Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0147_F05
(3235 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069317.1| insulin-degrading enzyme [Bos taurus]. 1998 0.0
Alignment gi|NP_001193920.1| nardilysin [Bos taurus]. 514 e-145
Alignment gi|XP_001789518.1| PREDICTED: mitochondrial-processing peptidas... 52 3e-06
Alignment gi|NP_001029785.1| mitochondrial-processing peptidase subunit b... 52 3e-06
>ref|NP_001069317.1| insulin-degrading enzyme [Bos taurus].
Length = 1019
Score = 1998 bits (5175), Expect = 0.0
Identities = 986/1015 (97%), Positives = 991/1015 (97%)
Frame = +2
Query: 56 LAWLLHPALPSTFRSVLGARLPPLERLCGFQKKTYSKMNNSAIKRLGNHIIKSPEDKREY 235
LAWLLH ALPSTFRSVLGARLPP ERLCGFQKKTYSKMNN AIKR+G+HIIKS EDKREY
Sbjct: 5 LAWLLHSALPSTFRSVLGARLPPSERLCGFQKKTYSKMNNPAIKRIGHHIIKSHEDKREY 64
Query: 236 RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE 415
RGLELANGIKVLL+SDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE
Sbjct: 65 RGLELANGIKVLLVSDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE 124
Query: 416 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN 595
NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN
Sbjct: 125 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN 184
Query: 596 AVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 775
AVDSEHEKNVMNDAWRLFQLEKATGNP HPFSKFGTGNKYTLETRPNQEGIDVRQELLKF
Sbjct: 185 AVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 244
Query: 776 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVXXXXXXXXXXXXXXXRQLYKI 955
HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNV +QLYKI
Sbjct: 245 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLKQLYKI 304
Query: 956 VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 1135
VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK
Sbjct: 305 VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 364
Query: 1136 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRF 1315
EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLR EGPQEWVFQECKDLNAVAFRF
Sbjct: 365 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRF 424
Query: 1316 KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS 1495
KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS
Sbjct: 425 KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS 484
Query: 1496 FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILSLEKEA 1675
FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLP KNEFIPTNFEILSLEKEA
Sbjct: 485 FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPMKNEFIPTNFEILSLEKEA 544
Query: 1676 TPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 1855
TPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL
Sbjct: 545 TPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 604
Query: 1856 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE 2035
NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE
Sbjct: 605 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE 664
Query: 2036 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 2215
AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH
Sbjct: 665 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 724
Query: 2216 IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 2395
IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE
Sbjct: 725 IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 784
Query: 2396 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 2575
VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ
Sbjct: 785 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 844
Query: 2576 GLRFIIQSEKPPHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAEC 2755
GLRFIIQSEKPPHYLESRVEAFL+TMEKSIEDM EEAFQKHIQALAIRRLDKPKKLSAEC
Sbjct: 845 GLRFIIQSEKPPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAEC 904
Query: 2756 AKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 2935
AKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD
Sbjct: 905 AKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 964
Query: 2936 SCPVVGEFPSQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 3100
SCPVVGEFP QNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL
Sbjct: 965 SCPVVGEFPCQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 1019
>ref|NP_001193920.1| nardilysin [Bos taurus].
Length = 1231
Score = 514 bits (1324), Expect = e-145
Identities = 312/971 (32%), Positives = 515/971 (53%), Gaps = 19/971 (1%)
Frame = +2
Query: 149 KKTYSKMNNSAIKRLGNHIIKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIG 328
K TY+KM+++ + + N + R A + + T S+AAL V +G
Sbjct: 241 KSTYTKMSSTQLFKTRNLNGVVGAESRSAPVQHFAGWQEEEQQGETDTVLSAAALCVGVG 300
Query: 329 SLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSH 508
S +DP ++ GL+HF EHM+F+G+ KYP EN + FL +H GS NA T E T + FDV
Sbjct: 301 SFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERTVFQFDVQR 360
Query: 509 EHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPNHPF 688
++ + ALDR+AQFF+ PL DREV AVDSE++ +DA R L + P HP
Sbjct: 361 KYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANRKEMLFGSLARPGHPM 420
Query: 689 SKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLGRESLDDLTNLVVKLF 868
KF GN TL+ P + D L +F YYS++ M + V +E+LD L V ++F
Sbjct: 421 GKFFWGNAETLKHEPKRNNTDTHARLREFWLRYYSAHYMTLVVQSKETLDTLEKWVTEIF 480
Query: 869 SEVENKNV--XXXXXXXXXXXXXXXRQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHY 1042
S++ N + +LY++VPI+ I L +T+ +P Q++Y+ P HY
Sbjct: 481 SQIPNNGLPKPNFGHLTDPFDTPAFNKLYRVVPIRKIHALTITWALPPQQQHYRVKPLHY 540
Query: 1043 LGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGA----RGFMFFIINVDLTEEGLLHVED 1210
+ L+GHEG GS+LS L+ K W L GG E + F I++ LT+EG H +
Sbjct: 541 ISWLVGHEGKGSILSYLRKKCWALALFGGNGETGFEQNSTYSVFSISITLTDEGYEHFYE 600
Query: 1211 IILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEV 1390
+ +FQY++ L+ GP++ +F+E + + F ++++ P Y + + YPL++
Sbjct: 601 VAHTVFQYLKMLQKLGPEKRIFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPLQDF 660
Query: 1391 LTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDEV 1570
LT + LL E++P++I L++L P+ + ++S + EGK D E+W+GTQY E I +
Sbjct: 661 LTGDQLLFEYKPEVIAEALNQLVPQKANLVLLSGANEGKCDLKEKWFGTQYSMEDIENSW 720
Query: 1571 IKKWQ-NADLNGKFKLPTKNEFIPTNFEILSLEKEATPYPSLIKDTAMSKLWFKQDDKFF 1747
+ W+ + +LN LP +N++I T+F + + + T YP I +T LW+K+D+KF
Sbjct: 721 AELWKSDFELNPDLHLPAENKYIATDFMLKAFDCPETEYPVKIVNTPQGCLWYKKDNKFK 780
Query: 1748 LPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMY 1927
+PKA + F SP + + +++ +L +L E AY A++A L Y L +G+
Sbjct: 781 IPKAYIRFHLISPLIQKSAANVVLFDIFVNILTHNLAEPAYEADVAQLEYKLVAGEHGLI 840
Query: 1928 LSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLRL 2107
+ VKG+N K P+L + II+ +A F F +I E ++ N +P A L
Sbjct: 841 IRVKGFNHKLPLLFQLIIDYLAEFSSTPAVFTMITEQLKKTYFNILI-KPETLAKDVRLL 899
Query: 2108 LMTEVAWTK-DELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 2284
++ W+ D+ + +D ++L L +F+ + ++L +E L+ GN+T + ++ V D
Sbjct: 900 ILEYSRWSMIDKYRALMDGLSLESLLSFVREFKAQLFVEGLVQGNVTSTESTDFLKYVVD 959
Query: 2285 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQR--NEVHNNCGIEIYYQTDMQSTSEN 2458
L + PL V+++ V+LP G + + R N N + +YYQ+ +S E
Sbjct: 960 KL----NFMPLEQEMPVQFQVVELPS-GHHLCKVRALNRGDANSEVTVYYQSGARSLKEY 1014
Query: 2459 MFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPH---YLESR 2629
+EL + EPCF+ LRTK+ LGY V+ R +GI G + ++ + ++ +
Sbjct: 1015 TLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQATKYNSEVVDKK 1074
Query: 2630 VEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDN 2809
+E FL + E+ IE++ E+AF + AL + + L E + W E++++QY FDR
Sbjct: 1075 IEEFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTRQYLFDRLA 1134
Query: 2810 IEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLA-----REMDSCPVVGEFPSQND 2974
E+ LK+ +K D++ ++K A P +SVHV+ E D P + S D
Sbjct: 1135 HEIEALKSFSKSDLVNWFK---AHRGPGSKMLSVHVVGFGKYELEEDGTPSGEDSNSSCD 1191
Query: 2975 I-NLSQAPALP 3004
+ L+ PA P
Sbjct: 1192 VMQLTYLPASP 1202
>ref|XP_001789518.1| PREDICTED: mitochondrial-processing peptidase subunit beta-like
[Bos taurus].
Length = 490
Score = 52.4 bits (124), Expect = 3e-06
Identities = 62/255 (24%), Positives = 101/255 (39%), Gaps = 7/255 (2%)
Frame = +2
Query: 131 RLCGFQKKTYSKMNNSAIKRLGNHIIKSPE-------DKREYRGLELANGIKVLLISDPT 289
RLCGF ++ G + ++S + + E R L NG++V D
Sbjct: 18 RLCGFTERLLIGGAAGRSLYFGGNRLRSTQAAAQVVLNVPETRVTCLENGLRVAS-EDSG 76
Query: 290 TDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFT 469
+ L + GS + G +HF EHM F GTKK + + + NA+T
Sbjct: 77 LATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKK-RSQLDLELEIENMGAHLNAYT 135
Query: 470 SGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLF 649
S E T YY + L A++ A E+ +RE + E ++ N +F
Sbjct: 136 SREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVF 195
Query: 650 QLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLGRE 829
AT N + L N + I+ R++L+ + +T+Y + + G
Sbjct: 196 DYLHATAYQNTAL------GRTILGPTENIKSIN-RKDLVDYITTHYKGPRIVLAAAGGV 248
Query: 830 SLDDLTNLVVKLFSE 874
S D+L +L F E
Sbjct: 249 SHDELLDLAKFHFGE 263
>ref|NP_001029785.1| mitochondrial-processing peptidase subunit beta precursor [Bos
taurus].
Length = 490
Score = 52.0 bits (123), Expect = 3e-06
Identities = 62/255 (24%), Positives = 100/255 (39%), Gaps = 7/255 (2%)
Frame = +2
Query: 131 RLCGFQKKTYSKMNNSAIKRLGNHIIKSPE-------DKREYRGLELANGIKVLLISDPT 289
RLCGF ++ G + ++S + + E R L NG++V D
Sbjct: 18 RLCGFTERLLIGGAAGRSLYFGGNRLRSTQAAAQVVLNVPETRVTCLENGLRVAS-EDSG 76
Query: 290 TDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFT 469
+ L + GS + G +HF EHM F GTKK + + + NA+T
Sbjct: 77 LATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKK-RSQLDLELEIENMGAHLNAYT 135
Query: 470 SGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLF 649
S E T YY + L A++ A E+ +RE + E ++ N +F
Sbjct: 136 SREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEVVF 195
Query: 650 QLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLGRE 829
AT N + L N + I+ R++L+ + +T+Y + + G
Sbjct: 196 DYLHATAYQNTAL------GRTILGPTENIKSIN-RKDLVDYITTHYKGPRIVLAAAGGV 248
Query: 830 SLDDLTNLVVKLFSE 874
S D+L L F E
Sbjct: 249 SHDELLELAKFHFGE 263
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 106,980,390
Number of extensions: 2568538
Number of successful extensions: 7172
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 7147
Number of HSP's successfully gapped: 4
Length of query: 1078
Length of database: 17,681,374
Length adjustment: 113
Effective length of query: 965
Effective length of database: 13,942,430
Effective search space: 13454444950
Effective search space used: 13454444950
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0147_F05
(3235 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_004960.2| insulin-degrading enzyme isoform 1 precursor [H... 1999 0.0
Alignment gi|NP_001159418.1| insulin-degrading enzyme isoform 2 [Homo sap... 931 0.0
Alignment gi|NP_002516.2| nardilysin isoform a [Homo sapiens]. 528 e-149
Alignment gi|NP_001229290.1| nardilysin isoform c [Homo sapiens]. 528 e-149
Alignment gi|NP_001095132.1| nardilysin isoform b [Homo sapiens]. 526 e-149
>ref|NP_004960.2| insulin-degrading enzyme isoform 1 precursor [Homo sapiens].
Length = 1019
Score = 1999 bits (5179), Expect = 0.0
Identities = 985/1015 (97%), Positives = 990/1015 (97%)
Frame = +2
Query: 56 LAWLLHPALPSTFRSVLGARLPPLERLCGFQKKTYSKMNNSAIKRLGNHIIKSPEDKREY 235
LAWLLHPALPSTFRSVLGARLPP ERLCGFQKKTYSKMNN AIKR+GNHI KSPEDKREY
Sbjct: 5 LAWLLHPALPSTFRSVLGARLPPPERLCGFQKKTYSKMNNPAIKRIGNHITKSPEDKREY 64
Query: 236 RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE 415
RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE
Sbjct: 65 RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE 124
Query: 416 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN 595
NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN
Sbjct: 125 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN 184
Query: 596 AVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 775
AVDSEHEKNVMNDAWRLFQLEKATGNP HPFSKFGTGNKYTLETRPNQEGIDVRQELLKF
Sbjct: 185 AVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 244
Query: 776 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVXXXXXXXXXXXXXXXRQLYKI 955
HS YYSSNLMA+CVLGRESLDDLTNLVVKLFSEVENKNV +QLYKI
Sbjct: 245 HSAYYSSNLMAVCVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLKQLYKI 304
Query: 956 VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 1135
VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK
Sbjct: 305 VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 364
Query: 1136 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRF 1315
EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLR EGPQEWVFQECKDLNAVAFRF
Sbjct: 365 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRF 424
Query: 1316 KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS 1495
KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS
Sbjct: 425 KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS 484
Query: 1496 FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILSLEKEA 1675
FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEIL LEKEA
Sbjct: 485 FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEA 544
Query: 1676 TPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 1855
TPYP+LIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL
Sbjct: 545 TPYPALIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 604
Query: 1856 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE 2035
NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE
Sbjct: 605 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE 664
Query: 2036 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 2215
AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH
Sbjct: 665 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 724
Query: 2216 IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 2395
IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE
Sbjct: 725 IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 784
Query: 2396 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 2575
VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ
Sbjct: 785 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 844
Query: 2576 GLRFIIQSEKPPHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAEC 2755
GLRFIIQSEKPPHYLESRVEAFL+TMEKSIEDM EEAFQKHIQALAIRRLDKPKKLSAEC
Sbjct: 845 GLRFIIQSEKPPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAEC 904
Query: 2756 AKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 2935
AKYWGEIISQQYNFDRDN EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD
Sbjct: 905 AKYWGEIISQQYNFDRDNTEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 964
Query: 2936 SCPVVGEFPSQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 3100
SCPVVGEFP QNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL
Sbjct: 965 SCPVVGEFPCQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 1019
>ref|NP_001159418.1| insulin-degrading enzyme isoform 2 [Homo sapiens].
Length = 464
Score = 931 bits (2407), Expect = 0.0
Identities = 460/464 (99%), Positives = 461/464 (99%)
Frame = +2
Query: 1709 MSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAG 1888
MSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAG
Sbjct: 1 MSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAG 60
Query: 1889 LSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRA 2068
LSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRA
Sbjct: 61 LSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRA 120
Query: 2069 EQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITK 2248
EQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITK
Sbjct: 121 EQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITK 180
Query: 2249 QAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYY 2428
QAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYY
Sbjct: 181 QAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYY 240
Query: 2429 QTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKP 2608
QTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKP
Sbjct: 241 QTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKP 300
Query: 2609 PHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQ 2788
PHYLESRVEAFL+TMEKSIEDM EEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQ
Sbjct: 301 PHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQ 360
Query: 2789 YNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQ 2968
YNFDRDN EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFP Q
Sbjct: 361 YNFDRDNTEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPCQ 420
Query: 2969 NDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 3100
NDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL
Sbjct: 421 NDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 464
>ref|NP_002516.2| nardilysin isoform a [Homo sapiens].
Length = 1219
Score = 528 bits (1360), Expect = e-149
Identities = 316/958 (32%), Positives = 509/958 (53%), Gaps = 12/958 (1%)
Frame = +2
Query: 149 KKTYSKMNNSAIKRLGNHIIKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIG 328
K TYSKM+++ + N + R LA + T S+AAL V +G
Sbjct: 229 KSTYSKMSSTLLVETRNLYGVVGAESRSAPVQHLAGWQAEEQQGETDTVLSAAALCVGVG 288
Query: 329 SLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSH 508
S +DP ++ GL+HF EHM+F+G+ KYP EN + FL +H GS NA T E T + FDV
Sbjct: 289 SFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERTVFQFDVQR 348
Query: 509 EHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPNHPF 688
++ + ALDR+AQFF+ PL DREV AVDSE++ +DA R L + P HP
Sbjct: 349 KYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANRKEMLFGSLARPGHPM 408
Query: 689 SKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLGRESLDDLTNLVVKLF 868
KF GN TL+ P + ID L +F YYSS+ M + V +E+LD L V ++F
Sbjct: 409 GKFFWGNAETLKHEPRKNNIDTHARLREFWMRYYSSHYMTLVVQSKETLDTLEKWVTEIF 468
Query: 869 SEVENKNV--XXXXXXXXXXXXXXXRQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHY 1042
S++ N + +LY++VPI+ I L +T+ +P Q++Y+ P HY
Sbjct: 469 SQIPNNGLPRPNFGHLTDPFDTPAFNKLYRVVPIRKIHALTITWALPPQQQHYRVKPLHY 528
Query: 1043 LGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGA----RGFMFFIINVDLTEEGLLHVED 1210
+ L+GHEG GS+LS L+ K W L GG E + F I++ LT+EG H +
Sbjct: 529 ISWLVGHEGKGSILSFLRKKCWALALFGGNGETGFEQNSTYSVFSISITLTDEGYEHFYE 588
Query: 1211 IILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEV 1390
+ +FQY++ L+ GP++ +F+E + + F ++++ P Y + + YPL+++
Sbjct: 589 VAYTVFQYLKMLQKLGPEKRIFEEIRKIEDNEFHYQEQTDPVEYVENMCENMQLYPLQDI 648
Query: 1391 LTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDEV 1570
LT + LL E++P++I L++L P+ + ++S + EGK D E+W+GTQY E I +
Sbjct: 649 LTGDQLLFEYKPEVIGEALNQLVPQKANLVLLSGANEGKCDLKEKWFGTQYSIEDIENSW 708
Query: 1571 IKKW-QNADLNGKFKLPTKNEFIPTNFEILSLEKEATPYPSLIKDTAMSKLWFKQDDKFF 1747
+ W N +LN LP +N++I T+F + + + T YP I +T LW+K+D+KF
Sbjct: 709 AELWNSNFELNPDLHLPAENKYIATDFTLKAFDCPETEYPVKIVNTPQGCLWYKKDNKFK 768
Query: 1748 LPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMY 1927
+PKA + F SP + + +++ +L +L E AY A++A L Y L +G+
Sbjct: 769 IPKAYIRFHLISPLIQKSAANVVLFDIFVNILTHNLAEPAYEADVAQLEYKLVAGEHGLI 828
Query: 1928 LSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLRL 2107
+ VKG+N K P+L + II+ +A F F +I E ++ N +P A L
Sbjct: 829 IRVKGFNHKLPLLFQLIIDYLAEFNSTPAVFTMITEQLKKTYFNILI-KPETLAKDVRLL 887
Query: 2108 LMTEVAWTK-DELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 2284
++ W+ D+ + +D ++L L +F+ + S+L +E L+ GN+T ++ ++ V D
Sbjct: 888 ILEYARWSMIDKYQALMDGLSLESLLSFVKEFKSQLFVEGLVQGNVTSTESMDFLKYVVD 947
Query: 2285 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFV-YQQRNEVHNNCGIEIYYQTDMQSTSENM 2461
L + KPL V+++ V+LP + N+ N + +YYQ+ +S E
Sbjct: 948 KL----NFKPLEQEMPVQFQVVELPSGHHLCKVKALNKGDANSEVTVYYQSGTRSLREYT 1003
Query: 2462 FLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPH---YLESRV 2632
+EL + EPCF+ LRTK+ LGY V+ R +GI G + ++ + ++ ++
Sbjct: 1004 LMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQATKYNSEVVDKKI 1063
Query: 2633 EAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNI 2812
E FL + E+ IE++ EEAF + AL + + L E + W E+++QQY FDR
Sbjct: 1064 EEFLSSFEEKIENLTEEAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQYLFDRLAH 1123
Query: 2813 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLS 2986
E+ LK+ +K D++ ++K A P +SVHV+ G PS D N S
Sbjct: 1124 EIEALKSFSKSDLVNWFK---AHRGPGSKMLSVHVVGYGKYELEEDGT-PSSEDSNSS 1177
>ref|NP_001229290.1| nardilysin isoform c [Homo sapiens].
Length = 1087
Score = 528 bits (1360), Expect = e-149
Identities = 316/958 (32%), Positives = 509/958 (53%), Gaps = 12/958 (1%)
Frame = +2
Query: 149 KKTYSKMNNSAIKRLGNHIIKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIG 328
K TYSKM+++ + N + R LA + T S+AAL V +G
Sbjct: 97 KSTYSKMSSTLLVETRNLYGVVGAESRSAPVQHLAGWQAEEQQGETDTVLSAAALCVGVG 156
Query: 329 SLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSH 508
S +DP ++ GL+HF EHM+F+G+ KYP EN + FL +H GS NA T E T + FDV
Sbjct: 157 SFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERTVFQFDVQR 216
Query: 509 EHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPNHPF 688
++ + ALDR+AQFF+ PL DREV AVDSE++ +DA R L + P HP
Sbjct: 217 KYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANRKEMLFGSLARPGHPM 276
Query: 689 SKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLGRESLDDLTNLVVKLF 868
KF GN TL+ P + ID L +F YYSS+ M + V +E+LD L V ++F
Sbjct: 277 GKFFWGNAETLKHEPRKNNIDTHARLREFWMRYYSSHYMTLVVQSKETLDTLEKWVTEIF 336
Query: 869 SEVENKNV--XXXXXXXXXXXXXXXRQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHY 1042
S++ N + +LY++VPI+ I L +T+ +P Q++Y+ P HY
Sbjct: 337 SQIPNNGLPRPNFGHLTDPFDTPAFNKLYRVVPIRKIHALTITWALPPQQQHYRVKPLHY 396
Query: 1043 LGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGA----RGFMFFIINVDLTEEGLLHVED 1210
+ L+GHEG GS+LS L+ K W L GG E + F I++ LT+EG H +
Sbjct: 397 ISWLVGHEGKGSILSFLRKKCWALALFGGNGETGFEQNSTYSVFSISITLTDEGYEHFYE 456
Query: 1211 IILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEV 1390
+ +FQY++ L+ GP++ +F+E + + F ++++ P Y + + YPL+++
Sbjct: 457 VAYTVFQYLKMLQKLGPEKRIFEEIRKIEDNEFHYQEQTDPVEYVENMCENMQLYPLQDI 516
Query: 1391 LTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDEV 1570
LT + LL E++P++I L++L P+ + ++S + EGK D E+W+GTQY E I +
Sbjct: 517 LTGDQLLFEYKPEVIGEALNQLVPQKANLVLLSGANEGKCDLKEKWFGTQYSIEDIENSW 576
Query: 1571 IKKW-QNADLNGKFKLPTKNEFIPTNFEILSLEKEATPYPSLIKDTAMSKLWFKQDDKFF 1747
+ W N +LN LP +N++I T+F + + + T YP I +T LW+K+D+KF
Sbjct: 577 AELWNSNFELNPDLHLPAENKYIATDFTLKAFDCPETEYPVKIVNTPQGCLWYKKDNKFK 636
Query: 1748 LPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMY 1927
+PKA + F SP + + +++ +L +L E AY A++A L Y L +G+
Sbjct: 637 IPKAYIRFHLISPLIQKSAANVVLFDIFVNILTHNLAEPAYEADVAQLEYKLVAGEHGLI 696
Query: 1928 LSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLRL 2107
+ VKG+N K P+L + II+ +A F F +I E ++ N +P A L
Sbjct: 697 IRVKGFNHKLPLLFQLIIDYLAEFNSTPAVFTMITEQLKKTYFNILI-KPETLAKDVRLL 755
Query: 2108 LMTEVAWTK-DELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 2284
++ W+ D+ + +D ++L L +F+ + S+L +E L+ GN+T ++ ++ V D
Sbjct: 756 ILEYARWSMIDKYQALMDGLSLESLLSFVKEFKSQLFVEGLVQGNVTSTESMDFLKYVVD 815
Query: 2285 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFV-YQQRNEVHNNCGIEIYYQTDMQSTSENM 2461
L + KPL V+++ V+LP + N+ N + +YYQ+ +S E
Sbjct: 816 KL----NFKPLEQEMPVQFQVVELPSGHHLCKVKALNKGDANSEVTVYYQSGTRSLREYT 871
Query: 2462 FLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPH---YLESRV 2632
+EL + EPCF+ LRTK+ LGY V+ R +GI G + ++ + ++ ++
Sbjct: 872 LMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQATKYNSEVVDKKI 931
Query: 2633 EAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNI 2812
E FL + E+ IE++ EEAF + AL + + L E + W E+++QQY FDR
Sbjct: 932 EEFLSSFEEKIENLTEEAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQYLFDRLAH 991
Query: 2813 EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQNDINLS 2986
E+ LK+ +K D++ ++K A P +SVHV+ G PS D N S
Sbjct: 992 EIEALKSFSKSDLVNWFK---AHRGPGSKMLSVHVVGYGKYELEEDGT-PSSEDSNSS 1045
>ref|NP_001095132.1| nardilysin isoform b [Homo sapiens].
Length = 1151
Score = 526 bits (1354), Expect = e-149
Identities = 308/913 (33%), Positives = 496/913 (54%), Gaps = 13/913 (1%)
Frame = +2
Query: 287 TTDK-SSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNA 463
TT+K S+AAL V +GS +DP ++ GL+HF EHM+F+G+ KYP EN + FL +H GS NA
Sbjct: 206 TTEKQSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNA 265
Query: 464 FTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWR 643
T E T + FDV ++ + ALDR+AQFF+ PL DREV AVDSE++ +DA R
Sbjct: 266 STDCERTVFQFDVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANR 325
Query: 644 LFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLG 823
L + P HP KF GN TL+ P + ID L +F YYSS+ M + V
Sbjct: 326 KEMLFGSLARPGHPMGKFFWGNAETLKHEPRKNNIDTHARLREFWMRYYSSHYMTLVVQS 385
Query: 824 RESLDDLTNLVVKLFSEVENKNV--XXXXXXXXXXXXXXXRQLYKIVPIKDIRNLYVTFP 997
+E+LD L V ++FS++ N + +LY++VPI+ I L +T+
Sbjct: 386 KETLDTLEKWVTEIFSQIPNNGLPRPNFGHLTDPFDTPAFNKLYRVVPIRKIHALTITWA 445
Query: 998 IPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGA----RGFMFFI 1165
+P Q++Y+ P HY+ L+GHEG GS+LS L+ K W L GG E + F
Sbjct: 446 LPPQQQHYRVKPLHYISWLVGHEGKGSILSFLRKKCWALALFGGNGETGFEQNSTYSVFS 505
Query: 1166 INVDLTEEGLLHVEDIILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRFKDKERPRGYT 1345
I++ LT+EG H ++ +FQY++ L+ GP++ +F+E + + F ++++ P Y
Sbjct: 506 ISITLTDEGYEHFYEVAYTVFQYLKMLQKLGPEKRIFEEIRKIEDNEFHYQEQTDPVEYV 565
Query: 1346 SKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEE 1525
+ + YPL+++LT + LL E++P++I L++L P+ + ++S + EGK D E+
Sbjct: 566 ENMCENMQLYPLQDILTGDQLLFEYKPEVIGEALNQLVPQKANLVLLSGANEGKCDLKEK 625
Query: 1526 WYGTQYKQEAIPDEVIKKW-QNADLNGKFKLPTKNEFIPTNFEILSLEKEATPYPSLIKD 1702
W+GTQY E I + + W N +LN LP +N++I T+F + + + T YP I +
Sbjct: 626 WFGTQYSIEDIENSWAELWNSNFELNPDLHLPAENKYIATDFTLKAFDCPETEYPVKIVN 685
Query: 1703 TAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAEL 1882
T LW+K+D+KF +PKA + F SP + + +++ +L +L E AY A++
Sbjct: 686 TPQGCLWYKKDNKFKIPKAYIRFHLISPLIQKSAANVVLFDIFVNILTHNLAEPAYEADV 745
Query: 1883 AGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNF 2062
A L Y L +G+ + VKG+N K P+L + II+ +A F F +I E ++ N
Sbjct: 746 AQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLAEFNSTPAVFTMITEQLKKTYFNI 805
Query: 2063 RAEQPHQHAMYYLRLLMTEVAWTK-DELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGN 2239
+P A L++ W+ D+ + +D ++L L +F+ + S+L +E L+ GN
Sbjct: 806 LI-KPETLAKDVRLLILEYARWSMIDKYQALMDGLSLESLLSFVKEFKSQLFVEGLVQGN 864
Query: 2240 ITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFV-YQQRNEVHNNCGI 2416
+T ++ ++ V D L + KPL V+++ V+LP + N+ N +
Sbjct: 865 VTSTESMDFLKYVVDKL----NFKPLEQEMPVQFQVVELPSGHHLCKVKALNKGDANSEV 920
Query: 2417 EIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQ 2596
+YYQ+ +S E +EL + EPCF+ LRTK+ LGY V+ R +GI G +
Sbjct: 921 TVYYQSGTRSLREYTLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVG 980
Query: 2597 SEKPPH---YLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYW 2767
++ + ++ ++E FL + E+ IE++ EEAF + AL + + L E + W
Sbjct: 981 TQATKYNSEVVDKKIEEFLSSFEEKIENLTEEAFNTQVTALIKLKECEDTHLGEEVDRNW 1040
Query: 2768 GEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPV 2947
E+++QQY FDR E+ LK+ +K D++ ++K A P +SVHV+
Sbjct: 1041 NEVVTQQYLFDRLAHEIEALKSFSKSDLVNWFK---AHRGPGSKMLSVHVVGYGKYELEE 1097
Query: 2948 VGEFPSQNDINLS 2986
G PS D N S
Sbjct: 1098 DGT-PSSEDSNSS 1109
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 109,980,785
Number of extensions: 2635312
Number of successful extensions: 7572
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 7545
Number of HSP's successfully gapped: 5
Length of query: 1078
Length of database: 18,297,164
Length adjustment: 113
Effective length of query: 965
Effective length of database: 14,572,232
Effective search space: 14062203880
Effective search space used: 14062203880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0147_F05
(3235 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_534963.2| PREDICTED: similar to Insulin-degrading enzyme ... 1924 0.0
Alignment gi|XP_532578.2| PREDICTED: similar to nardilysin (N-arginine di... 524 e-148
Alignment gi|XP_859649.1| PREDICTED: similar to Nardilysin precursor (N-a... 523 e-148
Alignment gi|XP_533104.2| PREDICTED: similar to Mitochondrial processing ... 51 6e-06
Alignment gi|XP_851209.1| PREDICTED: similar to ubiquinol-cytochrome c re... 51 8e-06
>ref|XP_534963.2| PREDICTED: similar to Insulin-degrading enzyme (Insulysin)
(Insulinase) (Insulin protease) [Canis familiaris].
Length = 994
Score = 1924 bits (4984), Expect = 0.0
Identities = 959/1015 (94%), Positives = 964/1015 (94%)
Frame = +2
Query: 56 LAWLLHPALPSTFRSVLGARLPPLERLCGFQKKTYSKMNNSAIKRLGNHIIKSPEDKREY 235
LAWLLH A PSTFRSVLGARLP ERLCGFQ+K+YSKMNN AIKRLGNHIIKSPEDKREY
Sbjct: 5 LAWLLHSARPSTFRSVLGARLPLPERLCGFQEKSYSKMNNPAIKRLGNHIIKSPEDKREY 64
Query: 236 RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE 415
RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE
Sbjct: 65 RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE 124
Query: 416 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN 595
NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN
Sbjct: 125 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN 184
Query: 596 AVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 775
AVDSEHEKNVMNDAWRLFQLEKATGNP HPFSKFGTGNKYTLETRPNQEGIDVRQELLKF
Sbjct: 185 AVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 244
Query: 776 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVXXXXXXXXXXXXXXXRQLYKI 955
HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNV +QLYKI
Sbjct: 245 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLKQLYKI 304
Query: 956 VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 1135
VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK
Sbjct: 305 VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 364
Query: 1136 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRF 1315
EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLR EGPQEWVFQECKDLNAVAFRF
Sbjct: 365 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRF 424
Query: 1316 KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS 1495
KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS
Sbjct: 425 KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS 484
Query: 1496 FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILSLEKEA 1675
FEGKTDRTEEWYGTQYKQEA+PDEVIK ILSLEKEA
Sbjct: 485 FEGKTDRTEEWYGTQYKQEAVPDEVIK-------------------------ILSLEKEA 519
Query: 1676 TPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 1855
PYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL
Sbjct: 520 HPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 579
Query: 1856 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE 2035
NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE
Sbjct: 580 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE 639
Query: 2036 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 2215
AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH
Sbjct: 640 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 699
Query: 2216 IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 2395
IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE
Sbjct: 700 IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 759
Query: 2396 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 2575
VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ
Sbjct: 760 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 819
Query: 2576 GLRFIIQSEKPPHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAEC 2755
GLRFIIQSEKPPHYLESRVEAFL+TMEKSIEDM EEAFQKHIQALAIRRLDKPKKLSAEC
Sbjct: 820 GLRFIIQSEKPPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAEC 879
Query: 2756 AKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 2935
AKYWGEIISQQYNFDRDN EVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD
Sbjct: 880 AKYWGEIISQQYNFDRDNTEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 939
Query: 2936 SCPVVGEFPSQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 3100
SCPVVGEFP QNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL
Sbjct: 940 SCPVVGEFPCQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 994
>ref|XP_532578.2| PREDICTED: similar to nardilysin (N-arginine dibasic convertase)
isoform 1 [Canis familiaris].
Length = 1227
Score = 524 bits (1350), Expect = e-148
Identities = 315/970 (32%), Positives = 516/970 (53%), Gaps = 18/970 (1%)
Frame = +2
Query: 149 KKTYSKMNNSAIKRLGNHIIKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIG 328
K TY+KM+++ + N + R LA + + T S+AAL V +G
Sbjct: 238 KSTYTKMSSTLLVETRNLNGVVGAESRSAPVQHLAGWQEEEQQGETDTVLSAAALCVGVG 297
Query: 329 SLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSH 508
S +DP ++ GL+HF EHM+F+G+ KYP EN + FL +H GS NA T E T + FDV
Sbjct: 298 SFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERTVFQFDVQR 357
Query: 509 EHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPNHPF 688
++ + ALDR+AQFF+ PL DREV AVDSE++ +DA R L + P HP
Sbjct: 358 KYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANRKEMLFGSLARPGHPM 417
Query: 689 SKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLGRESLDDLTNLVVKLF 868
KF GN TL+ P + ID L +F YYS++ M + V +E+LD L V ++F
Sbjct: 418 GKFFWGNAETLKHEPKRNNIDTHARLREFWMRYYSAHYMTLVVQSKETLDTLEKWVTEIF 477
Query: 869 SEVENKNV--XXXXXXXXXXXXXXXRQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHY 1042
S++ N + +LY++VPI+ I L +T+ +P Q++Y+ P HY
Sbjct: 478 SQIPNNGLPKPNFGHLTDPFDTPAFNKLYRVVPIRKIHALTITWALPPQQQHYRVKPLHY 537
Query: 1043 LGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGA----RGFMFFIINVDLTEEGLLHVED 1210
+ L+GHEG GS+LS L+ K W L GG E + F I++ LT+EG H +
Sbjct: 538 ISWLVGHEGKGSILSYLRKKCWALALFGGNGETGFEQNSTYSVFSISITLTDEGYEHFYE 597
Query: 1211 IILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEV 1390
+ +FQY++ L+ GP++ +F+E + + F ++++ P Y + + YPL++
Sbjct: 598 VAHTVFQYLKMLQKLGPEKRIFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQLYPLQDF 657
Query: 1391 LTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDEV 1570
LT + LL E++P++I L++L P+ + ++S + EGK D E+W+GTQY E + +
Sbjct: 658 LTGDQLLFEYKPEVIAEALNQLVPQKANLVLLSGANEGKCDLKEKWFGTQYSMEDVENSW 717
Query: 1571 IKKWQ-NADLNGKFKLPTKNEFIPTNFEILSLEKEATPYPSLIKDTAMSKLWFKQDDKFF 1747
+ W+ N +LN LP +N++I T+F + + + T YP I +T LW+K+D+KF
Sbjct: 718 AELWKTNFELNPDLHLPAENKYIATDFMLKAFDCPETEYPVKIVNTPQGCLWYKKDNKFK 777
Query: 1748 LPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMY 1927
+PKA + F SP + + +++ +L +L E AY A++A L Y L +G+
Sbjct: 778 IPKAYIRFHLISPLIQKSAANVVLFDIFVNILTHNLAEPAYEADVAQLEYKLVAGEHGLI 837
Query: 1928 LSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLRL 2107
+ VKG+N K P+L + II+ +A F F +I E ++ N +P A L
Sbjct: 838 IRVKGFNHKLPLLFQLIIDYLAEFSSTPAVFTMITEQLKKTYFNILI-KPETLAKDVRLL 896
Query: 2108 LMTEVAWTK-DELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVED 2284
++ W+ D+ + +D ++L L +F+ + S+L +E L+ GN+T ++ ++ V D
Sbjct: 897 ILEYARWSMIDKYRALMDGLSLESLLSFVKEFKSQLFVEGLVQGNVTSTESMDFLKYVVD 956
Query: 2285 TLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQR--NEVHNNCGIEIYYQTDMQSTSEN 2458
L + PL V+++ V+LP G + + R N+ N + +YYQ+ +S E
Sbjct: 957 KL----NFMPLEQEMPVQFQVVELPG-GHHLCKVRALNKGDANSEVTVYYQSGTRSLKEY 1011
Query: 2459 MFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPH---YLESR 2629
+EL + EPCF+ LRTK+ LGY V+ R +GI G + ++ + ++ +
Sbjct: 1012 TLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQATKYNSEIVDKK 1071
Query: 2630 VEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDN 2809
+E FL + E+ IE++ E+AF + AL + + L E + W E+++QQY FDR
Sbjct: 1072 IEEFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQYLFDRLA 1131
Query: 2810 IEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLA-----REMDSCPVVGEFPSQND 2974
E+ LK+ +K D++ ++K A P +SVHV+ E D P E S
Sbjct: 1132 HEIEALKSFSKSDLVSWFK---AHRGPGSKMLSVHVVGFGKYEPEEDGSPSGEESHSCEV 1188
Query: 2975 INLSQAPALP 3004
+ L+ P P
Sbjct: 1189 MQLTYLPTSP 1198
>ref|XP_859649.1| PREDICTED: similar to Nardilysin precursor (N-arginine dibasic
convertase) (NRD convertase) (NRD-C) isoform 2 [Canis
familiaris].
Length = 1159
Score = 523 bits (1347), Expect = e-148
Identities = 308/925 (33%), Positives = 502/925 (54%), Gaps = 19/925 (2%)
Frame = +2
Query: 287 TTDK-SSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNA 463
TT+K S+AAL V +GS +DP ++ GL+HF EHM+F+G+ KYP EN + FL +H GS NA
Sbjct: 215 TTEKQSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNA 274
Query: 464 FTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWR 643
T E T + FDV ++ + ALDR+AQFF+ PL DREV AVDSE++ +DA R
Sbjct: 275 STDCERTVFQFDVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANR 334
Query: 644 LFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLG 823
L + P HP KF GN TL+ P + ID L +F YYS++ M + V
Sbjct: 335 KEMLFGSLARPGHPMGKFFWGNAETLKHEPKRNNIDTHARLREFWMRYYSAHYMTLVVQS 394
Query: 824 RESLDDLTNLVVKLFSEVENKNV--XXXXXXXXXXXXXXXRQLYKIVPIKDIRNLYVTFP 997
+E+LD L V ++FS++ N + +LY++VPI+ I L +T+
Sbjct: 395 KETLDTLEKWVTEIFSQIPNNGLPKPNFGHLTDPFDTPAFNKLYRVVPIRKIHALTITWA 454
Query: 998 IPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGA----RGFMFFI 1165
+P Q++Y+ P HY+ L+GHEG GS+LS L+ K W L GG E + F
Sbjct: 455 LPPQQQHYRVKPLHYISWLVGHEGKGSILSYLRKKCWALALFGGNGETGFEQNSTYSVFS 514
Query: 1166 INVDLTEEGLLHVEDIILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRFKDKERPRGYT 1345
I++ LT+EG H ++ +FQY++ L+ GP++ +F+E + + F ++++ P Y
Sbjct: 515 ISITLTDEGYEHFYEVAHTVFQYLKMLQKLGPEKRIFEEIQKIEDNEFHYQEQTDPVEYV 574
Query: 1346 SKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEE 1525
+ + YPL++ LT + LL E++P++I L++L P+ + ++S + EGK D E+
Sbjct: 575 ENMCENMQLYPLQDFLTGDQLLFEYKPEVIAEALNQLVPQKANLVLLSGANEGKCDLKEK 634
Query: 1526 WYGTQYKQEAIPDEVIKKWQ-NADLNGKFKLPTKNEFIPTNFEILSLEKEATPYPSLIKD 1702
W+GTQY E + + + W+ N +LN LP +N++I T+F + + + T YP I +
Sbjct: 635 WFGTQYSMEDVENSWAELWKTNFELNPDLHLPAENKYIATDFMLKAFDCPETEYPVKIVN 694
Query: 1703 TAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAEL 1882
T LW+K+D+KF +PKA + F SP + + +++ +L +L E AY A++
Sbjct: 695 TPQGCLWYKKDNKFKIPKAYIRFHLISPLIQKSAANVVLFDIFVNILTHNLAEPAYEADV 754
Query: 1883 AGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNF 2062
A L Y L +G+ + VKG+N K P+L + II+ +A F F +I E ++ N
Sbjct: 755 AQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLAEFSSTPAVFTMITEQLKKTYFNI 814
Query: 2063 RAEQPHQHAMYYLRLLMTEVAWTK-DELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGN 2239
+P A L++ W+ D+ + +D ++L L +F+ + S+L +E L+ GN
Sbjct: 815 LI-KPETLAKDVRLLILEYARWSMIDKYRALMDGLSLESLLSFVKEFKSQLFVEGLVQGN 873
Query: 2240 ITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQR--NEVHNNCG 2413
+T ++ ++ V D L + PL V+++ V+LP G + + R N+ N
Sbjct: 874 VTSTESMDFLKYVVDKL----NFMPLEQEMPVQFQVVELPG-GHHLCKVRALNKGDANSE 928
Query: 2414 IEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFII 2593
+ +YYQ+ +S E +EL + EPCF+ LRTK+ LGY V+ R +GI G +
Sbjct: 929 VTVYYQSGTRSLKEYTLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTV 988
Query: 2594 QSEKPPH---YLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKY 2764
++ + ++ ++E FL + E+ IE++ E+AF + AL + + L E +
Sbjct: 989 GTQATKYNSEIVDKKIEEFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRN 1048
Query: 2765 WGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLA-----RE 2929
W E+++QQY FDR E+ LK+ +K D++ ++K A P +SVHV+ E
Sbjct: 1049 WNEVVTQQYLFDRLAHEIEALKSFSKSDLVSWFK---AHRGPGSKMLSVHVVGFGKYEPE 1105
Query: 2930 MDSCPVVGEFPSQNDINLSQAPALP 3004
D P E S + L+ P P
Sbjct: 1106 EDGSPSGEESHSCEVMQLTYLPTSP 1130
>ref|XP_533104.2| PREDICTED: similar to Mitochondrial processing peptidase beta
subunit, mitochondrial precursor (Beta-MPP) (P-52)
[Canis familiaris].
Length = 513
Score = 51.2 bits (121), Expect = 6e-06
Identities = 53/208 (25%), Positives = 84/208 (40%)
Frame = +2
Query: 230 EYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYP 409
E R L NG++V D + L + GS + G +HF EHM F GTKK
Sbjct: 81 ETRVTRLDNGLRVAS-EDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKK-R 138
Query: 410 KENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDRE 589
+ + + NA+TS E T YY + L A++ A E+ +RE
Sbjct: 139 SQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERE 198
Query: 590 VNAVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELL 769
+ E ++ N +F AT N + L N + I+ R++L+
Sbjct: 199 RGVILREMQEVETNLQEVVFDYLHATAYQNTAL------GRTILGPTENIKSIN-RKDLV 251
Query: 770 KFHSTYYSSNLMAICVLGRESLDDLTNL 853
+ +T+Y + + G S D+L L
Sbjct: 252 DYITTHYKGPRIVLAAAGGVSHDELLEL 279
>ref|XP_851209.1| PREDICTED: similar to ubiquinol-cytochrome c reductase core protein
I isoform 2 [Canis familiaris].
Length = 480
Score = 50.8 bits (120), Expect = 8e-06
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 4/214 (1%)
Frame = +2
Query: 248 LANGIKVLL--ISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENE 421
L NG++V S PT + + + +GS + G +F EH+ F GTK P N
Sbjct: 53 LDNGLRVASEQSSQPTC---TVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRP-GNA 108
Query: 422 YSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFL-CPLFDESC-KDREVN 595
+ + NA+++ EHT YY + L A++ A C L D K+R+V
Sbjct: 109 LEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVI 168
Query: 596 AVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 775
+ + M D +F AT P ++ G + R +L ++
Sbjct: 169 LQELQENDACMRDV--VFDYLHATAFQGTPLAQAVEGPSGNVRKLS-------RADLTEY 219
Query: 776 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEV 877
S +Y + M + G L +L K FS V
Sbjct: 220 LSRHYKAPRMVLAAAGGVEHRQLLDLAQKHFSSV 253
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 111,701,614
Number of extensions: 2650635
Number of successful extensions: 7472
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 7452
Number of HSP's successfully gapped: 5
Length of query: 1078
Length of database: 18,874,504
Length adjustment: 113
Effective length of query: 965
Effective length of database: 15,107,536
Effective search space: 14578772240
Effective search space used: 14578772240
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0147_F05
(3235 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_112419.2| insulin-degrading enzyme [Mus musculus]. 1946 0.0
Alignment gi|NP_666262.2| nardilysin precursor [Mus musculus]. 523 e-148
>ref|NP_112419.2| insulin-degrading enzyme [Mus musculus].
Length = 1019
Score = 1946 bits (5040), Expect = 0.0
Identities = 952/1015 (93%), Positives = 979/1015 (96%)
Frame = +2
Query: 56 LAWLLHPALPSTFRSVLGARLPPLERLCGFQKKTYSKMNNSAIKRLGNHIIKSPEDKREY 235
L WLLHPALP T RS+LGAR PP +RLCGF K+TYS M+N AI+R+ + I+KSPEDKREY
Sbjct: 5 LVWLLHPALPGTLRSILGARPPPAKRLCGFPKQTYSTMSNPAIQRIEDQIVKSPEDKREY 64
Query: 236 RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE 415
RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNI GLSHFCEHMLFLGTKKYPKE
Sbjct: 65 RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIPGLSHFCEHMLFLGTKKYPKE 124
Query: 416 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN 595
NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFD SCKDREVN
Sbjct: 125 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDASCKDREVN 184
Query: 596 AVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 775
AVDSEHEKNVMNDAWRLFQLEKATGNP HPFSKFGTGNKYTLETRPNQEGIDVR+ELLKF
Sbjct: 185 AVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVREELLKF 244
Query: 776 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVXXXXXXXXXXXXXXXRQLYKI 955
HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNV RQLYKI
Sbjct: 245 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLRQLYKI 304
Query: 956 VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 1135
VPIKDIRNLYVTFPIPDLQ+YYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK
Sbjct: 305 VPIKDIRNLYVTFPIPDLQQYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 364
Query: 1136 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRF 1315
EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLR EGPQEWVFQECKDLNAVAFRF
Sbjct: 365 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRF 424
Query: 1316 KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS 1495
KDKERPRGYTSKIAG LHYYPL VLTAEYLLEEFRPDLI+MVLDKLRPENVRVAIVSKS
Sbjct: 425 KDKERPRGYTSKIAGKLHYYPLNGVLTAEYLLEEFRPDLIDMVLDKLRPENVRVAIVSKS 484
Query: 1496 FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILSLEKEA 1675
FEGKTDRTE+WYGTQYKQEAIP+++I+KWQNADLNGKFKLPTKNEFIPTNFEILSLEK+A
Sbjct: 485 FEGKTDRTEQWYGTQYKQEAIPEDIIQKWQNADLNGKFKLPTKNEFIPTNFEILSLEKDA 544
Query: 1676 TPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 1855
TPYP+LIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL
Sbjct: 545 TPYPALIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 604
Query: 1856 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE 2035
NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKI EKMATFEID+KRFEIIKE
Sbjct: 605 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKITEKMATFEIDKKRFEIIKE 664
Query: 2036 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 2215
AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH
Sbjct: 665 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 724
Query: 2216 IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 2395
IEALLHGNITKQAALG+MQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE
Sbjct: 725 IEALLHGNITKQAALGVMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 784
Query: 2396 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 2575
VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ
Sbjct: 785 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 844
Query: 2576 GLRFIIQSEKPPHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAEC 2755
GLRFIIQSEKPPHYLESRVEAFL+TMEK+IEDM EEAFQKHIQALAIRRLDKPKKLSAEC
Sbjct: 845 GLRFIIQSEKPPHYLESRVEAFLITMEKAIEDMTEEAFQKHIQALAIRRLDKPKKLSAEC 904
Query: 2756 AKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 2935
AKYWGEIISQQYN+DRDNIEVAYLKTLTK+DII+FY+EMLAVDAPRRHKVSVHVLAREMD
Sbjct: 905 AKYWGEIISQQYNYDRDNIEVAYLKTLTKDDIIRFYQEMLAVDAPRRHKVSVHVLAREMD 964
Query: 2936 SCPVVGEFPSQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 3100
SCPVVGEFPSQNDINLS+AP LPQPEVI NMTEFKRGLPLFPLVKPHINFMAAKL
Sbjct: 965 SCPVVGEFPSQNDINLSEAPPLPQPEVIHNMTEFKRGLPLFPLVKPHINFMAAKL 1019
>ref|NP_666262.2| nardilysin precursor [Mus musculus].
Length = 1161
Score = 523 bits (1348), Expect = e-148
Identities = 316/951 (33%), Positives = 510/951 (53%), Gaps = 23/951 (2%)
Frame = +2
Query: 287 TTDK-SSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNA 463
TT+K S+AAL V +GS +DP ++ GL+HF EHM+F+G+ KYP EN + FL +H GS NA
Sbjct: 217 TTEKQSAAALCVGVGSFADPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNA 276
Query: 464 FTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWR 643
T E T + FDV ++ + ALDR+AQFF+ PL DREV AVDSE++ +DA R
Sbjct: 277 STDCERTVFQFDVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANR 336
Query: 644 LFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLG 823
L + P HP KF GN TL+ P + ID L +F YYS++ M + V
Sbjct: 337 KEMLFGSLARPGHPMGKFFWGNAETLKHEPKKNNIDTHARLREFWMRYYSAHYMTLVVQS 396
Query: 824 RESLDDLTNLVVKLFSEVENKNV--XXXXXXXXXXXXXXXRQLYKIVPIKDIRNLYVTFP 997
+E+LD L V ++FS++ N + +LY++VPI+ I L +T+
Sbjct: 397 KETLDTLEKWVTEIFSQIPNNGLPKPNFSHLTDPFDTPAFNKLYRVVPIRKIHALTITWA 456
Query: 998 IPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGA----RGFMFFI 1165
+P Q++Y+ P HY+ L+GHEG GS+LS L+ K W L GG E + F
Sbjct: 457 LPPQQQHYRVKPLHYISWLVGHEGKGSILSYLRKKCWALALFGGNGETGFEQNSTYSVFS 516
Query: 1166 INVDLTEEGLLHVEDIILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRFKDKERPRGYT 1345
I++ LT+EG H ++ +FQY++ L+ GP++ VF+E + + F ++++ P Y
Sbjct: 517 ISITLTDEGYEHFYEVAHTVFQYLKMLQKLGPEKRVFEEIQKIEDNEFHYQEQTDPVEYV 576
Query: 1346 SKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEE 1525
+ + YP ++ LT + LL E++P++I L++L P+ + ++S + EG+ D E+
Sbjct: 577 ENMCENMQLYPRQDFLTGDQLLFEYKPEVIAEALNQLVPQKANLVLLSGANEGRCDLKEK 636
Query: 1526 WYGTQYKQEAIPDEVIKKWQ-NADLNGKFKLPTKNEFIPTNFEILSLEKEATPYPSLIKD 1702
W+GTQY E I + + W+ N DLN LP +N++I T+F + + + T YP+ I +
Sbjct: 637 WFGTQYSIEDIENSWTELWKSNFDLNPDLHLPAENKYIATDFTLKAFDCPETEYPAKIVN 696
Query: 1703 TAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAEL 1882
TA LW+K+D+KF +PKA + F SP + + +++ +L +L E AY A++
Sbjct: 697 TAQGCLWYKKDNKFKIPKAYIRFHLISPLIQKSAANVVLFDIFVNILTHNLAEPAYEADV 756
Query: 1883 AGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNF 2062
A L Y L +G+ + VKG+N K P+L + II+ + F F +I E ++ N
Sbjct: 757 AQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLTEFSSTPAVFTMITEQLKKTYFNI 816
Query: 2063 RAEQPHQHAMYYLRLLMTEVAWTK-DELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGN 2239
+P A L++ W+ D+ + +D ++L L F+ S+L +E L+ GN
Sbjct: 817 LI-KPETLAKDVRLLILEYSRWSMIDKYQALMDGLSLDSLLNFVKDFKSQLFVEGLVQGN 875
Query: 2240 ITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQR--NEVHNNCG 2413
+T ++ ++ V D L + PL V+++ V+LP G + + R N+ N
Sbjct: 876 VTSTESMDFLKYVVDKL----NFAPLEREMPVQFQVVELPS-GHHLCKVRALNKGDANSE 930
Query: 2414 IEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFII 2593
+ +YYQ+ +S E +EL + EPCF+ LRTK+ LGY V+ R +GI G +
Sbjct: 931 VTVYYQSGTRSLREYTLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTV 990
Query: 2594 QSEKPPHYLES---RVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKY 2764
++ + E+ ++E FL + E+ IE++ E+AF + AL + + L E +
Sbjct: 991 GTQATKYNSETVDKKIEEFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRN 1050
Query: 2765 WGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLA-----RE 2929
W E+++QQY FDR E+ LK+ +K D++ ++K A P +SVHV+ E
Sbjct: 1051 WNEVVTQQYLFDRLAHEIEALKSFSKSDLVSWFK---AHRGPGSKMLSVHVVGYGKYELE 1107
Query: 2930 MDSCPVVGEFPSQNDINLSQAPALP----QPEVIQNMTEFKRGLPLFPLVK 3070
D P + S+ + L+ P P I ++ F L LFP K
Sbjct: 1108 EDGAPFGEDSNSREGMQLTYLPPSPVLAESTTPITDIRAFTATLSLFPYHK 1158
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 94,263,117
Number of extensions: 2257782
Number of successful extensions: 6263
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 6250
Number of HSP's successfully gapped: 2
Length of query: 1078
Length of database: 15,617,559
Length adjustment: 112
Effective length of query: 966
Effective length of database: 12,253,527
Effective search space: 11836907082
Effective search space used: 11836907082
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0147_F05
(3235 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_001925416.3| PREDICTED: insulin-degrading enzyme isoform ... 2019 0.0
Alignment gi|XP_003359343.1| PREDICTED: insulin-degrading enzyme isoform ... 935 0.0
Alignment gi|XP_003128026.2| PREDICTED: nardilysin isoform 1 [Sus scrofa]. 511 e-144
Alignment gi|XP_003359347.1| PREDICTED: insulin-degrading enzyme-like [Su... 373 e-103
Alignment gi|XP_003361114.1| PREDICTED: mitochondrial-processing peptidas... 51 4e-06
Alignment gi|XP_003130289.1| PREDICTED: mitochondrial-processing peptidas... 50 8e-06
>ref|XP_001925416.3| PREDICTED: insulin-degrading enzyme isoform 1 [Sus scrofa].
Length = 1019
Score = 2019 bits (5231), Expect = 0.0
Identities = 998/1015 (98%), Positives = 998/1015 (98%)
Frame = +2
Query: 56 LAWLLHPALPSTFRSVLGARLPPLERLCGFQKKTYSKMNNSAIKRLGNHIIKSPEDKREY 235
LAWLLHPALPSTFRSVLGARLPPLERLCGFQKKTYSKMNNSAIKRLGNHIIKSPEDKREY
Sbjct: 5 LAWLLHPALPSTFRSVLGARLPPLERLCGFQKKTYSKMNNSAIKRLGNHIIKSPEDKREY 64
Query: 236 RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE 415
RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE
Sbjct: 65 RGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKE 124
Query: 416 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN 595
NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN
Sbjct: 125 NEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVN 184
Query: 596 AVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 775
AVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF
Sbjct: 185 AVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKF 244
Query: 776 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVXXXXXXXXXXXXXXXRQLYKI 955
HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNV RQLYKI
Sbjct: 245 HSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLRQLYKI 304
Query: 956 VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 1135
VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK
Sbjct: 305 VPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQK 364
Query: 1136 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRF 1315
EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLR EGPQEWVFQECKDLNAVAFRF
Sbjct: 365 EGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRF 424
Query: 1316 KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS 1495
KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS
Sbjct: 425 KDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKS 484
Query: 1496 FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILSLEKEA 1675
FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILSLEKEA
Sbjct: 485 FEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILSLEKEA 544
Query: 1676 TPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 1855
TPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL
Sbjct: 545 TPYPSLIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSL 604
Query: 1856 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE 2035
NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE
Sbjct: 605 NEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKE 664
Query: 2036 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 2215
AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH
Sbjct: 665 AYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLH 724
Query: 2216 IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 2395
IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE
Sbjct: 725 IEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNE 784
Query: 2396 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 2575
VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ
Sbjct: 785 VHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQ 844
Query: 2576 GLRFIIQSEKPPHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAEC 2755
GLRFIIQSEKPPHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAEC
Sbjct: 845 GLRFIIQSEKPPHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAEC 904
Query: 2756 AKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 2935
AKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD
Sbjct: 905 AKYWGEIISQQYNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMD 964
Query: 2936 SCPVVGEFPSQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 3100
SCPVVGEFP QNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL
Sbjct: 965 SCPVVGEFPCQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 1019
>ref|XP_003359343.1| PREDICTED: insulin-degrading enzyme isoform 2 [Sus scrofa].
Length = 464
Score = 935 bits (2417), Expect = 0.0
Identities = 463/464 (99%), Positives = 463/464 (99%)
Frame = +2
Query: 1709 MSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAG 1888
MSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAG
Sbjct: 1 MSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAG 60
Query: 1889 LSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRA 2068
LSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRA
Sbjct: 61 LSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRA 120
Query: 2069 EQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITK 2248
EQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITK
Sbjct: 121 EQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITK 180
Query: 2249 QAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYY 2428
QAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYY
Sbjct: 181 QAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYY 240
Query: 2429 QTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKP 2608
QTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKP
Sbjct: 241 QTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKP 300
Query: 2609 PHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQ 2788
PHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQ
Sbjct: 301 PHYLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQ 360
Query: 2789 YNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPSQ 2968
YNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFP Q
Sbjct: 361 YNFDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPCQ 420
Query: 2969 NDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 3100
NDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL
Sbjct: 421 NDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL 464
>ref|XP_003128026.2| PREDICTED: nardilysin isoform 1 [Sus scrofa].
Length = 937
Score = 511 bits (1315), Expect = e-144
Identities = 296/922 (32%), Positives = 493/922 (53%), Gaps = 15/922 (1%)
Frame = +2
Query: 311 LDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNY 490
+D+ + DP ++ GL+HF EHM+F+G+ KYP EN + FL +H GS NA T E T +
Sbjct: 1 MDLESTWVKDPDDLPGLAHFLEHMVFMGSLKYPDENGFDAFLKKHGGSDNASTDCERTVF 60
Query: 491 YFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATG 670
FDV ++ + ALDR+AQFF+ PL DREV AVDSE++ +DA R L +
Sbjct: 61 QFDVQRKYFKEALDRWAQFFIHPLMIRDAIDREVEAVDSEYQLARPSDANRKEMLFGSLA 120
Query: 671 NPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLGRESLDDLTN 850
P HP KF GN TL+ P + ID L +F +YS++ M + V +E+LD L
Sbjct: 121 RPGHPMGKFFWGNAETLKHEPKRNNIDTHARLREFWMRFYSAHYMTLVVQSKETLDTLEK 180
Query: 851 LVVKLFSEVENKNV--XXXXXXXXXXXXXXXRQLYKIVPIKDIRNLYVTFPIPDLQKYYK 1024
V ++FS++ N + +LY++VPI+ I L +T+ +P Q++Y+
Sbjct: 181 WVTEIFSQIPNNGLPKPNFGHLTDPFDTPAFNKLYRVVPIRKIHALTITWALPPQQQHYR 240
Query: 1025 SNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGA----RGFMFFIINVDLTEEG 1192
S P HY+ L+GHEG GS+LS L+ K W L GG E + F I++ LT+EG
Sbjct: 241 SKPLHYISWLVGHEGKGSILSYLRKKCWALALFGGNGETGFEQNSTYSVFSISITLTDEG 300
Query: 1193 LLHVEDIILHMFQYIQKLRTEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHY 1372
H ++ +FQY++ L+ GP++ +F+E + + F ++++ P Y + +
Sbjct: 301 YEHFYEVAHTVFQYLKMLQKLGPEKRIFEEIQKIEDNEFHYQEQTDPVEYVENMCENMQL 360
Query: 1373 YPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQE 1552
YPL++ LT + LL E++P++I L++L P+ + ++S + EGK D E+W+GTQY E
Sbjct: 361 YPLQDFLTGDQLLFEYKPEVIAEALNQLVPQKANLVLLSGANEGKCDLKEKWFGTQYSME 420
Query: 1553 AIPDEVIKKWQ-NADLNGKFKLPTKNEFIPTNFEILSLEKEATPYPSLIKDTAMSKLWFK 1729
I + + W+ N +LN LP +N++I T+F + + + T YP I +T LW+K
Sbjct: 421 DIENSWAELWKSNFELNPDLHLPAENKYIATDFMLKAFDCPETEYPVKIVNTPQGCLWYK 480
Query: 1730 QDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQN 1909
+D+KF +PKA + F SP + + +++ +L +L E AY A++A L Y L
Sbjct: 481 KDNKFKIPKAYIRFHLISPLIQKSAANVVLFDIFVNILTHNLAEPAYEADVAQLEYKLVA 540
Query: 1910 TIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHA 2089
+G+ + VKG+N K P+L + II+ +A F F +I E ++ N +P A
Sbjct: 541 GEHGLIIRVKGFNHKLPLLFQLIIDYLAEFTSTPAVFTMITEQLKKTYFNILI-KPETLA 599
Query: 2090 MYYLRLLMTEVAWTK-DELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGI 2266
L++ W+ D+ + +D ++L L +F+ + ++L +E L+ GN+T +
Sbjct: 600 KDVRLLILEYARWSMIDKYRALMDGLSLESLLSFVKEFKAQLFVEGLVQGNVTSTESTDF 659
Query: 2267 MQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFV-YQQRNEVHNNCGIEIYYQTDMQ 2443
++ V D L + PL V++R V+LP + N+ N + +YYQ+ +
Sbjct: 660 LKYVVDKL----NFMPLEQEMPVQFRVVELPGAHHLCKVRALNKGDANSEVTVYYQSGAR 715
Query: 2444 STSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPH--- 2614
S E +EL + EPCF+ LRTK+ LGY V+ R +GI G + ++ +
Sbjct: 716 SLKEYTLMELLVMHMEEPCFDFLRTKQTLGYHVYPTCRNTSGILGFSVTVGTQATKYNSE 775
Query: 2615 YLESRVEAFLVTMEKSIEDMAEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYN 2794
++ ++E FL + E+ IE++ E+AF + AL + + L E + W E+++QQY
Sbjct: 776 VVDKKIEEFLSSFEEKIENLTEDAFNTQVTALIKLKECEDTHLGEEVDRNWNEVVTQQYL 835
Query: 2795 FDRDNIEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLA---REMDSCPVVGEFPS 2965
FDR E+ LK+ +K D++ ++K A P +SVHV+ E++ + S
Sbjct: 836 FDRLAHEIEALKSFSKSDLVSWFK---AHRGPGSKMLSVHVVGFGKHELEEDGIPSSEDS 892
Query: 2966 QNDINLSQAPALPQPEVIQNMT 3031
+ + Q LP ++ + T
Sbjct: 893 NSSCEVMQLTYLPASPLLADST 914
>ref|XP_003359347.1| PREDICTED: insulin-degrading enzyme-like [Sus scrofa].
Length = 284
Score = 373 bits (957), Expect = e-103
Identities = 179/179 (100%), Positives = 179/179 (100%)
Frame = +2
Query: 167 MNNSAIKRLGNHIIKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPP 346
MNNSAIKRLGNHIIKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPP
Sbjct: 1 MNNSAIKRLGNHIIKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPP 60
Query: 347 NIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGA 526
NIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGA
Sbjct: 61 NIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGA 120
Query: 527 LDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGT 703
LDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGT
Sbjct: 121 LDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPNHPFSKFGT 179
>ref|XP_003361114.1| PREDICTED: mitochondrial-processing peptidase subunit beta-like
[Sus scrofa].
Length = 573
Score = 51.2 bits (121), Expect = 4e-06
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 7/250 (2%)
Frame = +2
Query: 125 LERLCGFQKKTYSKMNNSAIKRLGNHIIKSPE-------DKREYRGLELANGIKVLLISD 283
L+RL GF K+ G + ++S + + E R L NG++V D
Sbjct: 99 LQRLWGFSKRLLVGGPARQSLYFGGNRLRSTQAATQVFLNVPETRVTCLENGLRVAS-ED 157
Query: 284 PTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNA 463
+ L + GS + G +HF EHM F GTKK + + + NA
Sbjct: 158 SGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKK-RSQLDLELEIENMGAHLNA 216
Query: 464 FTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWR 643
+TS E T YY + L A++ A E+ +RE + E ++ N
Sbjct: 217 YTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILREMQEVETNLQEV 276
Query: 644 LFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSTYYSSNLMAICVLG 823
+F AT N + L N + I+ R++L+ + +T+Y + + G
Sbjct: 277 VFDYLHATAYQNTAL------GRTILGPTENIKSIN-RKDLVDYITTHYKGPRIVLAAAG 329
Query: 824 RESLDDLTNL 853
S D+L L
Sbjct: 330 GVSHDELLEL 339
>ref|XP_003130289.1| PREDICTED: mitochondrial-processing peptidase subunit beta [Sus
scrofa].
Length = 489
Score = 50.1 bits (118), Expect = 8e-06
Identities = 51/202 (25%), Positives = 82/202 (40%)
Frame = +2
Query: 248 LANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYS 427
L NG++V D + L + GS + G +HF EHM F GTKK + +
Sbjct: 63 LENGLRVAS-EDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKK-RSQLDLE 120
Query: 428 QFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDS 607
+ NA+TS E T YY + L A++ A E+ +RE +
Sbjct: 121 LEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERGVILR 180
Query: 608 EHEKNVMNDAWRLFQLEKATGNPNHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSTY 787
E ++ N +F AT N + L N + I+ R++L+ + +T+
Sbjct: 181 EMQEVETNLQEVVFDYLHATAYQNTAL------GRTILGPTENIKSIN-RKDLVDYITTH 233
Query: 788 YSSNLMAICVLGRESLDDLTNL 853
Y + + G S D+L L
Sbjct: 234 YKGPRIVLAAAGGVSHDELLEL 255
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 68,659,373
Number of extensions: 1634807
Number of successful extensions: 4545
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 4530
Number of HSP's successfully gapped: 6
Length of query: 1078
Length of database: 11,343,932
Length adjustment: 109
Effective length of query: 969
Effective length of database: 8,630,159
Effective search space: 8362624071
Effective search space used: 8362624071
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= LVRM1_0147_F05
(3235 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 543 e-151
>Sscrofa_Chr14
|| Length = 153851969
Score = 543 bits (274), Expect = e-151
Identities = 274/274 (100%)
Strand = Plus / Minus
Query: 2531 ggctatatcgtcttcagcgggccacgccgagccaacggcatccagggcttacggttcatc 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113515538 ggctatatcgtcttcagcgggccacgccgagccaacggcatccagggcttacggttcatc 113515479
Query: 2591 atccagtcggaaaagccacctcactacctagagagcagagtggaagctttcttagttacc 2650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113515478 atccagtcggaaaagccacctcactacctagagagcagagtggaagctttcttagttacc 113515419
Query: 2651 atggaaaagtccatagaggacatggcagaagaggcctttcaaaaacacattcaagcccta 2710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113515418 atggaaaagtccatagaggacatggcagaagaggcctttcaaaaacacattcaagcccta 113515359
Query: 2711 gcaattcgtcgactagacaaaccaaagaaactgtccgcagagtgtgctaaatactggggg 2770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113515358 gcaattcgtcgactagacaaaccaaagaaactgtccgcagagtgtgctaaatactggggg 113515299
Query: 2771 gaaatcatctcccagcaatacaactttgacagag 2804
||||||||||||||||||||||||||||||||||
Sbjct: 113515298 gaaatcatctcccagcaatacaactttgacagag 113515265
Score = 420 bits (212), Expect = e-114
Identities = 212/212 (100%)
Strand = Plus / Minus
Query: 325 aggttccttgtcagatcctccaaatattgctggcttgagtcatttttgtgaacatatgct 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113581169 aggttccttgtcagatcctccaaatattgctggcttgagtcatttttgtgaacatatgct 113581110
Query: 385 atttttgggaacaaagaaataccctaaggaaaatgaatacagccagtttctcagtgagca 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113581109 atttttgggaacaaagaaataccctaaggaaaatgaatacagccagtttctcagtgagca 113581050
Query: 445 tgcaggaagttcaaatgcctttactagtggagagcataccaattactattttgatgtttc 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113581049 tgcaggaagttcaaatgcctttactagtggagagcataccaattactattttgatgtttc 113580990
Query: 505 ccatgaacacctagaaggtgccctagacaggt 536
||||||||||||||||||||||||||||||||
Sbjct: 113580989 ccatgaacacctagaaggtgccctagacaggt 113580958
Score = 416 bits (210), Expect = e-113
Identities = 210/210 (100%)
Strand = Plus / Minus
Query: 3008 cctgaagtgattcagaacatgaccgagttcaagcgtggtttgccactgtttccccttgtg 3067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113509013 cctgaagtgattcagaacatgaccgagttcaagcgtggtttgccactgtttccccttgtg 113508954
Query: 3068 aaaccacatattaacttcatggctgcaaaactctgaagattcccacggacgggaaagtgc 3127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113508953 aaaccacatattaacttcatggctgcaaaactctgaagattcccacggacgggaaagtgc 113508894
Query: 3128 aagtggatgcattcctgagtcttccaagggctaggaaaaccgtcttgtccactttaatag 3187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113508893 aagtggatgcattcctgagtcttccaagggctaggaaaaccgtcttgtccactttaatag 113508834
Query: 3188 tttctcattaactattagagagacaaacag 3217
||||||||||||||||||||||||||||||
Sbjct: 113508833 tttctcattaactattagagagacaaacag 113508804
Score = 347 bits (175), Expect = 2e-92
Identities = 175/175 (100%)
Strand = Plus / Minus
Query: 154 gacttacagcaaaatgaataattcagctatcaagaggctgggaaatcatatcatcaaatc 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113583581 gacttacagcaaaatgaataattcagctatcaagaggctgggaaatcatatcatcaaatc 113583522
Query: 214 tcctgaagataaacgagaataccgtgggctagagctggccaatgggatcaaagtacttct 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113583521 tcctgaagataaacgagaataccgtgggctagagctggccaatgggatcaaagtacttct 113583462
Query: 274 catcagtgatcccaccacagataaatcatcagcagcacttgatgtacacataggt 328
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113583461 catcagtgatcccaccacagataaatcatcagcagcacttgatgtacacataggt 113583407
Score = 345 bits (174), Expect = 9e-92
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 533 aggtttgcacagttttttctatgtcccctatttgatgagagttgcaaagacagagaagtg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113577478 aggtttgcacagttttttctatgtcccctatttgatgagagttgcaaagacagagaagtg 113577419
Query: 593 aatgcagttgattcagaacatgagaagaatgtgatgaatgatgcctggagactctttcag 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113577418 aatgcagttgattcagaacatgagaagaatgtgatgaatgatgcctggagactctttcag 113577359
Query: 653 ttggaaaaggctacagggaatcccaatcaccccttcagcaaatttggaacaggt 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113577358 ttggaaaaggctacagggaatcccaatcaccccttcagcaaatttggaacaggt 113577305
Score = 335 bits (169), Expect = 9e-89
Identities = 169/169 (100%)
Strand = Plus / Minus
Query: 2364 gaggctggtttgtttatcagcagaggaatgaagttcacaataactgtggcatcgagatat 2423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113517239 gaggctggtttgtttatcagcagaggaatgaagttcacaataactgtggcatcgagatat 113517180
Query: 2424 actaccagacagacatgcagagcacctccgagaatatgttcctggagctcttctgtcaga 2483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113517179 actaccagacagacatgcagagcacctccgagaatatgttcctggagctcttctgtcaga 113517120
Query: 2484 tcatctccgagccttgcttcaacaccctgcgcaccaaggagcagctggg 2532
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113517119 tcatctccgagccttgcttcaacaccctgcgcaccaaggagcagctggg 113517071
Score = 325 bits (164), Expect = 9e-86
Identities = 164/164 (100%)
Strand = Plus / Minus
Query: 941 caactttacaaaatagtacccattaaggatattaggaatctttatgtgacatttcccata 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113554941 caactttacaaaatagtacccattaaggatattaggaatctttatgtgacatttcccata 113554882
Query: 1001 cctgaccttcagaaatactacaaatcaaatcctggtcattatcttggtcatctcattggg 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113554881 cctgaccttcagaaatactacaaatcaaatcctggtcattatcttggtcatctcattggg 113554822
Query: 1061 catgaaggccctgggagtctgttatcagaacttaaatcaaaggg 1104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113554821 catgaaggccctgggagtctgttatcagaacttaaatcaaaggg 113554778
Score = 293 bits (148), Expect = 3e-76
Identities = 148/148 (100%)
Strand = Plus / Minus
Query: 1780 cagcccatttgcttatgtggaccccttgcactgtaacatggcctatttgtaccttgagct 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113529984 cagcccatttgcttatgtggaccccttgcactgtaacatggcctatttgtaccttgagct 113529925
Query: 1840 cctcaaagactcactcaacgagtatgcatatgcagcagagctagcaggcttgagctatga 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113529924 cctcaaagactcactcaacgagtatgcatatgcagcagagctagcaggcttgagctatga 113529865
Query: 1900 cctccaaaataccatctatgggatgtat 1927
||||||||||||||||||||||||||||
Sbjct: 113529864 cctccaaaataccatctatgggatgtat 113529837
Score = 280 bits (141), Expect = 5e-72
Identities = 141/141 (100%)
Strand = Plus / Minus
Query: 1 aagaaggaagcgttcgcggtgatcccggcggctgcgctggggtatgcggtaccggctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113619259 aagaaggaagcgttcgcggtgatcccggcggctgcgctggggtatgcggtaccggctagc 113619200
Query: 61 gtggctgctgcaccccgcgctgcccagcaccttccgctccgtcctcggcgcacgcctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113619199 gtggctgctgcaccccgcgctgcccagcaccttccgctccgtcctcggcgcacgcctgcc 113619140
Query: 121 gcccctggagcgcctctgtgg 141
|||||||||||||||||||||
Sbjct: 113619139 gcccctggagcgcctctgtgg 113619119
Score = 280 bits (141), Expect = 5e-72
Identities = 141/141 (100%)
Strand = Plus / Minus
Query: 1 aagaaggaagcgttcgcggtgatcccggcggctgcgctggggtatgcggtaccggctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113706122 aagaaggaagcgttcgcggtgatcccggcggctgcgctggggtatgcggtaccggctagc 113706063
Query: 61 gtggctgctgcaccccgcgctgcccagcaccttccgctccgtcctcggcgcacgcctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113706062 gtggctgctgcaccccgcgctgcccagcaccttccgctccgtcctcggcgcacgcctgcc 113706003
Query: 121 gcccctggagcgcctctgtgg 141
|||||||||||||||||||||
Sbjct: 113706002 gcccctggagcgcctctgtgg 113705982
Score = 254 bits (128), Expect = 3e-64
Identities = 131/132 (99%)
Strand = Plus / Minus
Query: 1569 tcattaagaaatggcaaaatgctgacctgaatgggaaatttaaacttccaacgaagaatg 1628
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113535365 tcattcagaaatggcaaaatgctgacctgaatgggaaatttaaacttccaacgaagaatg 113535306
Query: 1629 aatttattcctacaaattttgagattttgtcattagaaaaagaagcaacaccataccctt 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113535305 aatttattcctacaaattttgagattttgtcattagaaaaagaagcaacaccataccctt 113535246
Query: 1689 ctcttattaagg 1700
||||||||||||
Sbjct: 113535245 ctcttattaagg 113535234
Score = 250 bits (126), Expect = 4e-63
Identities = 126/126 (100%)
Strand = Plus / Minus
Query: 702 caggtaataaatatactctagagactagaccaaaccaagaaggcattgatgtaagacaag 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113558908 caggtaataaatatactctagagactagaccaaaccaagaaggcattgatgtaagacaag 113558849
Query: 762 agctgctgaaattccattctacttattattcatccaacttgatggctatttgtgttttgg 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113558848 agctgctgaaattccattctacttattattcatccaacttgatggctatttgtgttttgg 113558789
Query: 822 gtcgag 827
||||||
Sbjct: 113558788 gtcgag 113558783
Score = 240 bits (121), Expect = 4e-60
Identities = 121/121 (100%)
Strand = Plus / Minus
Query: 2039 tacatgagatcgcttaacaatttccgagctgagcagcctcaccagcacgccatgtactac 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113525725 tacatgagatcgcttaacaatttccgagctgagcagcctcaccagcacgccatgtactac 113525666
Query: 2099 ctccgcctgctgatgacagaagtggcctggactaaagatgaattaaaagaagccctggat 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113525665 ctccgcctgctgatgacagaagtggcctggactaaagatgaattaaaagaagccctggat 113525606
Query: 2159 g 2159
|
Sbjct: 113525605 g 113525605
Score = 230 bits (116), Expect = 4e-57
Identities = 116/116 (100%)
Strand = Plus / Minus
Query: 2249 caggccgcattaggaattatgcagatggttgaagacacccttattgaacatgcccatacg 2308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113520721 caggccgcattaggaattatgcagatggttgaagacacccttattgaacatgcccatacg 113520662
Query: 2309 aaaccgctccttccaagtcagctggttcggtatagagaagttcagctccctgatag 2364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113520661 aaaccgctccttccaagtcagctggttcggtatagagaagttcagctccctgatag 113520606
Score = 228 bits (115), Expect = 2e-56
Identities = 115/115 (100%)
Strand = Plus / Minus
Query: 826 agaatctttagacgacttgactaatctggtcgtaaagttattttctgaagtagagaacaa 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113555545 agaatctttagacgacttgactaatctggtcgtaaagttattttctgaagtagagaacaa 113555486
Query: 886 aaatgtcccattgccagaatttcctgaacatcctttccaagaagaacatcttaga 940
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113555485 aaatgtcccattgccagaatttcctgaacatcctttccaagaagaacatcttaga 113555431
Score = 222 bits (112), Expect = 9e-55
Identities = 115/116 (99%)
Strand = Plus / Minus
Query: 1923 tgtatctctcggtgaaaggttacaatgacaagcagccaattttgctaaagaagattattg 1982
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113527360 tgtagctctcggtgaaaggttacaatgacaagcagccaattttgctaaagaagattattg 113527301
Query: 1983 agaaaatggctacctttgagattgatgaaaaaagatttgaaattatcaaagaagca 2038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113527300 agaaaatggctacctttgagattgatgaaaaaagatttgaaattatcaaagaagca 113527245
Score = 208 bits (105), Expect = 1e-50
Identities = 105/105 (100%)
Strand = Plus / Minus
Query: 1370 tactatcccctagaagaagtgctcacagctgaatatttactggaagaatttagacctgat 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113550678 tactatcccctagaagaagtgctcacagctgaatatttactggaagaatttagacctgat 113550619
Query: 1430 ttaatagagatggttctcgataaactcagaccagaaaatgttcgg 1474
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113550618 ttaatagagatggttctcgataaactcagaccagaaaatgttcgg 113550574
Score = 206 bits (104), Expect = 6e-50
Identities = 104/104 (100%)
Strand = Plus / Minus
Query: 1473 gggttgcaatagtttctaaatcttttgaaggaaaaactgatcgcacagaagagtggtacg 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113537626 gggttgcaatagtttctaaatcttttgaaggaaaaactgatcgcacagaagagtggtacg 113537567
Query: 1533 gaacccagtacaaacaagaagctataccagacgaagtcattaag 1576
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113537566 gaacccagtacaaacaagaagctataccagacgaagtcattaag 113537523
Score = 186 bits (94), Expect = 5e-44
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 2159 gatgtcacccttcctcgccttaaggccttcatacctcagctcctgtcaaggctgcacatc 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113521798 gatgtcacccttcctcgccttaaggccttcatacctcagctcctgtcaaggctgcacatc 113521739
Query: 2219 gaagcccttctccatggaaacataacaaagcagg 2252
||||||||||||||||||||||||||||||||||
Sbjct: 113521738 gaagcccttctccatggaaacataacaaagcagg 113521705
Score = 186 bits (94), Expect = 5e-44
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 1103 ggctgggtaaatactcttgttggtgggcaaaaggaaggagcccgaggttttatgtttttt 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113554088 ggctgggtaaatactcttgttggtgggcaaaaggaaggagcccgaggttttatgtttttt 113554029
Query: 1163 atcattaatgtggacctgactgaggaaggattgt 1196
||||||||||||||||||||||||||||||||||
Sbjct: 113554028 atcattaatgtggacctgactgaggaaggattgt 113553995
Score = 176 bits (89), Expect = 5e-41
Identities = 92/93 (98%)
Strand = Plus / Minus
Query: 1197 tacatgttgaagatataattttgcacatgtttcaatatattcagaagttacgtacagaag 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 113553556 tacatgttgaagatataattttgcacatgtttcaatatattcagaagttacgtgcagaag 113553497
Query: 1257 gacctcaagaatgggttttccaagagtgcaagg 1289
|||||||||||||||||||||||||||||||||
Sbjct: 113553496 gacctcaagaatgggttttccaagagtgcaagg 113553464
Score = 168 bits (85), Expect = 1e-38
Identities = 85/85 (100%)
Strand = Plus / Minus
Query: 1698 aggatacggctatgagcaaactctggttcaaacaagatgataagtttttcttgcccaagg 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113533104 aggatacggctatgagcaaactctggttcaaacaagatgataagtttttcttgcccaagg 113533045
Query: 1758 cctgtctcaactttgagtttttcag 1782
|||||||||||||||||||||||||
Sbjct: 113533044 cctgtctcaactttgagtttttcag 113533020
Score = 165 bits (83), Expect = 2e-37
Identities = 83/83 (100%)
Strand = Plus / Minus
Query: 1287 aggacttgaatgctgttgcttttaggtttaaagacaaagagaggccacgaggttatacct 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113552256 aggacttgaatgctgttgcttttaggtttaaagacaaagagaggccacgaggttatacct 113552197
Query: 1347 ctaagattgcaggaatattgcat 1369
|||||||||||||||||||||||
Sbjct: 113552196 ctaagattgcaggaatattgcat 113552174
Score = 153 bits (77), Expect = 7e-34
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 2865 aggaaatgttggcagtggatgccccgaggagacataaggtgtctgtccatgttcttgcta 2924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113510672 aggaaatgttggcagtggatgccccgaggagacataaggtgtctgtccatgttcttgcta 113510613
Query: 2925 gagaaatggattcttgt 2941
|||||||||||||||||
Sbjct: 113510612 gagaaatggattcttgt 113510596
Score = 129 bits (65), Expect = 1e-26
Identities = 65/65 (100%)
Strand = Plus / Minus
Query: 2803 agataatatagaagttgcatatttaaagacacttaccaaggaagatattatcaaattcta 2862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113514046 agataatatagaagttgcatatttaaagacacttaccaaggaagatattatcaaattcta 113513987
Query: 2863 taagg 2867
|||||
Sbjct: 113513986 taagg 113513982
Score = 127 bits (64), Expect = 4e-26
Identities = 67/68 (98%)
Strand = Plus / Minus
Query: 2940 gtcccgtggttggagagttcccaagtcaaaatgatataaatttgtcacaagcaccagcct 2999
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 113509887 gtcccgtggttggagagttcccatgtcaaaatgatataaatttgtcacaagcaccagcct 113509828
Query: 3000 tgccgcaa 3007
||||||||
Sbjct: 113509827 tgccgcaa 113509820
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 103,279,516
Number of extensions: 181
Number of successful extensions: 181
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 181
Number of HSP's successfully gapped: 26
Length of query: 3235
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 3213
Effective length of database: 2,808,408,574
Effective search space: 9023416748262
Effective search space used: 9023416748262
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 19 (38.2 bits)
S2: 30 (60.0 bits)