Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0053_F06
         (2870 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_002691025.1| PREDICTED: retinol dehydrogenase 11-like [Bo...   541   e-154
Alignment   gi|XP_582373.4| PREDICTED: retinol dehydrogenase 11 isoform 1 [...   541   e-154
Alignment   gi|NP_899207.1| retinol dehydrogenase 12 [Bos taurus].               416   e-116
Alignment   gi|NP_001068813.1| retinol dehydrogenase 13 [Bos taurus].            255   2e-67
Alignment   gi|NP_001069155.1| dehydrogenase/reductase SDR family member 13...   236   8e-62
Alignment   gi|NP_001068701.1| retinol dehydrogenase 14 [Bos taurus].            228   3e-59
Alignment   gi|NP_001071560.1| WW domain-containing oxidoreductase [Bos tau...   181   2e-45
Alignment   gi|NP_001095361.1| hypothetical protein LOC507942 [Bos taurus].      173   9e-43
Alignment   gi|XP_591168.4| PREDICTED: dehydrogenase/reductase (SDR family)...   133   1e-30
Alignment   gi|NP_001093783.1| dehydrogenase/reductase SDR family member 12...   113   1e-24

>ref|XP_002691025.1| PREDICTED: retinol dehydrogenase 11-like [Bos taurus].
          Length = 338

 Score =  541 bits (1393), Expect(2) = e-154
 Identities = 269/327 (82%), Positives = 286/327 (87%)
 Frame = +2

Query: 161  MIGVXXXXXXXXXXXYIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELA 340
            M+GV           YIA PQIRKMLSSGVCTST+QLPGKVAVVTGAN GIGKETAKELA
Sbjct: 1    MVGVLLLLLLLPFLLYIAAPQIRKMLSSGVCTSTIQLPGKVAVVTGANAGIGKETAKELA 60

Query: 341  KRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLH 520
            +RGARVYLACRDVQ GE VAREIQ MTGNQQVLVRKLDLADTKSIRAFAK FL EEKHLH
Sbjct: 61   RRGARVYLACRDVQNGELVAREIQMMTGNQQVLVRKLDLADTKSIRAFAKRFLEEEKHLH 120

Query: 521  ILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHM 700
            ILINNAGVMMCPYSKTADGFE HMGVN               +ESAPSRVVNVSSLAH +
Sbjct: 121  ILINNAGVMMCPYSKTADGFEMHMGVNHLGHFLLTHLLLEKLEESAPSRVVNVSSLAHLL 180

Query: 701  GRIHFHNLRGEKFYHAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRH 880
            GRIHFHNL+GEKFY +GLAYC+SKLAN+LFTQELARRLKGSGVT YSVHPGTV+SELVRH
Sbjct: 181  GRIHFHNLQGEKFYQSGLAYCHSKLANILFTQELARRLKGSGVTVYSVHPGTVNSELVRH 240

Query: 881  SSLLRWIWWLFSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVA 1060
            S+L+RWIWW+FSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVA
Sbjct: 241  SALMRWIWWIFSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVA 300

Query: 1061 RRLWDVSCDLLGIPMD*RVMAVGPREA 1141
            RRLWDVSCDLLGIP+D  +MA GP+ +
Sbjct: 301  RRLWDVSCDLLGIPVDWLMMAAGPKRS 327



 Score = 25.0 bits (53), Expect(2) = e-154
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +1

Query: 1132 KRSLQHTTQYSLPK 1173
            KRSL+ TTQ++LPK
Sbjct: 325  KRSLKQTTQHTLPK 338


>ref|XP_582373.4| PREDICTED: retinol dehydrogenase 11 isoform 1 [Bos taurus].
          Length = 338

 Score =  541 bits (1393), Expect(2) = e-154
 Identities = 269/327 (82%), Positives = 286/327 (87%)
 Frame = +2

Query: 161  MIGVXXXXXXXXXXXYIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELA 340
            M+GV           YIA PQIRKMLSSGVCTST+QLPGKVAVVTGAN GIGKETAKELA
Sbjct: 1    MVGVLLLLLLLPFLLYIAAPQIRKMLSSGVCTSTIQLPGKVAVVTGANAGIGKETAKELA 60

Query: 341  KRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLH 520
            +RGARVYLACRDVQ GE VAREIQ MTGNQQVLVRKLDLADTKSIRAFAK FL EEKHLH
Sbjct: 61   RRGARVYLACRDVQNGELVAREIQMMTGNQQVLVRKLDLADTKSIRAFAKRFLEEEKHLH 120

Query: 521  ILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHM 700
            ILINNAGVMMCPYSKTADGFE HMGVN               +ESAPSRVVNVSSLAH +
Sbjct: 121  ILINNAGVMMCPYSKTADGFEMHMGVNHLGHFLLTHLLLEKLEESAPSRVVNVSSLAHLL 180

Query: 701  GRIHFHNLRGEKFYHAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRH 880
            GRIHFHNL+GEKFY +GLAYC+SKLAN+LFTQELARRLKGSGVT YSVHPGTV+SELVRH
Sbjct: 181  GRIHFHNLQGEKFYQSGLAYCHSKLANILFTQELARRLKGSGVTVYSVHPGTVNSELVRH 240

Query: 881  SSLLRWIWWLFSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVA 1060
            S+L+RWIWW+FSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVA
Sbjct: 241  SALMRWIWWIFSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVA 300

Query: 1061 RRLWDVSCDLLGIPMD*RVMAVGPREA 1141
            RRLWDVSCDLLGIP+D  +MA GP+ +
Sbjct: 301  RRLWDVSCDLLGIPVDWLMMAAGPKRS 327



 Score = 25.0 bits (53), Expect(2) = e-154
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +1

Query: 1132 KRSLQHTTQYSLPK 1173
            KRSL+ TTQ++LPK
Sbjct: 325  KRSLKQTTQHTLPK 338


>ref|NP_899207.1| retinol dehydrogenase 12 [Bos taurus].
          Length = 316

 Score =  416 bits (1068), Expect = e-116
 Identities = 206/298 (69%), Positives = 241/298 (80%)
 Frame = +2

Query: 206  YIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQK 385
            Y+  P IRK  + GVC + VQL GKV V+TGANTGIGKETA+ELA+RGARVY+ACRDV K
Sbjct: 16   YVIAPSIRKFFAGGVCRTDVQLFGKVVVITGANTGIGKETARELARRGARVYIACRDVLK 75

Query: 386  GESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSK 565
            GES A EIQ  T N QVLVRKLDL+DTKSIRAFA+GFLAEEK LHILINNAGVM+CPYSK
Sbjct: 76   GESAASEIQADTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSK 135

Query: 566  TADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYH 745
            TADGFETH+ VN               KESAP+RVVN+SS+AHH+G+I FH+L+G+K+Y+
Sbjct: 136  TADGFETHLAVNHLGHFLLTHLLLGRLKESAPARVVNLSSVAHHLGKIRFHDLQGDKYYN 195

Query: 746  AGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFI 925
             G AYC+SKLANVLFT+ELA+RLKG+GVTTY+VHPG V S+LVRHS LL  +W LFS F+
Sbjct: 196  LGFAYCHSKLANVLFTRELAKRLKGTGVTTYAVHPGIVRSKLVRHSFLLCLLWRLFSPFL 255

Query: 926  KTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            KT  +GAQTSL+CAL EGLE LSG +FSDC   WVS +ARN   A RLW+VSC+LLGI
Sbjct: 256  KTTWEGAQTSLHCALAEGLEPLSGKYFSDCKKTWVSPRARNNKTAERLWNVSCELLGI 313


>ref|NP_001068813.1| retinol dehydrogenase 13 [Bos taurus].
          Length = 335

 Score =  255 bits (651), Expect = 2e-67
 Identities = 143/304 (47%), Positives = 188/304 (61%), Gaps = 10/304 (3%)
 Frame = +2

Query: 224  IRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAR 403
            ++  ++ G C S   +PGK  +VTGANTGIGK+TA ELAKRG  + LACRD++K E+ A+
Sbjct: 21   LKDFVAGGACPSKATIPGKTVIVTGANTGIGKQTALELAKRGGNIILACRDMEKCEAAAK 80

Query: 404  EIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFE 583
            EI+  T N +V  R LDLA  KSIR FA     EE+H+HILINNA VM CP+  T DGFE
Sbjct: 81   EIRGETLNHRVNARHLDLASLKSIREFAAKVTEEEEHVHILINNAAVMRCPHWTTEDGFE 140

Query: 584  THMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEK-FYHAGLAY 760
              +GVN               K SAPSR++NVSSLAH  G I F +L  EK  Y    AY
Sbjct: 141  MQLGVNYLGHFLLTNLLLDKLKASAPSRIINVSSLAHVAGHIDFEDLNWEKRKYDTKAAY 200

Query: 761  CNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSL---------LRWIWWLF 913
            C SKLA V+ T+EL+RRL+G+GVT  ++HPG   +EL RH+ +         L  I+WL 
Sbjct: 201  CQSKLAVVVSTKELSRRLQGTGVTVNALHPGVARTELGRHTGMHSSAFSSFTLGPIFWL- 259

Query: 914  SFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLL 1093
               +K+P+  AQ S+Y A+ E LE +SG +F        + +A +E VA+RLW  S  L+
Sbjct: 260  --LVKSPELAAQPSVYLAVAEELEGVSGKYFDVLKEKPPAPEAEDEEVAKRLWAESVRLV 317

Query: 1094 GIPM 1105
            G+ M
Sbjct: 318  GLEM 321


>ref|NP_001069155.1| dehydrogenase/reductase SDR family member 13 precursor [Bos taurus].
          Length = 377

 Score =  236 bits (602), Expect = 8e-62
 Identities = 139/291 (47%), Positives = 179/291 (61%), Gaps = 8/291 (2%)
 Frame = +2

Query: 251  CTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQ 430
            C     L G+ AVVTGAN+GIGK TA ELA+RGARV LACR  ++GE+ A +++  +GN 
Sbjct: 28   CRGLASLRGRTAVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNN 87

Query: 431  QVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXX 610
            +V+   LDLA   S+RAFA  FL+ E  L ILI+NAG+  C   +T + F   + VN   
Sbjct: 88   EVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSC--GRTREPFNLLLRVNHIG 145

Query: 611  XXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGE--KFYHAGLAYCNSKLANV 784
                        K SAPSRVV VSS AH  GR+ F  L      +     AY NSKLANV
Sbjct: 146  PFLLTHLLLPRLKTSAPSRVVVVSSAAHRRGRLDFTRLDHPVVGWQQELRAYANSKLANV 205

Query: 785  LFTQELARRLKGSGVTTYSVHPGTVDSEL-VRH-----SSLLRWIWWLFSFFIKTPQQGA 946
            LF +ELA +L+G+GVT Y+ HPG V+SEL +RH       LLR + WL    ++ P+ GA
Sbjct: 206  LFARELATQLEGTGVTCYAAHPGPVNSELFLRHVPGWLRPLLRPLAWL---VLRAPRGGA 262

Query: 947  QTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            QT LYCAL EG+E LSG +F++CHV  V   AR++  A RLW+ S  L G+
Sbjct: 263  QTPLYCALQEGIEPLSGRYFANCHVEEVPPAARDDRAAHRLWEASRKLAGL 313


>ref|NP_001068701.1| retinol dehydrogenase 14 [Bos taurus].
          Length = 336

 Score =  228 bits (580), Expect = 3e-59
 Identities = 124/292 (42%), Positives = 176/292 (60%), Gaps = 17/292 (5%)
 Frame = +2

Query: 275  GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQ-------------N 415
            GK  ++TGAN+G+G+ TA EL + GARV + CRD ++ E  A +++             N
Sbjct: 43   GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRERAEEAAGQLRREVCPAGGPDSGPN 102

Query: 416  MTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMG 595
              G  +++V++LDLA   S+R+F +  L EE  L +LINNAGV  CPY KT DGFE   G
Sbjct: 103  SGGAGELVVKELDLASLSSVRSFCQEMLQEEPRLDVLINNAGVFQCPYMKTEDGFEMQFG 162

Query: 596  VNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKL 775
            VN               K SAPSR+V VSS  +  G I+F +L  E+ Y+    Y  SKL
Sbjct: 163  VNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFCYSRSKL 222

Query: 776  ANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSF----FIKTPQQG 943
            AN+LFT+ELARRL+G+ VT   +HPG V + L RH  +   +  LF+     F KTP++G
Sbjct: 223  ANILFTRELARRLEGTSVTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPEEG 282

Query: 944  AQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            AQT++Y A +  +E +SG +F DC    +  +A +E+VAR+LWD+S  ++GI
Sbjct: 283  AQTAVYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGI 334


>ref|NP_001071560.1| WW domain-containing oxidoreductase [Bos taurus].
          Length = 414

 Score =  181 bits (460), Expect = 2e-45
 Identities = 121/294 (41%), Positives = 160/294 (54%), Gaps = 16/294 (5%)
 Frame = +2

Query: 269  LPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRK 448
            L GKV VVTGAN+GIG ETAK  A  GA V LACR++ +       I       +V    
Sbjct: 122  LSGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMTRANEAVSRILGEWHKAKVEAMT 181

Query: 449  LDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXX 628
            LDLA  +S++ FA+ F A+   LH+L+ NA V   P++ T DG ET   VN         
Sbjct: 182  LDLALLRSVQHFAQAFKAKNVSLHVLVCNAAVFGLPWTLTKDGLETTFQVNHLGHFYLVQ 241

Query: 629  XXXXXXKESAPSRVVNVSSLAHHM-------GRIHFHNLRGEK-FYHAGLAYCNSKLANV 784
                    SAP+RVV VSS +H         G++ F  L   K  Y A LAY  SKL N+
Sbjct: 242  LLQDVLCRSAPARVVVVSSESHRFTDINDSSGKLDFSRLSPSKNDYWAMLAYNRSKLCNI 301

Query: 785  LFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSF-------FIKTPQQG 943
            LF+ EL RRL   GVT+ +VHPG      + +S+L R  WW+++        F K+ QQG
Sbjct: 302  LFSNELHRRLSPRGVTSNAVHPGN-----MMYSALHRG-WWVYTLLFTLARPFTKSMQQG 355

Query: 944  AQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLL-GIP 1102
            A T++YCA+   LE L G +F+ C     SA+A++E  AR LW +S  LL G+P
Sbjct: 356  AATTVYCAVAPELEGLGGMYFNSCCRCLPSAEAQSEDSARALWALSERLLQGVP 409


>ref|NP_001095361.1| hypothetical protein LOC507942 [Bos taurus].
          Length = 330

 Score =  173 bits (438), Expect = 9e-43
 Identities = 108/283 (38%), Positives = 159/283 (56%), Gaps = 3/283 (1%)
 Frame = +2

Query: 260  TVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVL 439
            +  L GK AVVTGAN+GIGK  ++ELA RGARV LACR  ++G+    EIQ  + + ++L
Sbjct: 44   STDLTGKTAVVTGANSGIGKAVSQELAHRGARVILACRSRERGQQALAEIQATSKSNRLL 103

Query: 440  VRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXX 619
            + ++DL+   SIR+FA+  L E   +H+L+NNA V   P + T +G +     N      
Sbjct: 104  LGEVDLSSMASIRSFAQRLLQECPEIHLLVNNAAVCGFPTTLTPEGLDLTFATNYTGPFL 163

Query: 620  XXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGE-KFYHAGLAYCNSKLANVLFTQ 796
                     + +  +RVVNVSS     G I   +L G  +       Y  SKL    FT 
Sbjct: 164  LTNLLQGALQRAGSARVVNVSSFRQSHGYIDEDHLIGAGRPLTFNQNYDCSKLLLASFTG 223

Query: 797  ELARRLKGSGVTTYSVHPGTVDSELVRHSS-LLRWIWWLFSFFIKTPQQGAQTSLYCALT 973
            +LA+RL+G+ VT  SV PG V +++++H S   R+++WL SFF K  +QGA   LY +L 
Sbjct: 224  KLAQRLQGTVVTVNSVDPGVVYTKIMKHFSWSYRFLFWLLSFFFKDSKQGAVPVLYLSLA 283

Query: 974  EGLEVLSGNHF-SDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            + L+ +SG HF S C +      A++  VA+ LW+ S  L  +
Sbjct: 284  KELDGISGKHFSSSCVITLPPEAAQDPHVAQSLWNTSVRLTNL 326


>ref|XP_591168.4| PREDICTED: dehydrogenase/reductase (SDR family) X-linked [Bos
            taurus].
          Length = 237

 Score =  133 bits (334), Expect = 1e-30
 Identities = 87/223 (39%), Positives = 118/223 (52%), Gaps = 12/223 (5%)
 Frame = +2

Query: 467  KSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXXXXXXX 646
            +SIR F + F  ++  LH+L+NNAGVMM P   T DGFE H GVN               
Sbjct: 2    RSIREFVQTFKMKKLPLHVLVNNAGVMMVPQRTTEDGFEEHFGVNYLGHFLLTNLLLDTL 61

Query: 647  KES-AP---SRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLFTQELARRL 814
            +ES AP   +RVV VSS  H++G ++  +L+   +Y A  AY  SKLA VLFT  L   L
Sbjct: 62   QESGAPGHSARVVTVSSATHYVGELNLDDLQSSTYYSAHAAYAQSKLALVLFTYHLQALL 121

Query: 815  KGSG--VTTYSVHPGTVDSELVRH----SSLLRWI--WWLFSFFIKTPQQGAQTSLYCAL 970
               G  VT     PG VD++L R+    + L++ +  WW+F    KTP +GA TS+Y A+
Sbjct: 122  TAQGMPVTASVADPGVVDTDLYRYVFWGTRLVKKLLGWWVF----KTPDEGAWTSVYAAV 177

Query: 971  TEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            T  LE L G +  +           +  + R+LW  SC L GI
Sbjct: 178  TPALEGLGGRYLYNEKETRSLEATYDPELQRQLWARSCQLTGI 220


>ref|NP_001093783.1| dehydrogenase/reductase SDR family member 12 [Bos taurus].
          Length = 317

 Score =  113 bits (282), Expect = 1e-24
 Identities = 82/252 (32%), Positives = 123/252 (48%), Gaps = 2/252 (0%)
 Frame = +2

Query: 263  VQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLV 442
            VQ+PG+  +VTG N+GIGK TA E+AKRG  V+L CRD  + E    EI   +GNQ + +
Sbjct: 36   VQVPGRAFMVTGGNSGIGKATAMEIAKRGGTVHLVCRDHSRAEGAKAEIIRESGNQNIFL 95

Query: 443  RKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXX 622
              +DL+  KS+  F + F  +E  L++LINNAG M+     T DG E +   N       
Sbjct: 96   HIVDLSLPKSVWKFVENF-KQEHTLNVLINNAGCMVNKRELTEDGLEKNFATNTLGVYVL 154

Query: 623  XXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAG-LAYCNSKLANVLFTQE 799
                    ++    RV+ VSS    + +++  + + E+    G + Y  +K   V+ T+ 
Sbjct: 155  TTALIPVLEKEHDPRVITVSSGGMLVQKLNTDDPQSERTAFDGTMVYAQNKRQQVVLTER 214

Query: 800  LARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFIKTPQQGAQTSLYCALTEG 979
             AR      +    +HPG VD+  VR S  +          +++  QGA T L+ AL   
Sbjct: 215  WAR--AHPAIHFSCMHPGWVDTPGVRLS--MPGFHARLGARLRSEAQGADTVLWLALAPA 270

Query: 980  LEVL-SGNHFSD 1012
                 SG  F D
Sbjct: 271  ATAQPSGCFFQD 282


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 97,329,975
Number of extensions: 2592171
Number of successful extensions: 6091
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 6044
Number of HSP's successfully gapped: 28
Length of query: 956
Length of database: 17,681,374
Length adjustment: 112
Effective length of query: 844
Effective length of database: 13,975,518
Effective search space: 11795337192
Effective search space used: 11795337192
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0053_F06
         (2870 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_057110.3| retinol dehydrogenase 11 [Homo sapiens].             534   e-151
Alignment   gi|NP_689656.2| retinol dehydrogenase 12 [Homo sapiens].             417   e-116
Alignment   gi|NP_001139443.1| retinol dehydrogenase 13 isoform 1 [Homo sap...   249   1e-65
Alignment   gi|NP_065956.1| retinol dehydrogenase 14 [Homo sapiens].             228   3e-59
Alignment   gi|NP_653284.2| dehydrogenase/reductase SDR family member 13 pr...   227   4e-59
Alignment   gi|NP_612421.1| retinol dehydrogenase 13 isoform 2 [Homo sapien...   188   3e-47
Alignment   gi|NP_057457.1| WW domain-containing oxidoreductase isoform 1 [...   177   6e-44
Alignment   gi|NP_660160.2| dehydrogenase/reductase SDR family member on ch...   169   1e-41
Alignment   gi|NP_001186032.1| NT5C1B-RDH14 protein isoform 1 [Homo sapiens].    169   2e-41
Alignment   gi|NP_078981.1| dehydrogenase/reductase SDR family member 12 is...    69   2e-11

>ref|NP_057110.3| retinol dehydrogenase 11 [Homo sapiens].
          Length = 318

 Score =  534 bits (1375), Expect = e-151
 Identities = 258/301 (85%), Positives = 278/301 (92%)
 Frame = +2

Query: 206  YIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQK 385
            Y+A PQIRKMLSSGVCTSTVQLPGKV VVTGANTGIGKETAKELA+RGARVYLACRDV+K
Sbjct: 18   YMAAPQIRKMLSSGVCTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEK 77

Query: 386  GESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSK 565
            GE VA+EIQ  TGNQQVLVRKLDL+DTKSIRAFAKGFLAEEKHLH+LINNAGVMMCPYSK
Sbjct: 78   GELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSK 137

Query: 566  TADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYH 745
            TADGFE H+GVN               KESAPSR+VNVSSLAHH+GRIHFHNL+GEKFY+
Sbjct: 138  TADGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIVNVSSLAHHLGRIHFHNLQGEKFYN 197

Query: 746  AGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFI 925
            AGLAYC+SKLAN+LFTQELARRLKGSGVTTYSVHPGTV SELVRHSS +RW+WWLFSFFI
Sbjct: 198  AGLAYCHSKLANILFTQELARRLKGSGVTTYSVHPGTVQSELVRHSSFMRWMWWLFSFFI 257

Query: 926  KTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGIPM 1105
            KTPQQGAQTSL+CALTEGLE+LSGNHFSDCHVAWVSAQARNET+ARRLWDVSCDLLG+P+
Sbjct: 258  KTPQQGAQTSLHCALTEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLLGLPI 317

Query: 1106 D 1108
            D
Sbjct: 318  D 318


>ref|NP_689656.2| retinol dehydrogenase 12 [Homo sapiens].
          Length = 316

 Score =  417 bits (1073), Expect = e-116
 Identities = 209/298 (70%), Positives = 240/298 (80%)
 Frame = +2

Query: 206  YIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQK 385
            Y+  P IRK  + GVC + VQLPGKV V+TGANTGIGKETA+ELA RGARVY+ACRDV K
Sbjct: 16   YMVAPSIRKFFAGGVCRTNVQLPGKVVVITGANTGIGKETARELASRGARVYIACRDVLK 75

Query: 386  GESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSK 565
            GES A EI+  T N QVLVRKLDL+DTKSIRAFA+GFLAEEK LHILINNAGVMMCPYSK
Sbjct: 76   GESAASEIRVDTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSK 135

Query: 566  TADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYH 745
            TADGFETH+GVN               K SAP+RVVNVSS+AHH+G+I FH+L+ EK Y 
Sbjct: 136  TADGFETHLGVNHLGHFLLTYLLLERLKVSAPARVVNVSSVAHHIGKIPFHDLQSEKRYS 195

Query: 746  AGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFI 925
             G AYC+SKLANVLFT+ELA+RL+G+GVTTY+VHPG V SELVRHSSLL  +W LFS F+
Sbjct: 196  RGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGVVRSELVRHSSLLCLLWRLFSPFV 255

Query: 926  KTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            KT ++GAQTSL+CAL EGLE LSG +FSDC   WVS +ARN   A RLW+VSC+LLGI
Sbjct: 256  KTAREGAQTSLHCALAEGLEPLSGKYFSDCKRTWVSPRARNNKTAERLWNVSCELLGI 313


>ref|NP_001139443.1| retinol dehydrogenase 13 isoform 1 [Homo sapiens].
          Length = 331

 Score =  249 bits (636), Expect = 1e-65
 Identities = 140/302 (46%), Positives = 185/302 (61%), Gaps = 10/302 (3%)
 Frame = +2

Query: 224  IRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAR 403
            ++  ++ G C S   +PGK  +VTGANTGIGK+TA ELA+RG  + LACRD++K E+ A+
Sbjct: 21   LKDYVTGGACPSKATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAK 80

Query: 404  EIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFE 583
            +I+  T N  V  R LDLA  KSIR FA   + EE+ + ILINNAGVM CP+  T DGFE
Sbjct: 81   DIRGETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWTTEDGFE 140

Query: 584  THMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGE-KFYHAGLAY 760
               GVN               K SAPSR++N+SSLAH  G I F +L  + + Y+   AY
Sbjct: 141  MQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWQTRKYNTKAAY 200

Query: 761  CNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRH---------SSLLRWIWWLF 913
            C SKLA VLFT+EL+RRL+GSGVT  ++HPG   +EL RH         S+ L  I+WL 
Sbjct: 201  CQSKLAIVLFTKELSRRLQGSGVTVNALHPGVARTELGRHTGIHGSTFSSTTLGPIFWL- 259

Query: 914  SFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLL 1093
               +K+P+  AQ S Y A+ E L  +SG +F        + +A +E VARRLW  S  L+
Sbjct: 260  --LVKSPELAAQPSTYLAVAEELADVSGKYFDGLKQKAPAPEAEDEEVARRLWAESARLV 317

Query: 1094 GI 1099
            G+
Sbjct: 318  GL 319


>ref|NP_065956.1| retinol dehydrogenase 14 [Homo sapiens].
          Length = 336

 Score =  228 bits (580), Expect = 3e-59
 Identities = 124/292 (42%), Positives = 176/292 (60%), Gaps = 17/292 (5%)
 Frame = +2

Query: 275  GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQN------------- 415
            GK  ++TGAN+G+G+ TA EL + GARV + CRD  + E  A +++              
Sbjct: 43   GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPG 102

Query: 416  MTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMG 595
            ++G  +++VR+LDLA  +S+RAF +  L EE  L +LINNAG+  CPY KT DGFE   G
Sbjct: 103  VSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFG 162

Query: 596  VNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKL 775
            VN               K SAPSR+V VSS  +  G I+F +L  E+ Y+    Y  SKL
Sbjct: 163  VNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFDDLNSEQSYNKSFCYSRSKL 222

Query: 776  ANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSF----FIKTPQQG 943
            AN+LFT+ELARRL+G+ VT   +HPG V + L RH  +   +  LF+     F KTP +G
Sbjct: 223  ANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVSWAFFKTPVEG 282

Query: 944  AQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            AQTS+Y A +  +E +SG +F DC    +  +A +E+VAR+LWD+S  ++G+
Sbjct: 283  AQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGL 334


>ref|NP_653284.2| dehydrogenase/reductase SDR family member 13 precursor [Homo
            sapiens].
          Length = 377

 Score =  227 bits (579), Expect = 4e-59
 Identities = 136/291 (46%), Positives = 179/291 (61%), Gaps = 8/291 (2%)
 Frame = +2

Query: 251  CTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQ 430
            C     L G+ AVVTGAN+GIGK TA ELA+RGARV LACR  ++GE+ A +++  +GN 
Sbjct: 28   CGGMGNLRGRTAVVTGANSGIGKMTALELARRGARVVLACRSQERGEAAAFDLRQESGNN 87

Query: 431  QVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXX 610
            +V+   LDLA   S+RAFA  FL+ E  L ILI+NAG+  C   +T + F   + VN   
Sbjct: 88   EVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSC--GRTREAFNLLLRVNHIG 145

Query: 611  XXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNL-RGEKFYHAGL-AYCNSKLANV 784
                        K  APSRVV V+S AH  GR+ F  L R    +   L AY ++KLANV
Sbjct: 146  PFLLTHLLLPCLKACAPSRVVVVASAAHCRGRLDFKRLDRPVVGWRQELRAYADTKLANV 205

Query: 785  LFTQELARRLKGSGVTTYSVHPGTVDSEL-VRH-----SSLLRWIWWLFSFFIKTPQQGA 946
            LF +ELA +L+ +GVT Y+ HPG V+SEL +RH       LLR + WL    ++ P+ GA
Sbjct: 206  LFARELANQLEATGVTCYAAHPGPVNSELFLRHVPGWLRPLLRPLAWL---VLRAPRGGA 262

Query: 947  QTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            QT LYCAL EG+E LSG +F++CHV  V   AR++  A RLW+ S  L G+
Sbjct: 263  QTPLYCALQEGIEPLSGRYFANCHVEEVPPAARDDRAAHRLWEASKRLAGL 313


>ref|NP_612421.1| retinol dehydrogenase 13 isoform 2 [Homo sapiens].
          Length = 260

 Score =  188 bits (477), Expect = 3e-47
 Identities = 112/251 (44%), Positives = 148/251 (58%), Gaps = 10/251 (3%)
 Frame = +2

Query: 377  VQKGESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCP 556
            ++K E+ A++I+  T N  V  R LDLA  KSIR FA   + EE+ + ILINNAGVM CP
Sbjct: 1    MEKCEAAAKDIRGETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCP 60

Query: 557  YSKTADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGE- 733
            +  T DGFE   GVN               K SAPSR++N+SSLAH  G I F +L  + 
Sbjct: 61   HWTTEDGFEMQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWQT 120

Query: 734  KFYHAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRH---------SS 886
            + Y+   AYC SKLA VLFT+EL+RRL+GSGVT  ++HPG   +EL RH         S+
Sbjct: 121  RKYNTKAAYCQSKLAIVLFTKELSRRLQGSGVTVNALHPGVARTELGRHTGIHGSTFSST 180

Query: 887  LLRWIWWLFSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARR 1066
             L  I+WL    +K+P+  AQ S Y A+ E L  +SG +F        + +A +E VARR
Sbjct: 181  TLGPIFWL---LVKSPELAAQPSTYLAVAEELADVSGKYFDGLKQKAPAPEAEDEEVARR 237

Query: 1067 LWDVSCDLLGI 1099
            LW  S  L+G+
Sbjct: 238  LWAESARLVGL 248


>ref|NP_057457.1| WW domain-containing oxidoreductase isoform 1 [Homo sapiens].
          Length = 414

 Score =  177 bits (448), Expect = 6e-44
 Identities = 112/284 (39%), Positives = 150/284 (52%), Gaps = 15/284 (5%)
 Frame = +2

Query: 275  GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLD 454
            GKV VVTGAN+GIG ETAK  A  GA V LACR++ +       I       +V    LD
Sbjct: 124  GKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKAKVEAMTLD 183

Query: 455  LADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXXX 634
            LA  +S++ FA+ F A+   LH+L+ NA     P+S T DG ET   VN           
Sbjct: 184  LALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLETTFQVNHLGHFYLVQLL 243

Query: 635  XXXXKESAPSRVVNVSSLAHH-------MGRIHFHNLRGEK-FYHAGLAYCNSKLANVLF 790
                  SAP+RV+ VSS +H        +G++ F  L   K  Y A LAY  SKL N+LF
Sbjct: 244  QDVLCRSAPARVIVVSSESHRFTDINDSLGKLDFSRLSPTKNDYWAMLAYNRSKLCNILF 303

Query: 791  TQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSF-------FIKTPQQGAQ 949
            + EL RRL   GVT+ +VHPG +    +  S      WW+++        F K+ QQGA 
Sbjct: 304  SNELHRRLSPRGVTSNAVHPGNMMYSNIHRS------WWVYTLLFTLARPFTKSMQQGAA 357

Query: 950  TSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVS 1081
            T++YCA    LE L G +F++C     S +A++E  AR LW +S
Sbjct: 358  TTVYCAAVPELEGLGGMYFNNCCRCMPSPEAQSEETARTLWALS 401


>ref|NP_660160.2| dehydrogenase/reductase SDR family member on chromosome X precursor
            [Homo sapiens].
          Length = 330

 Score =  169 bits (429), Expect = 1e-41
 Identities = 108/290 (37%), Positives = 150/290 (51%), Gaps = 14/290 (4%)
 Frame = +2

Query: 272  PGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKL 451
            P +VA+VTG   GIG  TAK LA+ G  V +A  +  K + V  +I+  T N +V     
Sbjct: 42   PDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYC 101

Query: 452  DLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXX 631
            DLA   SIR F + F  ++  LH+LINNAGVMM P  KT DGFE H G+N          
Sbjct: 102  DLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNL 161

Query: 632  XXXXXKESA----PSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLFTQE 799
                 KES      +RVV VSS  H++  ++  +L+    Y    AY  SKLA VLFT  
Sbjct: 162  LLDTLKESGSPGHSARVVTVSSATHYVAELNMDDLQSSACYSPHAAYAQSKLALVLFTYH 221

Query: 800  LARRL--KGSGVTTYSVHPGTVDSELVRH--------SSLLRWIWWLFSFFIKTPQQGAQ 949
            L R L  +GS VT   V PG V++++ +H          LL W+        KTP +GA 
Sbjct: 222  LQRLLAAEGSHVTANVVDPGVVNTDVYKHVFWATRLAKKLLGWL------LFKTPDEGAW 275

Query: 950  TSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            TS+Y A+T  LE + G++  +           N+ + ++LW  SC++ G+
Sbjct: 276  TSIYAAVTPELEGVGGHYLYNEKETKSLHVTYNQKLQQQLWSKSCEMTGV 325


>ref|NP_001186032.1| NT5C1B-RDH14 protein isoform 1 [Homo sapiens].
          Length = 650

 Score =  169 bits (427), Expect = 2e-41
 Identities = 92/209 (44%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
 Frame = +2

Query: 485  AKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXXXXXXXKESAPS 664
            +K    EE  L +LINNAG+  CPY KT DGFE   GVN               K SAPS
Sbjct: 440  SKPLAQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSAPS 499

Query: 665  RVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLFTQELARRLKGSGVTTYSV 844
            R+V VSS  +  G I+F +L  E+ Y+    Y  SKLAN+LFT+ELARRL+G+ VT   +
Sbjct: 500  RIVVVSSKLYKYGDINFDDLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVL 559

Query: 845  HPGTVDSELVRHSSLLRWIWWLFSF----FIKTPQQGAQTSLYCALTEGLEVLSGNHFSD 1012
            HPG V + L RH  +   +  LF+     F KTP +GAQTS+Y A +  +E +SG +F D
Sbjct: 560  HPGIVRTNLGRHIHIPLLVKPLFNLVSWAFFKTPVEGAQTSIYLASSPEVEGVSGRYFGD 619

Query: 1013 CHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            C    +  +A +E+VAR+LWD+S  ++G+
Sbjct: 620  CKEEELLPKAMDESVARKLWDISEVMVGL 648


>ref|NP_078981.1| dehydrogenase/reductase SDR family member 12 isoform 2 [Homo
            sapiens].
          Length = 242

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
 Frame = +2

Query: 377  VQKGESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCP 556
            +++  ++A+++   + ++ + +  +DL+D K I  F + F  E K LH+LINNAG M+  
Sbjct: 25   LEETAALAKQLPLKSPSENIFLHIVDLSDPKQIWKFVENFKQEHK-LHVLINNAGCMVNK 83

Query: 557  YSKTADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEK 736
               T DG E +   N               ++    RV+ VSS    + +++ ++L+ E+
Sbjct: 84   RELTEDGLEKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSER 143

Query: 737  F-YHAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLF 913
              +   + Y  +K   V+ T+  A+      +   S+HPG  D+  VR +  +      F
Sbjct: 144  TPFDGTMVYAQNKRQQVVLTERWAQ--GHPAIHFSSMHPGWADTPGVRQA--MPGFHARF 199

Query: 914  SFFIKTPQQGAQTSLYCALTEGLEVLSGNHF 1006
               +++  QGA T L+ AL+          F
Sbjct: 200  GDRLRSEAQGADTMLWLALSSAAAAQPSGRF 230


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 99,120,006
Number of extensions: 2489939
Number of successful extensions: 6333
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 6293
Number of HSP's successfully gapped: 26
Length of query: 956
Length of database: 18,297,164
Length adjustment: 112
Effective length of query: 844
Effective length of database: 14,605,196
Effective search space: 12326785424
Effective search space used: 12326785424
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA OVRM1_0053_F06

Animal-Genome cDNA OVRM1_0053_F06


Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0053_F06
         (2870 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_067532.2| retinol dehydrogenase 11 [Mus musculus].             490   e-138
Alignment   gi|NP_084293.1| retinol dehydrogenase 12 [Mus musculus].             392   e-109
Alignment   gi|NP_780581.1| retinol dehydrogenase 13 [Mus musculus].             250   4e-66
Alignment   gi|NP_076186.1| retinol dehydrogenase 14 [Mus musculus].             227   3e-59
Alignment   gi|NP_899109.2| dehydrogenase/reductase SDR family member 13 pr...   227   4e-59
Alignment   gi|NP_062519.2| WW domain-containing oxidoreductase [Mus muscul...   175   2e-43
Alignment   gi|NP_001028498.2| dehydrogenase/reductase SDR family member on...   172   2e-42
Alignment   gi|NP_079798.2| dehydrogenase/reductase SDR family member 7 pre...    69   2e-11
Alignment   gi|NP_671755.2| retinol dehydrogenase similar protein 2 [Mus mu...    62   2e-09
Alignment   gi|NP_780721.1| dehydrogenase/reductase SDR family member 9 pre...    60   9e-09

>ref|NP_067532.2| retinol dehydrogenase 11 [Mus musculus].
          Length = 316

 Score =  490 bits (1261), Expect = e-138
 Identities = 237/301 (78%), Positives = 263/301 (87%)
 Frame = +2

Query: 206  YIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQK 385
            Y+  P+IRKMLSSGVCTS VQLPGKVA+VTGANTGIGKETAK+LA+RGARVYLACRDV K
Sbjct: 15   YLVTPKIRKMLSSGVCTSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDK 74

Query: 386  GESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSK 565
            GE  AREIQ +TGN QV VRKLDLADTKSIRAFAK FLAEEKHLH+LINNAGVMMCPYSK
Sbjct: 75   GELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSK 134

Query: 566  TADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYH 745
            TADGFE H+GVN               KESAPSR+VN+SSL HH+GRIHFHNL+GEKFY 
Sbjct: 135  TADGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIVNLSSLGHHLGRIHFHNLQGEKFYS 194

Query: 746  AGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFI 925
            AGLAYC+SKLAN+LFT+ELA+RLKGSGVTTYSVHPGTV SEL R+SS++RW+W LF  FI
Sbjct: 195  AGLAYCHSKLANILFTKELAKRLKGSGVTTYSVHPGTVHSELTRYSSIMRWLWQLFFVFI 254

Query: 926  KTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGIPM 1105
            KTPQ+GAQTSLYCALTEGLE LSG+HFSDC +AWVS Q RNE +ARRLWDVSCDLLG+P+
Sbjct: 255  KTPQEGAQTSLYCALTEGLESLSGSHFSDCQLAWVSYQGRNEIIARRLWDVSCDLLGLPV 314

Query: 1106 D 1108
            D
Sbjct: 315  D 315


>ref|NP_084293.1| retinol dehydrogenase 12 [Mus musculus].
          Length = 316

 Score =  392 bits (1008), Expect = e-109
 Identities = 197/298 (66%), Positives = 235/298 (78%)
 Frame = +2

Query: 206  YIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQK 385
            Y+  P IRK  + GVCT+ VQ+PGKV V+TGANTGIGKETA+ELA+RGARVY+ACRDV K
Sbjct: 16   YLTAPSIRKFFAGGVCTTNVQIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLK 75

Query: 386  GESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSK 565
            GES A EI+  T N QVLVRKLDL+DTKSIRAFA+ FLAEEK LHILINNAGVMMCPYSK
Sbjct: 76   GESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSK 135

Query: 566  TADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYH 745
            T DGFETH GVN               KESAP+RVVN+SS+AH +G+I FH+L+G+K Y 
Sbjct: 136  TTDGFETHFGVNHLGHFLLTYLLLERLKESAPARVVNLSSIAHLIGKIRFHDLQGQKRYC 195

Query: 746  AGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFI 925
            +  AY +SKLAN+LFT+ELA+RL+G+GVT Y+VHPG V SE+ R+S LL  +W LFS F 
Sbjct: 196  SAFAYGHSKLANLLFTRELAKRLQGTGVTAYAVHPGVVLSEITRNSYLLCLLWRLFSPFF 255

Query: 926  KTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            K+  QGAQTSL+CAL E LE LSG +FSDC   WVS++ARN+  A RLW+VSC+LLGI
Sbjct: 256  KSTSQGAQTSLHCALAEDLEPLSGKYFSDCKRMWVSSRARNKKTAERLWNVSCELLGI 313


>ref|NP_780581.1| retinol dehydrogenase 13 [Mus musculus].
          Length = 334

 Score =  250 bits (639), Expect = 4e-66
 Identities = 141/305 (46%), Positives = 183/305 (60%), Gaps = 11/305 (3%)
 Frame = +2

Query: 224  IRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAR 403
            ++  ++ G C S   +PGK  +VTGANTGIGK+TA ELAKRG  V LACRD++K E  A+
Sbjct: 21   LKDYVAGGACPSKATIPGKTVIVTGANTGIGKQTALELAKRGGNVILACRDMEKCEVAAK 80

Query: 404  EIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFE 583
            +I+  T N +V   +LDLA  KSIR FA+  + EE+ + IL+NNA VM CP+  T DGFE
Sbjct: 81   DIRGETLNPRVRAERLDLASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTEDGFE 140

Query: 584  THMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGE-KFYHAGLAY 760
               GVN               K SAPSR++N+SSLAH  G I F +L  + K Y    AY
Sbjct: 141  MQFGVNYLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQMKKYDTKAAY 200

Query: 761  CNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLR----------WIWWL 910
            C SKLA VLFT+EL+ RL+GSGVT  ++HPG   +EL RH+ +            + W L
Sbjct: 201  CQSKLAVVLFTKELSHRLQGSGVTVNALHPGVARTELGRHTGMHNSAFSGFMLGPFFWLL 260

Query: 911  FSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDL 1090
            F    K+PQ  AQ S Y A+ E LE +SG +F        S +A +E VARRLW  S  L
Sbjct: 261  F----KSPQLAAQPSTYLAVAEELENVSGKYFDGLREKAPSPEAEDEEVARRLWTESARL 316

Query: 1091 LGIPM 1105
            +G+ M
Sbjct: 317  VGLAM 321


>ref|NP_076186.1| retinol dehydrogenase 14 [Mus musculus].
          Length = 334

 Score =  227 bits (579), Expect = 3e-59
 Identities = 127/289 (43%), Positives = 177/289 (61%), Gaps = 14/289 (4%)
 Frame = +2

Query: 275  GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMT----------G 424
            GK  ++TGAN+G+G+ TA EL + GARV + CRD  + E  A +++              
Sbjct: 44   GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGT 103

Query: 425  NQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNX 604
            + Q++V++LDLA  +S+RAF +  L EE  L +LINNAGV  CPY+KT DGFE   GVN 
Sbjct: 104  DGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVNH 163

Query: 605  XXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANV 784
                          K SAPSR+V VSS  +  G I+F +L  E+ Y+    Y  SKLAN+
Sbjct: 164  LGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGEINFEDLNSEQSYNKSFCYSRSKLANI 223

Query: 785  LFTQELARRLKGSGVTTYSVHPGTVDSELVRH---SSLLRWIWWLFSF-FIKTPQQGAQT 952
            LFT+ELARRL+G+ VT   +HPG V + L RH     L R ++ L S+ F KTP +GAQT
Sbjct: 224  LFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVSWAFFKTPLEGAQT 283

Query: 953  SLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            S+Y A +  +E +SG +F DC    +  +A +E+VAR+LWD+S  ++GI
Sbjct: 284  SIYLACSPDVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGI 332


>ref|NP_899109.2| dehydrogenase/reductase SDR family member 13 precursor [Mus
            musculus].
          Length = 376

 Score =  227 bits (578), Expect = 4e-59
 Identities = 133/291 (45%), Positives = 178/291 (61%), Gaps = 8/291 (2%)
 Frame = +2

Query: 251  CTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQ 430
            C     L G+  VVTGAN+GIGK TA ELA+RGARV LACR  ++GE+ A +++  +GN 
Sbjct: 28   CGGIGSLRGRTVVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNN 87

Query: 431  QVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXX 610
            +V+   LDLA   S++AFA  FL+ E  L +LI+NAG+  C   +T + F   + VN   
Sbjct: 88   EVIFMALDLASLASVQAFATAFLSSEPRLDVLIHNAGISSC--GRTRETFNLLLRVNHVG 145

Query: 611  XXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGE--KFYHAGLAYCNSKLANV 784
                        +  APSRVV VSS AH  GR+ F  L      +     AY +SKLANV
Sbjct: 146  PFLLTHLLLPRLRSCAPSRVVIVSSAAHRRGRLDFTRLDCPVVGWQQELRAYADSKLANV 205

Query: 785  LFTQELARRLKGSGVTTYSVHPGTVDSEL-VRH-----SSLLRWIWWLFSFFIKTPQQGA 946
            LF +ELA +L+G+GVT Y+ HPG V+SEL +RH       +LR + WL    ++ PQ GA
Sbjct: 206  LFARELATQLEGTGVTCYAAHPGPVNSELFLRHLPGWLRPILRPLAWL---VLRAPQGGA 262

Query: 947  QTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            QT LYCAL EG+E LSG +F++CHV  VS  AR++  A+RLW  +  L G+
Sbjct: 263  QTPLYCALQEGIEPLSGRYFANCHVEEVSPAARDDQAAQRLWKATKKLAGL 313


>ref|NP_062519.2| WW domain-containing oxidoreductase [Mus musculus].
          Length = 414

 Score =  175 bits (444), Expect = 2e-43
 Identities = 113/289 (39%), Positives = 157/289 (54%), Gaps = 13/289 (4%)
 Frame = +2

Query: 275  GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLD 454
            GKV +VTGAN+GIG ETAK  A  GA V LACR++ +       I       +V    LD
Sbjct: 124  GKVVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVSRILEEWHKAKVEAMTLD 183

Query: 455  LADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXXX 634
            LA  +S++ FA+ F A+   LH+L+ NAG    P+  T DG ET   VN           
Sbjct: 184  LAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLETTFQVNHLGHFYLVQLL 243

Query: 635  XXXXKESAPSRVVNVSSLAHHM-------GRIHFHNLRGEKF-YHAGLAYCNSKLANVLF 790
                  S+P+RV+ VSS +H         G++    L   +  Y A LAY  SKL N+LF
Sbjct: 244  QDVLCRSSPARVIVVSSESHRFTDINDSSGKLDLSRLSPPRSDYWAMLAYNRSKLCNILF 303

Query: 791  TQELARRLKGSGVTTYSVHPGT-VDSELVRHSSLLRWIWWLFSFFIKTPQQGAQTSLYCA 967
            + EL RRL   GVT+ +VHPG  + S + R+S + + ++ L   F K+ QQGA T++YCA
Sbjct: 304  SNELHRRLSPRGVTSNAVHPGNMMYSAIHRNSWVYKLLFTLARPFTKSMQQGAATTVYCA 363

Query: 968  LTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVS----CDLLGIP 1102
            +   LE L G +F++C     S +A++E  AR LW++S     D LG P
Sbjct: 364  VAPELEGLGGMYFNNCCRCLPSEEAQSEETARALWELSERLIQDRLGSP 412


>ref|NP_001028498.2| dehydrogenase/reductase SDR family member on chromosome X homolog
            precursor [Mus musculus].
          Length = 335

 Score =  172 bits (435), Expect = 2e-42
 Identities = 109/286 (38%), Positives = 151/286 (52%), Gaps = 11/286 (3%)
 Frame = +2

Query: 272  PGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKL 451
            PG+VA+VTGA  GIG+ TA++LA+ G  V +A  D   G+ V   I+   G+ +     L
Sbjct: 42   PGRVAIVTGATAGIGRSTARQLARLGMCVVVAGNDEHCGQEVVSSIRAEMGSDRAHFLPL 101

Query: 452  DLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXX 631
            DLA   S+R FA+ F A    LH+L+NNAGVM+ P ++T DGFE H+GVN          
Sbjct: 102  DLASLASVRGFARDFRALGLPLHLLVNNAGVMLEPRAETEDGFERHLGVNFLGHFLLTLL 161

Query: 632  XXXXXK----ESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLFTQE 799
                 +    E   SRVV V S  H++G +   +L G   Y    AY  SKLA  LF  +
Sbjct: 162  LLPALRASGAEGRGSRVVTVGSATHYVGTVDMADLHGRHAYSPYAAYAQSKLALALFALQ 221

Query: 800  LARRL--KGSGVTTYSVHPGTVDSELVRHS-----SLLRWIWWLFSFFIKTPQQGAQTSL 958
            L R L  +G  VT+    PG VD+EL RH+     ++ R++ WL     K+P++GA T +
Sbjct: 222  LQRILDARGDPVTSNMADPGVVDTELYRHAGWVLRTVKRFLGWL---VFKSPEEGAWTLV 278

Query: 959  YCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLG 1096
            Y A    LE + G +  D   A     AR++ + RRLW     L G
Sbjct: 279  YAAAAPELEGVGGRYLRDEAEAEPLGTARDQELQRRLWAEGLRLTG 324


>ref|NP_079798.2| dehydrogenase/reductase SDR family member 7 precursor [Mus
           musculus].
          Length = 338

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 6/212 (2%)
 Frame = +2

Query: 266 QLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGN---QQV 436
           +L   V  VTGA++GIG+E A +L+K G  + L+ R  Q+ E V R      GN   + +
Sbjct: 47  ELTDMVVWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLE-NGNLKEKDI 105

Query: 437 LVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAG--VMMCPYSKTADGFETHMGVNXXX 610
           LV  LDL DT S  A  K  L E   + IL+NN G            D F+  + +N   
Sbjct: 106 LVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGRSQRSLVLETNLDVFKELINLNYIG 165

Query: 611 XXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLF 790
                        E    ++V V+S+A            G         YC SK A   F
Sbjct: 166 TVSLTKCVLPHMIERKQGKIVTVNSIA------------GIASVSLSSGYCASKHALRGF 213

Query: 791 TQELARRL-KGSGVTTYSVHPGTVDSELVRHS 883
              L   L +  G+T  +V+PG V S++V+++
Sbjct: 214 FNALHSELGQYPGITFCNVYPGPVQSDIVKNA 245


>ref|NP_671755.2| retinol dehydrogenase similar protein 2 [Mus musculus].
          Length = 318

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 68/221 (30%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
 Frame = +2

Query: 269 LPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRK 448
           L  K   +TG ++G G   A++L +RG RV  AC   +KG   A E++N T ++   V  
Sbjct: 27  LQDKYVFITGCDSGFGNLLARQLDRRGMRVLAACL-TEKG---AEELRNKTSDRLETV-I 81

Query: 449 LDLADTKSIRAFAKGFLAE---EKHLHILINNAGVMM---CPYSKTADGFETHMGVNXXX 610
           LD+  T+SI A A  ++ E    + L  L+NNAG+ +            F + + VN   
Sbjct: 82  LDVTKTESIVA-ATQWVKERVGNRGLWGLVNNAGISVPLGLSQWMNKQNFASVLDVNLLG 140

Query: 611 XXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLF 790
                       ++ A  RVVNVSS+   MGR+  H   G         YC SK     F
Sbjct: 141 MIEVTLTMLPLVRK-ARGRVVNVSSI---MGRVSLHGNGG---------YCISKYGVEAF 187

Query: 791 TQELARRLKGSGVTTYSVHPG---TVDSELVRHSSLLRWIW 904
           +  L R L   GV    + PG   T  +   R SS  + +W
Sbjct: 188 SDSLRRELSYFGVKVAIIEPGFFLTGMASSARLSSNTQMLW 228


>ref|NP_780721.1| dehydrogenase/reductase SDR family member 9 precursor [Mus
           musculus].
          Length = 319

 Score = 60.1 bits (144), Expect = 9e-09
 Identities = 61/201 (30%), Positives = 84/201 (41%), Gaps = 3/201 (1%)
 Frame = +2

Query: 278 KVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLDL 457
           K   +TG +TG G   A+   K+G RV  AC  + +  S A + +       VL+   D 
Sbjct: 30  KYVFITGCDTGFGNLAARTFDKKGFRVIAAC--LTESGSAALKAKTSERLHTVLLDVTDP 87

Query: 458 ADTKSIRAFAKGFLAEEKHLHILINNAGVM--MCPYS-KTADGFETHMGVNXXXXXXXXX 628
            + K    + K  +  EK L  LINNAGV+  + P    T D +   + VN         
Sbjct: 88  ENVKKTAQWVKSHVG-EKGLWGLINNAGVLGVLAPTDWLTVDDYREPIEVNLFGLINVTL 146

Query: 629 XXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLFTQELAR 808
                 K+ A  RV+NVSS+    GR+ F           G  Y  SK A   F   L R
Sbjct: 147 NMLPLVKK-ARGRVINVSSIG---GRLAF----------GGGGYTPSKYAVEGFNDSLRR 192

Query: 809 RLKGSGVTTYSVHPGTVDSEL 871
            +K  GV    + PG   +EL
Sbjct: 193 DMKAFGVHVSCIEPGLFKTEL 213


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 84,695,018
Number of extensions: 2122012
Number of successful extensions: 5499
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 5453
Number of HSP's successfully gapped: 30
Length of query: 956
Length of database: 15,617,559
Length adjustment: 111
Effective length of query: 845
Effective length of database: 12,283,563
Effective search space: 10379610735
Effective search space used: 10379610735
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0053_F06
         (2870 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_854354.1| PREDICTED: similar to Retinol dehydrogenase 11 ...   510   e-144
Alignment   gi|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 ...   415   e-115
Alignment   gi|XP_854127.1| PREDICTED: similar to Retinol dehydrogenase 13 ...   253   6e-67
Alignment   gi|XP_548293.2| PREDICTED: similar to retinol dehydrogenase 11 ...   230   7e-60
Alignment   gi|XP_540096.2| PREDICTED: similar to retinol dehydrogenase 14 ...   226   1e-58
Alignment   gi|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 ...   184   4e-46
Alignment   gi|XP_852222.1| PREDICTED: similar to dehydrogenase/reductase (...   176   1e-43
Alignment   gi|XP_857582.1| PREDICTED: similar to retinol dehydrogenase 14 ...   172   2e-42
Alignment   gi|XP_852623.1| PREDICTED: similar to WW domain-containing oxid...   143   1e-33
Alignment   gi|XP_857503.1| PREDICTED: similar to retinol dehydrogenase 14 ...    63   2e-09

>ref|XP_854354.1| PREDICTED: similar to Retinol dehydrogenase 11 (Retinal reductase 1)
            (RalR1) (Prostate short-chain dehydrogenase/reductase 1)
            (Androgen-regulated short-chain dehydrogenase/reductase
            1) (HCV core-binding protein HCBP12) [Canis familiaris].
          Length = 337

 Score =  510 bits (1313), Expect = e-144
 Identities = 248/298 (83%), Positives = 270/298 (90%)
 Frame = +2

Query: 215  VPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGES 394
            V ++ K+LS GVCTSTVQLPGKVAVVTGANTGIGKETAKELA+RGARVYLACRDV KGE 
Sbjct: 40   VDRLMKILSRGVCTSTVQLPGKVAVVTGANTGIGKETAKELAQRGARVYLACRDVLKGEL 99

Query: 395  VAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTAD 574
            VAREIQ MTGN+QVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPY+KT D
Sbjct: 100  VAREIQTMTGNKQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYTKTVD 159

Query: 575  GFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGL 754
            GFE HMGVN               KESAPSR+VNVSSLAHH+GRIHFH+L+GEKFY++GL
Sbjct: 160  GFEMHMGVNHLGHFLLTHLLLEKLKESAPSRIVNVSSLAHHLGRIHFHDLQGEKFYNSGL 219

Query: 755  AYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFIKTP 934
            AYC+SKLAN+LFTQELARRLKGSG+T YSVHPGTV SELVRHS  ++W+WWLFSFFIKTP
Sbjct: 220  AYCHSKLANILFTQELARRLKGSGITAYSVHPGTVKSELVRHSPFMKWMWWLFSFFIKTP 279

Query: 935  QQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGIPMD 1108
            QQGAQTSLYCA+TEGLEVLSG+HFSDC VAWVSAQARNET+ARRLWDVSCDLLGIP+D
Sbjct: 280  QQGAQTSLYCAITEGLEVLSGHHFSDCSVAWVSAQARNETIARRLWDVSCDLLGIPVD 337


>ref|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 (all-trans and 9-cis)
            [Canis familiaris].
          Length = 303

 Score =  415 bits (1066), Expect = e-115
 Identities = 205/294 (69%), Positives = 240/294 (81%)
 Frame = +2

Query: 227  RKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVARE 406
            RK  + GVC S VQLPGKV V+TGANTGIGKETA+ELA+RGARVY+ACRDV KGES A E
Sbjct: 10   RKFFAGGVCRSNVQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASE 69

Query: 407  IQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFET 586
            I+  T N QVLVRKLDL+DTKSIRAFA+GFLAEEK LHILINNAGVMMCPYSKTADGFET
Sbjct: 70   IRADTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFET 129

Query: 587  HMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCN 766
            H+GVN               KES P+RVVN+SS+AHH+G+IHFH+L+GEK Y  G AYC+
Sbjct: 130  HLGVNHLGHFLLTHLLLERLKESTPARVVNLSSVAHHIGKIHFHDLQGEKRYSRGFAYCH 189

Query: 767  SKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFIKTPQQGA 946
            SKLAN+LFT+ELA+RL+G+GVTTY+VHPG V SELVRHS LL  +W +FS F+K+ ++GA
Sbjct: 190  SKLANMLFTRELAKRLQGTGVTTYAVHPGVVSSELVRHSFLLCLLWRIFSPFVKSAREGA 249

Query: 947  QTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGIPMD 1108
            QTSL+CAL EGLE LSG +FSDC  AWVS +AR+   A RLW+VSC+LLGI  D
Sbjct: 250  QTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARDNKTAERLWNVSCELLGIQWD 303


>ref|XP_854127.1| PREDICTED: similar to Retinol dehydrogenase 13 [Canis familiaris].
          Length = 334

 Score =  253 bits (647), Expect = 6e-67
 Identities = 141/304 (46%), Positives = 186/304 (61%), Gaps = 10/304 (3%)
 Frame = +2

Query: 224  IRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAR 403
            +R  ++ G C S   +PGK  +VTGANTGIGK+TA ELA+RG  + LACRD++K E+ A+
Sbjct: 21   LRDYIAGGACPSKATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAK 80

Query: 404  EIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFE 583
            EI+  T N +V    LDLA  KSIR FA   + EE+ +HIL+NNA VM CP+  T DGFE
Sbjct: 81   EIRGETLNHRVSAWHLDLASLKSIREFAAKIIEEEEQVHILVNNAAVMRCPHWTTKDGFE 140

Query: 584  THMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEK-FYHAGLAY 760
               GVN               K SAPSR++N+SSLAH  G I F +L  EK  Y    AY
Sbjct: 141  MQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWEKRKYDTKAAY 200

Query: 761  CNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSL---------LRWIWWLF 913
            C SKLA +LFT+EL+RRL+G+GVT  ++HPG   +EL RH+ +         L  I+WL 
Sbjct: 201  CQSKLAVILFTKELSRRLQGTGVTVNALHPGVARTELGRHTGMHSSAFSSFTLGPIFWL- 259

Query: 914  SFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLL 1093
               +K+PQ  AQ S Y A+ E LE +SG +F        + +A +E VA+RLW  S  L+
Sbjct: 260  --LVKSPQLAAQPSTYLAVAEELEGVSGKYFDGLKEKAPAPEAEDEEVAQRLWAESARLV 317

Query: 1094 GIPM 1105
            G+ M
Sbjct: 318  GLEM 321


>ref|XP_548293.2| PREDICTED: similar to retinol dehydrogenase 11 (predicted) [Canis
            familiaris].
          Length = 377

 Score =  230 bits (586), Expect = 7e-60
 Identities = 148/337 (43%), Positives = 194/337 (57%), Gaps = 9/337 (2%)
 Frame = +2

Query: 251  CTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQ 430
            C     L G+ AVVTGAN+GIGK TA ELA+RGARV LACR  ++GE+ A +++  +GN 
Sbjct: 28   CGGIASLRGRTAVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNN 87

Query: 431  QVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXX 610
            +V+   LDLA   S+RAFA  FL+ E  L ILI+NAG+  C   +T   F   + VN   
Sbjct: 88   EVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSC--GRTHKPFNLLLRVNHIG 145

Query: 611  XXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNL-RGEKFYHAGL-AYCNSKLANV 784
                        K  APSRVV VSS AH  GR+ F  L R    +   L AY +SKLANV
Sbjct: 146  PFLLTHLLLPRLKTCAPSRVVVVSSAAHRRGRLDFTRLDRPVVGWQQELRAYADSKLANV 205

Query: 785  LFTQELARRLKGSGVTTYSVHPGTVDSEL-VRH-----SSLLRWIWWLFSFFIKTPQQGA 946
            LF +ELA +L+G+GVT Y+ HPG V+SEL +RH       LLR + WL    ++ P+ GA
Sbjct: 206  LFARELATQLEGTGVTCYAAHPGPVNSELFLRHVPGWLCPLLRPLAWL---MLRAPRGGA 262

Query: 947  QTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGIPMD*RVMAV 1126
            QT LYCAL EG+E LSG +F++CHV  V   AR++  A +LW+ S  L G+         
Sbjct: 263  QTPLYCALQEGIEPLSGRYFANCHVEEVPPAARDDRAAHQLWEASKRLAGL--------- 313

Query: 1127 GP-REACSTLLSTPCQNDSPSGWPKP*AQRLQTFHPC 1234
            GP ++A +   S P    +PS    P  +      PC
Sbjct: 314  GPGKDAEADEDSQPEDPRTPSSPSSPHPEEPTVSEPC 350


>ref|XP_540096.2| PREDICTED: similar to retinol dehydrogenase 14 (all-trans and 9-cis)
            isoform 1 [Canis familiaris].
          Length = 336

 Score =  226 bits (575), Expect = 1e-58
 Identities = 126/292 (43%), Positives = 175/292 (59%), Gaps = 17/292 (5%)
 Frame = +2

Query: 275  GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVA----REIQNMTGNQ---- 430
            GK  ++TGAN+G+G+ TA  L + GARV + CRD  + E  A    RE++   G +    
Sbjct: 43   GKTVLITGANSGLGRATAAALLRLGARVIMGCRDRARAEEAAGQLRRELRQAGGREPGSD 102

Query: 431  -----QVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMG 595
                 +++VR+LDLA  +S+RAF +  L EE  L +LINNAG+  CPY KT DGFE   G
Sbjct: 103  VGAAGELVVRELDLASLRSVRAFCQEVLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFG 162

Query: 596  VNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKL 775
            VN               K SAPSR+V VSS  +  G I+F +L  E+ Y+    Y  SKL
Sbjct: 163  VNHLGHFLLTNLLLGLLKNSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFCYSRSKL 222

Query: 776  ANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSF----FIKTPQQG 943
            AN+LFT+ELARRL+G+ VT   +HPG V + L RH  +   +  LF+     F KTP +G
Sbjct: 223  ANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPVEG 282

Query: 944  AQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            AQTS+Y A +  +E +SG +F DC    +  +A +E+VAR+LWD+S  ++GI
Sbjct: 283  AQTSVYLASSPEVEGVSGKYFGDCKEEELLPKAMDESVARKLWDISEVMVGI 334


>ref|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 [Canis familiaris].
          Length = 596

 Score =  184 bits (467), Expect = 4e-46
 Identities = 111/283 (39%), Positives = 164/283 (57%), Gaps = 3/283 (1%)
 Frame = +2

Query: 260  TVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVL 439
            +  L GK AVVTGAN+GIGK   +ELA+RGARV LACR+ ++G+    EIQ  +    +L
Sbjct: 310  STDLTGKTAVVTGANSGIGKAVCQELARRGARVILACRNWERGQKALAEIQVASKGTCLL 369

Query: 440  VRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXX 619
            + ++DL+   SIR+FA+  L E   +H+L+NNA +   P + T +G +     N      
Sbjct: 370  LGQVDLSSMASIRSFARWLLQEYPEIHLLVNNAAISGFPKTLTPEGLDLTFATNYVGPFL 429

Query: 620  XXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGE-KFYHAGLAYCNSKLANVLFTQ 796
                     + +  +RVVNVSS  H  G +   +L G  K  +   +Y  SKL    FT 
Sbjct: 430  LTNLLQGALQRAGSARVVNVSSFRHAHGYVDEKHLTGAGKPLNLIQSYDCSKLLLTSFTG 489

Query: 797  ELARRLKGSGVTTYSVHPGTVDSELVR-HSSLLRWIWWLFSFFIKTPQQGAQTSLYCALT 973
            ELARRL+G+GVT  SV PG V +E+++ +  L R+++WLFSFF K  +QGA   LY +L 
Sbjct: 490  ELARRLQGTGVTVNSVDPGVVYTEIMKPYPWLYRFLFWLFSFFCKDVKQGAIPVLYLSLA 549

Query: 974  EGLEVLSGNHF-SDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            + L+ +SG +F S C +   +  A++  VA+ LW+ S  L  +
Sbjct: 550  KELDGVSGKYFSSSCMITLPTEAAQDPQVAQSLWNASVQLTNL 592


>ref|XP_852222.1| PREDICTED: similar to dehydrogenase/reductase (SDR family) X-linked
            [Canis familiaris].
          Length = 387

 Score =  176 bits (446), Expect = 1e-43
 Identities = 117/288 (40%), Positives = 152/288 (52%), Gaps = 12/288 (4%)
 Frame = +2

Query: 272  PGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKL 451
            P +VA+VTG   GIG  TAK LA+ G  V LA  +      V R+IQ  T N +V     
Sbjct: 94   PERVAIVTGGTDGIGYSTAKHLARLGMHVILAGNNDSSAPDVVRKIQEETLNDKVEFLYC 153

Query: 452  DLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXX 631
            DLA  +SIR F + F  ++  LH+L+NNAGVMM P   T DGFE H G+N          
Sbjct: 154  DLASLRSIRQFVQKFKKKKIPLHVLVNNAGVMMVPERTTEDGFEEHFGLNYLGHFLLTNL 213

Query: 632  XXXXXKES-AP---SRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLFTQE 799
                 KES AP   +RVV VSS  H++G +   +L+G + Y    AY  SKLA VLFT  
Sbjct: 214  LLDTLKESGAPGRCARVVTVSSATHYIGELDMDDLQGSRCYSPHAAYAQSKLALVLFTYH 273

Query: 800  LARRL--KGSGVTTYSVHPGTVDSELVRH----SSLLRWI--WWLFSFFIKTPQQGAQTS 955
            L R L  +GS VT   V PG V++ L RH    + L++ +  WW    F KTP +GA TS
Sbjct: 274  LQRLLAAQGSPVTANVVDPGVVNTNLYRHVFWGTRLIKKLFGWW----FFKTPDEGAWTS 329

Query: 956  LYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            +Y A+T  LE L G +  +       A   +  +   LW  SC + GI
Sbjct: 330  VYAAVTPDLEGLGGRYLYNEKETKSLAVTYDLDLQTELWARSCQMTGI 377


>ref|XP_857582.1| PREDICTED: similar to retinol dehydrogenase 14 (all-trans and 9-cis)
            isoform 4 [Canis familiaris].
          Length = 307

 Score =  172 bits (435), Expect = 2e-42
 Identities = 108/292 (36%), Positives = 155/292 (53%), Gaps = 17/292 (5%)
 Frame = +2

Query: 275  GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVA----REIQNMTGNQ---- 430
            GK  ++TGAN+G+G+ TA  L + GARV + CRD  + E  A    RE++   G +    
Sbjct: 43   GKTVLITGANSGLGRATAAALLRLGARVIMGCRDRARAEEAAGQLRRELRQAGGREPGSD 102

Query: 431  -----QVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMG 595
                 +++VR+LDLA  +S+RAF +  L                               G
Sbjct: 103  VGAAGELVVRELDLASLRSVRAFCQEVL-----------------------------QFG 133

Query: 596  VNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKL 775
            VN               K SAPSR+V VSS  +  G I+F +L  E+ Y+    Y  SKL
Sbjct: 134  VNHLGHFLLTNLLLGLLKNSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFCYSRSKL 193

Query: 776  ANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSF----FIKTPQQG 943
            AN+LFT+ELARRL+G+ VT   +HPG V + L RH  +   +  LF+     F KTP +G
Sbjct: 194  ANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPVEG 253

Query: 944  AQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            AQTS+Y A +  +E +SG +F DC    +  +A +E+VAR+LWD+S  ++GI
Sbjct: 254  AQTSVYLASSPEVEGVSGKYFGDCKEEELLPKAMDESVARKLWDISEVMVGI 305


>ref|XP_852623.1| PREDICTED: similar to WW domain-containing oxidoreductase isoform 1
           [Canis familiaris].
          Length = 383

 Score =  143 bits (360), Expect = 1e-33
 Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 8/243 (3%)
 Frame = +2

Query: 275 GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLD 454
           GKV VVTGAN+GIG ETAK  A  GA V LACR++ +      +I       +V    LD
Sbjct: 124 GKVVVVTGANSGIGFETAKSFALHGAHVILACRNMTRANEAVSQILGEWHKAKVEAMTLD 183

Query: 455 LADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXXX 634
           LA  +S++ FA+ F A+   LH+L+ NA     P+S T DG ET   VN           
Sbjct: 184 LALLRSVQHFAQAFKAKNVSLHVLVCNAAAFALPWSLTKDGLETTFQVNHLGHFYLVQLL 243

Query: 635 XXXXKESAPSRVVNVSSLAHHM-------GRIHFHNLRGEKF-YHAGLAYCNSKLANVLF 790
                 SAP+RVV VSS +H         G++ F  L   K  Y A LAY  SKL N+LF
Sbjct: 244 QDVLCRSAPARVVVVSSESHRFTDINDSSGKLDFSRLSPSKSDYWAMLAYNRSKLCNILF 303

Query: 791 TQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFIKTPQQGAQTSLYCAL 970
           + EL RRL   GVT+ +VHPG      + +SS+ R  WW+++      +   ++ L  + 
Sbjct: 304 SNELHRRLSPRGVTSNAVHPGN-----MMYSSIHR-NWWVYTLLFTLARPFTKSMLLVSC 357

Query: 971 TEG 979
           ++G
Sbjct: 358 SDG 360


>ref|XP_857503.1| PREDICTED: similar to retinol dehydrogenase 14 (all-trans and
           9-cis) isoform 3 [Canis familiaris].
          Length = 153

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 13/92 (14%)
 Frame = +2

Query: 275 GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVA----REIQNMTGNQ---- 430
           GK  ++TGAN+G+G+ TA  L + GARV + CRD  + E  A    RE++   G +    
Sbjct: 43  GKTVLITGANSGLGRATAAALLRLGARVIMGCRDRARAEEAAGQLRRELRQAGGREPGSD 102

Query: 431 -----QVLVRKLDLADTKSIRAFAKGFLAEEK 511
                +++VR+LDLA  +S+RAF +  L   K
Sbjct: 103 VGAAGELVVRELDLASLRSVRAFCQEVLQGRK 134


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 100,560,810
Number of extensions: 2513842
Number of successful extensions: 6368
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 6324
Number of HSP's successfully gapped: 26
Length of query: 956
Length of database: 18,874,504
Length adjustment: 112
Effective length of query: 844
Effective length of database: 15,140,872
Effective search space: 12778895968
Effective search space used: 12778895968
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0053_F06
         (2870 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001928802.1| PREDICTED: retinol dehydrogenase 11 [Sus scr...   575   e-164
Alignment   gi|NP_001230331.1| retinol dehydrogenase 12 [Sus scrofa].            417   e-116
Alignment   gi|XP_003125388.1| PREDICTED: retinol dehydrogenase 14-like [Su...   226   7e-59
Alignment   gi|XP_003125042.1| PREDICTED: retinol dehydrogenase 12-like [Su...   103   7e-22
Alignment   gi|XP_003126896.2| PREDICTED: WW domain-containing oxidoreducta...    83   1e-15
Alignment   gi|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR famil...    64   4e-10
Alignment   gi|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 1...    61   3e-09
Alignment   gi|XP_003355526.1| PREDICTED: short-chain dehydrogenase/reducta...    60   7e-09
Alignment   gi|XP_003355528.1| PREDICTED: retinol dehydrogenase 16-like iso...    58   3e-08
Alignment   gi|XP_003355527.1| PREDICTED: retinol dehydrogenase 16-like iso...    58   3e-08

>ref|XP_001928802.1| PREDICTED: retinol dehydrogenase 11 [Sus scrofa].
          Length = 316

 Score =  575 bits (1481), Expect = e-164
 Identities = 289/316 (91%), Positives = 290/316 (91%)
 Frame = +2

Query: 161  MIGVXXXXXXXXXXXYIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELA 340
            MIGV           YIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELA
Sbjct: 1    MIGVLLLLLLLPLLLYIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELA 60

Query: 341  KRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLH 520
            KRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLH
Sbjct: 61   KRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLH 120

Query: 521  ILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHM 700
            ILINNAGVMMCPYSKTADGFETHMGVN               KESAPSRVVNVSSLAHHM
Sbjct: 121  ILINNAGVMMCPYSKTADGFETHMGVNHLGHFLLTHLLLEKLKESAPSRVVNVSSLAHHM 180

Query: 701  GRIHFHNLRGEKFYHAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRH 880
            GRIHFHNL+GEKFYHAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRH
Sbjct: 181  GRIHFHNLQGEKFYHAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRH 240

Query: 881  SSLLRWIWWLFSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVA 1060
            SSLLRWIWWLFSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVA
Sbjct: 241  SSLLRWIWWLFSFFIKTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVA 300

Query: 1061 RRLWDVSCDLLGIPMD 1108
            RRLWDVSCDLLGIPMD
Sbjct: 301  RRLWDVSCDLLGIPMD 316


>ref|NP_001230331.1| retinol dehydrogenase 12 [Sus scrofa].
          Length = 316

 Score =  417 bits (1071), Expect = e-116
 Identities = 205/298 (68%), Positives = 240/298 (80%)
 Frame = +2

Query: 206  YIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQK 385
            Y+  P IRK  + GVC + +QLPGKV V+TGANTGIGKETA+ELA+RGARVY+ACRDV K
Sbjct: 16   YVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLK 75

Query: 386  GESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSK 565
            GES A EI+  T N QVLVRKLDL+DTKSIRAFA+GFL EEK LHILINNAGVM+CPYSK
Sbjct: 76   GESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSK 135

Query: 566  TADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYH 745
            TADGFETH+GVN               K SAP+RVVN+SS+ HH G+I FH+L+GEK Y+
Sbjct: 136  TADGFETHLGVNHLGHFLLTHLLLEQLKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYN 195

Query: 746  AGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFFI 925
             G AYC+SKLANVLFT+ELA+RL+G+GVTTY+VHPG V SELVRHS LL  +W LFS F+
Sbjct: 196  RGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFSRFL 255

Query: 926  KTPQQGAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            KT ++GAQTSL+CAL EGLE LSG +FSDC  AWVS +ARN   A RLW+VSC+LLGI
Sbjct: 256  KTAREGAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 313


>ref|XP_003125388.1| PREDICTED: retinol dehydrogenase 14-like [Sus scrofa].
          Length = 336

 Score =  226 bits (575), Expect = 7e-59
 Identities = 124/292 (42%), Positives = 174/292 (59%), Gaps = 17/292 (5%)
 Frame = +2

Query: 275  GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQ-------------N 415
            GK  ++TGAN+G+G+ TA EL + GARV + CRD  + E  A +++             N
Sbjct: 43   GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQTEGPEEGPN 102

Query: 416  MTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMG 595
              G  +++VR+LDLA  +S+RAF +  L EE  L +LINNAG+  CPY KT DGFE    
Sbjct: 103  SGGAGELVVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFA 162

Query: 596  VNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKL 775
            VN               K SAPSR+V VSS  +  G I+F +L  E+ Y+    Y  SKL
Sbjct: 163  VNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFCYSRSKL 222

Query: 776  ANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSF----FIKTPQQG 943
            AN+LFT+ELARRL+G+ VT   +HPG V + L RH  +   +  LF+     F KTP +G
Sbjct: 223  ANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPAEG 282

Query: 944  AQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 1099
            AQTS+Y A +  +E +SG +F DC    +  +A +++VAR+LWD+S  ++GI
Sbjct: 283  AQTSVYLASSPEVEGVSGKYFGDCKEEELLPKAMDDSVARKLWDISEVMVGI 334


>ref|XP_003125042.1| PREDICTED: retinol dehydrogenase 12-like [Sus scrofa].
          Length = 181

 Score =  103 bits (256), Expect = 7e-22
 Identities = 51/114 (44%), Positives = 74/114 (64%)
 Frame = +2

Query: 260 TVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVL 439
           +  L GK AVVTGAN+GIGK  ++ELA+RGARV LACR  ++G+    EIQ  T + ++L
Sbjct: 44  STDLTGKTAVVTGANSGIGKAVSQELARRGARVILACRSRERGQGALTEIQAATRSNRLL 103

Query: 440 VRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYSKTADGFETHMGVN 601
           +  +DL+   SIR+F +  L E   +H+L+NNAGV   P ++T +G +     N
Sbjct: 104 LGGVDLSSMASIRSFVQWLLRESPEIHLLVNNAGVSGFPRTRTPEGLDLTFATN 157


>ref|XP_003126896.2| PREDICTED: WW domain-containing oxidoreductase-like, partial [Sus
           scrofa].
          Length = 163

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 57/142 (40%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
 Frame = +2

Query: 515 LHILINNAGVMMCPYSKTADGFETHMGVNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAH 694
           LH+L+ NA V   P+S T DG ET   VN                 SAP+RVV VSS +H
Sbjct: 2   LHVLVCNAAVFALPWSLTKDGLETTFQVNHLGHFYLVQLLQDVLCRSAPARVVVVSSESH 61

Query: 695 HM-------GRIHFHNLR-GEKFYHAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHP 850
                    G++ F  L      Y A LAY  SKL N+LF+ EL RRL   GVT+ +VHP
Sbjct: 62  RFTDINDSSGKLDFSRLSPSHSDYWAMLAYNRSKLCNILFSNELHRRLSPRGVTSNAVHP 121

Query: 851 GTVDSELVRHSSLLRWIWWLFS 916
           G      +  SSL R  WW+++
Sbjct: 122 GN-----MMFSSLHRG-WWVYT 137


>ref|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR family member 7 [Sus
           scrofa].
          Length = 339

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 6/212 (2%)
 Frame = +2

Query: 266 QLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREI--QNMTGNQQVL 439
           +L   V  VTGA++GIG+E   +L+K G  + L+ R VQ+ E V R      +   + +L
Sbjct: 47  ELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDIL 106

Query: 440 VRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGV---MMCPYSKTADGFETHMGVNXXX 610
           +  LDLA+  S     K  L E   + IL+NN GV    +C    + D ++  M VN   
Sbjct: 107 ILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLC-VDTSLDVYKELMEVNYLG 165

Query: 611 XXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLF 790
                        E    +++ V+S    MG I      G         YC SK A   F
Sbjct: 166 TVSLTKCVLPHMIEKKQGKIITVNSF---MGIIAAPLSGG---------YCASKHALRGF 213

Query: 791 TQELARRLKG-SGVTTYSVHPGTVDSELVRHS 883
              L   L    G+T  +V PG V S +V+++
Sbjct: 214 FNTLRTELATYPGITVSNVCPGPVKSNIVKNA 245


>ref|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 11-like [Sus scrofa].
          Length = 313

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
 Frame = +2

Query: 275 GKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRKLD 454
           G++ ++TGA  G+G+ TA E AK   ++ L   +    E  A E + +       V  +D
Sbjct: 36  GEIVLITGAGHGLGRLTAFEFAKLKCKLVLWDINKHGLEETADECKRLGSKAHAFV--VD 93

Query: 455 LADTKSIRAFAKGFLAEEKHLHILINNAGVMMCP--YSKTADGFETHMGVNXXXXXXXXX 628
            +D + I + AK   AE   + IL+NNAGV+     ++      E    VN         
Sbjct: 94  CSDREDIYSSAKKVKAEVGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNILAHFWTTK 153

Query: 629 XXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVLF----TQ 796
                  ++    +V V+S A H G I F            LAYC+SK A V F    T+
Sbjct: 154 AFLPAMMKNNHGHIVTVASAAGHAG-IPFL-----------LAYCSSKFAAVGFHKALTE 201

Query: 797 ELARRLKGSGVTTYSVHPGTVDSELVRH 880
           ELA  LK +GV T  + P  +++  +++
Sbjct: 202 ELA-ALKRTGVKTTCLCPNFINTGFIKN 228


>ref|XP_003355526.1| PREDICTED: short-chain dehydrogenase/reductase family 9C member
           7-like [Sus scrofa].
          Length = 313

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 63/226 (27%), Positives = 94/226 (41%), Gaps = 8/226 (3%)
 Frame = +2

Query: 251 CTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQ 430
           C     L  K   +TG ++G G   A++L  RG RV  AC      E  A+++Q  T + 
Sbjct: 17  CNVVRNLSDKYVFITGCDSGFGNLLARQLVDRGMRVLAACFT----EEGAQKLQQDT-SY 71

Query: 431 QVLVRKLDLADTKSIRAFAKGF--LAEEKHLHILINNAGVMMCPYSK---TADGFETHMG 595
           ++    LD+  T+SI+A A+       E+ L  L+NNAGV +        T + F   + 
Sbjct: 72  RLQTTLLDVTKTESIKAAAQWVRDQVSEQGLWALVNNAGVGLPSGPNEWLTKEDFVKVIN 131

Query: 596 VNXXXXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKL 775
           VN               K+ A  RVVN+SS              G +    G  YC SK 
Sbjct: 132 VNLVGLIEVTLHMLPMVKK-ARGRVVNMSS-------------SGGRVAVIGGGYCVSKF 177

Query: 776 ANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSL---LRWIW 904
               F+  + R L   GV    + PG   + ++   SL   +R +W
Sbjct: 178 GVEAFSDSIRRELHYFGVKVSIIEPGNYRTSILGKESLEMRMRKMW 223


>ref|XP_003355528.1| PREDICTED: retinol dehydrogenase 16-like isoform 2 [Sus scrofa].
          Length = 317

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 7/202 (3%)
 Frame = +2

Query: 269 LPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRK 448
           L  K   +TG ++G G   A++L  RG RV  AC      E  A++++  T ++   V  
Sbjct: 27  LRDKYVFITGCDSGFGNLLARQLDLRGLRVLAACLT----EQGAQQLRKQTSDRLETV-L 81

Query: 449 LDLADTKSIRAFAKGFLAE---EKHLHILINNAGVMMCPYSK----TADGFETHMGVNXX 607
           LD+  T+S+ A AK ++ E   ++ L  L+NNAG+ M P +     T   F   + VN  
Sbjct: 82  LDVTKTESVAA-AKEWVKERVGDRGLWGLVNNAGICM-PLAPNEWLTKQDFMVMLDVNLL 139

Query: 608 XXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVL 787
                        +++   RVVNVSS+   MGR+             G  YC SK     
Sbjct: 140 GMVDVTLQLLPLVRKT-KGRVVNVSSV---MGRVSLF----------GGGYCLSKYGVEA 185

Query: 788 FTQELARRLKGSGVTTYSVHPG 853
           F+  L R L   GV    + PG
Sbjct: 186 FSDSLRRELSYFGVKVAMIEPG 207


>ref|XP_003355527.1| PREDICTED: retinol dehydrogenase 16-like isoform 1 [Sus scrofa].
          Length = 317

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 7/202 (3%)
 Frame = +2

Query: 269 LPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQKGESVAREIQNMTGNQQVLVRK 448
           L  K   +TG ++G G   A++L  RG RV  AC      E  A++++  T ++   V  
Sbjct: 27  LRDKYVFITGCDSGFGNLLARQLDLRGLRVLAACLT----EQGAQQLRKQTSDRLETV-L 81

Query: 449 LDLADTKSIRAFAKGFLAE---EKHLHILINNAGVMMCPYSK----TADGFETHMGVNXX 607
           LD+  T+S+ A AK ++ E   ++ L  L+NNAG+ M P +     T   F   + VN  
Sbjct: 82  LDVTKTESVAA-AKEWVKERVGDRGLWGLVNNAGICM-PLAPNEWLTKQDFMVMLDVNLL 139

Query: 608 XXXXXXXXXXXXXKESAPSRVVNVSSLAHHMGRIHFHNLRGEKFYHAGLAYCNSKLANVL 787
                        +++   RVVNVSS+   MGR+             G  YC SK     
Sbjct: 140 GMVDVTLQLLPLVRKT-KGRVVNVSSV---MGRVSLF----------GGGYCLSKYGVEA 185

Query: 788 FTQELARRLKGSGVTTYSVHPG 853
           F+  L R L   GV    + PG
Sbjct: 186 FSDSLRRELSYFGVKVAMIEPG 207


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 63,846,768
Number of extensions: 1881537
Number of successful extensions: 3973
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 3947
Number of HSP's successfully gapped: 26
Length of query: 956
Length of database: 11,343,932
Length adjustment: 108
Effective length of query: 848
Effective length of database: 8,655,056
Effective search space: 7339487488
Effective search space used: 7339487488
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRM1_0053_F06
         (2870 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr07                                                        2476   0.0  
Sscrofa_ChrX                                                           62   2e-06

>Sscrofa_Chr07 
||          Length = 134764511

 Score = 2476 bits (1249), Expect = 0.0
 Identities = 1255/1257 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1006     cagtgactgccatgtggcatgggtctctgcccaggctcgtaacgagacagtagcaaggcg 1065
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97724199 cagtgactgccatgtggcatgggtctctgcccaggctcgtaacgagacagtagcaaggcg 97724140

                                                                            
Query: 1066     gctatgggatgtcagctgtgacctgctgggcatccctatggattgacgggtgatggcagt 1125
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97724139 gctatgggatgtcagctgtgacctgctgggcatccctatggattgacgggtgatggcagt 97724080

                                                                            
Query: 1126     tggaccaagagaagcctgcagcacactactcagtactccctgccaaaatgattctccttc 1185
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97724079 tggaccaagagaagcctgcagcacactactcagtactccctgccaaaatgattctccttc 97724020

                                                                            
Query: 1186     aggatggccaaaaccttgagcacaaagactgcaaaccttccatccttgcctgcttgatgt 1245
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97724019 aggatggccaaaaccttgagcacaaagactgcaaaccttccatccttgcctgcttgatgt 97723960

                                                                            
Query: 1246     tggataaaagcccagtgtacactgccagactcatctaaacgccttgcatttgtctagatt 1305
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723959 tggataaaagcccagtgtacactgccagactcatctaaacgccttgcatttgtctagatt 97723900

                                                                            
Query: 1306     tattttgttcctattactgccagagttaccagagataatgtaggataggtggaccctcat 1365
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723899 tattttgttcctattactgccagagttaccagagataatgtaggataggtggaccctcat 97723840

                                                                            
Query: 1366     atgcctgccaccatatgaccgcttgtattttccctctgaaacctactacctaggagagcc 1425
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723839 atgcctgccaccatatgaccgcttgtattttccctctgaaacctactacctaggagagcc 97723780

                                                                            
Query: 1426     taagctatggcagggttgatttacagcactttagatttgtttctgtccttcttgtccaca 1485
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723779 taagctatggcagggttgatttacagcactttagatttgtttctgtccttcttgtccaca 97723720

                                                                            
Query: 1486     atgtagttcctctcgaccaaacaaccttcaaaggggccacgctgcagcctcagctaagct 1545
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723719 atgtagttcctctcgaccaaacaaccttcaaaggggccacgctgcagcctcagctaagct 97723660

                                                                            
Query: 1546     ccaggagtcacagtggcttggctcaagagcaagatttctcccttatctcttaagaaaacc 1605
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723659 ccaggagtcacagtggcttggctcaagagcaagatttctcccttatctcttaagaaaacc 97723600

                                                                            
Query: 1606     atcatggcaccaacatctggagtcttgaaagaaactcttaactgaatctgggttgtggca 1665
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723599 atcatggcaccaacatctggagtcttgaaagaaactcttaactgaatctgggttgtggca 97723540

                                                                            
Query: 1666     tggctttatctctgacaccgcttttaagacactttcccatgcctagaccacaaaagagct 1725
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723539 tggcttcatctctgacaccgcttttaagacactttcccatgcctagaccacaaaagagct 97723480

                                                                            
Query: 1726     tccttttctaagaaggtagtagggtttaggggatggtaggaatttgggggaaggcagaga 1785
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723479 tccttttctaagaaggtagtagggtttaggggatggtaggaatttgggggaaggcagaga 97723420

                                                                            
Query: 1786     taaaaatcaaattgaaactgtcattcatttttctatttctcaaaccagcaagagggtagt 1845
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723419 taaaaatcaaattgaaactgtcattcatttttctatttctcaaaccagcaagagggtagt 97723360

                                                                            
Query: 1846     ggaagaagcagtttgcaaagatatgccacctgacttcaattactgaaggaggcctcattt 1905
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723359 ggaagaagcagtttgcaaagatatgccacctgacttcaattactgaaggaggcctcattt 97723300

                                                                            
Query: 1906     ttgtgccttagtttctcttagagaaccagaagacaggaaaggctttttgatgattgtccc 1965
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723299 ttgtgccttagtttctcttagagaaccagaagacaggaaaggctttttgatgattgtccc 97723240

                                                                            
Query: 1966     tgagtgtatctttgtgtgtgttcttttatatttatgcagttgggagcattcaaaatagcc 2025
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723239 tgagtgtatctttgtgtgtgttcttttatatttatgcagttgggagcattcaaaatagcc 97723180

                                                                            
Query: 2026     acaaaggaacagtattatactggatcctagtgcaggtaaatgatcagagaccgatcaaat 2085
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723179 acaaaggaacagtattatactggatcctagtgcaggtaaatgatcagagaccgatcaaat 97723120

                                                                            
Query: 2086     cagtgtcattcagtctttgatacaaatgggtagagctacaaatagaagtgaactttgtat 2145
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97723119 cagtgtcattcagtctttgatacaaatgggtagagctacaaatagaagtgaactttgtat 97723060

                                                                            
Query: 2146     ctgctcagaactaccaatcaggaagcacatgggtagcatggaagaaatccaaaaaagaat 2205
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 97723059 ctgctcagaactaccaatcaagaagcacatgggtagcatggaagaaatccaaaaaagaat 97723000

                                                                         
Query: 2206     cctagaagatactgcatgcaaaggcaatgaagggactagttaagggtttgtttttca 2262
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97722999 cctagaagatactgcatgcaaaggcaatgaagggactagttaagggtttgtttttca 97722943



 Score =  870 bits (439), Expect = 0.0
 Identities = 439/439 (100%)
 Strand = Plus / Minus

                                                                            
Query: 2415     ttcaacaaaatattttaaggactggtgttggtaattacagtcaatttaaaaaatctttta 2474
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97722790 ttcaacaaaatattttaaggactggtgttggtaattacagtcaatttaaaaaatctttta 97722731

                                                                            
Query: 2475     gggcatttccttacattatcttgatattaatgtctactgtacttgctagaaatctacatt 2534
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97722730 gggcatttccttacattatcttgatattaatgtctactgtacttgctagaaatctacatt 97722671

                                                                            
Query: 2535     tggagaacttttatcaaaaggaatgctgctgaaggaaggctgaggaattggtaatagttc 2594
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97722670 tggagaacttttatcaaaaggaatgctgctgaaggaaggctgaggaattggtaatagttc 97722611

                                                                            
Query: 2595     atcccctgttttgagtacatacttctactagagtttgtgattttcttggactaacatata 2654
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97722610 atcccctgttttgagtacatacttctactagagtttgtgattttcttggactaacatata 97722551

                                                                            
Query: 2655     ttcacttaggtggagaaaagagtgtaggaccacagtcttctcatatttgtaaataatctt 2714
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97722550 ttcacttaggtggagaaaagagtgtaggaccacagtcttctcatatttgtaaataatctt 97722491

                                                                            
Query: 2715     ttgttgaacttgttttgaccattaaactagacatagttattttacggaaaaattgggaaa 2774
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97722490 ttgttgaacttgttttgaccattaaactagacatagttattttacggaaaaattgggaaa 97722431

                                                                            
Query: 2775     cttttgataatagtgtggaactgaattaatatttaatgtatattgaactgtcaatcacaa 2834
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97722430 cttttgataatagtgtggaactgaattaatatttaatgtatattgaactgtcaatcacaa 97722371

                                   
Query: 2835     ataaaaacttttgattatg 2853
                |||||||||||||||||||
Sbjct: 97722370 ataaaaacttttgattatg 97722352



 Score =  454 bits (229), Expect = e-124
 Identities = 229/229 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        ctttttgccctaaaccgggctttggactacatttcccagatggctttgcttcccggcctg 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97759848 ctttttgccctaaaccgggctttggactacatttcccagatggctttgcttcccggcctg 97759789

                                                                            
Query: 61       tgctactttatcagggcgtgtcttggaagagaagcccaatcccctagctacgctgggacc 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97759788 tgctactttatcagggcgtgtcttggaagagaagcccaatcccctagctacgctgggacc 97759729

                                                                            
Query: 121      tctcgctgcgcttcagcagccgcagctgcctctaggcaagatgattggggtcctgctcct 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97759728 tctcgctgcgcttcagcagccgcagctgcctctaggcaagatgattggggtcctgctcct 97759669

                                                                 
Query: 181      gctccttcttctccctttgctcctgtacatcgctgtaccccaaatcagg 229
                |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97759668 gctccttcttctccctttgctcctgtacatcgctgtaccccaaatcagg 97759620



 Score =  416 bits (210), Expect = e-113
 Identities = 213/214 (99%)
 Strand = Plus / Minus

                                                                            
Query: 606      taggtcacttcctcctgacccatctgttactagagaagctgaaggaatcagccccatcaa 665
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97743264 taggtcacttcctcctgacccatctgttactagagaagctgaaggaatcagccccatcaa 97743205

                                                                            
Query: 666      gggtagtgaatgtgtcttccttagcacatcacatgggaaggatccacttccataacctgc 725
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97743204 gggtagtgaatgtgtcttccttagcacatcacatgggaaggatccacttccataacctgc 97743145

                                                                            
Query: 726      ggggtgagaagttctaccatgcgggtctggcctactgtaacagcaagttagccaatgttc 785
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97743144 agggtgagaagttctaccatgcgggtctggcctactgtaacagcaagttagccaatgttc 97743085

                                                  
Query: 786      tcttcacccaggaactggcccggaggctaaaagg 819
                ||||||||||||||||||||||||||||||||||
Sbjct: 97743084 tcttcacccaggaactggcccggaggctaaaagg 97743051



 Score =  381 bits (192), Expect = e-102
 Identities = 192/192 (100%)
 Strand = Plus / Minus

                                                                            
Query: 817      aggctctggcgttacaacatactcagtacaccctggcacagttgactctgaattggttcg 876
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97739855 aggctctggcgttacaacatactcagtacaccctggcacagttgactctgaattggttcg 97739796

                                                                            
Query: 877      gcactcatccctcctgagatggatttggtggcttttctccttcttcatcaagacccctca 936
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97739795 gcactcatccctcctgagatggatttggtggcttttctccttcttcatcaagacccctca 97739736

                                                                            
Query: 937      gcagggagcccagaccagcctgtactgtgccttaacagaaggtcttgaggttctaagtgg 996
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97739735 gcagggagcccagaccagcctgtactgtgccttaacagaaggtcttgaggttctaagtgg 97739676

                            
Query: 997      aaaccatttcag 1008
                ||||||||||||
Sbjct: 97739675 aaaccatttcag 97739664



 Score =  305 bits (154), Expect = 7e-80
 Identities = 157/158 (99%)
 Strand = Plus / Minus

                                                                            
Query: 346      aggagcccgtgtatatttagcctgccgggatgtgcaaaagggggaatcggtggccagaga 405
                ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 97746030 aggagcccgtgtatatttagcctgccgggatgtgcaaaagggggaatcggtagccagaga 97745971

                                                                            
Query: 406      aatccagaacatgacaggaaaccaacaggtattggtgcggaaactggacctggctgatac 465
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97745970 aatccagaacatgacaggaaaccaacaggtattggtgcggaaactggacctggctgatac 97745911

                                                      
Query: 466      taaatctattcgagcttttgctaagggcttcttagcag 503
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 97745910 taaatctattcgagcttttgctaagggcttcttagcag 97745873



 Score =  244 bits (123), Expect = 2e-61
 Identities = 123/123 (100%)
 Strand = Plus / Minus

                                                                            
Query: 226      caggaaaatgctgtccagcggggtgtgtacatcaaccgtccagcttcctgggaaggtcgc 285
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97747304 caggaaaatgctgtccagcggggtgtgtacatcaaccgtccagcttcctgggaaggtcgc 97747245

                                                                            
Query: 286      tgtggtcactggagccaacacaggcattgggaaggagacggccaaagagctggctaaaag 345
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97747244 tgtggtcactggagccaacacaggcattgggaaggagacggccaaagagctggctaaaag 97747185

                   
Query: 346      agg 348
                |||
Sbjct: 97747184 agg 97747182



 Score =  220 bits (111), Expect = 3e-54
 Identities = 111/111 (100%)
 Strand = Plus / Minus

                                                                            
Query: 500      gcagaagaaaagcatctccacattttgatcaacaatgcaggagtgatgatgtgtccttac 559
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97744137 gcagaagaaaagcatctccacattttgatcaacaatgcaggagtgatgatgtgtccttac 97744078

                                                                   
Query: 560      tccaagacagcagacggctttgagacgcacatgggagtcaaccacttaggt 610
                |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97744077 tccaagacagcagacggctttgagacgcacatgggagtcaaccacttaggt 97744027



 Score =  109 bits (55), Expect = 9e-21
 Identities = 88/99 (88%)
 Strand = Plus / Plus

                                                                            
Query: 506      gaaaagcatctccacattttgatcaacaatgcaggagtgatgatgtgtccttactccaag 565
                |||||||| ||||| ||| ||||||||||||| ||||||||| ||||||| || ||||||
Sbjct: 97791855 gaaaagcagctccatattctgatcaacaatgctggagtgatgttgtgtccatattccaag 97791914

                                                       
Query: 566      acagcagacggctttgagacgcacatgggagtcaaccac 604
                ||||| || ||||||||||| ||| ||||||||||||||
Sbjct: 97791915 acagcggatggctttgagacccacctgggagtcaaccac 97791953



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                          
Query: 438      tggtgcggaaactggacctggctgatactaaatctattcgagcttttgctaagggctt 495
                |||||||||||||||||||  ||||||| ||||| || ||||| |||||| |||||||
Sbjct: 97791131 tggtgcggaaactggacctctctgataccaaatccatccgagcctttgctgagggctt 97791188


>Sscrofa_ChrX 
||          Length = 144288218

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                            
Query: 507      aaaagcatctccacattttgatcaacaatgcaggagtgatgatgtgtccttactccaaga 566
                ||||||| ||||  ||| |||||| |||  ||||||||||||||||| | || |||||||
Sbjct: 47505256 aaaagcagctccgtattctgatcagcaacacaggagtgatgatgtgttcatattccaaga 47505315

                                                   
Query: 567      cagcagacggctttgagacgcacatgggagtcaac 601
                |||| || |||||||| || ||| ||||| |||||
Sbjct: 47505316 cagccgatggctttgaaacccacctgggaatcaac 47505350


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 93,183,623
Number of extensions: 774
Number of successful extensions: 774
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 774
Number of HSP's successfully gapped: 11
Length of query: 2870
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2848
Effective length of database: 2,808,408,574
Effective search space: 7998347618752
Effective search space used: 7998347618752
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)