Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= OVRM1_0111_E04
(3182 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 527 e-146
gb|GL895071.2| Sus scrofa unplaced genomic scaffold ChrUScaf2955 94 6e-16
Sscrofa_Chr05 94 6e-16
Sscrofa_Chr09 92 2e-15
Sscrofa_Chr15 84 5e-13
Sscrofa_Chr14 84 5e-13
Sscrofa_Chr02 82 2e-12
Sscrofa_Chr01 82 2e-12
gb|JH118966.1| Sus scrofa unplaced genomic scaffold ChrUScaf3798 80 9e-12
gb|GL893397.2| Sus scrofa unplaced genomic scaffold ChrUScaf1282 80 9e-12
>Sscrofa_Chr07
|| Length = 134764511
Score = 527 bits (266), Expect = e-146
Identities = 281/285 (98%), Gaps = 2/285 (0%)
Strand = Plus / Plus
Query: 1191 tcatcaattcattttgaggcctgatttaggagtctacaacggccttgtgttctctcagaa 1250
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 57474570 tcatcaattcattttgaggcctgatttaggagtctacaccggccttgtgttctctcagaa 57474629
Query: 1251 gagatggcaaggaccttctcatcttcaggggctttggacttctagcccctttggctgagg 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57474630 gagatggcaaggaccttctcatcttcaggggctttggacttctagcccctttggctgagg 57474689
Query: 1311 ccaggtcggagcctcttattgggccccagctagaataagtttatatgctttattcctttt 1370
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 57474690 ccaggtcggagcctcttattgggccccagttagaataagtttatatgctttattcctttt 57474749
Query: 1371 cttgggtcatcatttccccatcttttaaaataagaattaattttagaagaagtgttttca 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57474750 cttgggtcatcatttccccatcttttaaaataagaattaattttagaagaagtgttttca 57474809
Query: 1431 tggctcttggtgcccttttggtgccttttatattaaacctcctct 1475
||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 57474810 tggctcttggtgcccttttggtgcc--ttatattaaacctcctct 57474852
Score = 492 bits (248), Expect = e-136
Identities = 258/260 (99%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 263 taatagactttagatggagggcatgtaccaagaagagagcaaagaccaacgataactttt 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57464600 taatagactttagatggagggcatgtaccaagaagagagcaaagaccaacgataactttt 57464659
Query: 323 agtaccagaaatttgttttccaaacacctgctcttctcaccttcctgggatttgtcttcc 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57464660 agtaccagaaatttgttttccaaacacctgctcttctcaccttcctgggatttgtcttcc 57464719
Query: 383 tccgctttgaagtcctgacccccacccccttcttagctcagggccctctactggatagag 442
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 57464720 tccgctttgaagtcctgaccccta-ccccttcttagctcagggccctctactggatagag 57464778
Query: 443 acctgggctctgctcattctggggctgctgcagctgagagatcctggaccctgggataga 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57464779 acctgggctctgctcattctggggctgctgcagctgagagatcctggaccctgggataga 57464838
Query: 503 tgccggcagaagttaagaat 522
||||||||||||||||||||
Sbjct: 57464839 tgccggcagaagttaagaat 57464858
Score = 416 bits (210), Expect = e-113
Identities = 213/214 (99%)
Strand = Plus / Plus
Query: 878 ttaccaggaagagagtgaatatcaaagaacttttgtatcagaaacttatccgcatggcat 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57474257 ttaccaggaagagagtgaatatcaaagaacttttgtatcagaaacttatccgcatggcat 57474316
Query: 938 tatcagacacctgctcttcttacctttctggggcttgtctcctccactttgaagtcctga 997
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 57474317 tatcagacacctgctcttcttacttttctggggcttgtctcctccactttgaagtcctga 57474376
Query: 998 cccctaccccccttctccttagctcaggatggcatgtaagcctcaatggcctgactgtct 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57474377 cccctaccccccttctccttagctcaggatggcatgtaagcctcaatggcctgactgtct 57474436
Query: 1058 tggggtctcatgtctttggggctcctgtacatat 1091
||||||||||||||||||||||||||||||||||
Sbjct: 57474437 tggggtctcatgtctttggggctcctgtacatat 57474470
Score = 375 bits (189), Expect = e-100
Identities = 192/193 (99%)
Strand = Plus / Plus
Query: 2970 aaattatgagtatcagattaataggtactaccatgtataaaataaacagcaaagatttac 3029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57476341 aaattatgagtatcagattaataggtactaccatgtataaaataaacagcaaagatttac 57476400
Query: 3030 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagtata 3089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57476401 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagtata 57476460
Query: 3090 tatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacct 3149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57476461 tatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacct 57476520
Query: 3150 catttaaagattt 3162
|||||||| ||||
Sbjct: 57476521 catttaaaaattt 57476533
Score = 276 bits (139), Expect = 7e-71
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 1 cgcggagctccacgaagctggtgaggtggcacgtgaaggtgatgatgccctcggcacgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57441219 cgcggagctccacgaagctggtgaggtggcacgtgaaggtgatgatgccctcggcacgct 57441278
Query: 61 ttcagcctgcctggtgactgtgcaggaagagatgcagcgctgtctcttcagcccctttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57441279 ttcagcctgcctggtgactgtgcaggaagagatgcagcgctgtctcttcagcccctttga 57441338
Query: 121 cggggagctggtgacgggt 139
|||||||||||||||||||
Sbjct: 57441339 cggggagctggtgacgggt 57441357
Score = 258 bits (130), Expect = 2e-65
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 1591 tgaacctcctcgtttatgttatttcctctaaaccaagagtgttcatggaacacatgctat 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57474968 tgaacctcctcgtttatgttatttcctctaaaccaagagtgttcatggaacacatgctat 57475027
Query: 1651 gcacagaactagaaataaaaagtaaattaaatatgttcctactttctgggcattgaaaaa 1710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57475028 gcacagaactagaaataaaaagtaaattaaatatgttcctactttctgggcattgaaaaa 57475087
Query: 1711 cttatttgga 1720
||||||||||
Sbjct: 57475088 cttatttgga 57475097
Score = 83.8 bits (42), Expect = 5e-13
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 3086 tatatatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaactat 3145
|||||||| |||||||||||||| |||||| |||||||| |||||||||||| ||||||
Sbjct: 94667117 tatatatctgaatcactttgctgtatacctgaaactaacacaatactgtaaatcaactat 94667058
Query: 3146 acctca 3151
||||||
Sbjct: 94667057 acctca 94667052
Score = 81.8 bits (41), Expect = 2e-12
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 726 ctggatggtgaaacttcttggggatgcctcggggcaggatc 766
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 57474105 ctggatggtgaaacttcttggggatgcctcggggcaggatc 57474145
Score = 75.8 bits (38), Expect = 1e-10
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||||||| ||||||||| | |||| ||||||||| |||| |||||||
Sbjct: 19588411 gatttactgtatagcacagggaactatattcactgtcttgtaataaactatattggaaaa 19588470
Query: 3083 ga 3084
||
Sbjct: 19588471 ga 19588472
Score = 75.8 bits (38), Expect = 1e-10
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || |||||||| |||||||||||||||
Sbjct: 122677089 tactgtatagcacagggaactatattcaatatcctgtaataacatataatggaaaaga 122677032
Score = 75.8 bits (38), Expect = 1e-10
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || |||||||| |||||||||||||||
Sbjct: 122764187 tactgtatagcacagggaactatattcaatatcctgtaataacatataatggaaaaga 122764130
Score = 73.8 bits (37), Expect = 5e-10
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 944 acacctgctcttcttacctttctggggcttgtct-cctccactttgaagtcctgacccct 1002
|||||||||||||| ||||| ||||| |||||| ||||| |||||||||||||||||||
Sbjct: 57464683 acacctgctcttctcaccttcctgggatttgtcttcctccgctttgaagtcctgacccct 57464742
Query: 1003 acccc 1007
|||||
Sbjct: 57464743 acccc 57464747
Score = 71.9 bits (36), Expect = 2e-09
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| |||||||||||||||||||| | ||||||| ||| || ||||||||
Sbjct: 79867057 ataaacaacaaggatttactgtatagcacagggagctatattcaatatcttgtaataacc 79866998
Query: 3071 tataatggaaaa 3082
||||||||||||
Sbjct: 79866997 tataatggaaaa 79866986
Score = 71.9 bits (36), Expect = 2e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||| ||||||||| ||| || |||||||||| |||||||||||
Sbjct: 107652097 tactgtatagcacagggaactatattcaatatcctgtaataaaacataatggaaaa 107652042
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
||||| |||||||||| ||||||||||||| || ||| ||||| |||||||||||||||
Sbjct: 14584574 tactgaatagcacagggaactatattaaatatcctgtgataaaccataatggaaaagagt 14584633
Query: 3087 at 3088
||
Sbjct: 14584634 at 14584635
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||||| | | || ||||||||| ||||||||| ||||
Sbjct: 15974762 tactgtatagcacaggaaactatattcagtatcttgtaataaactataatggagaaga 15974705
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| | ||||||||| |||||| |||||||| ||||||||||||||
Sbjct: 26020346 tactgtatagcacaaggaactatattcaatgtcttgtaataatctataatggaaaaga 26020403
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| | ||||||||| |||||| |||||||| ||||||||||||||
Sbjct: 26268004 tactgtatagcacaaggaactatattcaatgtcttgtaataatctataatggaaaaga 26267947
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3086 tatatatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaactat 3145
|||||| |||||||||||||||||| || || |||||||| |||| ||||||| ||||||
Sbjct: 92695869 tatataaccaaatcactttgctgtgcacatgaaactaacacaatattgtaaatcaactat 92695928
Query: 3146 ac 3147
||
Sbjct: 92695929 ac 92695930
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 3029 ctgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 21166979 ctgtatagcacagggaactatattcaatatcctgtaataaaccataatggaaaaga 21167034
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 3029 ctgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 108944191 ctgtatagcacagggaactatattcaatatcctgtaataaaccataatggaaaaga 108944246
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 3025 tttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaag 3083
|||||||||||||||| | ||||||||| ||| || | ||||||| |||||||||||||
Sbjct: 7861492 tttactgtatagcacaaggaactatattcaatatcttataataaactataatggaaaag 7861434
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 3026 ttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||||||| |||||||||||| || ||| ||||| |||||||||||||
Sbjct: 90730131 ttactgtatagcacagggaactatattaaacatcctgtgataaatcataatggaaaaga 90730073
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaa 3081
|||||||||||||||| ||||||||| ||| || ||||||||| ||||||||||
Sbjct: 95326273 tactgtatagcacagggaactatattcaatatcctgtaataaaccataatggaaa 95326327
Score = 60.0 bits (30), Expect = 8e-06
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 3002 atgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaa 3055
|||||||||||||||| ||| || |||| ||||||||||| ||||||||||||
Sbjct: 4144201 atgtataaaataaacaacaaggacctactctatagcacagggaactatattaaa 4144254
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctcattta 3155
|||||||||||||| ||||| |||||||| |||| ||||||| |||||||| ||| |||
Sbjct: 7690025 aatcactttgctgtacacctgaaactaacacaatattgtaaatcaactatacttcagtta 7689966
Query: 3156 aa 3157
||
Sbjct: 7689965 aa 7689964
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||||||| |||||||| ||||||||| ||| || | ||||||| |||||||||||
Sbjct: 12429225 gatttactgtagagcacagggaactatattcaatatcttataataaacaataatggaaaa 12429284
Query: 3083 ga 3084
||
Sbjct: 12429285 ga 12429286
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| | |||||||| ||||||||||||||
Sbjct: 45076022 tactgtatagcacagggaactatattcaatattttgtaataatctataatggaaaaga 45075965
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||| ||||||||||| ||||||||| |||||| ||||| || ||||||||||||||
Sbjct: 52234460 tactatatagcacagggaactatattcaatgtcttgtaacaacctataatggaaaaga 52234517
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||| |||||||| ||||||||| ||| || |||||||| ||||||||||||||
Sbjct: 52276239 tactgtaaagcacagggaactatattcaatatcttgtaataacttataatggaaaaga 52276296
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||| || ||||||||| ||| ||||||||||| || |||||||||||
Sbjct: 52926992 tactgtatagcactgggaactatattcaatatcatgtaataacctacaatggaaaaga 52927049
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| | ||||||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 55323057 tactgtatagcacatggaactatattcaatatcatgaaataacctataatggaaaaga 55323114
Score = 60.0 bits (30), Expect = 8e-06
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 346 acacctgctcttctcaccttcctgggatttgtcttcctccgctttgaagtcctgaccccc 405
|||||||||||||| || || ||||| |||||| ||||| ||||||||||||||||||
Sbjct: 57474323 acacctgctcttcttacttttctggggcttgtct-cctccactttgaagtcctgacccct 57474381
Query: 406 accccc 411
||||||
Sbjct: 57474382 accccc 57474387
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||| ||||| |||||||||||||
Sbjct: 72473714 tactgtatagcacagggaactatattcaatatcctgtgataaaccataatggaaaaga 72473657
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||| ||||| ||| || |||||||| ||||||||||||||
Sbjct: 80822345 tactgtatagcacagggaaccatattcaatatcttgtaataatctataatggaaaaga 80822402
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||| |||||||||||||| ||| | ||||||||| || |||||||||||
Sbjct: 82972245 tactgtatagcgcaggaaactatattcaataccttgtaataaactacaatggaaaaga 82972188
Score = 60.0 bits (30), Expect = 8e-06
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatatt 3052
||||||| |||||||||||||||| ||||||| |||||||||
Sbjct: 93247013 ataaacaacaaagatttactgtatggcacagggaactatatt 93246972
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| || |||||||||||||||| ||||| ||| ||| || |||||||||
Sbjct: 95298275 ataaacaacaaggacttactgtatagcacagagaactacattcaatatcttgtaataaac 95298334
Query: 3071 tataatggaaaaga 3084
|||||||||||||
Sbjct: 95298335 cataatggaaaaga 95298348
Score = 60.0 bits (30), Expect = 8e-06
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 3029 ctgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||| ||||||||| ||| || ||| ||||| ||||||||||||
Sbjct: 99856551 ctgtatagcacagggaactatattcaatatcttgtgataaactataatggaaaa 99856498
Score = 60.0 bits (30), Expect = 8e-06
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaa 3080
|||||||||||||||| ||||||||| ||| || ||||||||| |||||||||
Sbjct: 120428277 tactgtatagcacagggaactatattcaatatcctgtaataaaccataatggaa 120428330
Score = 60.0 bits (30), Expect = 8e-06
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 3005 tataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgta 3064
||||||||||||| || | |||||||| |||||||||| ||||||||| ||| || | |
Sbjct: 134063365 tataaaataaacaacagaaatttactgcatagcacagggaactatattcaatatcttaca 134063306
Query: 3065 ataaaatataatggaaaa 3082
|||| ||||||||||||
Sbjct: 134063305 ataacctataatggaaaa 134063288
>gb|GL895071.2| Sus scrofa unplaced genomic scaffold ChrUScaf2955
Length = 67393
Score = 93.7 bits (47), Expect = 6e-16
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 2996 actaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaa 3055
|||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 65843 actaccatttataaaataaacagcaaagatttactgtataacacagggaactatattcaa 65784
Query: 3056 tgtcatgtaataaaatataatggaaaa 3082
| | |||||||| ||||||| ||||
Sbjct: 65783 tattttgtaataacctataatgaaaaa 65757
>Sscrofa_Chr05
|| Length = 111506441
Score = 93.7 bits (47), Expect = 6e-16
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 3006 ataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaa 3065
|||||||||||| |||||| ||||||||||||||||| ||||||||| ||| || |||||
Sbjct: 45344510 ataaaataaacaacaaagacttactgtatagcacagggaactatattcaatatcttgtaa 45344569
Query: 3066 taaaatataatggaaaaga 3084
||| ||||||||||||||
Sbjct: 45344570 taacctataatggaaaaga 45344588
Score = 81.8 bits (41), Expect = 2e-12
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| |||||||||||||||||||||||||||||| ||| || | ||||||
Sbjct: 87701172 ataaacaacaaggatttactgtatagcacaggaaactatattcaatatcttataataacc 87701113
Query: 3071 tataatggaaaag 3083
|||||||||||||
Sbjct: 87701112 tataatggaaaag 87701100
Score = 75.8 bits (38), Expect = 1e-10
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 2995 tactaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaa 3054
|||||| || ||||||||||||||||| || |||||||||||||||| ||||||||| |
Sbjct: 59785732 tactactatatataaaataaacagcaaggacctactgtatagcacagggaactatattta 59785791
Query: 3055 atgtcatgtaataaaatataatggaaaaga 3084
|| || | ||||| ||||||||||||||
Sbjct: 59785792 atatctttcaataacctataatggaaaaga 59785821
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||||||||||||||||||| |||||| |||||| |||||||| | ||||||||||
Sbjct: 55320341 gatttactgtatagcacaggaaattatattcaatgtcttgtaataacctgtaatggaaaa 55320282
Score = 69.9 bits (35), Expect = 8e-09
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaa 3081
|||||||||||||||||||||||||| |||||| |||||||| |||||| ||||
Sbjct: 56935435 tactgtatagcacaggaaactatattcaatgtcttgtaataacctataatagaaa 56935489
Score = 69.9 bits (35), Expect = 8e-09
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||||| |||||| ||| ||||||||| ||| || ||||||||| ||||||||||||
Sbjct: 73938615 gatttactgaatagcagagggaactatattcaatatcttgtaataaactataatggaaaa 73938674
Query: 3083 gagtata 3089
|| ||||
Sbjct: 73938675 gaatata 73938681
Score = 69.9 bits (35), Expect = 8e-09
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 3030 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||||
Sbjct: 91932429 tgtatagcacaggaaactatattcaatatcttgtcataaactataatggaaaaga 91932483
Score = 67.9 bits (34), Expect = 3e-08
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 2995 tactaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaa 3054
||||||| ||||||||||||||||||| |||||| | || |||||| ||||||||| |
Sbjct: 14724382 tactaccctgtataaaataaacagcaagcatttaccatttaacacaggcaactatattca 14724441
Query: 3055 atgtcatgtaataaaatataatggaaaaga 3084
| || |||||||| ||||||||||||||
Sbjct: 14724442 gtatcttgtaataacctataatggaaaaga 14724471
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| |||||| ||||||||| | |||||||||||
Sbjct: 17200762 tactgtatagcacagggaactatattcaatgtcgtgtaataaaccacaatggaaaaga 17200819
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3028 actgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagta 3087
||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||| ||
Sbjct: 36029951 actgtatagcacaggaaactatattcaatatcctgtgataaaccataatggaaaagaata 36030010
Query: 3088 ta 3089
||
Sbjct: 36030011 ta 36030012
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||||||| |||||||| ||| || |||||||| ||||||||||||
Sbjct: 97695724 gatttactgtatagcacagggaactatatgcaatatcttgtaataacctataatggaaaa 97695665
Query: 3083 ga 3084
||
Sbjct: 97695664 ga 97695663
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 3025 tttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||||| || ||||||||| | |||| |||||||| ||||||||||||||
Sbjct: 16743838 tttactgtatagcactgggaactatattcagtgtcttgtaataacctataatggaaaaga 16743779
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 3025 tttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||||| || ||||||||| | |||| |||||||| ||||||||||||||
Sbjct: 17003503 tttactgtatagcactgggaactatattcagtgtcttgtaataacctataatggaaaaga 17003562
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||||||| |||||||| || |||||| ||| || ||||||||| ||||||||||||
Sbjct: 21917750 gatttactgtaaagcacagggaattatattcaatatcttgtaataaactataatggaaaa 21917809
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||||||| |||||||| || |||||| ||| || ||||||||| ||||||||||||
Sbjct: 22121280 gatttactgtaaagcacagggaattatattcaatatcttgtaataaactataatggaaaa 22121339
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||||||||||||| | | | |||||||| |||||||||||||
Sbjct: 22153558 tactgtatagcacaggaaactatattcagtatgttgtaataacatataatggaaaa 22153613
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3029 ctgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| ||||||||| ||| || |||||||| ||||||||||||||
Sbjct: 78219658 ctgtatagcacagggaactatatttaatatcttgtaataacctataatggaaaaga 78219603
Score = 63.9 bits (32), Expect = 5e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
||||||||||||| |||||||||||||| |||||||||||| ||||||||
Sbjct: 91404517 aatcactttgctgcacacctgcaactaacacaatactgtaaatcaactatac 91404466
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 3006 ataaaataaacagcaaagatttactgtatagcacaggaaactatatt 3052
|||||||||| | | | ||||||||||||||||||||||||||||||
Sbjct: 23710974 ataaaataaaaaacgaggatttactgtatagcacaggaaactatatt 23711020
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaa 3081
|||||||||||||||| ||||||||| ||| || |||||||| |||||||||||
Sbjct: 27413752 tactgtatagcacagggaactatatttaatatcttgtaataacctataatggaaa 27413698
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaa 3081
|||||||||||||||| ||||||||| ||| || |||||||| |||||||||||
Sbjct: 27637165 tactgtatagcacagggaactatatttaatatcttgtaataacctataatggaaa 27637219
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaa 3069
|||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 35740118 tactgtatagcacaggaaactatattcaatatcctgtaataaa 35740076
Score = 61.9 bits (31), Expect = 2e-06
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
||||||| |||||||| ||||||||| ||||| ||||||||| ||||||||||||| |
Sbjct: 47636504 tactgtacagcacagggaactatattcaatgttctgtaataaaccataatggaaaagaat 47636563
Query: 3087 ata 3089
|||
Sbjct: 47636564 ata 47636566
Score = 61.9 bits (31), Expect = 2e-06
Identities = 55/62 (88%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||| |||||||||||||||||| |||| ||| || ||||||||| ||||||||||||
Sbjct: 59851469 gatttgctgtatagcacaggaaac--tattcaatatcttgtaataaactataatggaaaa 59851526
Query: 3083 ga 3084
||
Sbjct: 59851527 ga 59851528
Score = 61.9 bits (31), Expect = 2e-06
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 3005 tataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgta 3064
||||||||| | | ||||| ||||||||||||||||||||||||||| ||| || | |
Sbjct: 64093632 tataaaatagataacaaagtcttactgtatagcacaggaaactatattcaatatcttaca 64093573
Query: 3065 ataaaatataatggaaaag 3083
|||| |||||||||||||
Sbjct: 64093572 ttaaactataatggaaaag 64093554
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 3099 cactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctcatttaaa 3157
||||||||||| |||||| |||||||| || ||||||||| |||||||| ||| |||||
Sbjct: 72104955 cactttgctgtatacctgaaactaacacaacactgtaaatcaactatacttcaattaaa 72105013
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactata 3146
|||||| ||||||| |||||| |||||||| |||||||||||| |||||||
Sbjct: 79585208 aatcaccttgctgtatacctgaaactaacacaatactgtaaatcaactata 79585158
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||| ||| ||||||||||||| || || ||||| ||||||||||||||
Sbjct: 34171946 tactgtatagcagagggaactatattaaatatcttgcaataacctataatggaaaaga 34172003
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||| ||||| |||||||||||||
Sbjct: 34232211 tactgtatagcacagggaactatattcaatatcctgtgataaaccataatggaaaaga 34232268
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||||||||||||| || | | || |||||||| ||||||||||||||
Sbjct: 34862685 tactgtatagcacaggaaactatgttcagtatcttgtaataacttataatggaaaaga 34862628
Score = 60.0 bits (30), Expect = 8e-06
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 3098 tcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
|||||||||||| |||||| |||||||| |||| ||||||| ||||||||
Sbjct: 35598603 tcactttgctgtatacctgaaactaacacaatattgtaaatcaactatac 35598554
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||| |||| ||||||||| ||| || ||| ||||| ||||||||||||||
Sbjct: 54249001 tactgtatagcccagggaactatattcaatatcctgtgataaactataatggaaaaga 54249058
Score = 60.0 bits (30), Expect = 8e-06
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 3098 tcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
|||||||||||| |||||| |||||||| |||||||||| | ||||||||
Sbjct: 63877301 tcactttgctgtatacctgaaactaacacaatactgtaagtcaactatac 63877350
Score = 60.0 bits (30), Expect = 8e-06
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaa 3080
|||||||||||||||||||||| ||| ||| || ||||||||| |||||||||
Sbjct: 66342643 tactgtatagcacaggaaactagattcaatatcctgtaataaatcataatggaa 66342696
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctcattta 3155
|||||||||||||| |||| | |||||||| |||| ||||||| |||||||| ||| |||
Sbjct: 66896708 aatcactttgctgtataccagaaactaacacaatattgtaaatcaactatacttcaatta 66896767
Query: 3156 aa 3157
||
Sbjct: 66896768 aa 66896769
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctcattta 3155
|||||||||||||| |||| | |||||||| |||| ||||||| |||||||| ||| |||
Sbjct: 66992676 aatcactttgctgtataccagaaactaacacaatattgtaaatcaactatacttcaatta 66992735
Query: 3156 aa 3157
||
Sbjct: 66992736 aa 66992737
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||||||||| |||||||| ||| || |||| |||| |||||||||||||||
Sbjct: 78611988 tactgtatagcacaggggactatatttaatatcctgtagtaaaccataatggaaaagagt 78611929
Query: 3087 at 3088
||
Sbjct: 78611928 at 78611927
Score = 60.0 bits (30), Expect = 8e-06
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 3028 actgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaa 3081
||||||||||||||| ||||||| | ||| || ||||||||| |||||||||||
Sbjct: 83894780 actgtatagcacaggcaactatacttaatatcttgtaataaactataatggaaa 83894727
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||| | ||| || |||||||| ||||||||||||||
Sbjct: 89447481 tactgtatagcacagggaactatactcaatatcttgtaataacctataatggaaaaga 89447538
>Sscrofa_Chr09
|| Length = 153670197
Score = 91.7 bits (46), Expect = 2e-15
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 3019 caaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatgg 3078
|||||||||||||||||||||||| |||| |||||||| || ||||||||| ||||||||
Sbjct: 42264041 caaagatttactgtatagcacagggaactgtattaaatatcttgtaataaactataatgg 42264100
Query: 3079 aaaaga 3084
||||||
Sbjct: 42264101 aaaaga 42264106
Score = 87.7 bits (44), Expect = 3e-14
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatgg 3078
|||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||
Sbjct: 73115936 gatttactgtatagcacaggaaactatattcaatgtcttgtaataaactataatgg 73115881
Score = 83.8 bits (42), Expect = 5e-13
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 2999 accatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgt 3058
||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||| || |
Sbjct: 48828771 accatctataaaataaacaacaaagatctactgtatagcacagggaactatattcaacat 48828712
Query: 3059 catgtaataaaatataatggaaaaga 3084
| ||||||| ||||||||||||||
Sbjct: 48828711 ctcgtaataacctataatggaaaaga 48828686
Score = 77.8 bits (39), Expect = 3e-11
Identities = 102/123 (82%)
Strand = Plus / Minus
Query: 3025 tttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||||| ||||||||||| ||| || |||||||| || |||||||||||
Sbjct: 126450714 tttactgtatagcaccagaaactatattcaatatcttgtaataacctacaatggaaaaga 126450655
Query: 3085 gtatatatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaacta 3144
|||||||| || ||||||||| | ||||| ||| |||| |||| | ||||| |||||
Sbjct: 126450654 atatatatctgaaccactttgctatacacctgaaaccaacaaaatattataaatcaacta 126450595
Query: 3145 tac 3147
|||
Sbjct: 126450594 tac 126450592
Score = 75.8 bits (38), Expect = 1e-10
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||||||||| ||||||||| ||| || ||| ||||| |||||||||||||| |
Sbjct: 31374234 tactgtatagcacagggaactatattcaatatcttgtgataaactataatggaaaagaat 31374175
Query: 3087 atatat 3092
||||||
Sbjct: 31374174 atatat 31374169
Score = 75.8 bits (38), Expect = 1e-10
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||||| ||| || |||||||| |||||||||| ||||
Sbjct: 110755789 tactgtatagcacaggaaactatattcaatatcttgtaataacatataatggataaga 110755732
Score = 71.9 bits (36), Expect = 2e-09
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 3005 tataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgta 3064
||||||||||||| ||| || |||||||||||||||| ||||||||| ||| || ||||
Sbjct: 28426636 tataaaataaacaacaaggacctactgtatagcacagggaactatattcaatatcttgta 28426695
Query: 3065 ataaaatataatggaaaaga 3084
||||| ||||||| |||||
Sbjct: 28426696 ataaaccataatggcaaaga 28426715
Score = 69.9 bits (35), Expect = 8e-09
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 3002 atgtataaaataaacagcaaagatttactgtatagcacaggaaactatatt 3052
|||||||||||||||| ||| |||||||||||||||||||| || ||||||
Sbjct: 129725702 atgtataaaataaacaacaaggatttactgtatagcacagggaagtatatt 129725652
Score = 69.9 bits (35), Expect = 8e-09
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 3006 ataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaa 3065
|||||||||||| ||| ||||| ||||||||||| || ||| ||||| ||| || |||||
Sbjct: 131542534 ataaaataaacaacaaggatttgctgtatagcaccgggaaccatattcaatatcttgtaa 131542593
Query: 3066 taaaatataatggaaaaga 3084
||| ||||||||||||||
Sbjct: 131542594 taacctataatggaaaaga 131542612
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 31438702 tactgtatagcacaggtaactatattcaatatcttgtaataaaccataatggaaaaga 31438645
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 31586066 tactgtatagcacaggtaactatattcaatatcttgtaataaaccataatggaaaaga 31586123
Score = 67.9 bits (34), Expect = 3e-08
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 3031 gtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||| ||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 81419237 gtatagcacagggaactatagtcaatgtcctgtaataaactataatggaaaaga 81419290
Score = 67.9 bits (34), Expect = 3e-08
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 3003 tgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatg 3062
||||||||||||||| | ||||||||||| ||||||| ||||||||| | | || ||
Sbjct: 102235807 tgtataaaataaacaatgataatttactgtat-gcacaggtaactatattcagtatcgtg 102235865
Query: 3063 taataaaatataatggaaaaga 3084
||||||||||||||||||||||
Sbjct: 102235866 taataaaatataatggaaaaga 102235887
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctcattta 3155
|||||||||||||| |||||||||| |||| |||| ||||||| |||||||| ||| |||
Sbjct: 121439391 aatcactttgctgtatacctgcaacaaacacaatattgtaaatcaactatacttcaatta 121439450
Query: 3156 aa 3157
||
Sbjct: 121439451 aa 121439452
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| | ||||||||||| || |||||||| ||||||||||||||
Sbjct: 144989575 tactgtatagcacagggagctatattaaatatcttgtaataacctataatggaaaaga 144989632
Score = 65.9 bits (33), Expect = 1e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 2996 actaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatatt 3052
||||| || |||||||||||| |||||| ||||||||||||||||| |||||||||
Sbjct: 23870585 actactatatataaaataaaccacaaagacttactgtatagcacagggaactatatt 23870641
Score = 65.9 bits (33), Expect = 1e-07
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 3028 actgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||||
Sbjct: 46331376 actgtatagcacagggaactatattcaatatcttgtaataatctataatggaaaaga 46331320
Score = 65.9 bits (33), Expect = 1e-07
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 3031 gtatagcacaggaaactatattaaatgtcatgtaataaaatataa 3075
|||||||||||| ||||||||| ||||||||||||||| ||||||
Sbjct: 127915914 gtatagcacagggaactatattcaatgtcatgtaataatatataa 127915958
Score = 63.9 bits (32), Expect = 5e-07
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1008 ccttctccttagctcaggatggcatgtaagcctcaatggcctga 1051
|||||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 3409430 ccttctccttagctcaggatggtacgtaagcctcaattgcctga 3409387
Score = 63.9 bits (32), Expect = 5e-07
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| ||||| |||||||||||||| ||||| | | ||| |||||||||||
Sbjct: 83478283 ataaacaacaaggattttctgtatagcacagggaactaaaatcaatatcatgtaataacc 83478342
Query: 3071 tataatggaaaa 3082
||||||||||||
Sbjct: 83478343 tataatggaaaa 83478354
Score = 63.9 bits (32), Expect = 5e-07
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| ||||| |||||||||||||| ||||| | | ||| |||||||||||
Sbjct: 83619955 ataaacaacaaggattttctgtatagcacagggaactaaaatcaatatcatgtaataacc 83620014
Query: 3071 tataatggaaaa 3082
||||||||||||
Sbjct: 83620015 tataatggaaaa 83620026
Score = 63.9 bits (32), Expect = 5e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 3033 atagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||| ||||||||| |||||| ||||||||| |||||||||||||
Sbjct: 99324085 atagcacagggaactatattcaatgtcctgtaataaaccataatggaaaaga 99324034
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 3030 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||| || ||||||||||||| ||| || ||||||||| ||||||||||||||
Sbjct: 25229346 tgtataacaaaggaaactatattcaatatcctgtaataaactataatggaaaaga 25229292
Score = 61.9 bits (31), Expect = 2e-06
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||||||||| ||||||||| ||| || ||| ||||| ||||||||||||| |
Sbjct: 77294617 tactgtatagcacagggaactatattcaatatcctgtgataaaccataatggaaaagaat 77294558
Query: 3087 ata 3089
|||
Sbjct: 77294557 ata 77294555
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 3030 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||| ||||||||| |||||| |||||||| |||| |||||||||
Sbjct: 97827764 tgtatagcacagggaactatattcaatgtcttgtaataacctatattggaaaaga 97827818
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 3030 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||| ||||||||||||| | |||||||| ||||||||||||||
Sbjct: 121087444 tgtatagcacagggaactatattaaatcccttgtaataacctataatggaaaaga 121087498
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 3026 ttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||| |||||| ||||||||||||| || ||| ||||| |||||||||||||
Sbjct: 127939616 ttactgtataacacagggaactatattaaatatcctgtgataaaccataatggaaaaga 127939558
Score = 61.9 bits (31), Expect = 2e-06
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaa 3069
|||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 144788518 tactgtatagcacaggaaactatattcaatatcctgtaataaa 144788476
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 2995 tactaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatatt 3052
|||||| || |||||||||||||| || |||||||| |||||||||| |||||||||
Sbjct: 19397805 tactactatatataaaataaacagtaagcatttactgaatagcacagggaactatatt 19397862
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3030 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagtata 3089
||||||||||||| ||||||||| ||| || ||||||||| |||||| |||||| ||||
Sbjct: 22221949 tgtatagcacagggaactatattcaatatcctgtaataaaccataatgaaaaagaatata 22222008
Query: 3090 ta 3091
||
Sbjct: 22222009 ta 22222010
Score = 60.0 bits (30), Expect = 8e-06
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatatt 3052
||||||||||||||||||||||||||||||
Sbjct: 22981544 gatttactgtatagcacaggaaactatatt 22981515
Score = 60.0 bits (30), Expect = 8e-06
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 3007 taaaataaacagcaaagatttactgtatagcacaggaaactatatt 3052
||||||||||| ||| ||||||||||||| |||||| |||||||||
Sbjct: 37415752 taaaataaacaacaaggatttactgtataacacagggaactatatt 37415797
Score = 60.0 bits (30), Expect = 8e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataa 3068
|||||||||||||||| ||||||||| |||||| ||||||||
Sbjct: 41823760 tactgtatagcacagggaactatattcaatgtcttgtaataa 41823801
Score = 60.0 bits (30), Expect = 8e-06
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||||||||| ||||||||| ||| || | | ||||| ||||||||||||| |
Sbjct: 41889125 tactgtatagcacagggaactatattcaatatcctatgataaaccataatggaaaagaat 41889184
Query: 3087 atatat 3092
||||||
Sbjct: 41889185 atatat 41889190
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||| ||||||||| ||||||||| ||| || | |||||| |||||||||||||||
Sbjct: 50330634 tactgtgtagcacagggaactatattcaatatcttataataacatataatggaaaaga 50330577
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| |||||||| |||||| |||||||| |||||| |||||||
Sbjct: 53622921 tactgtatagcacaggggactatattcaatgtcttgtaataacctataatagaaaaga 53622864
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| |||||||||| || |||||| |||||||| ||| || ||||||||
Sbjct: 65120096 ataaacaacaaggatttactgtctaacacaggggactatattcaatatcttgtaataacc 65120037
Query: 3071 tataatggaaaaga 3084
||||||||||||||
Sbjct: 65120036 tataatggaaaaga 65120023
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 2996 actaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaa 3055
||||| |||||||||||||||| ||||| ||||||| ||||||| |||||||||| ||
Sbjct: 72065038 actactatgtataaaataaacaacaaagtcctactgtagagcacagaaaactatatttaa 72065097
Query: 3056 tg 3057
||
Sbjct: 72065098 tg 72065099
Score = 60.0 bits (30), Expect = 8e-06
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||| ||||||||||||||||||||| ||| | | | ||||| |||||||||||||| |
Sbjct: 73157443 tactatatagcacaggaaactatattcaataacctatgataaattataatggaaaagaat 73157384
Query: 3087 atatat 3092
||||||
Sbjct: 73157383 atatat 73157378
Score = 60.0 bits (30), Expect = 8e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataa 3068
||||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 91658902 tactgtataccacaggaaactatattcaatgtcttgtaataa 91658943
Score = 60.0 bits (30), Expect = 8e-06
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||| ||||| | ||||||||| ||| || ||||||||| ||||||||||||
Sbjct: 102328790 gatttactgtat-gcacaaggaactatattcaatatcttgtaataaactataatggaaaa 102328732
Query: 3083 ga 3084
||
Sbjct: 102328731 ga 102328730
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||| ||| ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 106809685 tactgtatagcatagggaactatattcaatatcctgtaataaaccataatggaaaaga 106809742
Score = 60.0 bits (30), Expect = 8e-06
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataa 3068
|||||||||||||||||||| |||| |||||||| || ||||||||
Sbjct: 133891648 gatttactgtatagcacagggaactgtattaaatatcttgtaataa 133891603
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||||||||| |||||| ||||||
Sbjct: 136934364 tactgtatagcacagggaactatattcaatatcctgtaataaaccataatgaaaaaga 136934421
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||| | | |||| ||||||||| |||||||||||||
Sbjct: 153473951 tactgtatagcacagggaactatagttagtgtcctgtaataaaccataatggaaaaga 153473894
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||| | | |||| ||||||||| |||||||||||||
Sbjct: 153646923 tactgtatagcacagggaactatagttagtgtcctgtaataaaccataatggaaaaga 153646980
>Sscrofa_Chr15
|| Length = 157681621
Score = 83.8 bits (42), Expect = 5e-13
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| |||||||||||||||||||| || |||||| ||| || ||||||||||
Sbjct: 41094602 ataaacaacaaggatttactgtatagcacagggaattatattcaatatcttgtaataaaa 41094661
Query: 3071 tataatggaaaaga 3084
|| |||||||||||
Sbjct: 41094662 tagaatggaaaaga 41094675
Score = 77.8 bits (39), Expect = 3e-11
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 3026 ttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||||||| ||||||||| | |||||||||||||| |||||||||||||
Sbjct: 121455745 ttactgtatagcacagggaactatattcagtgtcatgtaataaaccataatggaaaaga 121455803
Score = 73.8 bits (37), Expect = 5e-10
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 2996 actaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaa 3055
||||| || ||||||||||||| |||||| |||||||| ||||||||||||| ||||||
Sbjct: 59502900 actactatatataaaataaacaacaaagacctactgtattgcacaggaaactaaattaaa 59502841
Query: 3056 tgtcatgtaataaaatataatggaaaaga 3084
| || | |||||| |||||| |||||||
Sbjct: 59502840 tatcttttaataacctataatagaaaaga 59502812
Score = 71.9 bits (36), Expect = 2e-09
Identities = 79/93 (84%), Gaps = 4/93 (4%)
Strand = Plus / Minus
Query: 2996 actaccatgtataaaa----taaacagcaaagatttactgtatagcacaggaaactatat 3051
|||||||||||||||| |||||||||| ||||| ||||||||||||| ||||||||
Sbjct: 112164483 actaccatgtataaaagagataaacagcaaggatttgttgtatagcacagggaactatat 112164424
Query: 3052 taaatgtcatgtaataaaatataatggaaaaga 3084
| ||| || | |||||| ||||||||||||||
Sbjct: 112164423 ttaatatcttataataacctataatggaaaaga 112164391
Score = 69.9 bits (35), Expect = 8e-09
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||||||| || ||||| |||||| | ||||||| ||||||||||||
Sbjct: 89522941 gatttactgtatagcacagggaataatatttaatgtcttataataaactataatggaaaa 89523000
Query: 3083 gagtata 3089
|| ||||
Sbjct: 89523001 gaatata 89523007
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||||| ||| || | ||||||| |||||||||||||
Sbjct: 22482077 tactgtatagcacaggaaactatattcaatatcctataataaaccataatggaaaaga 22482134
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||||| ||| || ||| ||||| | ||||||||||||
Sbjct: 89842567 tactgtatagcacaggaaactatattcaatatcctgtgataaactgtaatggaaaaga 89842624
Score = 67.9 bits (34), Expect = 3e-08
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| ||||||||||||| |||||| ||||||||| || || ||| |||||
Sbjct: 120949251 ataaacaacaaggatttactgtataacacagggaactatattcaacatcttgtgataaac 120949192
Query: 3071 tataatggaaaaga 3084
||||||||||||||
Sbjct: 120949191 tataatggaaaaga 120949178
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||||
Sbjct: 156404083 tactgtatagcacagggaactatattcaatatcttgtaataacctataatggaaaaga 156404140
Score = 65.9 bits (33), Expect = 1e-07
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 3008 aaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaata 3067
|||||||||| ||||| ||||||||||||||||| ||||||||| ||| || |||||||
Sbjct: 58081207 aaaataaacaacaaagtcttactgtatagcacagggaactatattcaatatcttgtaata 58081266
Query: 3068 a 3068
|
Sbjct: 58081267 a 58081267
Score = 65.9 bits (33), Expect = 1e-07
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaacta 3144
|||||||||||||| |||||| |||||||| |||||||||||| |||||
Sbjct: 75590633 aatcactttgctgtatacctgaaactaacacaatactgtaaatcaacta 75590585
Score = 63.9 bits (32), Expect = 5e-07
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 3006 ataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaa 3065
|||||||||||| |||| |||||||||||||||| ||||||||| ||| || |||||
Sbjct: 15151483 ataaaataaacaaaaaagtcctactgtatagcacagggaactatattcaatatcctgtaa 15151542
Query: 3066 taaaatataatggaaa 3081
|||| ||||||||||
Sbjct: 15151543 taaaccataatggaaa 15151558
Score = 63.9 bits (32), Expect = 5e-07
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| || ||||||||||||||||||||||||||| ||| || | | |||||
Sbjct: 49686540 ataaacaacaaggaattactgtatagcacaggaaactatattcaatatcctatcataaat 49686599
Query: 3071 tataatggaaaa 3082
| ||||||||||
Sbjct: 49686600 tgtaatggaaaa 49686611
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||| ||||||||| ||| || ||||||||| ||||||| ||||
Sbjct: 57501294 tactgtatagcacagggaactatattcaatatcgtgtaataaactataatgtaaaa 57501239
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||||||||||||| ||| | ||||||||| |||||||||||
Sbjct: 130593568 tactgtatagcacaggaaactatattcaatattctgtaataaatcataatggaaaa 130593513
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 3088 tatatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaactata 3146
|||| ||||||||||||||||| |||||| |||||| | |||| ||||||| |||||||
Sbjct: 72375801 tataaccaaatcactttgctgtatacctgaaactaatacaatattgtaaatcaactata 72375743
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 3097 atcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctca 3151
|||||||||||||||||| | ||||| || || ||||||||| ||||||||||||
Sbjct: 75689688 atcactttgctgtgtaccagaaactagcacaacactgtaaatcaactatacctca 75689742
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactata 3146
|||| ||||||||| |||||||||||||| |||||||||||| |||||||
Sbjct: 120948991 aatcgctttgctgtacacctgcaactaacacaatactgtaaatcaactata 120948941
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 3021 aagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatgga 3079
|||||||||||||||||||||| ||||||||| ||| | |||||||| |||||||||
Sbjct: 142930237 aagatttactgtatagcacagggaactatattcaataacttgtaataacctataatgga 142930179
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||||| || | ||||||||| |||||||||||||
Sbjct: 18012508 tactgtatagcacaggaaactatattcaacaccctgtaataaaccataatggaaaaga 18012451
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 3009 aaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataa 3068
||||||||| ||| |||||||| ||||||||||| ||||||||| ||| | | ||||||
Sbjct: 23317839 aaataaacaacaaggatttactatatagcacagggaactatattcaataccttttaataa 23317898
Query: 3069 aatataatggaaaa 3082
| | ||||||||||
Sbjct: 23317899 actgtaatggaaaa 23317912
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||||| | ||||||| |||||||| ||||||||| ||| | |||||||||
Sbjct: 24243855 ataaacaacaaagttctactgtacagcacagggaactatattcaataccctgtaataaac 24243796
Query: 3071 tataatggaaaaga 3084
|||||||||||||
Sbjct: 24243795 cataatggaaaaga 24243782
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||||| | ||||||| |||||||| ||||||||| ||| | |||||||||
Sbjct: 24329232 ataaacaacaaagttctactgtacagcacagggaactatattcaataccctgtaataaac 24329173
Query: 3071 tataatggaaaaga 3084
|||||||||||||
Sbjct: 24329172 cataatggaaaaga 24329159
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||| | ||| || ||| ||||| ||||||||||||||
Sbjct: 34523980 tactgtatagcacaggtaactatactcaatatcctgtgataaactataatggaaaaga 34524037
Score = 60.0 bits (30), Expect = 8e-06
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1005 cccccttctccttagctcaggatggcatgtaagcctca 1042
||||||||||||||||| |||||||||| |||||||||
Sbjct: 57783453 cccccttctccttagctgaggatggcatataagcctca 57783490
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| |||||||| ||| || ||||||||| ||||||| ||||||
Sbjct: 64690001 tactgtatagcacaggggactatattcaatatcctgtaataaactataatgaaaaaga 64690058
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||| ||| ||||||||||||| || | |||||| ||||||||||||||
Sbjct: 65981967 tactgtatagcatagggaactatattaaatatcttctaataacctataatggaaaaga 65982024
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| ||| ||||||| |||||||| ||||||||| |||||| | ||| ||
Sbjct: 87113560 ataaacaacaaggatctactgtacagcacagggaactatattcaatgtcttataagaacc 87113501
Query: 3071 tataatggaaaaga 3084
||||||||||||||
Sbjct: 87113500 tataatggaaaaga 87113487
Score = 60.0 bits (30), Expect = 8e-06
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 3098 tcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
|||||||||||| |||||| |||||||| |||| ||||||| ||||||||
Sbjct: 96717668 tcactttgctgtatacctgaaactaacacaatattgtaaatcaactatac 96717619
Score = 60.0 bits (30), Expect = 8e-06
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 3007 taaaataaacagcaaagatttactgtatagcacaggaaactatatt 3052
||||||||||| ||| |||||| ||||||||||||| |||||||||
Sbjct: 96717799 taaaataaacaacaaggatttattgtatagcacagggaactatatt 96717754
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| | ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 103811068 tactgtatagcacaaggaactatattcaatatcctgtaataaaccataatggaaaaga 103811011
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3025 tttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||||| ||||||||| ||| || |||| |||| ||||||| ||||
Sbjct: 107083502 tttactgtatagcacagggaactatattcaatatcttgtactaaactataatgaaaaa 107083559
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||| ||||||||||||||||||| | ||| || |||||||| ||||||||||||||
Sbjct: 116421817 tactatatagcacaggaaactatactcaatatcttgtaataacctataatggaaaaga 116421874
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||| ||| || |||||||| ||||||||||||||
Sbjct: 130575301 tactgtatagcacaggaaactatacccaatatcttgtaataacctataatggaaaaga 130575358
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
|||||||||||||| |||| ||||||| |||| |||||||| ||| || |||||||||
Sbjct: 132732174 ataaacagcaaagacttacggtatagctcagggaactatatataatatcttgtaataaac 132732233
Query: 3071 tataatggaaaaga 3084
|||| ||||||||
Sbjct: 132732234 cataaaggaaaaga 132732247
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || |||| ||| ||||||||||||||
Sbjct: 156843348 tactgtatagcacagggaactatattcaatatcttgtagtaacttataatggaaaaga 156843291
>Sscrofa_Chr14
|| Length = 153851969
Score = 83.8 bits (42), Expect = 5e-13
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 3015 acagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatata 3074
||||||| |||||||||||||||||||||||||||||| ||| || ||| |||| ||||
Sbjct: 96593184 acagcaaggatttactgtatagcacaggaaactatatttaatatcttgtcataacctata 96593243
Query: 3075 atggaaaaga 3084
||||||||||
Sbjct: 96593244 atggaaaaga 96593253
Score = 77.8 bits (39), Expect = 3e-11
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 3028 actgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||||||||||||| ||||||||||| || || |||||||||||||||||||
Sbjct: 23081864 actgtatagcacaggaagctatattaaatatcttgaaataaaatataatggaaaa 23081918
Score = 75.8 bits (38), Expect = 1e-10
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||||||| || |||||||| ||||||||||||||
Sbjct: 85641851 tactgtatagcacagggaactatattaaatatcttgtaataacctataatggaaaaga 85641794
Score = 75.8 bits (38), Expect = 1e-10
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 3009 aaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataa 3068
||||||||||||| |||||||||||||||||||| |||| || | ||| || |||||||
Sbjct: 93812422 aaataaacagcaaggatttactgtatagcacagggaactgtactcaatatccagtaataa 93812481
Query: 3069 aatataatggaaaa 3082
| ||||||||||||
Sbjct: 93812482 actataatggaaaa 93812495
Score = 73.8 bits (37), Expect = 5e-10
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 3024 atttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaag 3083
||||||||||||||||||| ||||||| | ||| || ||||||||| |||||||||||||
Sbjct: 56645065 atttactgtatagcacagggaactatagtcaatatcttgtaataaactataatggaaaag 56645006
Query: 3084 a 3084
|
Sbjct: 56645005 a 56645005
Score = 73.8 bits (37), Expect = 5e-10
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 3008 aaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaata 3067
|||||||||| ||||| ||||||||||||| |||||| ||||||| ||| || | |||||
Sbjct: 116398985 aaaataaacaacaaagttttactgtatagcccaggaagctatattcaatatcttataata 116399044
Query: 3068 aaatataatggaaaaga 3084
| ||||||||||||||
Sbjct: 116399045 acttataatggaaaaga 116399061
Score = 71.9 bits (36), Expect = 2e-09
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 3005 tataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgta 3064
||||||||||||| ||| |||||||| ||||| ||||| ||||||||| | | || ||||
Sbjct: 17480475 tataaaataaacaacaaggatttactctatagtacagggaactatattcactatcttgta 17480534
Query: 3065 ataaaatataatggaaaaga 3084
|||| ||||||||||||||
Sbjct: 17480535 ataacctataatggaaaaga 17480554
Score = 71.9 bits (36), Expect = 2e-09
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctca 3151
|||||||||| |||||||||| |||||||| |||| ||||||| ||||||||||||
Sbjct: 20782776 aatcactttgttgtgtacctgaaactaacacaatattgtaaatcaactatacctca 20782831
Score = 71.9 bits (36), Expect = 2e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||| |||||||||||||||||| ||| || ||||||||| ||||||||||||
Sbjct: 27415169 tactgtacagcacaggaaactatattcaatatcttgtaataaagtataatggaaaa 27415114
Score = 69.9 bits (35), Expect = 8e-09
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 3030 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||
Sbjct: 667169 tgtatagcacagggaactatattcaatgtcctgtaataaacaataatggaaaaga 667223
Score = 69.9 bits (35), Expect = 8e-09
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 3030 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||| ||||||||| ||| || |||||||||| |||||||||||||
Sbjct: 35266466 tgtatagcacagggaactatattcaatatcctgtaataaaacataatggaaaaga 35266412
Score = 69.9 bits (35), Expect = 8e-09
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||| ||||| ||||||||| ||| || ||||||||| |||||||||||||| |
Sbjct: 114799624 tactgtatagtacagggaactatattcaatatcctgtaataaactataatggaaaagaat 114799565
Query: 3087 ata 3089
|||
Sbjct: 114799564 ata 114799562
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||| ||||||||| ||||||||| ||| || |||||||| ||||||||||||
Sbjct: 27050058 gatttactgtctagcacagggaactatattcaatatcttgtaataatgtataatggaaaa 27049999
Query: 3083 ga 3084
||
Sbjct: 27049998 ga 27049997
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||| |||||||||| ||||||||| ||| || ||| ||||||||||||||||||||
Sbjct: 51925397 tactgcatagcacagggaactatattcaatatcctgtgataaaatataatggaaaaga 51925454
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||||| |||||||||| |||||| |||||||| ||||||| ||||
Sbjct: 54552427 gatttactgtatagcacaagaaactatatccaatgtcttgtaataagctataatgaaaaa 54552368
Query: 3083 ga 3084
||
Sbjct: 54552367 ga 54552366
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||
Sbjct: 55325909 gatttactgtatagcacagagaactatattcaatatcttgtaataacctataatggaaaa 55325968
Query: 3083 ga 3084
||
Sbjct: 55325969 ga 55325970
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||||||||| || ||| ||||| | |||||||||||
Sbjct: 65051391 tactgtatagcacaggaaactatattaaatatcttgtgataaaccacaatggaaaaga 65051448
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || | ||||||| ||||||||||||||
Sbjct: 67747940 tactgtatagcacagggaactatattcaatatcttataataaactataatggaaaaga 67747997
Score = 67.9 bits (34), Expect = 3e-08
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 2999 accatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgt 3058
||||| ||||| ||||||| || |||||||||||||||||||| ||||||||| | | |
Sbjct: 141229416 accatatataaggtaaacagtaaggatttactgtatagcacagggaactatattcagtat 141229475
Query: 3059 catgtaataaaatataatggaaaaga 3084
| || |||||| ||||||| ||||||
Sbjct: 141229476 cttgcaataaagtataatgcaaaaga 141229501
Score = 65.9 bits (33), Expect = 1e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 3082 agagtatatatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaat 3138
|||||||||||| |||||||||||||| |||||| ||||||||||| | |||||||
Sbjct: 54788497 agagtatatatctgaatcactttgctgtatacctgaaactaacagaacattgtaaat 54788553
Score = 65.9 bits (33), Expect = 1e-07
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 3024 atttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaag 3083
||||||||||||||||||| ||||||||| ||| || || |||||| ||||||| |||||
Sbjct: 126554804 atttactgtatagcacagggaactatattcaatctcttgcaataaactataatgaaaaag 126554745
Query: 3084 a 3084
|
Sbjct: 126554744 a 126554744
Score = 65.9 bits (33), Expect = 1e-07
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 3024 atttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaag 3083
||||||||||||||||||| ||||||||| ||| || || |||||| ||||||| |||||
Sbjct: 126700735 atttactgtatagcacagggaactatattcaatctcttgcaataaactataatgaaaaag 126700676
Query: 3084 a 3084
|
Sbjct: 126700675 a 126700675
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3029 ctgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 3295259 ctgtatagcacagggaactatattcaatatcatgaaataacctataatggaaaaga 3295204
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3029 ctgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 3418190 ctgtatagcacagggaactatattcaatatcatgaaataacctataatggaaaaga 3418135
Score = 63.9 bits (32), Expect = 5e-07
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 3003 tgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatg 3062
||||||||||||||| ||| ||| |||| | ||| ||||| ||||||||| |||||| ||
Sbjct: 26971968 tgtataaaataaacaacaaggatctactatctagtacagggaactatattcaatgtcctg 26971909
Query: 3063 taataaaatataatggaaaagagt 3086
|||||| | |||||||||||||
Sbjct: 26971908 taataatctgcaatggaaaagagt 26971885
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3029 ctgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||| ||| || ||||||||| ||| |||||||||
Sbjct: 42266654 ctgtatagcacaggaaactatattgaatatcctgtaataaaccatattggaaaaga 42266599
Score = 63.9 bits (32), Expect = 5e-07
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 3009 aaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataa 3068
||||||||| ||| || |||||||||||||||| ||||||||| ||| || ||| ||||
Sbjct: 50737149 aaataaacaacaaggacctactgtatagcacagggaactatattcaatatcctgtgataa 50737090
Query: 3069 aatataatggaaaagagtatatat 3092
| |||||||||||| |||||||
Sbjct: 50737089 accgtaatggaaaagaatatatat 50737066
Score = 63.9 bits (32), Expect = 5e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 3032 tatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaag 3083
||||||||||| ||||||||||||| || ||||||||| ||||||||||||
Sbjct: 100532395 tatagcacagggaactatattaaatatcctgtaataaaccataatggaaaag 100532344
Score = 63.9 bits (32), Expect = 5e-07
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 3029 ctgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagtat 3088
|||||||||||||| ||||||||| ||| || ||||||||| ||||||||||| | |||
Sbjct: 120286789 ctgtatagcacagggaactatattcaatatcctgtaataaaccataatggaaaaaaatat 120286730
Query: 3089 atat 3092
||||
Sbjct: 120286729 atat 120286726
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 3026 ttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||| ||||||| ||||||||| ||| || |||||||| ||||||||||||||
Sbjct: 11544836 ttactgtatggcacagggaactatattcaatatcttgtaataacctataatggaaaaga 11544894
Score = 61.9 bits (31), Expect = 2e-06
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 2990 ataggtactaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactat 3049
|||| ||||||| ||||||||||||||| ||| || ||||||||| |||||| |||| |
Sbjct: 27634021 atagatactaccgtgtataaaataaacaacaaggacctactgtataccacagggaactgt 27633962
Query: 3050 attaaatgtcatgtaataaaatataatggaaaaga 3084
||| ||| || ||| ||||| ||||||| |||||
Sbjct: 27633961 attcaatatcctgtgataaatcataatgggaaaga 27633927
Score = 61.9 bits (31), Expect = 2e-06
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 3006 ataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaa 3065
||||||||| || ||| ||||||||||| |||||||| ||||||||| | | || |||||
Sbjct: 52814391 ataaaataatcaacaaggatttactgtagagcacagggaactatattcagtatcttgtaa 52814332
Query: 3066 taaaatataatggaaaaga 3084
||| ||| ||||||||||
Sbjct: 52814331 taacctatgatggaaaaga 52814313
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 3030 tgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagtat 3088
|||||||||||| ||||||||| ||| || ||| ||||| ||||||||||||||||||
Sbjct: 138476799 tgtatagcacagacaactatattcaatatcctgtgataaactataatggaaaagagtat 138476741
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| |||||| ||||| || |||||||| ||||||||||||||
Sbjct: 13049735 tactgtatagcacagggtactatactaaatatcttgtaataacctataatggaaaaga 13049678
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctcattta 3155
||||||| |||| | |||||| |||||||| |||||||||||| ||||| |||||| |||
Sbjct: 27072559 aatcactatgctctctacctgaaactaacataatactgtaaatcaactacacctcaatta 27072500
Query: 3156 aa 3157
||
Sbjct: 27072499 aa 27072498
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||||||| || |||||||||||||||| ||||||||| ||| || || |||||
Sbjct: 27324427 ataaacagcaaggacctactgtatagcacagggaactatattcaatatcctgcgataaat 27324368
Query: 3071 tataatggaaaaga 3084
|||||| |||||||
Sbjct: 27324367 tataatagaaaaga 27324354
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| |||| |||| ||| || ||||||||| |||||||||||||
Sbjct: 55425334 tactgtatagcacagggaactgtattcaatatcctgtaataaaccataatggaaaaga 55425277
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||| |||||||||||||||||| || |||| |||||||||||||
Sbjct: 57199397 tactgtatagcacaagaaactatattaaatgtctagtgataagccataatggaaaaga 57199340
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||| ||||||||||| ||||||||| ||| || |||||||| ||||||||||||||
Sbjct: 77412687 tactatatagcacagggaactatattcaatatcttgtaataacctataatggaaaaga 77412744
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
|||||||| || |||||||||||||||||||| || ||||| ||| || | ||||||
Sbjct: 80729886 ataaacagtaaggatttactgtatagcacagggaatgatattcaatatcttataataacc 80729945
Query: 3071 tataatggaaaaga 3084
||||||||||||||
Sbjct: 80729946 tataatggaaaaga 80729959
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctcattta 3155
|||| ||||||||| ||||| |||||||| |||| |||||||||||||||| ||| |||
Sbjct: 109368543 aatcgctttgctgtacacctgaaactaacataatattgtaaataaactatacttcaatta 109368602
Query: 3156 aa 3157
||
Sbjct: 109368603 aa 109368604
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| |||||||||| || | ||||||||| ||||||| ||||||
Sbjct: 112922181 tactgtatagcacagggaactatattagatattttgtaataaactataatgaaaaaga 112922124
Score = 60.0 bits (30), Expect = 8e-06
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatatt 3052
||||||||||||||||||||||||||||||
Sbjct: 138452101 gatttactgtatagcacaggaaactatatt 138452130
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||| ||||| |||||||||||||
Sbjct: 139966086 tactgtatagcacagggaactatattcaatatcctgtgataaacaataatggaaaaga 139966143
Score = 60.0 bits (30), Expect = 8e-06
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatatt 3052
||||||| |||||||||||||||||||| ||| |||||||||
Sbjct: 147695983 ataaacaacaaagatttactgtatagcaaagggaactatatt 147695942
>Sscrofa_Chr02
|| Length = 162569375
Score = 81.8 bits (41), Expect = 2e-12
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 3019 caaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatgg 3078
|||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||
Sbjct: 99591300 caaagacttactgtatagcacaggaaactatattcaatatcatgtaataacctataatga 99591359
Query: 3079 aaaag 3083
|||||
Sbjct: 99591360 aaaag 99591364
Score = 81.8 bits (41), Expect = 2e-12
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 3019 caaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatgg 3078
|||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||
Sbjct: 99752482 caaagacttactgtatagcacaggaaactatattcaatatcatgtaataacctataatga 99752423
Query: 3079 aaaag 3083
|||||
Sbjct: 99752422 aaaag 99752418
Score = 79.8 bits (40), Expect = 9e-12
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 3005 tataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgta 3064
||||||||||| ||||| |||||||||||| ||||||| ||||||||||||| || ||||
Sbjct: 128841434 tataaaataaaaagcaaggatttactgtattgcacagggaactatattaaatatcttgta 128841375
Query: 3065 ataa 3068
||||
Sbjct: 128841374 ataa 128841371
Score = 69.9 bits (35), Expect = 8e-09
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 3024 atttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||||||||||||||| | ||||||||||| || |||||||| ||||||||||||
Sbjct: 139413127 atttactgtatagcacagggagctatattaaatatcttgtaataatctataatggaaaa 139413185
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||| ||| |||||| ||||||||| |||||||||||||
Sbjct: 51806577 tactgtatagcacagggaactacattcaatgtcctgtaataaaccataatggaaaaga 51806520
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||| ||||||||| |||||||||||||| ||| || |||||||| ||||||||||||
Sbjct: 80302326 gatttcctgtatagcgcaggaaactatattcaatttcttgtaataacctataatggaaaa 80302267
Query: 3083 ga 3084
||
Sbjct: 80302266 ga 80302265
Score = 67.9 bits (34), Expect = 3e-08
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||||||| ||||||||||| |||||||| ||||||||| || || ||||||||
Sbjct: 88218721 ataaacagcaaggatttactgtacagcacagggaactatatttaacatcttgtaataagc 88218780
Query: 3071 tataatggaaaaga 3084
|||||| |||||||
Sbjct: 88218781 tataatagaaaaga 88218794
Score = 65.9 bits (33), Expect = 1e-07
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 3028 actgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagta 3087
||||||||||||||| ||||||||| ||| || ||||||||| ||| ||||||||| ||
Sbjct: 91875456 actgtatagcacagggaactatattcaatatcctgtaataaaccatagtggaaaagaata 91875397
Query: 3088 tatat 3092
|||||
Sbjct: 91875396 tatat 91875392
Score = 65.9 bits (33), Expect = 1e-07
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 3095 aaatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
||||||||||||||| |||||| |||||||| || ||||||||| ||||||||
Sbjct: 105095164 aaatcactttgctgtatacctgaaactaacacaacactgtaaatcaactatac 105095216
Score = 65.9 bits (33), Expect = 1e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaag 3083
||||||| |||||||||||||||||| ||| || |||||||| |||||||||||||
Sbjct: 149995939 tactgtagagcacaggaaactatatttaatatcttgtaataatctataatggaaaag 149995995
Score = 63.9 bits (32), Expect = 5e-07
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| |||||| || |||| |||||||| ||||||||||||| || ||||||||
Sbjct: 84249117 ataaacaacaaagacctattgtagagcacagggaactatattaaatatcttgtaataacc 84249176
Query: 3071 tataatggaaaa 3082
||||||||||||
Sbjct: 84249177 tataatggaaaa 84249188
Score = 63.9 bits (32), Expect = 5e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
|||||||||||||| |||||| |||||||| |||| ||||||| ||||||||
Sbjct: 129916043 aatcactttgctgtatacctgaaactaacacaatattgtaaatcaactatac 129915992
Score = 61.9 bits (31), Expect = 2e-06
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 3028 actgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagta 3087
|||| |||||||||| ||||||||| ||| || ||| ||||| |||||||||||||| ||
Sbjct: 66805033 actgcatagcacagggaactatattcaatatcctgtgataaactataatggaaaagaata 66805092
Query: 3088 tat 3090
|||
Sbjct: 66805093 tat 66805095
Score = 61.9 bits (31), Expect = 2e-06
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 3010 aataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaa 3069
|||||||| |||||| |||||||||||||||| ||||||||| ||| || ||||| ||
Sbjct: 75748223 aataaacaacaaagacctactgtatagcacagggaactatatttaatatcttgtaa-caa 75748165
Query: 3070 atataatggaaaaga 3084
||||||||||||||
Sbjct: 75748164 ctataatggaaaaga 75748150
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 3093 ccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
|||||||||||||| ||||||||| |||||||| | ||||||||| ||||||||
Sbjct: 98223284 ccaaatcactttgccgtgtacctgaaactaacacagtactgtaaaccaactatac 98223338
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||||||| || |||||| ||| || |||||||| |||||||| |||
Sbjct: 10974895 gatttactgtatagcacagggaagtatattcaatatcttgtaataacctataatgggaaa 10974954
Query: 3083 ga 3084
||
Sbjct: 10974955 ga 10974956
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||| ||||||||||||||||||||||||| || | ||||||| || ||||||||||
Sbjct: 13774953 tactatatagcacaggaaactatattaaatatcctataataaaccatgatggaaaaga 13775010
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||||||||| || ||||||||||
Sbjct: 18614888 tactgtatagcacagggaactatattcaatatcctgtaataaaccatgatggaaaaga 18614945
Score = 60.0 bits (30), Expect = 8e-06
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||||||||| ||||||||| ||| || |||||||| | ||||| |||||| |
Sbjct: 20762699 tactgtatagcacagggaactatattcaatatcttgtaataacctgtaatgaaaaagaat 20762758
Query: 3087 atatat 3092
||||||
Sbjct: 20762759 atatat 20762764
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||| ||||| |||||||||||||
Sbjct: 50312171 tactgtatagcacagggaactatattcaatatcctgtgataaaccataatggaaaaga 50312228
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||| ||||| |||||||||||||
Sbjct: 58364626 tactgtatagcacaggcaactatattcaatatcctgtgataaaccataatggaaaaga 58364683
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || |||||||| || |||||||||||
Sbjct: 63493219 tactgtatagcacagggaactatattcaatatcttgtaataacctaaaatggaaaaga 63493162
Score = 60.0 bits (30), Expect = 8e-06
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 3005 tataaaataaacagcaaagatttactgtatagcacagg 3042
||||||||||||| |||| |||||||||||||||||||
Sbjct: 129195599 tataaaataaacaacaaaaatttactgtatagcacagg 129195636
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||| | ||| || |||||||| ||||||||||||||
Sbjct: 159589356 tactgtatagcacagggaactatactcaatatcttgtaataatctataatggaaaaga 159589299
>Sscrofa_Chr01
|| Length = 315321322
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 3028 actgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||
Sbjct: 231623414 actgtatagcacaggaaactatattcaatgtcttgtaataacctataatggaaaaga 231623470
Score = 77.8 bits (39), Expect = 3e-11
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||||||||| ||||||||| ||| || ||||||||| |||||||||||||| |
Sbjct: 282768952 tactgtatagcacagggaactatattcaatatcctgtaataaactataatggaaaagaat 282769011
Query: 3087 ata 3089
|||
Sbjct: 282769012 ata 282769014
Score = 75.8 bits (38), Expect = 1e-10
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| |||||| ||||||||| ||||||| ||||||
Sbjct: 152118302 tactgtatagcacagggaactatattcaatgtcttgtaataaactataatgaaaaaga 152118359
Score = 71.9 bits (36), Expect = 2e-09
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 3007 taaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaat 3066
||||||||||| ||| ||||||||||| ||||||| ||||| |||| ||| || ||||||
Sbjct: 123129808 taaaataaacaccaaggatttactgtacagcacagcaaactgtatttaatatcttgtaat 123129867
Query: 3067 aaaatataatggaaaa 3082
|| ||||||||||||
Sbjct: 123129868 aacctataatggaaaa 123129883
Score = 69.9 bits (35), Expect = 8e-09
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 2996 actaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactata 3050
|||||||| ||||||||||||| ||| |||| ||||||||||||||| |||||||
Sbjct: 107276225 actaccatttataaaataaacaacaaggattcactgtatagcacagggaactata 107276279
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| |||||| ||||||||| | | ||||||||||
Sbjct: 26275546 tactgtatagcacagggaactatattcaatgtcctgtaataaactgtgatggaaaaga 26275603
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||| || |||||| ||||||||| ||||||||||||||
Sbjct: 56271794 tactgtatagcacagggaactacatccaatgtcttgtaataaactataatggaaaaga 56271737
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 64783984 tactgtatagcacagggaactatattgaatatcctgtaataaaccataatggaaaaga 64783927
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||||
Sbjct: 72491557 tactgtatagcacagggaactatattcaatatcttgtaataacctataatggaaaaga 72491500
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||||||||| ||||||||| ||| || ||| ||||| |||||||||||||||
Sbjct: 144788978 tactgtatagcacagggaactatattcaatatcttgtgataaaccataatggaaaagagt 144788919
Query: 3087 at 3088
||
Sbjct: 144788918 at 144788917
Score = 67.9 bits (34), Expect = 3e-08
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| || |||||||||||||| ||||| ||||||||| ||| || ||||||||
Sbjct: 248039023 ataaacaacacagatttactgtataatacagggaactatattcaatatcttgtaataagc 248039082
Query: 3071 tataatggaaaaga 3084
||||||||||||||
Sbjct: 248039083 tataatggaaaaga 248039096
Score = 67.9 bits (34), Expect = 3e-08
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| |||| | | ||||||||||||||||||||||||| ||| || | | |||||
Sbjct: 259177803 ataaacaacaaatactgactgtatagcacaggaaactatattcaatatcctatgataaac 259177744
Query: 3071 tataatggaaaaga 3084
||||||||||||||
Sbjct: 259177743 tataatggaaaaga 259177730
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
||||||||||||||| ||||||||| |||||| | ||||||| |||||||||||||||
Sbjct: 276841190 tactgtatagcacagagaactatattcaatgtcctataataaaccataatggaaaagagt 276841131
Query: 3087 at 3088
||
Sbjct: 276841130 at 276841129
Score = 67.9 bits (34), Expect = 3e-08
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 3088 tatatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
|||| ||||||||||||||||| ||||| |||||||| || | ||||||| ||||||||
Sbjct: 281802519 tataaccaaatcactttgctgtacacctgaaactaacacaacagtgtaaatcaactatac 281802578
Query: 3148 ctcatttaaa 3157
|||| |||||
Sbjct: 281802579 ctcaattaaa 281802588
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||||||||| |||| |||| ||| || ||| ||||| ||||||||||||||||
Sbjct: 287509361 tactgtatagcacagggaactgtattcaatatcctgtgataaactataatggaaaagagt 287509302
Query: 3087 at 3088
||
Sbjct: 287509301 at 287509300
Score = 67.9 bits (34), Expect = 3e-08
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| || |||||| ||| || ||||||||| ||||||||||||||
Sbjct: 293105878 tactgtatagcacagggaaatatattcaatatcttgtaataaattataatggaaaaga 293105935
Score = 65.9 bits (33), Expect = 1e-07
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| |||||||||||||||||||| ||||||||| ||| || | ||||||
Sbjct: 8247588 ataaacaacaaggatttactgtatagcacagggaactatattcaatatcttataataacc 8247529
Query: 3071 tataatggaaaag 3083
|| ||||||||||
Sbjct: 8247528 tacaatggaaaag 8247516
Score = 65.9 bits (33), Expect = 1e-07
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 2996 actaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaa 3055
|||||||| ||||||||||||| ||| || || |||| ||||||||| ||||||||| ||
Sbjct: 26680349 actaccatatataaaataaacaacaaggagttgctgtttagcacagggaactatattcaa 26680290
Query: 3056 tgtcatgtaataaaatataatggaaaaga 3084
| || | |||||| | ||||||||||||
Sbjct: 26680289 tatctttcaataaactgtaatggaaaaga 26680261
Score = 65.9 bits (33), Expect = 1e-07
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 2996 actaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaa 3055
|||||||| ||||||||||||| ||| || || |||| ||||||||| ||||||||| ||
Sbjct: 26796453 actaccatatataaaataaacaacaaggagttgctgtttagcacagggaactatattcaa 26796512
Query: 3056 tgtcatgtaataaaatataatggaaaaga 3084
| || | |||||| | ||||||||||||
Sbjct: 26796513 tatctttcaataaactgtaatggaaaaga 26796541
Score = 65.9 bits (33), Expect = 1e-07
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaag 3083
|||| ||||||||||| ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 57493178 tactatatagcacagggaactatattcaatatcttgtaataaactataatggaaaag 57493234
Score = 65.9 bits (33), Expect = 1e-07
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaag 3083
|||||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||
Sbjct: 148157346 tactgtatagcacaggaaactatattcaatatcctgtgataaaccataatggaaaag 148157290
Score = 65.9 bits (33), Expect = 1e-07
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 3086 tatatatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaactat 3145
|||||||| ||||||||||||||||||||| |||||||||| || || |||| ||||||
Sbjct: 290017918 tatatatctgaatcactttgctgtgtacctgaaactaacagagtattgaaaatcaactat 290017977
Query: 3146 a 3146
|
Sbjct: 290017978 a 290017978
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3088 tatatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaact 3143
|||| ||||||||||||||||| |||||| |||||||| |||| ||||||| ||||
Sbjct: 19919079 tataaccaaatcactttgctgtatacctgaaactaacacaatattgtaaatcaact 19919024
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3088 tatatccaaatcactttgctgtgtacctgcaactaacagaatactgtaaataaact 3143
|||| ||||||||||||||||| |||||| |||||||| |||| ||||||| ||||
Sbjct: 20014224 tataaccaaatcactttgctgtatacctgaaactaacacaatattgtaaatcaact 20014169
Score = 63.9 bits (32), Expect = 5e-07
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 3005 tataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgta 3064
||||||||||| | ||| || ||||| ||||||| ||| ||||||||| ||| || ||||
Sbjct: 77205177 tataaaataaataacaaggacttactttatagcaaagggaactatattcaatatcttgta 77205236
Query: 3065 ataaaatataatggaaaaga 3084
|||| ||||||||||||||
Sbjct: 77205237 ataacctataatggaaaaga 77205256
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
|||||||||||||||| ||||||||| ||| || ||||||||| | |||||||||||||
Sbjct: 94455839 tactgtatagcacagggaactatattcaatatcctgtaataaacaagaatggaaaagagt 94455780
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||| ||||||||||||| ||| |||||||| ||| |||||||||||
Sbjct: 158977868 tactgtatagcagaggaaactatattcaatatcatgtaacaaaccataatggaaaa 158977813
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||| ||||||||||||| ||| |||||||| ||| |||||||||||
Sbjct: 159209441 tactgtatagcagaggaaactatattcaatatcatgtaacaaaccataatggaaaa 159209496
Score = 63.9 bits (32), Expect = 5e-07
Identities = 96/116 (82%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 2970 aaattatgagtatcagattaataggtac-taccatgtataaaataaacagcaaagattta 3028
|||||| |||||| |||||||||| ||| ||||| ||||||||||||| | ||||||
Sbjct: 167986961 aaattaggagtataagattaatagatacataccacatataaaataaacaaaatggattta 167987020
Query: 3029 ctgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|| ||||||| ||| ||||||||| || || | |||||| ||||||||||||||
Sbjct: 167987021 ctatatagcatagggaactatatttgatatcttataataacctataatggaaaaga 167987076
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 3025 tttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||| |||||||| ||||||||| ||| || ||| |||||| |||||||||||||
Sbjct: 270961593 tttactgtacagcacagggaactatattcaatatcctgtgataaaacataatggaaaaga 270961534
Score = 63.9 bits (32), Expect = 5e-07
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
|||||||||||||| |||||| |||||||| || ||||||||| ||||||||
Sbjct: 278674114 aatcactttgctgtatacctgaaactaacacaacactgtaaatcaactatac 278674165
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 3097 atcactttgctgtgtacctgcaactaacagaatactgtaaataaactatac 3147
||||||||||||| ||| ||||||||||| |||| ||||||| ||||||||
Sbjct: 18598790 atcactttgctgtatacttgcaactaacacaatattgtaaatcaactatac 18598840
Score = 61.9 bits (31), Expect = 2e-06
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 3020 aaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatgga 3079
|||||||||||||||| |||||||||||||| | ||| || | |||||| |||||||||
Sbjct: 26588630 aaagatttactgtatatcacaggaaactatactcaatatcttataataacctataatgga 26588571
Query: 3080 aaa 3082
|||
Sbjct: 26588570 aaa 26588568
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactata 3146
|||||||||||||| |||||| |||||||| |||| ||||||| |||||||
Sbjct: 31481742 aatcactttgctgtatacctgaaactaacacaatattgtaaatcaactata 31481792
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 3028 actgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
||||||||||||||| ||||||||| ||| || |||||||| ||||||||||||
Sbjct: 112618299 actgtatagcacagggaactatattcaatatcttgtaataatctataatggaaaa 112618245
Score = 61.9 bits (31), Expect = 2e-06
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 3006 ataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaa 3065
|||||||||||| ||| || |||||||||||||||| ||||||||| |||||| ||| |
Sbjct: 144222067 ataaaataaacaacaaggacctactgtatagcacagggaactatattcaatgtcttgtga 144222008
Query: 3066 taaaatataatggaaaaga 3084
|| ||| ||||||||||
Sbjct: 144222007 caacctatgatggaaaaga 144221989
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 3006 ataaaataaacagcaaagatttactgtatagcacaggaaactatatt 3052
|||||||| || ||| ||||||||||||||||||||||||||||||
Sbjct: 151801922 ataaaataggcaacaaggatttactgtatagcacaggaaactatatt 151801968
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| |||||| |||||||||||||||| ||||||||| ||| || ||||||||
Sbjct: 158790062 ataaacaacaaagacctactgtatagcacagggaactatattcaatatcctgtaataagc 158790003
Query: 3071 tataatggaaa 3081
||||||||||
Sbjct: 158790002 cataatggaaa 158789992
Score = 61.9 bits (31), Expect = 2e-06
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 3033 atagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaag 3083
|||||||||| ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 201127771 atagcacagggaactatattcaatatcttgtaataaactataatggaaaag 201127821
Score = 61.9 bits (31), Expect = 2e-06
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 2996 actaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatattaaa 3055
|||||||| | ||||||||||| || | |||||||||||||||||| | || |||| |
Sbjct: 244466504 actaccatatgtaaaataaacaacagggttttactgtatagcacagggagctgtattcag 244466563
Query: 3056 tgtcatgtaataaaatataatggaaaa 3082
| || ||||||||| ||||||||||||
Sbjct: 244466564 tatcttgtaataaactataatggaaaa 244466590
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||| |||||||||||| |||||| ||| || |||||||| ||||||||||||||
Sbjct: 13124171 tactgtgtagcacaggaaattatattcaatatcttgtaataacctataatggaaaaga 13124114
Score = 60.0 bits (30), Expect = 8e-06
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 3028 actgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaa 3081
||||||||||||||| ||||||||| ||| || | |||||||| ||||||||||
Sbjct: 13370294 actgtatagcacagggaactatattcaatatcctataataaaacataatggaaa 13370241
Score = 60.0 bits (30), Expect = 8e-06
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 3009 aaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataa 3068
||||||||| ||| |||||||| ||||||||||| ||| ||||| || || || |||||
Sbjct: 32807567 aaataaacaacaaggatttactatatagcacagggaaccatattcaacatcttgcaataa 32807626
Query: 3069 aatataatggaaaagagtatat 3090
|||||||||||||| |||||
Sbjct: 32807627 gctataatggaaaagaatatat 32807648
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataa 3068
||||||| ||||||||||||| |||||||||||||||||| ||| || ||||||||
Sbjct: 83619871 ataaacaacaaagatttactgggtagcacaggaaactatatgcaatatcttgtaataa 83619814
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||| ||| ||||||||| ||| || ||||||||| |||||||||||||
Sbjct: 85148907 tactgtatagcaaagggaactatattcaatatcctgtaataaaccataatggaaaaga 85148850
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3096 aatcactttgctgtgtacctgcaactaacagaatactgtaaataaactatacctcattta 3155
|||||||||||||| |||||| |||||||| |||| | ||||| ||||||| |||| |||
Sbjct: 92654589 aatcactttgctgtttacctgaaactaacacaatattataaatcaactatagctcaatta 92654648
Query: 3156 aa 3157
||
Sbjct: 92654649 aa 92654650
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||||||||| ||||| |||||||
Sbjct: 94207275 tactgtatagcacagggaactatattcaatatcctgtaataaaccataatagaaaaga 94207218
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| | ||||||| ||| || ||||||||| |||||||||||||
Sbjct: 102103752 tactgtatagcacagggacctatattcaatatcctgtaataaaccataatggaaaaga 102103695
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| || || ||||||||| |||||||||||||
Sbjct: 116294521 tactgtatagcacagggaactatattccatatcctgtaataaaccataatggaaaaga 116294464
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaagagt 3086
||||||||||||| |||||||||||| ||| || | | ||||| |||||||||||||||
Sbjct: 128156260 tactgtatagcactggaaactatattcaatatcttttgataaatcataatggaaaagagt 128156319
Query: 3087 at 3088
||
Sbjct: 128156320 at 128156321
Score = 60.0 bits (30), Expect = 8e-06
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 1005 cccccttctccttagctcaggatggcatgtaagcctcaatggcctg 1050
||||||||||||||| ||||||| |||| ||||||||||| |||||
Sbjct: 129414818 cccccttctccttagatcaggatagcatataagcctcaattgcctg 129414773
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| |||| |||| ||| || ||||||||| |||||||||||||
Sbjct: 134306814 tactgtatagcacagggaactctattcaatatcctgtaataaaccataatggaaaaga 134306871
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||| ||||| ||| || |||||||| ||||||||||||||
Sbjct: 152556276 tactgtatagcacagggaacaatattcaatatcttgtaataacctataatggaaaaga 152556219
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||||| || | |||||||| ||||||||||||||
Sbjct: 178398129 tactgtatagcacaggaaactatattcaagaccttgtaataacctataatggaaaaga 178398186
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||||||||||||| || | |||||||| ||||||||||||||
Sbjct: 178454467 tactgtatagcacaggaaactatattcaagaccttgtaataacctataatggaaaaga 178454410
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| |||||||| |||||||||| ||||| ||| ||| || ||||||||
Sbjct: 179591200 ataaacaacaaggatttactacatagcacagggaactacattcaatatcttgtaataacc 179591141
Query: 3071 tataatggaaaaga 3084
||||||||||||||
Sbjct: 179591140 tataatggaaaaga 179591127
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| |||| |||| ||| || ||||||||| ||| ||||||||||
Sbjct: 185226713 tactgtatagcacagggaactgtattcaatatcttgtaataaactatgatggaaaaga 185226656
Score = 60.0 bits (30), Expect = 8e-06
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatatt 3052
||||||||||||||||||||||||||||||
Sbjct: 189020909 gatttactgtatagcacaggaaactatatt 189020880
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||| ||||| |||||||||||||
Sbjct: 203109967 tactgtatagcacagggaactatattcaatatcttgtgataaatcataatggaaaaga 203110024
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||||||| || |||||||||||||||||||||||||| | | | |||||| |||
Sbjct: 209120893 ataaacagcaaggacctactgtatagcacaggaaactatattcagtattatgtaaaaaac 209120834
Query: 3071 tataatggaaaaga 3084
| |||||||||||
Sbjct: 209120833 cacaatggaaaaga 209120820
Score = 60.0 bits (30), Expect = 8e-06
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||||||| || |||||||||||||||||||||||||| | | | |||||| |||
Sbjct: 209274651 ataaacagcaaggacctactgtatagcacaggaaactatattcagtattatgtaaaaaac 209274710
Query: 3071 tataatggaaaaga 3084
| |||||||||||
Sbjct: 209274711 cacaatggaaaaga 209274724
Score = 60.0 bits (30), Expect = 8e-06
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 2995 tactaccatgtataaaataaacagcaaagatttactgtatagcacaggaaactatatt 3052
||||| ||| ||||||||||||| ||| |||| ||| |||||||||||||||||||||
Sbjct: 232257270 tactatcatatataaaataaacaacaaggatt-actatatagcacaggaaactatatt 232257326
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
||||||||| |||||||||||||||| |||||| ||| ||||| |||| ||||||||
Sbjct: 239544676 tactgtataccacaggaaactatattcaatgtcctgtgataaatcataacggaaaaga 239544733
Score = 60.0 bits (30), Expect = 8e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatatt 3052
||||||||||||| |||||| ||||||||||| |||||||||
Sbjct: 245242230 ataaacagcaaagttttactctatagcacagggaactatatt 245242271
Score = 60.0 bits (30), Expect = 8e-06
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 3023 gatttactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaa 3082
|||||||||||||||||| | ||||||||| | | |||| ||||||| |||| |||||||
Sbjct: 248558711 gatttactgtatagcacaaggaactatattcactatcatataataaattatactggaaaa 248558652
Query: 3083 ga 3084
||
Sbjct: 248558651 ga 248558650
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||| ||| ||| || | ||||||| ||||||||||||||
Sbjct: 268795500 tactgtatagcacagggaactaaattgaatatcttataataaactataatggaaaaga 268795557
Score = 60.0 bits (30), Expect = 8e-06
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3027 tactgtatagcacaggaaactatattaaatgtcatgtaataaaatataatggaaaaga 3084
|||||||||||||||| ||||||||| ||| || ||||| ||| ||||||||| ||||
Sbjct: 292022500 tactgtatagcacaggcaactatattcaatatcttgtaacaaactataatggagaaga 292022557
Score = 60.0 bits (30), Expect = 8e-06
Identities = 77/92 (83%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 2995 tactaccatgtataaaata---aacagcaaagatttactgtatagcacaggaaactatat 3051
||||||||| ||||||||| |||| || ||||||||||||||||||||| ||| |||
Sbjct: 297716678 tactaccatatataaaatagaaaacaagaaggatttactgtatagcacaggacactgtat 297716619
Query: 3052 taaatgtcatgtaataaaatataatggaaaag 3083
| | | || ||||||||| |||||||| ||||
Sbjct: 297716618 tcagtatcttgtaataaactataatgggaaag 297716587
>gb|JH118966.1| Sus scrofa unplaced genomic scaffold ChrUScaf3798
Length = 497305
Score = 79.8 bits (40), Expect = 9e-12
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 3011 ataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgtaataaaa 3070
||||||| ||| |||||||||||||||||||||||||||||| || || ||||||||
Sbjct: 235845 ataaacaacaaggatttactgtatagcacaggaaactatattcaagatcttgtaataacc 235786
Query: 3071 tataatggaaaa 3082
||||||||||||
Sbjct: 235785 tataatggaaaa 235774
>gb|GL893397.2| Sus scrofa unplaced genomic scaffold ChrUScaf1282
Length = 141172
Score = 79.8 bits (40), Expect = 9e-12
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 3005 tataaaataaacagcaaagatttactgtatagcacaggaaactatattaaatgtcatgta 3064
||||||||||||| ||| || |||||||||||||||||||||||||| ||| || ||||
Sbjct: 121000 tataaaataaacaacaaggacctactgtatagcacaggaaactatattcaatatcttgta 120941
Query: 3065 ataaaatataatggaaaaga 3084
|||| |||||||| |||||
Sbjct: 120940 ataacctataatgggaaaga 120921
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 45,660,809
Number of extensions: 14845
Number of successful extensions: 14845
Number of sequences better than 1.0e-05: 49
Number of HSP's gapped: 14835
Number of HSP's successfully gapped: 675
Length of query: 3182
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 3160
Effective length of database: 2,808,408,574
Effective search space: 8874571093840
Effective search space used: 8874571093840
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 19 (38.2 bits)
S2: 30 (60.0 bits)