement component C6 precursor isoform 2
            [Canis familiaris].
          Length = 936

 Score = 1621 bits (4197), Expect = 0.0
 Identities = 751/934 (80%), Positives = 825/934 (88%), Gaps = 2/934 (0%)
 Frame = +2

Query: 293  MDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGXXXXXXXXXXNQYYLDNF 472
            M   S+LYFILLS LIDK Q CFCDHYPW+QWSSCSKTCN G          +QYYLDNF
Sbjct: 1    MAGQSILYFILLSALIDKCQPCFCDHYPWSQWSSCSKTCNFGTQSRQRKIVVDQYYLDNF 60

Query: 473  CDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEP 652
            CD+LCTK ETRECNWQ CPINCLLGDYGPWSDCDPCVEKQFKVRSIL P+QFGGQPCTEP
Sbjct: 61   CDQLCTKSETRECNWQRCPINCLLGDYGPWSDCDPCVEKQFKVRSILRPSQFGGQPCTEP 120

Query: 653  LMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVC 832
            L+TF+PCIPSKLCKIEE+DCKNKFRCDSGRCIA+KLECNGENDCGDNSDERNCGR KAVC
Sbjct: 121  LVTFQPCIPSKLCKIEEIDCKNKFRCDSGRCIANKLECNGENDCGDNSDERNCGRAKAVC 180

Query: 833  --SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLEN 1006
               R++NPIPSVQLMGAGFH LAGEPRGEVL NSFTGGICKTVKSSKASNP+RVPANLEN
Sbjct: 181  PGKRQWNPIPSVQLMGAGFHFLAGEPRGEVLDNSFTGGICKTVKSSKASNPYRVPANLEN 240

Query: 1007 VDFEVQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXA 1186
            V+FEVQTK           LI L  +++QQ    G+E+SS ++PIFY            A
Sbjct: 241  VNFEVQTKEDDLETDFYKDLISLTKNENQQGLFGGEEQSSLYIPIFYSSKKTQSTTHNSA 300

Query: 1187 FKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIF 1366
            FKQAIQASHKKDSSF RIHKVI+VLNFTMKTKDLQLSDVFLKALNHLPLEYN ALYSRIF
Sbjct: 301  FKQAIQASHKKDSSFTRIHKVIEVLNFTMKTKDLQLSDVFLKALNHLPLEYNFALYSRIF 360

Query: 1367 DDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEH 1546
            DDFGTHY+TSGSLGGVYDLLYQ+S EEL+ SGLT++E +NC+  ETKK     +K +VEH
Sbjct: 361  DDFGTHYYTSGSLGGVYDLLYQYSAEELRTSGLTEKEIQNCVSTETKKSVLFFSKKEVEH 420

Query: 1547 RCTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKE 1726
            RCTTN+MS+KYEGSFLQG+EKSISL++GGRS+YAAALAWEKGSS P EK +SEWLESVKE
Sbjct: 421  RCTTNKMSKKYEGSFLQGAEKSISLIQGGRSKYAAALAWEKGSSVPTEKEFSEWLESVKE 480

Query: 1727 NPAVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTE 1906
            NP VIDFELAPITDLVRNIPCAVTRRNNLR+AFREYAAKFDPC CAPCPNNGRP LSGTE
Sbjct: 481  NPVVIDFELAPITDLVRNIPCAVTRRNNLRKAFREYAAKFDPCWCAPCPNNGRPTLSGTE 540

Query: 1907 CLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGG 2086
            CLCVC SGTYGDNCERR+PDYKSNAVDGNW CWSSWSTCDATYKRSRTRECNNPAP+QGG
Sbjct: 541  CLCVCHSGTYGDNCERRSPDYKSNAVDGNWSCWSSWSTCDATYKRSRTRECNNPAPQQGG 600

Query: 2087 KPCDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNE 2266
            KPC+GE+RQEE CTFS+M+N GQ CI DDE++KEIDLPEIESDSGCP+PV PENGFIRNE
Sbjct: 601  KPCEGEQRQEEDCTFSVMENNGQACISDDEEVKEIDLPEIESDSGCPRPVSPENGFIRNE 660

Query: 2267 KTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPF 2446
            K LYSVGE+VEI+C TGFKTVGYQYFRCLPDRTWRRGDVEC++T CL PVV EVL +SPF
Sbjct: 661  KKLYSVGEEVEILCFTGFKTVGYQYFRCLPDRTWRRGDVECRKTQCLKPVVQEVLTISPF 720

Query: 2447 QRLYKIGDSIELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQDFLTRLKGHCQPGQK 2626
            QRLY+IG+SIEL+CPKGFV+AGPSRYTCS DSWTPPIS+SLTCE++  T L+GHCQPGQK
Sbjct: 721  QRLYRIGESIELTCPKGFVVAGPSRYTCSEDSWTPPISNSLTCEKEPNTVLRGHCQPGQK 780

Query: 2627 QLGSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQ 2806
            QLGSEC+C+SPEEDCSH+SEDLCV DTD++HYFT SACKFLAEKCLNNQQL FLHIGSCQ
Sbjct: 781  QLGSECICMSPEEDCSHYSEDLCVFDTDTSHYFTLSACKFLAEKCLNNQQLHFLHIGSCQ 840

Query: 2807 DGPQLEWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQCLKGGYQHYCV 2986
            DGPQLEWGLER  LSS+STK E CGYDTCY WE+CSA+ SKC+CLLP QC KGG Q YCV
Sbjct: 841  DGPQLEWGLERRILSSNSTKKEPCGYDTCYDWEKCSASVSKCVCLLPPQCFKGGSQLYCV 900

Query: 2987 KMGSSTTTRTMNICEVGAIRCALRKMEILYPGRC 3088
            KMGSS + +T+NICEVGAIRCA RK++ILYPGRC
Sbjct: 901  KMGSSLSEKTVNICEVGAIRCANRKVDILYPGRC 934


>ref|XP_536489.2| PREDICTED: similar to complement component 6 [Canis familiaris].
          Length = 2211

 Score =  758 bits (1958), Expect = 0.0
 Identities = 359/456 (78%), Positives = 391/456 (85%)
 Frame = +2

Query: 1217 KDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDDFGTHYFTS 1396
            +DSSF RIHKVI+VLNFTMKTKDLQLSDVFLKALNHLPLEYN ALYSRIFDDFGTHY+TS
Sbjct: 221  EDSSFTRIHKVIEVLNFTMKTKDLQLSDVFLKALNHLPLEYNFALYSRIFDDFGTHYYTS 280

Query: 1397 GSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRCTTNRMSEK 1576
            GSLGGVYDLLYQ+S EEL+ SG                                      
Sbjct: 281  GSLGGVYDLLYQYSAEELRTSG-------------------------------------- 302

Query: 1577 YEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKENPAVIDFELA 1756
               SFLQG+EKSISL++GGRS+YAAALAWEKGSS P EK +SEWLESVKENP VIDFELA
Sbjct: 303  ---SFLQGAEKSISLIQGGRSKYAAALAWEKGSSVPTEKEFSEWLESVKENPVVIDFELA 359

Query: 1757 PITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECLCVCQSGTY 1936
            PITDLVRNIPCAVTRRNNLR+AFREYAAKFDPC CAPCPNNGRP LSGTECLCVC SGTY
Sbjct: 360  PITDLVRNIPCAVTRRNNLRKAFREYAAKFDPCWCAPCPNNGRPTLSGTECLCVCHSGTY 419

Query: 1937 GDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQE 2116
            GDNCERR+PDYKSNAVDGNW CWSSWSTCDATYKRSRTRECNNPAP+QGGKPC+GE+RQE
Sbjct: 420  GDNCERRSPDYKSNAVDGNWSCWSSWSTCDATYKRSRTRECNNPAPQQGGKPCEGEQRQE 479

Query: 2117 EHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNEKTLYSVGEDV 2296
            E CTFS+M+N GQ CI DDE++KEIDLPEIESDSGCP+PV PENGFIRNEK LYSVGE+V
Sbjct: 480  EDCTFSVMENNGQACISDDEEVKEIDLPEIESDSGCPRPVSPENGFIRNEKKLYSVGEEV 539

Query: 2297 EIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQRLYKIGDSI 2476
            EI+C TGFKTVGYQYFRCLPDRTWRRGDVEC++T CL PVV EVL +SPFQRLY+IG+SI
Sbjct: 540  EILCFTGFKTVGYQYFRCLPDRTWRRGDVECRKTQCLKPVVQEVLTISPFQRLYRIGESI 599

Query: 2477 ELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQD 2584
            EL+CPKGFV+AGPSRYTCS DSWTPPIS+SLTCE++
Sbjct: 600  ELTCPKGFVVAGPSRYTCSEDSWTPPISNSLTCEKE 635



 Score =  382 bits (982), Expect = e-105
 Identities = 172/192 (89%), Positives = 183/192 (95%), Gaps = 2/192 (1%)
 Frame = +2

Query: 449  NQYYLDNFCDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQF 628
            +QYYLDNFCD+LCTK ETRECNWQ CPINCLLGDYGPWSDCDPCVEKQFKVRSIL P+QF
Sbjct: 30   DQYYLDNFCDQLCTKSETRECNWQRCPINCLLGDYGPWSDCDPCVEKQFKVRSILRPSQF 89

Query: 629  GGQPCTEPLMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERN 808
            GGQPCTEPL+TF+PCIPSKLCKIEE+DCKNKFRCDSGRCIA+KLECNGENDCGDNSDERN
Sbjct: 90   GGQPCTEPLVTFQPCIPSKLCKIEEIDCKNKFRCDSGRCIANKLECNGENDCGDNSDERN 149

Query: 809  CGRTKAVC--SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPF 982
            CGR KAVC   R++NPIPSVQLMGAGFH LAGEPRGEVL NSFTGGICKTVKSSKASNP+
Sbjct: 150  CGRAKAVCPGKRQWNPIPSVQLMGAGFHFLAGEPRGEVLDNSFTGGICKTVKSSKASNPY 209

Query: 983  RVPANLENVDFE 1018
            RVPANLENV+FE
Sbjct: 210  RVPANLENVNFE 221


>ref|XP_546339.2| PREDICTED: similar to complement component 7 precursor isoform 1
            [Canis familiaris].
          Length = 863

 Score =  411 bits (1056), Expect = e-114
 Identities = 250/872 (28%), Positives = 417/872 (47%), Gaps = 15/872 (1%)
 Frame = +2

Query: 527  PINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEV 706
            P+NC    Y PWS+C+ C + Q   RS+    Q+GG PC       +PC P++ C  EE 
Sbjct: 25   PVNCQWDTYAPWSECNGCTKTQTHRRSVAVYGQYGGHPCVGSAFETQPCEPTRGCPTEE- 83

Query: 707  DCKNKFRCDSGRCIASKLECNGENDCG-DNSDERNCGRTKAVCSRKYN-PIPSVQLMGAG 880
             C  +FRC SG+CI+  L CNG++DC  D++DE  C  +++  S   + P P+++L G G
Sbjct: 84   GCGERFRCFSGQCISKSLVCNGDSDCEEDSADEDKCEDSESRPSCDLDQPPPNIELTGNG 143

Query: 881  FHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKXXXXXXXXXX 1060
            ++ L G+ + +V+     GG C+ V S   +  +R+  N+ +  F+V+            
Sbjct: 144  YNELTGQFKNKVINTKSFGGQCRKVFSGDGNFFYRLSGNILSYTFQVKINNDFNYEFYNS 203

Query: 1061 XLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFKQAIQASHKKDSSFIRI 1240
                ++++  +  +   ++KSS                         +    K+   + +
Sbjct: 204  SWSYVKHTSAEYTSS--RKKSSLF--------SSSSSSSYNRISHTSKTHENKNHQLLIV 253

Query: 1241 HKVIKVLNFTMKTKD-LQLSDVFLKALNHLPLEYNAALYSRIFDDFGTHYFTSGSLGGVY 1417
               ++V  F     + L L++ F K L+ LP  Y+ + Y R+ D +GTHY  SGSLGG Y
Sbjct: 254  QNTVEVAQFVNNNPEFLHLAEPFWKELSLLPPLYDYSAYRRLIDQYGTHYLQSGSLGGEY 313

Query: 1418 DLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRCTTNRMSEKYEGSFLQ 1597
             +++   + +LK  GL   + K C        ++  ++ K +      +     +G+ ++
Sbjct: 314  KVVFYVDSRKLKQRGLGSVDMKECAASTFNFLFYASSENKCKDLEDVLKSDSGTQGNMVR 373

Query: 1598 GSEKSISLVKGGRSEYAAALAWEKGSSGPGEK-TYSEWLESVKENPAVIDFELAPITDLV 1774
            G       V+GG  ++ A L+  +  +  G K  Y+ W ESV   P VI  +L P+ +LV
Sbjct: 374  GDP----YVRGGSLDFVAGLSKLQLDNPAGNKGRYASWAESVTRLPQVIKQKLTPLYELV 429

Query: 1775 RNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECLCVCQSGTYGDNCER 1954
            + +PCA  +R  L+RA  EY  +FDPC C PC N G   + GT+C C C+  T+G  CE+
Sbjct: 430  KEVPCASVKRLYLKRALEEYLDEFDPCHCRPCQNGGIATVEGTQCQCHCKPYTFGVACEQ 489

Query: 1955 R-APDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEHCTF 2131
                  ++  VDG W CWSSW+ C    K++R RECNNP P +GG+ C GE R+   C  
Sbjct: 490  GFLVGNEAGGVDGGWNCWSSWTPC-VQGKKTRHRECNNPPPSEGGQSCIGEPRESSPC-- 546

Query: 2132 SIMQNTGQPCIGDDEDMKEIDLPE-------IESDSGCPQPVPPENGFIRNEKTLYSVGE 2290
                        +DE+++ + L E       +     CP P   ++GF++++  ++ VG 
Sbjct: 547  ------------EDEELQHLRLIEPHCFPLSLVPKEFCPSPPALKDGFVQDKGAMFPVGT 594

Query: 2291 DVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQRLYKIGD 2470
            +V   C  G+  +G    RC  D  W  G++ CQ+  C+LP + + ++  P +  Y +G+
Sbjct: 595  NVVYTCNEGYSLIGDPVARCGDDLQWLVGEMRCQKIACVLPPLKDGIQSHPHKPFYGVGE 654

Query: 2471 SIELSCPKGFVIAGPSRYTC-SGDSWTPPISSSLTCEQDF-LTRLKGHCQPGQKQLGSEC 2644
             + +SC  G  + GPS + C S   W+P + +    ++D  L      CQ  +K   S C
Sbjct: 655  KVTISCSGGMSLEGPSAFLCGSSLKWSPDMKNVQCVKKDAPLIPAGPKCQRWEKLQNSRC 714

Query: 2645 VCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDGPQLE 2824
            VC  P E  S  S D+C  D  S      + CK              +H+  CQ      
Sbjct: 715  VCKMPYECGS--SLDVCARDERSKRILPLTVCK--------------MHVLHCQGRNYTL 758

Query: 2825 WGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQC-LKGGYQHYCVKMGSS 3001
             G +   L +++ K  +CG   C  W +C A + +C+C    +C  + G    C ++  +
Sbjct: 759  AGSDSCTLPAATEK--ACG--ACPLWGKCDAASGRCVCREASECEAEDGGSAVCAQVDGA 814

Query: 3002 TTTRTMNICEVGAIRCALRKMEILYPGRCRSN 3097
               +T++ C  GA+RC  + + +     C +N
Sbjct: 815  --LQTLSECAAGALRCRGQSVTVTGTRPCTAN 844


>ref|XP_536695.2| PREDICTED: similar to complement component 8, alpha polypeptide
            precursor [Canis familiaris].
          Length = 589

 Score =  297 bits (760), Expect = 5e-80
 Identities = 182/571 (31%), Positives = 276/571 (48%), Gaps = 35/571 (6%)
 Frame = +2

Query: 518  QTCPIN---CLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKL 688
            Q+ PI    C L ++  W+DC PC +K+++ RS+L P++FGG  C+  +     C     
Sbjct: 33   QSAPITAVPCQLSNWSEWTDCFPCQDKKYRYRSLLQPDKFGGTICSGDVWDQASCHSPTA 92

Query: 689  CKIEEVDCKNKFRC-DSGRCIASKLECNGENDCGDNSDERNCGRTKAV---CSRKYNPIP 856
            C + +  C   F+C ++GRC+   L CNG+ DC D SDE +C   +     CS+ Y PIP
Sbjct: 93   C-LHQAQCGQDFQCKETGRCLKRHLVCNGDKDCLDGSDEDDCEDVRVAENDCSQ-YEPIP 150

Query: 857  SVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSK-----------------ASNPFR 985
              +    G++IL  +    V    + GG C+TV + +                     FR
Sbjct: 151  GSESAALGYNILTQKEAQHVYDPRYYGGQCETVYNGEWREIRYDPTCERLYYGEDEKYFR 210

Query: 986  VPANLENVDFEV--QTKXXXXXXXXXXXLIPLENSKDQQATGF--GQEKSSFHVPIFYXX 1153
             P N     FE    T+           L+    + +  +TG   G   +   V +    
Sbjct: 211  KPYNFLKYHFEALADTRFSSELYDDAHDLLSKVKNNNFVSTGVTVGVSFTGSSVTVDVGV 270

Query: 1154 XXXXXXXXXXAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPL 1333
                        K+     +KK  SF+R+   ++  +F M+  ++ L +  L++L  LP 
Sbjct: 271  SSSQNSSSLDELKKY----NKKKYSFLRVFTKVQTAHFKMRRGNIVLDEGMLQSLMELPE 326

Query: 1334 EYNAALYSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKR 1513
            +YN  +Y++  +D+GTHY TSGS+GG+Y+ +   + EE+++  +T  + + C  I     
Sbjct: 327  QYNYGMYAKFINDYGTHYITSGSMGGIYEHILVLNKEEMESQRITSRDIEKCFGISVGIE 386

Query: 1514 YFIVTKTKV-----EHRCTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSS 1678
            Y      K+        C      +          E  ISLV+GG S + A LA EK S+
Sbjct: 387  YDYANWMKIGGSLGGKGCENIGGGDSKGHRLTTAVEDIISLVRGGSSGWGAGLA-EKRST 445

Query: 1679 GPGEKTYSEWLESVKENPAVIDFELAPITDLVRNIPCA--VTRRNNLRRAFREYAAKFDP 1852
                 TY  W  S+K NP VIDFE+ PI +++R+       T+R NL RA  +Y  +F+ 
Sbjct: 446  ----ITYRSWGRSLKYNPVVIDFEMQPIHEVLRHTTLGPLETKRQNLHRALDQYLMEFNA 501

Query: 1853 CQCAPCPNNGRPVLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDAT 2032
            C+C PC NNG+P+L GT C C C  G  G +CE+   + K    DG+W CWSSWS C A 
Sbjct: 502  CRCGPCFNNGKPILEGTSCKCQCPLGRKGLSCEQM--EQKGAKADGHWSCWSSWSACRAG 559

Query: 2033 YKRSRTRECNNPAPRQGGKPCDGERRQEEHC 2125
              + R RECNNP P+ GG  C G + Q + C
Sbjct: 560  -TQERRRECNNPTPQNGGASCPGWKAQTQAC 589


>ref|XP_536694.2| PREDICTED: similar to Complement component C8 beta chain precursor
            (Complement component 8 beta subunit) [Canis familiaris].
          Length = 590

 Score =  276 bits (707), Expect = 7e-74
 Identities = 167/567 (29%), Positives = 275/567 (48%), Gaps = 17/567 (2%)
 Frame = +2

Query: 476  DRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPL 655
            + L   ++TR  +    PI+C L  +  W+ CDPC +K+++  S+L P+QF G+PC    
Sbjct: 45   ESLAKSRQTRSVDVTLMPIDCELSSWSSWTMCDPCQKKRYRHASLLRPSQFYGEPCNFSD 104

Query: 656  MTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVCS 835
                 C+ S+ C+  +V C+      +GRC+  +L CNG+NDCGD SDE NC R    C 
Sbjct: 105  KEVEDCVTSRPCR-SQVRCEGFVCAQTGRCVNRRLLCNGDNDCGDQSDEANCRRIYKKCQ 163

Query: 836  RKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDF 1015
             +     ++  + +G ++      G VL + +  G C        +  FR P N+E+   
Sbjct: 164  HEMEQYWAIGRLASGVNLFTNSFEGPVLDHRYYAGGCSP--HYILNTRFRKPYNVESYTP 221

Query: 1016 EVQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSS------FHVPIFYXXXXXXXXXX 1177
            + Q K           L   E+  D +      E+S+      F +P  +          
Sbjct: 222  QTQGKYKFA-------LTAYESYSDFEHNITKTERSTSSFSFGFKIPEIFEFGISMASDN 274

Query: 1178 XXAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYS 1357
               F   I+      S+F+     ++V ++ +K + L L   FL+ +  LPLEY+   Y 
Sbjct: 275  GKHFISRIKRFSHTKSTFLHARSDLEVAHYKLKPRSLMLHYEFLQRVKLLPLEYSYGEYR 334

Query: 1358 RIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETK-----KRYFI 1522
             +F DFGTHY T   LGG+Y+     + E ++ +  + +  + C + + K     K+ ++
Sbjct: 335  DLFRDFGTHYITEAVLGGIYEYTLIMNKEAMERADYSLKAIQTCAQNDFKIGAAIKKIYV 394

Query: 1523 ---VTKTKVEHRCTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEK 1693
               V+    EH      + ++ + + +   E  + LV+GG SE+   LA+++    P   
Sbjct: 395  NLGVSVDTCEH--ILREIGDRNKRNTM--VEDLVVLVRGGASEHITTLAYKE---LPTAD 447

Query: 1694 TYSEWLESVKENPAVIDFELAPITDLV--RNIPCAVTRRNNLRRAFREYAAKFDPCQCAP 1867
               EW ++V+ NP +I  +  P+ +LV   +   + T R N++RA  E+  +   C+CAP
Sbjct: 448  LMQEWGDAVQYNPDIIKIKAEPLYELVTATDFAYSSTVRQNMKRALEEFQKEVSSCRCAP 507

Query: 1868 CPNNGRPVLSGTECLCVCQSGTYGDNCERRAPDYKSN-AVDGNWGCWSSWSTCDATYKRS 2044
            C  NG PVL  + C C+C  G+ G  CE     Y+ N A+DG W CWS+WS C   +K +
Sbjct: 508  CQGNGVPVLKESRCDCICPIGSRGPACE---VTYEKNVAIDGRWNCWSNWSPCSGGHK-T 563

Query: 2045 RTRECNNPAPRQGGKPCDGERRQEEHC 2125
            R R+CNNP P+  G PC G   +  +C
Sbjct: 564  RQRQCNNPPPQNEGSPCLGPASETLNC 590


>ref|XP_536494.2| PREDICTED: similar to Complement component C9 precursor [Canis
            familiaris].
          Length = 589

 Score =  185 bits (470), Expect = 2e-46
 Identities = 142/529 (26%), Positives = 225/529 (42%), Gaps = 45/529 (8%)
 Frame = +2

Query: 500  TRECNWQTCPINCLLGDYGPWSDCDPCVEK------------QFKVRSILHPNQFGGQPC 643
            TRE N    P++C +  +  WS+CDPC+++            QF  RSI    QF GQ  
Sbjct: 41   TRE-NDTPFPVDCRMSSWSQWSECDPCLKQMVKILIFPAGFVQFPSRSIQVFRQFKGQKG 99

Query: 644  TEPLMTFRPCIPSKLCKIEEVDCKN-KFRCDSGRCIASKLECNGENDCGDNSDERNC-GR 817
               L       P   C   E D     F C +GRCI  +L CNG+NDCGD SDE +C   
Sbjct: 100  VAALGNRGHWDPGDPCAPGEEDWGGGDFGCRTGRCIKKRLLCNGDNDCGDFSDEDDCESD 159

Query: 818  TKAVCSRKY-NPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPA 994
             +  C  K        ++ G G +IL  EP      N +  G+C  V+       +R P 
Sbjct: 160  PRLPCREKVVEESELARMAGYGINILGMEPLSTPFDNEYYNGLCDRVRDGNTLVYYRRPW 219

Query: 995  NLENVDFE----------------------VQTKXXXXXXXXXXXLIPLENSKDQQATGF 1108
            N+ ++ +E                      VQ K           L P E  +  +    
Sbjct: 220  NVASLVYETKADKNFRTEYYEEQIESFKKIVQEKTSNFKADIALKLTPTEAIEKCKINPE 279

Query: 1109 GQEKSSFHVPIFYXXXXXXXXXXXXAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDL 1288
            G++ S     I               ++  +  S KK+  F+ +  VI +  F M+++D+
Sbjct: 280  GED-SPRDSSINAESKFQFTYSKNEIYQLFLTHSSKKEKVFLHVKGVIHLGRFVMRSRDV 338

Query: 1289 QLSDVFLKALNHLPLEYNAALYSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLT 1468
             L+  FL  +  LP  Y    Y    + +GTHY +SGSLGG Y+L+Y      ++  G+ 
Sbjct: 339  MLTTTFLDDIKALPSTYEKGEYFAFLETYGTHYSSSGSLGGYYELIYVLDKASMEEKGVE 398

Query: 1469 QEEAKNCIRIETKKRYFIVTKTKVEHRCTTNRMSEKYEGSFLQGS-----EKSISLVKGG 1633
              + + C+       + +    ++  +   +   ++ EG  +  S     +  ISL++GG
Sbjct: 399  LRDVQRCLGFNLD--FSLEAGVEISGKLNKDDCLKRGEGETVNISSDGIIDDVISLIRGG 456

Query: 1634 RSEYAAALAWE--KGSSGPGEKTYSEWLESVKENPAVIDFELAPITDLVR-NIPCAVTRR 1804
              +YA  L  +  KG+       ++ W  S+ + P +I+ +L+PI +L+   I  A  ++
Sbjct: 457  TQKYAYELKEKLLKGAKTIDITDFTNWATSLNDAPVLINHKLSPIYNLIPVQIKDAHLKK 516

Query: 1805 NNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECLCVCQSGTYGDNCE 1951
             NL  A  +Y  +F   +C  C N G  +L   ECLC C     G  CE
Sbjct: 517  QNLESAIEDYINEFSVRKCDQCKNGGTIILLEGECLCSCPIEFTGIACE 565


>ref|XP_868034.1| PREDICTED: similar to complement component 7 precursor isoform 2
           [Canis familiaris].
          Length = 143

 Score = 96.7 bits (239), Expect = 1e-19
 Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
 Frame = +2

Query: 527 PINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEV 706
           P+NC    Y PWS+C+ C + Q   RS+    Q+GG PC       +PC P++ C  EE 
Sbjct: 25  PVNCQWDTYAPWSECNGCTKTQTHRRSVAVYGQYGGHPCVGSAFETQPCEPTRGCPTEE- 83

Query: 707 DCKNKFRCDSGRCIASKLECNGENDC-GDNSDERNC--GRTKAVCSRKYNPIPSVQLMGA 877
            C  +FRC SG+CI+  L CNG++DC  D++DE  C    ++  C     P P+++L G 
Sbjct: 84  GCGERFRCFSGQCISKSLVCNGDSDCEEDSADEDKCEDSESRPSCDLD-QPPPNIELTGN 142

Query: 878 G 880
           G
Sbjct: 143 G 143


>ref|NP_001184111.1| perforin-1 precursor [Canis lupus familiaris].
          Length = 555

 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
 Frame = +2

Query: 1304 FLKALNHLPLEYNAAL---YSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQE 1474
            F +AL+ LP  +N +    Y R+  ++GTH+  S  LGG    L      EL   GLT +
Sbjct: 193  FQRALSDLPPNFNTSTEADYLRLISNYGTHFIRSMELGGRTLALTALRTCELALEGLTAD 252

Query: 1475 EAKNCIRIETKKRYFIVTKTKVEHR-CTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAA 1651
            E  +C+ +E +           E + C   +   K   SF Q  ++  S + GG     +
Sbjct: 253  EVSDCLTVEAQVSISDHANPSSEFKACEEKKKKHKMTTSFHQAYQERFSEIIGGHHTSMS 312

Query: 1652 ALAWEKGSSGPGEKTYSEWLESVKENPAVIDFELAPITDLVRNIPCAVTRRNNLRRAFRE 1831
             L +    +  G + +S W+ S+ + P ++D+ L P+  L+ +      RR  LR+A  +
Sbjct: 313  DLLF---GNQAGPEQFSAWMASLLDRPGLVDYTLEPLHVLLES---QDPRREALRQAVSK 366

Query: 1832 YA---AKFDPCQCAPCPNNGRPVLSGTECLCVCQSG--TYGDNCERR 1957
            Y    A++  C   PCP  G+       C CVC +   T  D C R+
Sbjct: 367  YVMDRARWKNCS-RPCP-PGQQKSPHNPCHCVCHNSGITNQDCCPRQ 411


>ref|XP_851680.1| PREDICTED: similar to complement component (3b/4b) receptor 1 isoform
            F precursor [Canis familiaris].
          Length = 227

 Score = 64.7 bits (156), Expect = 6e-10
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
 Frame = +2

Query: 2216 SGCPQPVPPENG-FIRNEKTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQ 2392
            + CP P    NG +I    + Y  G  V   C  G+  VG  +  C    TW + D  C+
Sbjct: 36   TACPYPPKIHNGHYIGRHVSPYLPGMIVSYACDPGYLLVGRAFIFCTYQGTWSQFDHYCK 95

Query: 2393 RTDCLLP-VVPEVLKLSPFQRLYKIGDSIELSCPKGFVIAGPSRYTC-SGDSWTPPISSS 2566
               C+LP  +  + K    +++Y  GD++   C  G+ + G  +  C + D+W PP++  
Sbjct: 96   EIKCILPEFMNGIQKKLHMRKVYHYGDNVTFECEVGYTLKGSRQSQCQADDTWNPPLAVC 155

Query: 2567 LTCEQDFLT 2593
             +  +D LT
Sbjct: 156  TSSTRDALT 164


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 135,996,791
Number of extensions: 3632858
Number of successful extensions: 12767
Number of sequences better than 1.0e-05: 64
Number of HSP's gapped: 12346
Number of HSP's successfully gapped: 103
Length of query: 1141
Length of database: 18,874,504
Length adjustment: 114
Effective length of query: 1027
Effective length of database: 15,074,200
Effective search space: 15481203400
Effective search space used: 15481203400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVRM1_0081_E01
         (3424 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001108603.2| complement component C6 precursor [Homo sapi...  1618   0.0  
Alignment   gi|NP_000056.2| complement component C6 precursor [Homo sapiens].   1618   0.0  
Alignment   gi|NP_000578.2| complement component C7 precursor [Homo sapiens].    432   e-120
Alignment   gi|NP_000553.1| complement component C8 alpha chain precursor [...   299   1e-80
Alignment   gi|NP_000057.1| complement component C8 beta chain preproprotei...   278   2e-74
Alignment   gi|NP_001728.1| complement component C9 precursor [Homo sapiens].    218   3e-56
Alignment   gi|NP_001076585.1| perforin-1 precursor [Homo sapiens].               90   1e-17
Alignment   gi|NP_005032.2| perforin-1 precursor [Homo sapiens].                  90   1e-17
Alignment   gi|NP_940857.2| SCO-spondin precursor [Homo sapiens].                 67   1e-10
Alignment   gi|NP_543148.2| netrin receptor UNC5D precursor [Homo sapiens].       66   2e-10

>ref|NP_001108603.2| complement component C6 precursor [Homo sapiens].
          Length = 934

 Score = 1618 bits (4190), Expect = 0.0
 Identities = 744/932 (79%), Positives = 825/932 (88%)
 Frame = +2

Query: 293  MDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGXXXXXXXXXXNQYYLDNF 472
            M + SVLYFILL+ LI+K QACFCDHY WTQW+SCSKTCNSG          ++YY +NF
Sbjct: 1    MARRSVLYFILLNALINKGQACFCDHYAWTQWTSCSKTCNSGTQSRHRQIVVDKYYQENF 60

Query: 473  CDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEP 652
            C+++C+KQETRECNWQ CPINCLLGD+GPWSDCDPC+EKQ KVRS+L P+QFGGQPCT P
Sbjct: 61   CEQICSKQETRECNWQRCPINCLLGDFGPWSDCDPCIEKQSKVRSVLRPSQFGGQPCTAP 120

Query: 653  LMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVC 832
            L+ F+PCIPSKLCKIEE DCKNKFRCDSGRCIA KLECNGENDCGDNSDER+CGRTKAVC
Sbjct: 121  LVAFQPCIPSKLCKIEEADCKNKFRCDSGRCIARKLECNGENDCGDNSDERDCGRTKAVC 180

Query: 833  SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVD 1012
            +RKYNPIPSVQLMG GFH LAGEPRGEVL NSFTGGICKTVKSS+ SNP+RVPANLENV 
Sbjct: 181  TRKYNPIPSVQLMGNGFHFLAGEPRGEVLDNSFTGGICKTVKSSRTSNPYRVPANLENVG 240

Query: 1013 FEVQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFK 1192
            FEVQT            L  L ++++QQ +   Q  SSF VPIFY            AFK
Sbjct: 241  FEVQTAEDDLKTDFYKDLTSLGHNENQQGSFSSQGGSSFSVPIFYSSKRSENINHNSAFK 300

Query: 1193 QAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDD 1372
            QAIQASHKKDSSFIRIHKV+KVLNFT K KDL LSDVFLKALNHLPLEYN+ALYSRIFDD
Sbjct: 301  QAIQASHKKDSSFIRIHKVMKVLNFTTKAKDLHLSDVFLKALNHLPLEYNSALYSRIFDD 360

Query: 1373 FGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRC 1552
            FGTHYFTSGSLGGVYDLLYQFS+EELKNSGLT+EEAK+C+RIETKKR     KTKVEHRC
Sbjct: 361  FGTHYFTSGSLGGVYDLLYQFSSEELKNSGLTEEEAKHCVRIETKKRVLFAKKTKVEHRC 420

Query: 1553 TTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKENP 1732
            TTN++SEK+EGSF+QG+EKSISL++GGRSEY AALAWEKGSSG  EKT+SEWLESVKENP
Sbjct: 421  TTNKLSEKHEGSFIQGAEKSISLIRGGRSEYGAALAWEKGSSGLEEKTFSEWLESVKENP 480

Query: 1733 AVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECL 1912
            AVIDFELAPI DLVRNIPCAVT+RNNLR+A +EYAAKFDPCQCAPCPNNGRP LSGTECL
Sbjct: 481  AVIDFELAPIVDLVRNIPCAVTKRNNLRKALQEYAAKFDPCQCAPCPNNGRPTLSGTECL 540

Query: 1913 CVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKP 2092
            CVCQSGTYG+NCE+++PDYKSNAVDG WGCWSSWSTCDATYKRSRTRECNNPAP++GGK 
Sbjct: 541  CVCQSGTYGENCEKQSPDYKSNAVDGQWGCWSSWSTCDATYKRSRTRECNNPAPQRGGKR 600

Query: 2093 CDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNEKT 2272
            C+GE+RQEE CTFSIM+N GQPCI DDE+MKE+DLPEIE+DSGCPQPVPPENGFIRNEK 
Sbjct: 601  CEGEKRQEEDCTFSIMENNGQPCINDDEEMKEVDLPEIEADSGCPQPVPPENGFIRNEKQ 660

Query: 2273 LYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQR 2452
            LY VGEDVEI CLTGF+TVGYQYFRCLPD TWR+GDVECQRT+C+ PVV EVL ++PFQR
Sbjct: 661  LYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQR 720

Query: 2453 LYKIGDSIELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQDFLTRLKGHCQPGQKQL 2632
            LY+IG+SIEL+CPKGFV+AGPSRYTC G+SWTPPIS+SLTCE+D LT+LKGHCQ GQKQ 
Sbjct: 721  LYRIGESIELTCPKGFVVAGPSRYTCQGNSWTPPISNSLTCEKDTLTKLKGHCQLGQKQS 780

Query: 2633 GSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDG 2812
            GSEC+C+SPEEDCSHHSEDLCV DTDSN YFTS ACKFLAEKCLNNQQL FLHIGSCQDG
Sbjct: 781  GSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDG 840

Query: 2813 PQLEWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQCLKGGYQHYCVKM 2992
             QLEWGLER +LSS+STK ESCGYDTCY WE+CSA+TSKC+CLLP QC KGG Q YCVKM
Sbjct: 841  RQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKM 900

Query: 2993 GSSTTTRTMNICEVGAIRCALRKMEILYPGRC 3088
            GSST+ +T+NICEVG IRCA RKMEIL+PG+C
Sbjct: 901  GSSTSEKTLNICEVGTIRCANRKMEILHPGKC 932


>ref|NP_000056.2| complement component C6 precursor [Homo sapiens].
          Length = 934

 Score = 1618 bits (4190), Expect = 0.0
 Identities = 744/932 (79%), Positives = 825/932 (88%)
 Frame = +2

Query: 293  MDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGXXXXXXXXXXNQYYLDNF 472
            M + SVLYFILL+ LI+K QACFCDHY WTQW+SCSKTCNSG          ++YY +NF
Sbjct: 1    MARRSVLYFILLNALINKGQACFCDHYAWTQWTSCSKTCNSGTQSRHRQIVVDKYYQENF 60

Query: 473  CDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEP 652
            C+++C+KQETRECNWQ CPINCLLGD+GPWSDCDPC+EKQ KVRS+L P+QFGGQPCT P
Sbjct: 61   CEQICSKQETRECNWQRCPINCLLGDFGPWSDCDPCIEKQSKVRSVLRPSQFGGQPCTAP 120

Query: 653  LMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVC 832
            L+ F+PCIPSKLCKIEE DCKNKFRCDSGRCIA KLECNGENDCGDNSDER+CGRTKAVC
Sbjct: 121  LVAFQPCIPSKLCKIEEADCKNKFRCDSGRCIARKLECNGENDCGDNSDERDCGRTKAVC 180

Query: 833  SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVD 1012
            +RKYNPIPSVQLMG GFH LAGEPRGEVL NSFTGGICKTVKSS+ SNP+RVPANLENV 
Sbjct: 181  TRKYNPIPSVQLMGNGFHFLAGEPRGEVLDNSFTGGICKTVKSSRTSNPYRVPANLENVG 240

Query: 1013 FEVQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFK 1192
            FEVQT            L  L ++++QQ +   Q  SSF VPIFY            AFK
Sbjct: 241  FEVQTAEDDLKTDFYKDLTSLGHNENQQGSFSSQGGSSFSVPIFYSSKRSENINHNSAFK 300

Query: 1193 QAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDD 1372
            QAIQASHKKDSSFIRIHKV+KVLNFT K KDL LSDVFLKALNHLPLEYN+ALYSRIFDD
Sbjct: 301  QAIQASHKKDSSFIRIHKVMKVLNFTTKAKDLHLSDVFLKALNHLPLEYNSALYSRIFDD 360

Query: 1373 FGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRC 1552
            FGTHYFTSGSLGGVYDLLYQFS+EELKNSGLT+EEAK+C+RIETKKR     KTKVEHRC
Sbjct: 361  FGTHYFTSGSLGGVYDLLYQFSSEELKNSGLTEEEAKHCVRIETKKRVLFAKKTKVEHRC 420

Query: 1553 TTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKENP 1732
            TTN++SEK+EGSF+QG+EKSISL++GGRSEY AALAWEKGSSG  EKT+SEWLESVKENP
Sbjct: 421  TTNKLSEKHEGSFIQGAEKSISLIRGGRSEYGAALAWEKGSSGLEEKTFSEWLESVKENP 480

Query: 1733 AVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECL 1912
            AVIDFELAPI DLVRNIPCAVT+RNNLR+A +EYAAKFDPCQCAPCPNNGRP LSGTECL
Sbjct: 481  AVIDFELAPIVDLVRNIPCAVTKRNNLRKALQEYAAKFDPCQCAPCPNNGRPTLSGTECL 540

Query: 1913 CVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKP 2092
            CVCQSGTYG+NCE+++PDYKSNAVDG WGCWSSWSTCDATYKRSRTRECNNPAP++GGK 
Sbjct: 541  CVCQSGTYGENCEKQSPDYKSNAVDGQWGCWSSWSTCDATYKRSRTRECNNPAPQRGGKR 600

Query: 2093 CDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNEKT 2272
            C+GE+RQEE CTFSIM+N GQPCI DDE+MKE+DLPEIE+DSGCPQPVPPENGFIRNEK 
Sbjct: 601  CEGEKRQEEDCTFSIMENNGQPCINDDEEMKEVDLPEIEADSGCPQPVPPENGFIRNEKQ 660

Query: 2273 LYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQR 2452
            LY VGEDVEI CLTGF+TVGYQYFRCLPD TWR+GDVECQRT+C+ PVV EVL ++PFQR
Sbjct: 661  LYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQR 720

Query: 2453 LYKIGDSIELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQDFLTRLKGHCQPGQKQL 2632
            LY+IG+SIEL+CPKGFV+AGPSRYTC G+SWTPPIS+SLTCE+D LT+LKGHCQ GQKQ 
Sbjct: 721  LYRIGESIELTCPKGFVVAGPSRYTCQGNSWTPPISNSLTCEKDTLTKLKGHCQLGQKQS 780

Query: 2633 GSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDG 2812
            GSEC+C+SPEEDCSHHSEDLCV DTDSN YFTS ACKFLAEKCLNNQQL FLHIGSCQDG
Sbjct: 781  GSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHIGSCQDG 840

Query: 2813 PQLEWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQCLKGGYQHYCVKM 2992
             QLEWGLER +LSS+STK ESCGYDTCY WE+CSA+TSKC+CLLP QC KGG Q YCVKM
Sbjct: 841  RQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKM 900

Query: 2993 GSSTTTRTMNICEVGAIRCALRKMEILYPGRC 3088
            GSST+ +T+NICEVG IRCA RKMEIL+PG+C
Sbjct: 901  GSSTSEKTLNICEVGTIRCANRKMEILHPGKC 932


>ref|NP_000578.2| complement component C7 precursor [Homo sapiens].
          Length = 843

 Score =  432 bits (1111), Expect = e-120
 Identities = 263/856 (30%), Positives = 421/856 (49%), Gaps = 15/856 (1%)
 Frame = +2

Query: 527  PINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEV 706
            P+NC    Y PWS+C+ C + Q + RS+    Q+GGQPC       + C P++ C  EE 
Sbjct: 25   PVNCQWDFYAPWSECNGCTKTQTRRRSVAVYGQYGGQPCVGNAFETQSCEPTRGCPTEE- 83

Query: 707  DCKNKFRCDSGRCIASKLECNGENDCG-DNSDERNCGRTKAVCSRKYN-PIPSVQLMGAG 880
             C  +FRC SG+CI+  L CNG++DC  D++DE  C  ++   S   + P P+++L G G
Sbjct: 84   GCGERFRCFSGQCISKSLVCNGDSDCDEDSADEDRCEDSERRPSCDIDKPPPNIELTGNG 143

Query: 881  FHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKXXXXXXXXXX 1060
            ++ L G+ R  V+     GG C+ V S    + +R+  N+ +  F+V+            
Sbjct: 144  YNELTGQFRNRVINTKSFGGQCRKVFSGDGKDFYRLSGNVLSYTFQVKINNDFNYEFYNS 203

Query: 1061 XLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFKQAIQASHK-KDSSFIR 1237
                ++++  +  T   +++S F                  ++       HK K    + 
Sbjct: 204  TWSYVKHTSTEH-TSSSRKRSFFR----------SSSSSSRSYTSHTNEIHKGKSYQLLV 252

Query: 1238 IHKVIKVLNFTMKTKD-LQLSDVFLKALNHLPLEYNAALYSRIFDDFGTHYFTSGSLGGV 1414
            +   ++V  F     + LQL++ F K L+HLP  Y+ + Y R+ D +GTHY  SGSLGG 
Sbjct: 253  VENTVEVAQFINNNPEFLQLAEPFWKELSHLPSLYDYSAYRRLIDQYGTHYLQSGSLGGE 312

Query: 1415 YDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRCTTNRMSEKYEGSFL 1594
            Y +L+   +E+LK +     E K C   ++   +F+V  +   H C     + K      
Sbjct: 313  YRVLFYVDSEKLKQNDFNSVEEKKC---KSSGWHFVVKFSS--HGCKELENALKAASGTQ 367

Query: 1595 QGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKT-YSEWLESVKENPAVIDFELAPITDL 1771
                +    ++GG + + + L++ +  +  G K  YS W ESV   P VI  +L P+ +L
Sbjct: 368  NNVLRGEPFIRGGGAGFISGLSYLELDNPAGNKRRYSAWAESVTNLPQVIKQKLTPLYEL 427

Query: 1772 VRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECLCVCQSGTYGDNCE 1951
            V+ +PCA  ++  L+ A  EY  +FDPC C PC N G   + GT CLC C+  T+G  CE
Sbjct: 428  VKEVPCASVKKLYLKWALEEYLDEFDPCHCRPCQNGGLATVEGTHCLCHCKPYTFGAACE 487

Query: 1952 RRA-PDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEHCT 2128
            +      ++  VDG W CWSSWS C    K++R+RECNNP P  GG+ C GE  +   C 
Sbjct: 488  QGVLVGNQAGGVDGGWSCWSSWSPC-VQGKKTRSRECNNPPPSGGGRSCVGETTESTQC- 545

Query: 2129 FSIMQNTGQPCIGDDEDMKEIDLPE-------IESDSGCPQPVPPENGFIRNEKTLYSVG 2287
                         +DE+++ + L E       +     CP P   ++GF+++E T++ VG
Sbjct: 546  -------------EDEELEHLRLLEPHCFPLSLVPTEFCPSPPALKDGFVQDEGTMFPVG 592

Query: 2288 EDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQRLYKIG 2467
            ++V   C  G+  +G    RC  D  W  G++ CQ+  C+LPV+ + ++  P +  Y +G
Sbjct: 593  KNVVYTCNEGYSLIGNPVARCGEDLRWLVGEMHCQKIACVLPVLMDGIQSHPQKPFYTVG 652

Query: 2468 DSIELSCPKGFVIAGPSRYTC-SGDSWTPPISSSLTCEQDF-LTRLKGHCQPGQKQLGSE 2641
            + + +SC  G  + GPS + C S   W+P + ++   +++  LT+    CQ  +K   S 
Sbjct: 653  EKVTVSCSGGMSLEGPSAFLCGSSLKWSPEMKNARCVQKENPLTQAVPKCQRWEKLQNSR 712

Query: 2642 CVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDGPQL 2821
            CVC  P E C   S D+C  D  S      + CK              +H+  CQ     
Sbjct: 713  CVCKMPYE-CG-PSLDVCAQDERSKRILPLTVCK--------------MHVLHCQGRNYT 756

Query: 2822 EWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQCLKGGYQHYCVKMGSS 3001
              G +   L +S+ K  +CG   C  W +C A +SKC+C    +C + G+   CV++   
Sbjct: 757  LTGRDSCTLPASAEK--ACG--ACPLWGKCDAESSKCVCREASECEEEGFS-ICVEVNGK 811

Query: 3002 TTTRTMNICEVGAIRC 3049
               +TM+ CE GA+RC
Sbjct: 812  --EQTMSECEAGALRC 825


>ref|NP_000553.1| complement component C8 alpha chain precursor [Homo sapiens].
          Length = 584

 Score =  299 bits (766), Expect = 1e-80
 Identities = 175/559 (31%), Positives = 268/559 (47%), Gaps = 27/559 (4%)
 Frame = +2

Query: 530  INCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEVD 709
            + C L ++  W+DC PC +K+++ RS+L PN+FGG  C+  +     C  S  C + +  
Sbjct: 37   VTCQLSNWSEWTDCFPCQDKKYRHRSLLQPNKFGGTICSGDIWDQASCSSSTTC-VRQAQ 95

Query: 710  CKNKFRC-DSGRCIASKLECNGENDCGDNSDERNCGRTKAV---CSRKYNPIPSVQLMGA 877
            C   F+C ++GRC+   L CNG+ DC D SDE +C   +A+   CS+ Y PIP  Q    
Sbjct: 96   CGQDFQCKETGRCLKRHLVCNGDQDCLDGSDEDDCEDVRAIDEDCSQ-YEPIPGSQKAAL 154

Query: 878  GFHILAGEPRGEVLGNSFTGGICKTVKSSK-----------------ASNPFRVPANLEN 1006
            G++IL  E    V   S+ GG C+TV + +                     FR P N   
Sbjct: 155  GYNILTQEDAQSVYDASYYGGQCETVYNGEWRELRYDSTCERLYYGDDEKYFRKPYNFLK 214

Query: 1007 VDFEVQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXA 1186
              FE                  L   K  ++  FG                        +
Sbjct: 215  YHFEALADTGISSEFYDNANDLLSKVKKDKSDSFGVTIGIGPAGSPLLVGVGVSHSQDTS 274

Query: 1187 FKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIF 1366
            F   +   ++K   F RI   ++  +F M+  D+ L +  L++L  LP +YN  +Y++  
Sbjct: 275  FLNELNKYNEKKFIFTRIFTKVQTAHFKMRKDDIMLDEGMLQSLMELPDQYNYGMYAKFI 334

Query: 1367 DDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNC----IRIETKKRYFIVTKT 1534
            +D+GTHY TSGS+GG+Y+ +      ++++ G+T  +   C    + I+ + +  +    
Sbjct: 335  NDYGTHYITSGSMGGIYEYILVIDKAKMESLGITSRDITTCFGGSLGIQYEDKINVGGGL 394

Query: 1535 KVEHRCTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLE 1714
              +H C      +          E  IS V+GG S ++  LA  + +      TY  W  
Sbjct: 395  SGDH-CKKFGGGKTERARKAMAVEDIISRVRGGSSGWSGGLAQNRSTI-----TYRSWGR 448

Query: 1715 SVKENPAVIDFELAPITDLVRNIPCA--VTRRNNLRRAFREYAAKFDPCQCAPCPNNGRP 1888
            S+K NP VIDFE+ PI +++R+        +R NLRRA  +Y  +F+ C+C PC NNG P
Sbjct: 449  SLKYNPVVIDFEMQPIHEVLRHTSLGPLEAKRQNLRRALDQYLMEFNACRCGPCFNNGVP 508

Query: 1889 VLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNP 2068
            +L GT C C C+ G+ G  CE+   +      DG+W CWSSWS C A   + R REC+NP
Sbjct: 509  ILEGTSCRCQCRLGSLGAACEQTQTE--GAKADGSWSCWSSWSVCRAGI-QERRRECDNP 565

Query: 2069 APRQGGKPCDGERRQEEHC 2125
            AP+ GG  C G + Q + C
Sbjct: 566  APQNGGASCPGRKVQTQAC 584


>ref|NP_000057.1| complement component C8 beta chain preproprotein [Homo sapiens].
          Length = 591

 Score =  278 bits (711), Expect = 2e-74
 Identities = 164/555 (29%), Positives = 268/555 (48%), Gaps = 10/555 (1%)
 Frame = +2

Query: 494  QETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPC 673
            ++ R  +    PI+C L  +  W+ CDPC +K+++   +L P+QF G+PC         C
Sbjct: 51   RQMRSVDVTLMPIDCELSSWSSWTTCDPCQKKRYRYAYLLQPSQFHGEPCNFSDKEVEDC 110

Query: 674  IPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVCSRKYNPI 853
            + ++ C   +V C+      +GRC+  +L CNG+NDCGD SDE NC R    C  + +  
Sbjct: 111  VTNRPCG-SQVRCEGFVCAQTGRCVNRRLLCNGDNDCGDQSDEANCRRIYKKCQHEMDQY 169

Query: 854  PSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKX 1033
              +  + +G ++      G VL + +  G C        +  FR P N+E+   + Q K 
Sbjct: 170  WGIGSLASGINLFTNSFEGPVLDHRYYAGGCSP--HYILNTRFRKPYNVESYTPQTQGKY 227

Query: 1034 XXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVP-IFYXXXXXXXXXXXXAFKQAIQAS 1210
                           N  ++ A+  G     F +P IF               ++  + S
Sbjct: 228  EFILKEYESYSDFERNVTEKMASKSGFS-FGFKIPGIFELGISSQSDRGKHYIRRTKRFS 286

Query: 1211 HKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDDFGTHYF 1390
            H K S F+     ++V ++ +K + L L   FL+ +  LPLEY+   Y  +F DFGTHY 
Sbjct: 287  HTK-SVFLHARSDLEVAHYKLKPRSLMLHYEFLQRVKRLPLEYSYGEYRDLFRDFGTHYI 345

Query: 1391 TSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETK------KRYFIVTKTKVEHRC 1552
            T   LGG+Y+     + E ++    T      C + + K      + Y  +  +  + R 
Sbjct: 346  TEAVLGGIYEYTLVMNKEAMERGDYTLNNVHACAKNDFKIGGAIEEVYVSLGVSVGKCRG 405

Query: 1553 TTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKENP 1732
              N + ++ +   +   E  + LV+GG SE+   LA+++    P      EW ++V+ NP
Sbjct: 406  ILNEIKDRNKRDTM--VEDLVVLVRGGASEHITTLAYQE---LPTADLMQEWGDAVQYNP 460

Query: 1733 AVIDFELAPITDLV--RNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTE 1906
            A+I  ++ P+ +LV   +   + T R N+++A  E+  +   C CAPC  NG PVL G+ 
Sbjct: 461  AIIKVKVEPLYELVTATDFAYSSTVRQNMKQALEEFQKEVSSCHCAPCQGNGVPVLKGSR 520

Query: 1907 CLCVCQSGTYGDNCERRAPDYKSNA-VDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQG 2083
            C C+C  G+ G  CE     Y+ N  +DG W CWS+WS+C    +++R R+CNNP P+ G
Sbjct: 521  CDCICPVGSQGLACE---VSYRKNTPIDGKWNCWSNWSSCSGR-RKTRQRQCNNPPPQNG 576

Query: 2084 GKPCDGERRQEEHCT 2128
            G PC G   +   C+
Sbjct: 577  GSPCSGPASETLDCS 591


>ref|NP_001728.1| complement component C9 precursor [Homo sapiens].
          Length = 559

 Score =  218 bits (555), Expect = 3e-56
 Identities = 140/517 (27%), Positives = 230/517 (44%), Gaps = 32/517 (6%)
 Frame = +2

Query: 497  ETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCI 676
            E  E +     I+C +  +  WS CDPC+ + F+ RSI    QF G+ CT+ +   R C+
Sbjct: 30   ELTESSGSASHIDCRMSPWSEWSQCDPCLRQMFRSRSIEVFGQFNGKRCTDAVGDRRQCV 89

Query: 677  PSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNC-GRTKAVC-SRKYNP 850
            P++ C+  E DC N F+C +GRCI  +L CNG+NDCGD SDE +C    +  C  R    
Sbjct: 90   PTEPCEDAEDDCGNDFQCSTGRCIKMRLRCNGDNDCGDFSDEDDCESEPRPPCRDRVVEE 149

Query: 851  IPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFE---- 1018
                +  G G +IL  +P      N F  G+C   +       +R P N+ ++ +E    
Sbjct: 150  SELARTAGYGINILGMDPLSTPFDNEFYNGLCNRDRDGNTLTYYRRPWNVASLIYETKGE 209

Query: 1019 ------------------VQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIF 1144
                              +Q K             P E +K +Q      E+++  + + 
Sbjct: 210  KNFRTEHYEEQIEAFKSIIQEKTSNFNAAISLKFTPTETNKAEQCC----EETASSISLH 265

Query: 1145 YXXXXXXXXXXXXAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNH 1324
                          ++  +  S KK+  F+ +   I +  F M+ +D+ L+  F+  +  
Sbjct: 266  GKGSFRFSYSKNETYQLFLSYSSKKEKMFLHVKGEIHLGRFVMRNRDVVLTTTFVDDIKA 325

Query: 1325 LPLEYNAALYSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIET 1504
            LP  Y    Y    + +GTHY +SGSLGG+Y+L+Y      +K  G+  ++ K C+    
Sbjct: 326  LPTTYEKGEYFAFLETYGTHYSSSGSLGGLYELIYVLDKASMKRKGVELKDIKRCLGYHL 385

Query: 1505 KKRYFIVTKTKVEHRCTTNRMSEKYEGSFLQGSEKS-----ISLVKGGRSEYAAALAWEK 1669
                   ++  V      +   ++ EG  +  + ++     +SL++GG  +YA  L  EK
Sbjct: 386  DVS-LAFSEISVGAEFNKDDCVKRGEGRAVNITSENLIDDVVSLIRGGTRKYAFELK-EK 443

Query: 1670 GSSGP--GEKTYSEWLESVKENPAVIDFELAPITDLVR-NIPCAVTRRNNLRRAFREYAA 1840
               G       +  W  S+ + P +I  +L+PI +LV   +  A  ++ NL RA  +Y  
Sbjct: 444  LLRGTVIDVTDFVNWASSINDAPVLISQKLSPIYNLVPVKMKNAHLKKQNLERAIEDYIN 503

Query: 1841 KFDPCQCAPCPNNGRPVLSGTECLCVCQSGTYGDNCE 1951
            +F   +C  C N G  +L   +CLC C     G  CE
Sbjct: 504  EFSVRKCHTCQNGGTVILMDGKCLCACPFKFEGIACE 540


>ref|NP_001076585.1| perforin-1 precursor [Homo sapiens].
          Length = 555

 Score = 90.1 bits (222), Expect = 1e-17
 Identities = 75/254 (29%), Positives = 104/254 (40%), Gaps = 10/254 (3%)
 Frame = +2

Query: 1304 FLKALNHLPLEYNAAL---YSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQE 1474
            F +AL  LP  +NA+    Y R+  ++GTH+  +  LGG    L      EL   GLT  
Sbjct: 193  FKRALGDLPHHFNASTQPAYLRLISNYGTHFIRAVELGGRISALTALRTCELALEGLTDN 252

Query: 1475 EAKNCIRIETKKRYFIVTKTKVEHR-CTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAA 1651
            E ++C+ +E +    I      E + C   +   K   SF Q   +  S V GG      
Sbjct: 253  EVEDCLTVEAQVNIGIHGSISAEAKACEEKKKKHKMTASFHQTYRERHSEVVGGHHTSIN 312

Query: 1652 ALAWEKGSSGPGEKTYSEWLESVKENPAVIDFELAPITDLVRNIPCAVTRRNNLRRAFRE 1831
             L +       G + YS W+ S+  +P ++D+ L P+  L   +     RR  LRRA  +
Sbjct: 313  DLLF---GIQAGPEQYSAWVNSLPGSPGLVDYTLEPLHVL---LDSQDPRREALRRALSQ 366

Query: 1832 Y---AAKFDPCQCAPCPNNGRPVLSGTECLCVCQSG--TYGDNCER-RAPDYKSNAVDGN 1993
            Y    A++  C   PCP  GR       C CVC     T  D C R R            
Sbjct: 367  YLTDRARWRDCS-RPCP-PGRQKSPRDPCQCVCHGSAVTTQDCCPRQRGLAQLEVTFIQA 424

Query: 1994 WGCWSSWSTCDATY 2035
            WG W  W T    Y
Sbjct: 425  WGLWGDWFTATDAY 438


>ref|NP_005032.2| perforin-1 precursor [Homo sapiens].
          Length = 555

 Score = 90.1 bits (222), Expect = 1e-17
 Identities = 75/254 (29%), Positives = 104/254 (40%), Gaps = 10/254 (3%)
 Frame = +2

Query: 1304 FLKALNHLPLEYNAAL---YSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQE 1474
            F +AL  LP  +NA+    Y R+  ++GTH+  +  LGG    L      EL   GLT  
Sbjct: 193  FKRALGDLPHHFNASTQPAYLRLISNYGTHFIRAVELGGRISALTALRTCELALEGLTDN 252

Query: 1475 EAKNCIRIETKKRYFIVTKTKVEHR-CTTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAA 1651
            E ++C+ +E +    I      E + C   +   K   SF Q   +  S V GG      
Sbjct: 253  EVEDCLTVEAQVNIGIHGSISAEAKACEEKKKKHKMTASFHQTYRERHSEVVGGHHTSIN 312

Query: 1652 ALAWEKGSSGPGEKTYSEWLESVKENPAVIDFELAPITDLVRNIPCAVTRRNNLRRAFRE 1831
             L +       G + YS W+ S+  +P ++D+ L P+  L   +     RR  LRRA  +
Sbjct: 313  DLLF---GIQAGPEQYSAWVNSLPGSPGLVDYTLEPLHVL---LDSQDPRREALRRALSQ 366

Query: 1832 Y---AAKFDPCQCAPCPNNGRPVLSGTECLCVCQSG--TYGDNCER-RAPDYKSNAVDGN 1993
            Y    A++  C   PCP  GR       C CVC     T  D C R R            
Sbjct: 367  YLTDRARWRDCS-RPCP-PGRQKSPRDPCQCVCHGSAVTTQDCCPRQRGLAQLEVTFIQA 424

Query: 1994 WGCWSSWSTCDATY 2035
            WG W  W T    Y
Sbjct: 425  WGLWGDWFTATDAY 438


>ref|NP_940857.2| SCO-spondin precursor [Homo sapiens].
          Length = 5147

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
 Frame = +2

Query: 1853 CQCAPCPNNGRPVLSGTECLCVCQSGTYGDNCERRA-PDYKSNAVDGNWGCWSSWSTCDA 2029
            C C    + G P        C  ++G  G   +R A P Y +  VDG WG W  WS CD 
Sbjct: 3435 CACPTPQHGGAP--------CTGEAGEAGAQHQREACPSYATCPVDGAWGPWGPWSPCDM 3486

Query: 2030 TYKRS-RTRECNNPAPRQGGKPCDGERRQEEHCTFSIMQNT-----------GQPCIGDD 2173
               +S R+R C+ P   +GG+PC G   Q   C  +  Q T           GQPC    
Sbjct: 3487 CLGQSHRSRACSRPPTPEGGRPCPGNHTQSRPCQENSTQCTDCGGGQSLHPCGQPCPRSC 3546

Query: 2174 EDM 2182
            +D+
Sbjct: 3547 QDL 3549



 Score = 54.7 bits (130), Expect = 6e-07
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 1949 ERRAPDYKSNAVDGNWGCWSSWSTCDATY---KRSRTRECNNPAPRQGGKPCDGERRQEE 2119
            ERR  + ++  V G W  WS WS CD +    +  R+R C++P  + GG PC GER Q  
Sbjct: 3992 ERRFCNLRACPVPGGWSRWSPWSWCDRSCGGGQSLRSRSCSSPPSKNGGAPCAGERHQAR 4051

Query: 2120 HC 2125
             C
Sbjct: 4052 LC 4053


>ref|NP_543148.2| netrin receptor UNC5D precursor [Homo sapiens].
          Length = 953

 Score = 65.9 bits (159), Expect = 2e-10
 Identities = 32/79 (40%), Positives = 42/79 (53%)
 Frame = +2

Query: 1982 VDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEHCTFSIMQNTGQPC 2161
            VDG+W  WS WS C    +  R REC  P PR GGK C+G  ++ E+CT  +       C
Sbjct: 307  VDGSWEVWSEWSVCSPECEHLRIRECTAPPPRNGGKFCEGLSQESENCTDGL-------C 359

Query: 2162 IGDDEDMKEIDLPEIESDS 2218
            I D + + EI    IE+ S
Sbjct: 360  ILDKKPLHEIKPQSIENAS 378


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 134,144,266
Number of extensions: 3619803
Number of successful extensions: 13086
Number of sequences better than 1.0e-05: 54
Number of HSP's gapped: 12684
Number of HSP's successfully gapped: 74
Length of query: 1141
Length of database: 18,297,164
Length adjustment: 113
Effective length of query: 1028
Effective length of database: 14,572,232
Effective search space: 14980254496
Effective search space used: 14980254496
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVRM1_0081_E01
         (3424 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001090918.1| complement component C6 [Sus scrofa].            1902   0.0  
Alignment   gi|XP_003359813.1| PREDICTED: complement component C6-like [Sus...   511   e-144
Alignment   gi|NP_999447.1| complement component C7 precursor [Sus scrofa].      430   e-120
Alignment   gi|NP_001090919.1| complement component C8 alpha chain [Sus scr...   301   2e-81
Alignment   gi|NP_001090920.1| complement component C8B [Sus scrofa].            252   1e-66
Alignment   gi|NP_001090917.1| complement component C9 [Sus scrofa].             207   3e-53
Alignment   gi|XP_003133422.1| PREDICTED: LOW QUALITY PROTEIN: netrin recep...    66   1e-10
Alignment   gi|XP_003122123.1| PREDICTED: sushi, von Willebrand factor type...    64   7e-10
Alignment   gi|NP_999446.1| complement factor H [Sus scrofa].                     63   1e-09
Alignment   gi|XP_003130436.2| PREDICTED: hemicentin-1-like [Sus scrofa].         61   5e-09

>ref|NP_001090918.1| complement component C6 [Sus scrofa].
          Length = 935

 Score = 1902 bits (4928), Expect = 0.0
 Identities = 898/935 (96%), Positives = 901/935 (96%)
 Frame = +2

Query: 293  MDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGXXXXXXXXXXNQYYLDNF 472
            MDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSG          NQYYLDNF
Sbjct: 1    MDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGTQTRQRQITINQYYLDNF 60

Query: 473  CDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEP 652
            CDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSIL PNQFGGQPCTEP
Sbjct: 61   CDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILRPNQFGGQPCTEP 120

Query: 653  LMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVC 832
            LMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVC
Sbjct: 121  LMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVC 180

Query: 833  SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVD 1012
            SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENV+
Sbjct: 181  SRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVN 240

Query: 1013 FEVQTKXXXXXXXXXXXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFK 1192
            FEVQTK           LIPLENSKDQQATGFGQEKSSFHVPIFY            AFK
Sbjct: 241  FEVQTKEDDFQTDFYEDLIPLENSKDQQATGFGQEKSSFHVPIFYSSKKSQTSSHNSAFK 300

Query: 1193 QAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDD 1372
            QAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDD
Sbjct: 301  QAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALYSRIFDD 360

Query: 1373 FGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRC 1552
            FGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRC
Sbjct: 361  FGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRC 420

Query: 1553 TTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSEWLESVKENP 1732
            TTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYS+WLESVKENP
Sbjct: 421  TTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKTYSDWLESVKENP 480

Query: 1733 AVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECL 1912
            AVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECL
Sbjct: 481  AVIDFELAPITDLVRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECL 540

Query: 1913 CVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKP 2092
            CVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKP
Sbjct: 541  CVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKP 600

Query: 2093 CDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNEKT 2272
            CDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNEKT
Sbjct: 601  CDGERRQEEHCTFSIMQNTGQPCIGDDEDMKEIDLPEIESDSGCPQPVPPENGFIRNEKT 660

Query: 2273 LYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQR 2452
            LYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQR
Sbjct: 661  LYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQR 720

Query: 2453 LYKIGDSIELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQDFLTRLKGHCQPGQKQL 2632
            LYKIGDSIELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQDFLTRLKGHCQPGQKQL
Sbjct: 721  LYKIGDSIELSCPKGFVIAGPSRYTCSGDSWTPPISSSLTCEQDFLTRLKGHCQPGQKQL 780

Query: 2633 GSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDG 2812
            GSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDG
Sbjct: 781  GSECVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDG 840

Query: 2813 PQLEWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQCLKGGYQHYCVKM 2992
            PQLEWGLERIKLSSSSTKNESCGYDTCYSWE+CSATTSKCICLLPFQCLKGGYQHYCVKM
Sbjct: 841  PQLEWGLERIKLSSSSTKNESCGYDTCYSWEKCSATTSKCICLLPFQCLKGGYQHYCVKM 900

Query: 2993 GSSTTTRTMNICEVGAIRCALRKMEILYPGRCRSN 3097
            GSSTTTRTMNICEVGAIRCALRKMEILYPGRCRSN
Sbjct: 901  GSSTTTRTMNICEVGAIRCALRKMEILYPGRCRSN 935


>ref|XP_003359813.1| PREDICTED: complement component C6-like [Sus scrofa].
          Length = 267

 Score =  511 bits (1315), Expect = e-144
 Identities = 232/244 (95%), Positives = 234/244 (95%)
 Frame = +2

Query: 290  MMDKHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGXXXXXXXXXXNQYYLDN 469
            MMD+HSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSG          NQYYLDN
Sbjct: 1    MMDRHSVLYFILLSGLIDKSQACFCDHYPWTQWSSCSKTCNSGTQTRQRQITINQYYLDN 60

Query: 470  FCDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTE 649
            FCDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTE
Sbjct: 61   FCDRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTE 120

Query: 650  PLMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAV 829
            PLMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAV
Sbjct: 121  PLMTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAV 180

Query: 830  CSRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENV 1009
            CSRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENV
Sbjct: 181  CSRKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENV 240

Query: 1010 DFEV 1021
            DFE+
Sbjct: 241  DFEI 244


>ref|NP_999447.1| complement component C7 precursor [Sus scrofa].
          Length = 843

 Score =  430 bits (1106), Expect = e-120
 Identities = 262/856 (30%), Positives = 407/856 (47%), Gaps = 15/856 (1%)
 Frame = +2

Query: 527  PINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEV 706
            P+NC    Y PWS+C+ C + Q + R +    Q+GG PC       + C P++ C  EE 
Sbjct: 25   PVNCQWDSYAPWSECNGCTKTQTRRRPVAVYGQYGGHPCVGSTFETQSCEPTRGCPTEE- 83

Query: 707  DCKNKFRCDSGRCIASKLECNGENDCG-DNSDERNC--GRTKAVCSRKYNPIPSVQLMGA 877
             C  +FRC SG+CI+  L CNG++DC  D++DE  C    ++  C     P P+++L G 
Sbjct: 84   GCGERFRCFSGQCISKSLVCNGDSDCEEDSADEDRCEDSESRPSCDLS-KPPPNIELTGN 142

Query: 878  GFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKXXXXXXXXX 1057
            G++ L G+ R  VL     GG C+ V S    + +R+  N+ +  F+V+           
Sbjct: 143  GYNALTGQFRNRVLNTKSFGGQCRKVFSGDGRDFYRLSGNVLSYTFQVKVNNDFNYEFYN 202

Query: 1058 XXLIPLENSKDQQATGFGQEKSSFHVPIFYXXXXXXXXXXXXAFKQAIQASHKKDSSFIR 1237
                  +++  +  +      S   V IF              + +  +   KK    + 
Sbjct: 203  STWSYAKHTSTEHTSS-----SKGRVFIFSSSSSSSSY-----YAKTYEILKKKSYQLLV 252

Query: 1238 IHKVIKVLNFTMKTKD-LQLSDVFLKALNHLPLEYNAALYSRIFDDFGTHYFTSGSLGGV 1414
            +   ++V  F     + LQL++ F K L++LP  Y+ + Y R+ D +GTHY  SGSLGG 
Sbjct: 253  VQNTVEVAQFINNNPEFLQLAESFWKELSYLPPLYDYSAYRRLIDQYGTHYLQSGSLGGE 312

Query: 1415 YDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVTKTKVEHRCTTNRMSEKYEGSFL 1594
            Y +L+   +E++  S L  E+ K C         F+   +K  H+C     + K      
Sbjct: 313  YKVLFYVDSEKVAESDLGSEDKKKCASSHIS---FLFKSSK--HKCKAMEEALKSASGTQ 367

Query: 1595 QGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKT-YSEWLESVKENPAVIDFELAPITDL 1771
                + +  V+GGR  + + L++ +  +  G K  YS W  SV + P VI  +L P+ +L
Sbjct: 368  SNVLRGVPFVRGGRPGFVSGLSYLELDNPDGNKQRYSSWAGSVTDLPQVIKQKLTPLYEL 427

Query: 1772 VRNIPCAVTRRNNLRRAFREYAAKFDPCQCAPCPNNGRPVLSGTECLCVCQSGTYGDNCE 1951
            V+ +PCA  +R  L+RA  EY  +FD C C PC N G   + GT+C C C+  T+G  CE
Sbjct: 428  VKEVPCASVKRLYLKRALEEYLDEFDSCHCQPCQNGGMASVEGTQCQCHCKPNTFGVACE 487

Query: 1952 RRA-PDYKSNAVDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEHCT 2128
            +       +  +DG W CWSSW  C A  K++R+R+CNNP P  GGK C GE  +   C 
Sbjct: 488  QGVLVGDHAGGIDGGWSCWSSWGPC-AQGKKTRSRKCNNPPPSGGGKSCIGETSESRQC- 545

Query: 2129 FSIMQNTGQPCIGDDEDMKEIDLPE-------IESDSGCPQPVPPENGFIRNEKTLYSVG 2287
                         +DED++ + L E       +     CP P   ++GF++NE+T + VG
Sbjct: 546  -------------EDEDLEHLRLLEPHCFPLSLVPTEFCPSPPALKDGFVQNEETTFPVG 592

Query: 2288 EDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTDCLLPVVPEVLKLSPFQRLYKIG 2467
            +++   C  G+  VG    RC  D  W  G + CQ+  C+LP +   L+  P +  Y +G
Sbjct: 593  KNIVYSCNEGYSLVGDPVARCGEDLQWTVGKMHCQKIACVLPTLMRGLQSHPQKPFYTVG 652

Query: 2468 DSIELSCPKGFVIAGPSRYTC-SGDSWTPPISSSLTCEQDF-LTRLKGHCQPGQKQLGSE 2641
            + +  SC  G  + GPS + C S   W+P + +     ++  L +    CQ  +K   S+
Sbjct: 653  EKVTFSCSSGMSLEGPSTFLCGSSLKWSPEMKNVQCVRKEAPLAKKVPECQLWEKLQNSK 712

Query: 2642 CVCLSPEEDCSHHSEDLCVLDTDSNHYFTSSACKFLAEKCLNNQQLQFLHIGSCQDGPQL 2821
            CVC  P E  S  S D+C  D  S      + CK              +H+  CQ     
Sbjct: 713  CVCKMPYECGS--SLDVCARDERSKRILRLTVCK--------------MHVLQCQGRNYT 756

Query: 2822 EWGLERIKLSSSSTKNESCGYDTCYSWEECSATTSKCICLLPFQCLKGGYQHYCVKMGSS 3001
                E   L  S+ K  +CG   C  WE+C A +SKC+C    +C + G++  CV++   
Sbjct: 757  LSVGETCTLPGSAEK--ACG--ACPLWEKCDAQSSKCVCRAASECEEAGFR-VCVEVNG- 810

Query: 3002 TTTRTMNICEVGAIRC 3049
               +TM  CE G +RC
Sbjct: 811  -REQTMTECEAGVLRC 825


>ref|NP_001090919.1| complement component C8 alpha chain [Sus scrofa].
          Length = 589

 Score =  301 bits (771), Expect = 2e-81
 Identities = 185/567 (32%), Positives = 276/567 (48%), Gaps = 35/567 (6%)
 Frame = +2

Query: 530  INCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSKLCKIEEVD 709
            ++C L ++  W++C PC +K+++ RS+L PN+FGG  C+  +     C     C + +  
Sbjct: 40   VSCQLSNWAEWTECFPCQDKKYRYRSLLQPNKFGGAICSGNVWDQASCHSPTEC-LRQAQ 98

Query: 710  CKNKFRC-DSGRCIASKLECNGENDCGDNSDERNCGRTKAV---CSRKYNPIPSVQLMGA 877
            C   F+C ++GRC+   L CNG+ DC D SDE +C   +     CS+ Y+PIP  +    
Sbjct: 99   CGQDFQCKETGRCLKRHLVCNGDRDCLDGSDEDDCEDVRIFEDDCSQ-YDPIPGSERATL 157

Query: 878  GFHILAGEPRGEVLGNSFTGGICKTVKSSK-----------------ASNPFRVPANLEN 1006
            G++IL  E    V    + GG C+TV + +                     FR P N   
Sbjct: 158  GYNILTQEETQSVYDARYYGGQCETVYNGEWRELRYDSACERLYYGDDEKYFRNPYNFLK 217

Query: 1007 VDFEV--QTKXXXXXXXXXXXLIP-LENSKDQQA---TGFGQEKSSFHVPIFYXXXXXXX 1168
              FE    +K           L+  ++N K   A    G G   S F   +         
Sbjct: 218  YHFEALADSKFSSESYDDANDLLKKVKNEKSVSAGVTVGIGPTGSPFTANV------GLS 271

Query: 1169 XXXXXAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAA 1348
                 AF   +   ++K  SFIRI   ++  +F M+  ++ L +V L++L  LP +YN  
Sbjct: 272  GSRESAFLNKLSTYNEKKYSFIRIFTKVQTASFMMRRDNIMLDEVMLQSLMELPEQYNYG 331

Query: 1349 LYSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCIRIETKKRYFIVT 1528
            +Y++  DD+GTHY TSGS+GGVY+ +   + E +  SG+T ++  +C        Y    
Sbjct: 332  MYAKFIDDYGTHYITSGSMGGVYEYILVLNKENMTKSGVTSDDVTSCFGGSFGIDYDYTD 391

Query: 1529 KTKVEHRCTTNRMSEKYEGSFLQGSEKS------ISLVKGGRSEYAAALAWEKGSSGPGE 1690
              ++     + +  +K  G   +  E +      IS V+GG S +   L  + GS     
Sbjct: 392  NLQIT-GSLSGKHCKKLGGGHREDEESNMAVEDIISRVRGGSSGWGGGLT-QNGSI---- 445

Query: 1691 KTYSEWLESVKENPAVIDFELAPITDLVR--NIPCAVTRRNNLRRAFREYAAKFDPCQCA 1864
             TY  W  S+K NPAVIDFE+ PI +++R  N+     +R NLRRA  +Y  +F+ C+C 
Sbjct: 446  ITYRAWGRSLKYNPAVIDFEMKPIYEILRHTNLGPLEAKRQNLRRALDQYLMEFNACRCG 505

Query: 1865 PCPNNGRPVLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATYKRS 2044
            PC NNG P+L GT C C C  G  G  CE+   +      DG W CWSSWS C     + 
Sbjct: 506  PCFNNGEPILVGTSCRCQCPVGCQGLACEQMKSE--GAKADGRWSCWSSWSAC-RLGTQE 562

Query: 2045 RTRECNNPAPRQGGKPCDGERRQEEHC 2125
            R RECNNPAP+ GG  C G + Q + C
Sbjct: 563  RRRECNNPAPQNGGASCSGHKVQTQAC 589


>ref|NP_001090920.1| complement component C8B [Sus scrofa].
          Length = 611

 Score =  252 bits (643), Expect = 1e-66
 Identities = 156/528 (29%), Positives = 251/528 (47%), Gaps = 15/528 (2%)
 Frame = +2

Query: 476  DRLCTKQETRECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPL 655
            + L   ++TR  +    PI+C L  +  W+ CDPC +K+++  S+L P+QF G+PC    
Sbjct: 57   ESLGKSRQTRSVDVTLTPIDCELSSWSSWTTCDPCQKKRYRHASLLRPSQFHGEPCNFSD 116

Query: 656  MTFRPCIPSKLCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNCGRTKAVCS 835
                 C+ ++ C+  +V C+      +GRCI  +L CNG+NDCGD SDE NC R    C 
Sbjct: 117  KEVEDCVSNRPCR-SQVRCEGFVCAQTGRCINRRLLCNGDNDCGDQSDEANCKRIYKKCQ 175

Query: 836  RKYNPIPSVQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDF 1015
            ++ +   ++  + +G ++      G VL + +  G C        +  FR P N+EN + 
Sbjct: 176  QEMDQYWAIGSLASGINLFTNNLEGPVLDHRYYAGACS--PHYILNTRFRKPYNVENFNP 233

Query: 1016 EVQTKXXXXXXXXXXXLIPLENSKD--QQATGFGQEKSSFHV-----PIFYXXXXXXXXX 1174
            + Q K           L   E+  D  Q  T     KSSF        +F          
Sbjct: 234  QTQGK-------YDFALTEYESYSDFEQNVTTAAISKSSFSFGFKISGMFEFGISSTSDK 286

Query: 1175 XXXAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPLEYNAALY 1354
                  +  + SH K S+F+     ++V  + +K+++L L   FL+ +  LPLEY+   Y
Sbjct: 287  GKRFISRTKRFSHTK-STFLHARSDLEVARYKLKSRNLMLHYEFLQRVKQLPLEYSYGEY 345

Query: 1355 SRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNC----IRIETKKRYFI 1522
              +F DFGTHY T   LGGVY+     + E ++ +  + ++   C     +I        
Sbjct: 346  RDLFRDFGTHYITEAVLGGVYEYTLIMNKEAMERADYSLKDVHACAQHGFKIGVAIEEVY 405

Query: 1523 VTKTKVEHRC--TTNRMSEKYEGSFLQGSEKSISLVKGGRSEYAAALAWEKGSSGPGEKT 1696
            V      H+C    N + ++ + S +      + LV+GG SE+  ALA++     P    
Sbjct: 406  VKLGVPVHKCKDILNEIKDRNKRSSMVND--LVVLVRGGASEHITALAYK---DLPTADL 460

Query: 1697 YSEWLESVKENPAVIDFELAPITDLV--RNIPCAVTRRNNLRRAFREYAAKFDPCQCAPC 1870
              EW ++V+ NP +I  +  P+ +LV   +   + T + N++RA  E+  +   C CAPC
Sbjct: 461  MQEWGDAVQYNPDIIKIKAEPLYELVTAADFAYSSTVKQNMKRALEEFEKEISSCHCAPC 520

Query: 1871 PNNGRPVLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSW 2014
              NG PVL  + C C+C +G  G  CE    + K+  +DG W CWS W
Sbjct: 521  QGNGVPVLKESRCDCICPAGFQGSACE--VTNRKNVPIDGKWNCWSDW 566


>ref|NP_001090917.1| complement component C9 [Sus scrofa].
          Length = 543

 Score =  207 bits (527), Expect = 3e-53
 Identities = 130/478 (27%), Positives = 219/478 (45%), Gaps = 30/478 (6%)
 Frame = +2

Query: 506  ECNWQTCPINCLLGDYGPWSDCDPCVEKQFKVRSILHPNQFGGQPCTEPLMTFRPCIPSK 685
            +CN    PI+C +  +G WS CDPC+++ F+ RSI    QF GQ C + +   R C+P++
Sbjct: 33   DCNGTPSPIDCRMSPWGEWSRCDPCLKQMFRSRSIETFGQFNGQKCVDAVGDRRQCVPTE 92

Query: 686  LCKIEEVDCKNKFRCDSGRCIASKLECNGENDCGDNSDERNC-GRTKAVC-SRKYNPIPS 859
             C+  E DC + F+C +GRCI  +L CNG+NDCGD SDE +C    +  C  R       
Sbjct: 93   PCEDLEEDCGSDFQCGTGRCIKRRLLCNGDNDCGDFSDEDDCDSDPRPPCRERVVEESEL 152

Query: 860  VQLMGAGFHILAGEPRGEVLGNSFTGGICKTVKSSKASNPFRVPANLENVDFEVQTKXXX 1039
             +  G G +IL  +P      N +  G+C  V+       +R P N+  + +E +     
Sbjct: 153  ARTAGYGINILGMDPLTTPFDNEYYNGLCDRVRDGNTLTYYRKPWNVAALIYETKVDKNF 212

Query: 1040 XXXXXXXXLIPLENSKDQQATGFG-------------QEKSSFHV---------PIFYXX 1153
                    +  L+   +++ + F              ++  S +V         P+    
Sbjct: 213  RTEYHERQIQVLKTIIEEKKSNFNADLTIKFTPTEAIEQLKSKNVELANEENSNPMNNKA 272

Query: 1154 XXXXXXXXXXAFKQAIQASHKKDSSFIRIHKVIKVLNFTMKTKDLQLSDVFLKALNHLPL 1333
                       +K  +  S KK+  F+ +  VI +  F M+ +D+ L+  FL  + +LP 
Sbjct: 273  HFRFTYSKTETYKLLLSYSSKKEKIFLHVKGVIHLGRFVMRKRDVMLTKTFLDDVKYLPS 332

Query: 1334 EYNAALYSRIFDDFGTHYFTSGSLGGVYDLLYQFSNEELKNSGLTQEEAKNCI--RIETK 1507
             Y    Y    + +GTHY +SGSLGG+Y+L+Y      +   G+   +   C+   ++  
Sbjct: 333  TYEKGEYFAFLETYGTHYSSSGSLGGLYELIYVLDKATMTEKGIELRDVHRCLGFNLDLS 392

Query: 1508 KRYFIVTKTKVEHRCTTNRMSEKYEGSFLQG-SEKSISLVKGGRSEYAAALAWE--KGSS 1678
              + +  K K++      R   K E        +  IS ++GG  +YA  L  +  KG+ 
Sbjct: 393  LNFGVEIKGKIDSENCLKRGDGKTENIMNDDFIDDVISFIRGGTRKYATELKEKLLKGAK 452

Query: 1679 GPGEKTYSEWLESVKENPAVIDFELAPITDLVR-NIPCAVTRRNNLRRAFREYAAKFD 1849
                  +  W  S+ + P +I+ +L+PI DL+   +  A  +R NL RA  +Y  +F+
Sbjct: 453  MINVTDFVNWASSLNDAPVLINQKLSPIYDLIPVKLNDAHLKRQNLERAIEDYINEFN 510


>ref|XP_003133422.1| PREDICTED: LOW QUALITY PROTEIN: netrin receptor UNC5D-like [Sus
            scrofa].
          Length = 962

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 32/79 (40%), Positives = 42/79 (53%)
 Frame = +2

Query: 1982 VDGNWGCWSSWSTCDATYKRSRTRECNNPAPRQGGKPCDGERRQEEHCTFSIMQNTGQPC 2161
            VDG+W  WS WS C    +  R REC  P PR GGK C+G  ++ E+CT  +       C
Sbjct: 316  VDGSWEVWSEWSVCSPECEHLRIRECTAPPPRNGGKFCEGLSQESENCTDGL-------C 368

Query: 2162 IGDDEDMKEIDLPEIESDS 2218
            I D + + EI    IE+ S
Sbjct: 369  ILDKKPLHEIKPQSIENAS 387



 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +2

Query: 1982 VDGNWGCWSSWSTCDATYKRS---RTRECNNPAPRQGGKPCDGERRQEEHCT 2128
            V+G W  W+ WS C+    R    R+R C NPAP  GG  C+G   Q+  CT
Sbjct: 260  VNGGWSSWTEWSACNVRCGRGWQKRSRTCTNPAPLNGGAFCEGMSVQKITCT 311


>ref|XP_003122123.1| PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin
            domain-containing protein 1 [Sus scrofa].
          Length = 3257

 Score = 63.5 bits (153), Expect = 7e-10
 Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 11/193 (5%)
 Frame = +2

Query: 2222 CPQP-VPPENGFIRNEKTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRT 2398
            CP P V PEN  + +EK  Y V ++V I C  GF   G     C PD TW +   +C++ 
Sbjct: 3043 CPVPFVIPENALL-SEKEFY-VDQNVSIKCREGFLLQGQSIITCRPDETWTQTSAKCEKI 3100

Query: 2399 DCLLPVVPEVLKLSPFQRLYKIGDSIELSCPKGFVIAGPSRYTC-SGDSWT-PPISSSL- 2569
             C  P   E          Y+ GD I  SC  G+++ G  R  C    +WT PP+  ++ 
Sbjct: 3101 SCGPPTHVENAIARGVH--YQYGDMITYSCYSGYMLEGSLRSVCLENGTWTSPPVCRAVC 3158

Query: 2570 --TCEQDFLTRLKGHCQPGQKQLGSEC---VCLSPEEDCSHHSEDLCVLDTDSNHYFTSS 2734
               C+   + +    C      +G  C   +C+ P   C +    +     D    +T S
Sbjct: 3159 RFPCQNGGICQRPNACFCPDGWMGRLCEEPICILP---CLNGGRCVAPYQCDCPLGWTGS 3215

Query: 2735 AC--KFLAEKCLN 2767
             C        CLN
Sbjct: 3216 RCHTAVCQSPCLN 3228



 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2222 CPQPVPPENGFIRNEKTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTD 2401
            C  P  PENG    +  +Y+VG +V   C  G + +G     CL    W      C+   
Sbjct: 1475 CKAPGNPENGHSSGQ--IYTVGAEVTFSCEDGHQLMGVAKITCLESGEWSHEIPNCEAIS 1532

Query: 2402 CLLPVVPEVLKLSPFQRLYKIGDSIELSCPKGFVIAGPSRYTC-SGDSW--TPPISSSLT 2572
            C  P VPE   +      Y  G  +   C KG+ + G    +C +  SW  +PP+   + 
Sbjct: 1533 CGAPAVPENGGIDGSAFTY--GSKVTYRCNKGYTLEGEKESSCLASGSWSHSPPVCELVK 1590

Query: 2573 C 2575
            C
Sbjct: 1591 C 1591



 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2210 SDSGCPQPVPPENGFIRNEKTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVEC 2389
            S   C +P  PE+GF+   +  YS    +   C TG++  G +   C  +  W  G   C
Sbjct: 2923 SPVSCGKPESPEHGFVFGSE--YSFESTIVYHCETGYELEGSRERVCQENGQWSGGVATC 2980

Query: 2390 QRTDCLLPVVPEVLKLSPFQRLYKIGDSIELSCPKGFVIAGPSRYTCS-GDSWTPPI 2557
            ++T C  P  PE+L           G S+  SC +G+ + G    +C+  ++W+ P+
Sbjct: 2981 KKTRCEAP--PELLNGKAEVENSTAGLSVVYSCNRGYSLEGVPEASCTENETWSHPV 3035


>ref|NP_999446.1| complement factor H [Sus scrofa].
          Length = 1234

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 8/154 (5%)
 Frame = +2

Query: 2222 CPQPVPPENGFIRNEKTLYSVGEDVEIVCLTGFKTVGYQYFRCLPDRTWRRGDVECQRTD 2401
            C  P   +NG +  EK  Y  GE+V   C  GF   G    RCL ++ W     EC  TD
Sbjct: 937  CAPPPEIQNGAVAQEKDSYLYGEEVTYSCDEGFGIDGPASIRCLGEK-WSH-PPECINTD 994

Query: 2402 CL-LPVVPEVLKLSPFQRLYKIGDSIELSCPKGFVIAGPSRYTCSGDSWT-PPISSSLTC 2575
            C  LP   + + + P +  YK G+ +   C + F + GP+   C    W   P    ++C
Sbjct: 995  CFDLPTFNDAVVIGPKKPSYKSGEQVTFKCLQYFQLEGPNTIRCIKSRWIGKPACRDVSC 1054

Query: 2576 ------EQDFLTRLKGHCQPGQKQLGSECVCLSP 2659
                  E   +   +   QPG++   +   C+ P
Sbjct: 1055 VNPPSVENAVILDKRSRYQPGER---ARYECIEP 1085


>ref|XP_003130436.2| PREDICTED: hemicentin-1-like [Sus scrofa].
          Length = 652

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 36/117 (30%), Positives = 46/117 (39%), Gaps = 24/117 (20%)
 Frame = +2

Query: 1847 DPCQCAPCPNNGR--PVLSGTECLCVCQSGTYGD--NCERRAPDYKSNA----------- 1981
            D C    CP +G   P      C   C  G       C+   P     A           
Sbjct: 176  DFCNSDSCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPRPSNGGRACGGPDSQIQRC 235

Query: 1982 ------VDGNWGCWSSWSTCDATY---KRSRTRECNNPAPRQGGKPCDGERRQEEHC 2125
                  VDG+WG W SWS C A+    +++R R CNNP P + G+PC G+  Q   C
Sbjct: 236  NTDLCPVDGSWGSWQSWSWCSASCGGGEKTRKRLCNNPVPSKSGRPCPGDATQVSRC 292



 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = +2

Query: 1874 NNGRPVLSGTECLCVCQSGTYGDNCERRAPDYKSNAVDGNWGCWSSWSTCDATY---KRS 2044
            NN  P   G+ C         G   + +  + +   +DG W  WSSWS C  +     R 
Sbjct: 100  NNPPPSFDGSYC--------DGTETQMQVCNERHCPIDGKWTTWSSWSACTVSCGGGARQ 151

Query: 2045 RTRECNNPAPRQGGKPCDGERRQEEHC 2125
            RTR+C++PAP+ GG  C+G   Q + C
Sbjct: 152  RTRDCSDPAPQYGGNKCEGSDVQSDFC 178



 Score = 53.5 bits (127), Expect = 8e-07
 Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +2

Query: 1958 APDYKSNAVDGNWGCWSSWSTCDATYKR---SRTRECNNPAPRQGGKPCDGERRQEEHC 2125
            A D  S+ V G W  W  W TC A+  +   +RTR CNNP P   G  CDG   Q + C
Sbjct: 63   ACDVSSDTVHGAWSTWQPWGTCSASCGKGTQTRTRLCNNPPPSFDGSYCDGTETQMQVC 121


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 83,755,596
Number of extensions: 2251095
Number of successful extensions: 7814
Number of sequences better than 1.0e-05: 41
Number of HSP's gapped: 7572
Number of HSP's successfully gapped: 54
Length of query: 1141
Length of database: 11,343,932
Length adjustment: 110
Effective length of query: 1031
Effective length of database: 8,605,262
Effective search space: 8872025122
Effective search space used: 8872025122
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= LVRM1_0081_E01
         (3424 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr16                                                         981   0.0  

>Sscrofa_Chr16 
||          Length = 86898991

 Score =  981 bits (495), Expect = 0.0
 Identities = 495/495 (100%)
 Strand = Plus / Plus

                                                                            
Query: 2913     cagccaccacctccaagtgcatctgcctactgcccttccagtgtttgaagggtggatacc 2972
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27170554 cagccaccacctccaagtgcatctgcctactgcccttccagtgtttgaagggtggatacc 27170613

                                                                            
Query: 2973     aacactactgcgtcaaaatgggatcatcaacgaccacaagaaccatgaacatctgtgaag 3032
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27170614 aacactactgcgtcaaaatgggatcatcaacgaccacaagaaccatgaacatctgtgaag 27170673

                                                                            
Query: 3033     taggagccataagatgtgccctcaggaaaatggaaatactttatcctgggagatgtaggt 3092
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27170674 taggagccataagatgtgccctcaggaaaatggaaatactttatcctgggagatgtaggt 27170733

                                                                            
Query: 3093     ctaactgaaatcttgataaacagatttactgtccaaaaataatccctacagagatgctct 3152
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27170734 ctaactgaaatcttgataaacagatttactgtccaaaaataatccctacagagatgctct 27170793

                                                                            
Query: 3153     tgtataaacagcagactgccacatccaggagttactaacataaattcttttgtgttagtt 3212
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27170794 tgtataaacagcagactgccacatccaggagttactaacataaattcttttgtgttagtt 27170853

                                                                            
Query: 3213     tcatgtaattattctccctgcctcttgtgtcttctcctctatccaattctagtccacacc 3272
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27170854 tcatgtaattattctccctgcctcttgtgtcttctcctctatccaattctagtccacacc 27170913

                                                                            
Query: 3273     cctaggtaataactttcacatcagtctagtaaattattctgttcatgtggcactaaaatg 3332
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27170914 cctaggtaataactttcacatcagtctagtaaattattctgttcatgtggcactaaaatg 27170973

                                                                            
Query: 3333     atggcacttctaatgaccttatgaagtacaaaaaccttaattttcttcaatgaatcaata 3392
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27170974 atggcacttctaatgaccttatgaagtacaaaaaccttaattttcttcaatgaatcaata 27171033

                               
Query: 3393     aacatagaagtctcg 3407
                |||||||||||||||
Sbjct: 27171034 aacatagaagtctcg 27171048



 Score =  490 bits (247), Expect = e-135
 Identities = 247/247 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1218     aggattccagttttattaggatccataaagtgataaaagtcttaaacttcacaatgaaaa 1277
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27232824 aggattccagttttattaggatccataaagtgataaaagtcttaaacttcacaatgaaaa 27232765

                                                                            
Query: 1278     ctaaagatttgcagctttctgacgtctttttgaaagcacttaaccatctgcctctagaat 1337
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27232764 ctaaagatttgcagctttctgacgtctttttgaaagcacttaaccatctgcctctagaat 27232705

                                                                            
Query: 1338     acaacgctgctttgtacagccggatatttgatgattttgggactcactatttcacctctg 1397
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27232704 acaacgctgctttgtacagccggatatttgatgattttgggactcactatttcacctctg 27232645

                                                                            
Query: 1398     gctccctgggaggcgtgtacgaccttctctatcagtttagcaatgaggaactgaagaact 1457
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27232644 gctccctgggaggcgtgtacgaccttctctatcagtttagcaatgaggaactgaagaact 27232585

                       
Query: 1458     caggttt 1464
                |||||||
Sbjct: 27232584 caggttt 27232578



 Score =  478 bits (241), Expect = e-131
 Identities = 244/245 (99%)
 Strand = Plus / Plus

                                                                            
Query: 2671     cagccatcattcagaagatctctgtgtgcttgatacagactccaatcattactttacttc 2730
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27164671 cagccatcattcagaagatctctgtgtgcttgatacagactccaatcattactttacttc 27164730

                                                                            
Query: 2731     atccgcttgtaagtttttggccgagaaatgtttaaataatcagcaactccaatttctaca 2790
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27164731 atccgcttgtaagtttttggccgagaaatgtttaaataatcagcaactccaatttctaca 27164790

                                                                            
Query: 2791     tattggttcgtgccaagatggtccacagttggaatggggtcttgaaaggataaaactttc 2850
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27164791 tattggttcgtgccaagatggtccacagttggaatggggtcttgaaaggataaaactttc 27164850

                                                                            
Query: 2851     atccagtagcacaaagaatgaatcctgtggctatgatacctgctacagctgggaagaatg 2910
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 27164851 atccagtagcacaaagaatgaatcctgtggctatgatacctgctacagctgggaaaaatg 27164910

                     
Query: 2911     ttcag 2915
                |||||
Sbjct: 27164911 ttcag 27164915



 Score =  452 bits (228), Expect = e-124
 Identities = 228/228 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1749     agcttgctcccatcacagatttggtaagaaacatcccctgtgcggtgacaagacggaaca 1808
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27219372 agcttgctcccatcacagatttggtaagaaacatcccctgtgcggtgacaagacggaaca 27219313

                                                                            
Query: 1809     acctcaggagagctttccgagaatacgcagccaaatttgacccttgccagtgtgctccgt 1868
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27219312 acctcaggagagctttccgagaatacgcagccaaatttgacccttgccagtgtgctccgt 27219253

                                                                            
Query: 1869     gccccaacaacggccgccctgtgctctcagggaccgaatgtctatgtgtgtgccagagcg 1928
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27219252 gccccaacaacggccgccctgtgctctcagggaccgaatgtctatgtgtgtgccagagcg 27219193

                                                                
Query: 1929     gcacctacggtgacaactgtgagaggcgtgccccggattacaaatcta 1976
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27219192 gcacctacggtgacaactgtgagaggcgtgccccggattacaaatcta 27219145



 Score =  396 bits (200), Expect = e-107
 Identities = 203/204 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1017     aggtacaaactaaagaagatgattttgaaacagatttctttgaggatttaattcctcttg 1076
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 27236983 aggtacaaactaaagaagatgattttgaaacagatttctatgaggatttaattcctcttg 27236924

                                                                            
Query: 1077     aaaatagtaaagatcaacaagccacaggtttcggccaagagaagagctcttttcatgtac 1136
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27236923 aaaatagtaaagatcaacaagccacaggtttcggccaagagaagagctcttttcatgtac 27236864

                                                                            
Query: 1137     caattttttattcctcaaagaaaagccaaaccagcagccataattctgccttcaaacaag 1196
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27236863 caattttttattcctcaaagaaaagccaaaccagcagccataattctgccttcaaacaag 27236804

                                        
Query: 1197     ctattcaagcctcccacaaaaagg 1220
                ||||||||||||||||||||||||
Sbjct: 27236803 ctattcaagcctcccacaaaaagg 27236780



 Score =  367 bits (185), Expect = 3e-98
 Identities = 188/189 (99%)
 Strand = Plus / Minus

                                                                            
Query: 2394     ggactgactgcctcttgccagtggtgccagaagtactgaaactgtcaccatttcagagat 2453
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27211533 ggactgactgcctcttgccagtggtgccagaagtactgaaactgtcaccatttcagagat 27211474

                                                                            
Query: 2454     tgtataaaattggtgactccattgagctaagctgtcccaaaggctttgtcattgctgggc 2513
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27211473 tgtataaaattggtgactccattgagctaagctgtcccaaaggctttgtcattgctgggc 27211414

                                                                            
Query: 2514     catcgaggtacacatgcagtggggattcctggacaccacctatctcaagctcactcacct 2573
                |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 27211413 catcgaggtacacatgcagtggggattcctggacaccacccatctcaagctcactcacct 27211354

                         
Query: 2574     gtgaacaag 2582
                |||||||||
Sbjct: 27211353 gtgaacaag 27211345



 Score =  335 bits (169), Expect = 1e-88
 Identities = 169/169 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1582     aggttcctttttgcaaggatcagagaaatccatatccctggttaaaggtggaagaagtga 1641
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27222256 aggttcctttttgcaaggatcagagaaatccatatccctggttaaaggtggaagaagtga 27222197

                                                                            
Query: 1642     gtatgcagcggctttggcatgggagaaagggagttctggcccaggagagaagacatattc 1701
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27222196 gtatgcagcggctttggcatgggagaaagggagttctggcccaggagagaagacatattc 27222137

                                                                 
Query: 1702     tgagtggttggaatcagtgaaggaaaatcctgctgtgattgactttgag 1750
                |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27222136 tgagtggttggaatcagtgaaggaaaatcctgctgtgattgactttgag 27222088



 Score =  333 bits (168), Expect = 4e-88
 Identities = 171/172 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1977     atgccgtagatgggaactggggctgctggtcttcctggagcacatgtgacgctacgtaca 2036
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27218234 atgccgtagatgggaactggggctgctggtcttcctggagcacatgtgacgctacgtaca 27218175

                                                                            
Query: 2037     agagatcaaggacccgagaatgcaacaaccctgccccccggcaaggagggaaaccctgcg 2096
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27218174 agagatcaaggacccgagaatgcaacaaccctgccccccggcaaggagggaaaccctgcg 27218115

                                                                    
Query: 2097     acggggagaggcggcaggaggaacactgcacattctccataatgcagaacac 2148
                | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27218114 agggggagaggcggcaggaggaacactgcacattctccataatgcagaacac 27218063



 Score =  327 bits (165), Expect = 2e-86
 Identities = 168/169 (99%)
 Strand = Plus / Minus

                                                                            
Query: 267      caggatctggagactctccaggcatgatggacaaacactctgtcttgtattttatcttgc 326
                ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 27256070 caggatctggagactctccaggcatgatggacagacactctgtcttgtattttatcttgc 27256011

                                                                            
Query: 327      tgagtggtctgattgacaagagccaagcctgtttctgtgatcactacccatggactcagt 386
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27256010 tgagtggtctgattgacaagagccaagcctgtttctgtgatcactacccatggactcagt 27255951

                                                                 
Query: 387      ggtccagctgctcaaaaacctgtaattctggaacccagaccagacagag 435
                |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27255950 ggtccagctgctcaaaaacctgtaattctggaacccagaccagacagag 27255902



 Score =  325 bits (164), Expect = 9e-86
 Identities = 164/164 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        gatcgctgggacatgaccttgggttagctagcagtggggaaaaaagacttgtttggatta 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27262334 gatcgctgggacatgaccttgggttagctagcagtggggaaaaaagacttgtttggatta 27262275

                                                                            
Query: 61       tcctataagccctcttcattgtgaataactattattttcttagccatttgcagattagtt 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27262274 tcctataagccctcttcattgtgaataactattattttcttagccatttgcagattagtt 27262215

                                                            
Query: 121      ccctggataccacaaactggataccagaaattctctttaaaggt 164
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27262214 ccctggataccacaaactggataccagaaattctctttaaaggt 27262171



 Score =  325 bits (164), Expect = 9e-86
 Identities = 164/164 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        gatcgctgggacatgaccttgggttagctagcagtggggaaaaaagacttgtttggatta 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52139118 gatcgctgggacatgaccttgggttagctagcagtggggaaaaaagacttgtttggatta 52139059

                                                                            
Query: 61       tcctataagccctcttcattgtgaataactattattttcttagccatttgcagattagtt 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52139058 tcctataagccctcttcattgtgaataactattattttcttagccatttgcagattagtt 52138999

                                                            
Query: 121      ccctggataccacaaactggataccagaaattctctttaaaggt 164
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52138998 ccctggataccacaaactggataccagaaattctctttaaaggt 52138955



 Score =  315 bits (159), Expect = 9e-83
 Identities = 159/159 (100%)
 Strand = Plus / Minus

                                                                            
Query: 434      agacaaattactataaatcagtactatcttgacaacttttgtgaccggctttgcaccaag 493
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27254358 agacaaattactataaatcagtactatcttgacaacttttgtgaccggctttgcaccaag 27254299

                                                                            
Query: 494      caggagaccagagaatgtaactggcaaacttgtcctatcaattgcctcctgggagattat 553
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27254298 caggagaccagagaatgtaactggcaaacttgtcctatcaattgcctcctgggagattat 27254239

                                                       
Query: 554      ggaccatggtcagattgtgacccttgtgttgaaaaacag 592
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 27254238 ggaccatggtcagattgtgacccttgtgttgaaaaacag 27254200



 Score =  297 bits (150), Expect = 2e-77
 Identities = 150/150 (100%)
 Strand = Plus / Minus

                                                                            
Query: 590      cagtttaaggttaggtccatcttgcaccccaatcagtttggaggacaaccatgtactgag 649
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27252967 cagtttaaggttaggtccatcttgcaccccaatcagtttggaggacaaccatgtactgag 27252908

                                                                            
Query: 650      ccactcatgacctttcgaccatgtattccatctaaactctgcaaaattgaagaggttgac 709
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27252907 ccactcatgacctttcgaccatgtattccatctaaactctgcaaaattgaagaggttgac 27252848

                                              
Query: 710      tgcaagaataaattccgctgtgacagtggt 739
                ||||||||||||||||||||||||||||||
Sbjct: 27252847 tgcaagaataaattccgctgtgacagtggt 27252818



 Score =  285 bits (144), Expect = 8e-74
 Identities = 144/144 (100%)
 Strand = Plus / Minus

                                                                            
Query: 879      ggtttcatattctggcaggagagcccagaggagaagtcctaggtaattctttcactggag 938
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27243065 ggtttcatattctggcaggagagcccagaggagaagtcctaggtaattctttcactggag 27243006

                                                                            
Query: 939      gaatatgtaaaaccgtcaaaagcagtaaagccagtaatccatttcgtgttccagccaatc 998
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27243005 gaatatgtaaaaccgtcaaaagcagtaaagccagtaatccatttcgtgttccagccaatc 27242946

                                        
Query: 999      tagaaaacgtcgactttgaggtac 1022
                ||||||||||||||||||||||||
Sbjct: 27242945 tagaaaacgtcgactttgaggtac 27242922



 Score =  280 bits (141), Expect = 5e-72
 Identities = 144/145 (99%)
 Strand = Plus / Minus

                                                                            
Query: 737      ggtcgctgcattgccagcaagttggaatgcaatggagaaaatgattgtggagacaattcg 796
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 27248597 ggtcgctgcattgccagcaagttggaatgcaatggagaaaatgattgtggagacaattca 27248538

                                                                            
Query: 797      gatgagaggaattgtgggagaacaaaagcagtatgctcacggaagtataatcccatccct 856
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27248537 gatgagaggaattgtgggagaacaaaagcagtatgctcacggaagtataatcccatccct 27248478

                                         
Query: 857      agtgtacagttgatgggcgctgggt 881
                |||||||||||||||||||||||||
Sbjct: 27248477 agtgtacagttgatgggcgctgggt 27248453



 Score =  268 bits (135), Expect = 2e-68
 Identities = 135/135 (100%)
 Strand = Plus / Minus

                                                                            
Query: 2260     gaatgaaaagacactgtattcagttggggaagatgttgaaattgtatgccttactggatt 2319
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27212548 gaatgaaaagacactgtattcagttggggaagatgttgaaattgtatgccttactggatt 27212489

                                                                            
Query: 2320     caaaactgttggctaccagtacttcagatgcttacctgacagaacctggaggcgaggaga 2379
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27212488 caaaactgttggctaccagtacttcagatgcttacctgacagaacctggaggcgaggaga 27212429

                               
Query: 2380     tgtggaatgccagcg 2394
                |||||||||||||||
Sbjct: 27212428 tgtggaatgccagcg 27212414



 Score =  244 bits (123), Expect = 3e-61
 Identities = 126/127 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1459     aggtttaacacaggaagaagccaaaaactgtatccggattgaaacaaagaaacgttattt 1518
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27227611 aggtttaacacaggaagaagccaaaaactgtatccggattgaaacaaagaaacgttattt 27227552

                                                                            
Query: 1519     tatagttacaaaaacaaaggtggaacaccggtgcaccacaaacaggatgtccgagaaata 1578
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 27227551 tatagttacaaaaacaaaggtggaacaccggtgcaccactaacaggatgtccgagaaata 27227492

                       
Query: 1579     cgaaggt 1585
                |||||||
Sbjct: 27227491 cgaaggt 27227485



 Score =  222 bits (112), Expect = 1e-54
 Identities = 112/112 (100%)
 Strand = Plus / Minus

                                                                            
Query: 2149     tggacagccatgcatcggtgatgatgaggacatgaaagaaatagaccttcctgaaataga 2208
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27217730 tggacagccatgcatcggtgatgatgaggacatgaaagaaatagaccttcctgaaataga 27217671

                                                                    
Query: 2209     atcagattcagggtgtcctcaaccagtccctccagaaaatggatttattcgg 2260
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27217670 atcagattcagggtgtcctcaaccagtccctccagaaaatggatttattcgg 27217619



 Score =  210 bits (106), Expect = 4e-51
 Identities = 109/110 (99%)
 Strand = Plus / Minus

                                                                            
Query: 161      aggtacagaaggaaaaaataagaaataaaagattcaaaatatttacaagaagatggaaag 220
                |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 27261829 aggtacagaaggaaaaaataagaaataagagattcaaaatatttacaagaagatggaaag 27261770

                                                                  
Query: 221      gaggatcctacagttgggaacaaactagagaatcttctgaacctgccagg 270
                ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27261769 gaggatcctacagttgggaacaaactagagaatcttctgaacctgccagg 27261720



 Score =  210 bits (106), Expect = 4e-51
 Identities = 109/110 (99%)
 Strand = Plus / Minus

                                                                            
Query: 161      aggtacagaaggaaaaaataagaaataaaagattcaaaatatttacaagaagatggaaag 220
                |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 52138613 aggtacagaaggaaaaaataagaaataagagattcaaaatatttacaagaagatggaaag 52138554

                                                                  
Query: 221      gaggatcctacagttgggaacaaactagagaatcttctgaacctgccagg 270
                ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52138553 gaggatcctacagttgggaacaaactagagaatcttctgaacctgccagg 52138504



 Score =  184 bits (93), Expect = 2e-43
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                            
Query: 2581     agattttctgacacgcttaaagggccattgtcaaccaggacaaaaacagttgggatctga 2640
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27161780 agattttctgacacgcttaaagggccattgtcaaccaggacaaaaacagttgggatctga 27161839

                                                 
Query: 2641     atgtgtttgcctgtctccagaagaagactgcag 2673
                |||||||||||||||||||||||||||||||||
Sbjct: 27161840 atgtgtttgcctgtctccagaagaagactgcag 27161872


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 116,802,643
Number of extensions: 249
Number of successful extensions: 249
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 249
Number of HSP's successfully gapped: 21
Length of query: 3424
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 3402
Effective length of database: 2,808,408,574
Effective search space: 9554205968748
Effective search space used: 9554205968748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 19 (38.2 bits)
S2: 30 (60.0 bits)