Animal-Genome cDNA OVRT1_0146_C03


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRT1_0146_C03
         (1362 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_899207.1| retinol dehydrogenase 12 [Bos taurus].               419   e-147
Alignment   gi|XP_002691025.1| PREDICTED: retinol dehydrogenase 11-like [Bo...   331   e-108
Alignment   gi|XP_582373.4| PREDICTED: retinol dehydrogenase 11 isoform 1 [...   331   e-108
Alignment   gi|NP_001068813.1| retinol dehydrogenase 13 [Bos taurus].            226   1e-66
Alignment   gi|NP_001068701.1| retinol dehydrogenase 14 [Bos taurus].            199   2e-59
Alignment   gi|NP_001069155.1| dehydrogenase/reductase SDR family member 13...   176   1e-57
Alignment   gi|NP_001071560.1| WW domain-containing oxidoreductase [Bos tau...   145   8e-42
Alignment   gi|NP_001095361.1| hypothetical protein LOC507942 [Bos taurus].      146   8e-39
Alignment   gi|XP_591168.4| PREDICTED: dehydrogenase/reductase (SDR family)...   101   2e-25
Alignment   gi|NP_001093783.1| dehydrogenase/reductase SDR family member 12...   103   4e-22

>ref|NP_899207.1| retinol dehydrogenase 12 [Bos taurus].
          Length = 316

 Score =  419 bits (1077), Expect(3) = e-147
 Identities = 214/248 (86%), Positives = 222/248 (89%)
 Frame = +2

Query: 215 FLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDV 394
           FLYV APSIRKFFAGGVCRT++QL GKVVVITGANTGIGKETARELARRGARVYIACRDV
Sbjct: 14  FLYVIAPSIRKFFAGGVCRTDVQLFGKVVVITGANTGIGKETARELARRGARVYIACRDV 73

Query: 395 LKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPY 574
           LKGESAASEI+ADTKNSQVLVRKLDLSDTKSIRAFAEGFL EEKQLHILINNAGVMLCPY
Sbjct: 74  LKGESAASEIQADTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPY 133

Query: 575 SKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKH 754
           SKTADGFETHL VN               K SAPARVVNLSSV HH GKIRFHDLQG+K+
Sbjct: 134 SKTADGFETHLAVNHLGHFLLTHLLLGRLKESAPARVVNLSSVAHHLGKIRFHDLQGDKY 193

Query: 755 YNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFSR 934
           YN GFAYCHSKLANVLFTRELAKRL+GTGVTTYAVHPGIV+S+LVRHSFLLCLLWRLFS 
Sbjct: 194 YNLGFAYCHSKLANVLFTRELAKRLKGTGVTTYAVHPGIVRSKLVRHSFLLCLLWRLFSP 253

Query: 935 FLKTAREG 958
           FLKT  EG
Sbjct: 254 FLKTTWEG 261



 Score =  118 bits (296), Expect(3) = e-147
 Identities = 53/56 (94%), Positives = 55/56 (98%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQWE 1122
            GAQTSLHCALAEGLEPLSGKYFSDCK+ WVSPRARNNKTAERLWNVSCELLGI+WE
Sbjct: 261  GAQTSLHCALAEGLEPLSGKYFSDCKKTWVSPRARNNKTAERLWNVSCELLGIRWE 316



 Score = 25.4 bits (54), Expect(3) = e-147
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 175 MLAVLGLLTSFLFF 216
           ML VLGLLTSFL F
Sbjct: 1   MLVVLGLLTSFLSF 14


>ref|XP_002691025.1| PREDICTED: retinol dehydrogenase 11-like [Bos taurus].
          Length = 338

 Score =  331 bits (848), Expect(2) = e-108
 Identities = 163/249 (65%), Positives = 193/249 (77%)
 Frame = +2

Query: 212 FFLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRD 391
           F LY+ AP IRK  + GVC + +QLPGKV V+TGAN GIGKETA+ELARRGARVY+ACRD
Sbjct: 13  FLLYIAAPQIRKMLSSGVCTSTIQLPGKVAVVTGANAGIGKETAKELARRGARVYLACRD 72

Query: 392 VLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCP 571
           V  GE  A EI+  T N QVLVRKLDL+DTKSIRAFA+ FL EEK LHILINNAGVM+CP
Sbjct: 73  VQNGELVAREIQMMTGNQQVLVRKLDLADTKSIRAFAKRFLEEEKHLHILINNAGVMMCP 132

Query: 572 YSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEK 751
           YSKTADGFE H+GVN               + SAP+RVVN+SS+ H  G+I FH+LQGEK
Sbjct: 133 YSKTADGFEMHMGVNHLGHFLLTHLLLEKLEESAPSRVVNVSSLAHLLGRIHFHNLQGEK 192

Query: 752 HYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS 931
            Y  G AYCHSKLAN+LFT+ELA+RL+G+GVT Y+VHPG V SELVRHS L+  +W +FS
Sbjct: 193 FYQSGLAYCHSKLANILFTQELARRLKGSGVTVYSVHPGTVNSELVRHSALMRWIWWIFS 252

Query: 932 RFLKTAREG 958
            F+KT ++G
Sbjct: 253 FFIKTPQQG 261



 Score = 82.0 bits (201), Expect(2) = e-108
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTSL+CAL EGLE LSG +FSDC  AWVS +ARN   A RLW+VSC+LLGI
Sbjct: 261  GAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 313


>ref|XP_582373.4| PREDICTED: retinol dehydrogenase 11 isoform 1 [Bos taurus].
          Length = 338

 Score =  331 bits (848), Expect(2) = e-108
 Identities = 163/249 (65%), Positives = 193/249 (77%)
 Frame = +2

Query: 212 FFLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRD 391
           F LY+ AP IRK  + GVC + +QLPGKV V+TGAN GIGKETA+ELARRGARVY+ACRD
Sbjct: 13  FLLYIAAPQIRKMLSSGVCTSTIQLPGKVAVVTGANAGIGKETAKELARRGARVYLACRD 72

Query: 392 VLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCP 571
           V  GE  A EI+  T N QVLVRKLDL+DTKSIRAFA+ FL EEK LHILINNAGVM+CP
Sbjct: 73  VQNGELVAREIQMMTGNQQVLVRKLDLADTKSIRAFAKRFLEEEKHLHILINNAGVMMCP 132

Query: 572 YSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEK 751
           YSKTADGFE H+GVN               + SAP+RVVN+SS+ H  G+I FH+LQGEK
Sbjct: 133 YSKTADGFEMHMGVNHLGHFLLTHLLLEKLEESAPSRVVNVSSLAHLLGRIHFHNLQGEK 192

Query: 752 HYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS 931
            Y  G AYCHSKLAN+LFT+ELA+RL+G+GVT Y+VHPG V SELVRHS L+  +W +FS
Sbjct: 193 FYQSGLAYCHSKLANILFTQELARRLKGSGVTVYSVHPGTVNSELVRHSALMRWIWWIFS 252

Query: 932 RFLKTAREG 958
            F+KT ++G
Sbjct: 253 FFIKTPQQG 261



 Score = 82.0 bits (201), Expect(2) = e-108
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTSL+CAL EGLE LSG +FSDC  AWVS +ARN   A RLW+VSC+LLGI
Sbjct: 261  GAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 313


>ref|NP_001068813.1| retinol dehydrogenase 13 [Bos taurus].
          Length = 335

 Score =  226 bits (577), Expect(2) = 1e-66
 Identities = 117/221 (52%), Positives = 150/221 (67%), Gaps = 1/221 (0%)
 Frame = +2

Query: 239 IRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAAS 418
           ++ F AGG C +   +PGK V++TGANTGIGK+TA ELA+RG  + +ACRD+ K E+AA 
Sbjct: 21  LKDFVAGGACPSKATIPGKTVIVTGANTGIGKQTALELAKRGGNIILACRDMEKCEAAAK 80

Query: 419 EIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFE 598
           EIR +T N +V  R LDL+  KSIR FA     EE+ +HILINNA VM CP+  T DGFE
Sbjct: 81  EIRGETLNHRVNARHLDLASLKSIREFAAKVTEEEEHVHILINNAAVMRCPHWTTEDGFE 140

Query: 599 THLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKH-YNRGFAY 775
             LGVN               KASAP+R++N+SS+ H AG I F DL  EK  Y+   AY
Sbjct: 141 MQLGVNYLGHFLLTNLLLDKLKASAPSRIINVSSLAHVAGHIDFEDLNWEKRKYDTKAAY 200

Query: 776 CHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHS 898
           C SKLA V+ T+EL++RLQGTGVT  A+HPG+ ++EL RH+
Sbjct: 201 CQSKLAVVVSTKELSRRLQGTGVTVNALHPGVARTELGRHT 241



 Score = 46.6 bits (109), Expect(2) = 1e-66
 Identities = 23/53 (43%), Positives = 34/53 (64%)
 Frame = +1

Query: 958  AQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQ 1116
            AQ S++ A+AE LE +SGKYF   K    +P A + + A+RLW  S  L+G++
Sbjct: 268  AQPSVYLAVAEELEGVSGKYFDVLKEKPPAPEAEDEEVAKRLWAESVRLVGLE 320


>ref|NP_001068701.1| retinol dehydrogenase 14 [Bos taurus].
          Length = 336

 Score =  199 bits (507), Expect(2) = 2e-59
 Identities = 111/244 (45%), Positives = 149/244 (61%), Gaps = 17/244 (6%)
 Frame = +2

Query: 290 GKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADT---------KN 442
           GK V+ITGAN+G+G+ TA EL R GARV + CRD  + E AA ++R +           N
Sbjct: 43  GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRERAEEAAGQLRREVCPAGGPDSGPN 102

Query: 443 S----QVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLG 610
           S    +++V++LDL+   S+R+F +  L EE +L +LINNAGV  CPY KT DGFE   G
Sbjct: 103 SGGAGELVVKELDLASLSSVRSFCQEMLQEEPRLDVLINNAGVFQCPYMKTEDGFEMQFG 162

Query: 611 VNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKL 790
           VN               K+SAP+R+V +SS ++  G I F DL  E+ YN+ F Y  SKL
Sbjct: 163 VNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFCYSRSKL 222

Query: 791 ANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS----RFLKTAREG 958
           AN+LFTRELA+RL+GT VT   +HPGIV++ L RH  +  L+  LF+     F KT  EG
Sbjct: 223 ANILFTRELARRLEGTSVTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPEEG 282

Query: 959 PRPA 970
            + A
Sbjct: 283 AQTA 286



 Score = 49.7 bits (117), Expect(2) = 2e-59
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQT+++ A +  +E +SG+YF DCK   + P+A +   A +LW++S  ++GI
Sbjct: 282  GAQTAVYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGI 334


>ref|NP_001069155.1| dehydrogenase/reductase SDR family member 13 precursor [Bos
           taurus].
          Length = 377

 Score =  176 bits (445), Expect(2) = 1e-57
 Identities = 104/215 (48%), Positives = 135/215 (62%), Gaps = 5/215 (2%)
 Frame = +2

Query: 266 CRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNS 445
           CR    L G+  V+TGAN+GIGK TA ELARRGARV +ACR   +GE+AA ++R ++ N+
Sbjct: 28  CRGLASLRGRTAVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNN 87

Query: 446 QVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXX 625
           +V+   LDL+   S+RAFA  FL+ E +L ILI+NAG+  C   +T + F   L VN   
Sbjct: 88  EVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSC--GRTREPFNLLLRVNHIG 145

Query: 626 XXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRF----HDLQGEKHYNRGFAYCHSKLA 793
                       K SAP+RVV +SS  H  G++ F    H + G +   R  AY +SKLA
Sbjct: 146 PFLLTHLLLPRLKTSAPSRVVVVSSAAHRRGRLDFTRLDHPVVGWQQELR--AYANSKLA 203

Query: 794 NVLFTRELAKRLQGTGVTTYAVHPGIVQSEL-VRH 895
           NVLF RELA +L+GTGVT YA HPG V SEL +RH
Sbjct: 204 NVLFARELATQLEGTGVTCYAAHPGPVNSELFLRH 238



 Score = 67.4 bits (163), Expect(2) = 1e-57
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +1

Query: 952  GGAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GGAQT L+CAL EG+EPLSG+YF++C    V P AR+++ A RLW  S +L G+
Sbjct: 260  GGAQTPLYCALQEGIEPLSGRYFANCHVEEVPPAARDDRAAHRLWEASRKLAGL 313


>ref|NP_001071560.1| WW domain-containing oxidoreductase [Bos taurus].
          Length = 414

 Score =  145 bits (366), Expect(2) = 8e-42
 Identities = 97/257 (37%), Positives = 137/257 (53%), Gaps = 13/257 (5%)
 Frame = +2

Query: 227 TAPSIRKFFAGGVCRTNM----QLPGKVVVITGANTGIGKETARELARRGARVYIACRDV 394
           T P+ R+ + G      +     L GKVVV+TGAN+GIG ETA+  A  GA V +ACR++
Sbjct: 99  TKPTTRQRYDGSTTAMEILQGRDLSGKVVVVTGANSGIGFETAKSFALHGAHVILACRNM 158

Query: 395 LKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPY 574
            +   A S I  +   ++V    LDL+  +S++ FA+ F  +   LH+L+ NA V   P+
Sbjct: 159 TRANEAVSRILGEWHKAKVEAMTLDLALLRSVQHFAQAFKAKNVSLHVLVCNAAVFGLPW 218

Query: 575 SKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHH-------AGKIRFH 733
           + T DG ET   VN                 SAPARVV +SS  H        +GK+ F 
Sbjct: 219 TLTKDGLETTFQVNHLGHFYLVQLLQDVLCRSAPARVVVVSSESHRFTDINDSSGKLDFS 278

Query: 734 DLQGEKH-YNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPG-IVQSELVRHSFLL 907
            L   K+ Y    AY  SKL N+LF+ EL +RL   GVT+ AVHPG ++ S L R  ++ 
Sbjct: 279 RLSPSKNDYWAMLAYNRSKLCNILFSNELHRRLSPRGVTSNAVHPGNMMYSALHRGWWVY 338

Query: 908 CLLWRLFSRFLKTAREG 958
            LL+ L   F K+ ++G
Sbjct: 339 TLLFTLARPFTKSMQQG 355



 Score = 44.7 bits (104), Expect(2) = 8e-42
 Identities = 22/51 (43%), Positives = 31/51 (60%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELL 1107
            GA T+++CA+A  LE L G YF+ C R   S  A++  +A  LW +S  LL
Sbjct: 355  GAATTVYCAVAPELEGLGGMYFNSCCRCLPSAEAQSEDSARALWALSERLL 405


>ref|NP_001095361.1| hypothetical protein LOC507942 [Bos taurus].
          Length = 330

 Score =  146 bits (368), Expect(2) = 8e-39
 Identities = 92/245 (37%), Positives = 140/245 (57%), Gaps = 4/245 (1%)
 Frame = +2

Query: 245 KFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEI 424
           KF+   +   +  L GK  V+TGAN+GIGK  ++ELA RGARV +ACR   +G+ A +EI
Sbjct: 34  KFYLWDLQHCSTDLTGKTAVVTGANSGIGKAVSQELAHRGARVILACRSRERGQQALAEI 93

Query: 425 RADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETH 604
           +A +K++++L+ ++DLS   SIR+FA+  L E  ++H+L+NNA V   P + T +G +  
Sbjct: 94  QATSKSNRLLLGEVDLSSMASIRSFAQRLLQECPEIHLLVNNAAVCGFPTTLTPEGLDLT 153

Query: 605 LGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKH---YNRGFAY 775
              N               + +  ARVVN+SS     G I    L G      +N+   Y
Sbjct: 154 FATNYTGPFLLTNLLQGALQRAGSARVVNVSSFRQSHGYIDEDHLIGAGRPLTFNQN--Y 211

Query: 776 CHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRH-SFLLCLLWRLFSRFLKTAR 952
             SKL    FT +LA+RLQGT VT  +V PG+V +++++H S+    L+ L S F K ++
Sbjct: 212 DCSKLLLASFTGKLAQRLQGTVVTVNSVDPGVVYTKIMKHFSWSYRFLFWLLSFFFKDSK 271

Query: 953 EGPRP 967
           +G  P
Sbjct: 272 QGAVP 276



 Score = 33.9 bits (76), Expect(2) = 8e-39
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 940  QNSAGGAQTSLHCALAEGLEPLSGKYF-SDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            ++S  GA   L+ +LA+ L+ +SGK+F S C        A++   A+ LWN S  L  +
Sbjct: 268  KDSKQGAVPVLYLSLAKELDGISGKHFSSSCVITLPPEAAQDPHVAQSLWNTSVRLTNL 326


>ref|XP_591168.4| PREDICTED: dehydrogenase/reductase (SDR family) X-linked [Bos
           taurus].
          Length = 237

 Score =  101 bits (251), Expect(2) = 2e-25
 Identities = 61/146 (41%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
 Frame = +2

Query: 482 KSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXXXXXXXXXX 661
           +SIR F + F  ++  LH+L+NNAGVM+ P   T DGFE H GVN               
Sbjct: 2   RSIREFVQTFKMKKLPLHVLVNNAGVMMVPQRTTEDGFEEHFGVNYLGHFLLTNLLLDTL 61

Query: 662 KAS-AP---ARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVLFTRELAKRL 829
           + S AP   ARVV +SS  H+ G++   DLQ   +Y+   AY  SKLA VLFT  L   L
Sbjct: 62  QESGAPGHSARVVTVSSATHYVGELNLDDLQSSTYYSAHAAYAQSKLALVLFTYHLQALL 121

Query: 830 --QGTGVTTYAVHPGIVQSELVRHSF 901
             QG  VT     PG+V ++L R+ F
Sbjct: 122 TAQGMPVTASVADPGVVDTDLYRYVF 147



 Score = 34.3 bits (77), Expect(2) = 2e-25
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI---QWE 1122
            GA TS++ A+   LE L G+Y  + K         + +   +LW  SC+L GI    WE
Sbjct: 168  GAWTSVYAAVTPALEGLGGRYLYNEKETRSLEATYDPELQRQLWARSCQLTGIADVTWE 226


>ref|NP_001093783.1| dehydrogenase/reductase SDR family member 12 [Bos taurus].
          Length = 317

 Score =  103 bits (257), Expect = 4e-22
 Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
 Frame = +2

Query: 278 MQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLV 457
           +Q+PG+  ++TG N+GIGK TA E+A+RG  V++ CRD  + E A +EI  ++ N  + +
Sbjct: 36  VQVPGRAFMVTGGNSGIGKATAMEIAKRGGTVHLVCRDHSRAEGAKAEIIRESGNQNIFL 95

Query: 458 RKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXX 637
             +DLS  KS+  F E F  +E  L++LINNAG M+     T DG E +   N       
Sbjct: 96  HIVDLSLPKSVWKFVENF-KQEHTLNVLINNAGCMVNKRELTEDGLEKNFATNTLGVYVL 154

Query: 638 XXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEK-HYNRGFAYCHSKLANVLFTRE 814
                   +     RV+ +SS      K+   D Q E+  ++    Y  +K   V+ T  
Sbjct: 155 TTALIPVLEKEHDPRVITVSSGGMLVQKLNTDDPQSERTAFDGTMVYAQNKRQQVVLTER 214

Query: 815 LAKRLQGTGVTTYAVHPGIVQSELVRHS 898
            A+      +    +HPG V +  VR S
Sbjct: 215 WAR--AHPAIHFSCMHPGWVDTPGVRLS 240


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 53,693,083
Number of extensions: 1533300
Number of successful extensions: 5450
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 5414
Number of HSP's successfully gapped: 37
Length of query: 454
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 348
Effective length of database: 14,174,046
Effective search space: 4932568008
Effective search space used: 4932568008
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Animal-Genome cDNA OVRT1_0146_C03

Animal-Genome cDNA OVRT1_0146_C03


Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRT1_0146_C03
         (1362 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_689656.2| retinol dehydrogenase 12 [Homo sapiens].             424   e-148
Alignment   gi|NP_057110.3| retinol dehydrogenase 11 [Homo sapiens].             350   e-114
Alignment   gi|NP_001139443.1| retinol dehydrogenase 13 isoform 1 [Homo sap...   225   6e-66
Alignment   gi|NP_065956.1| retinol dehydrogenase 14 [Homo sapiens].             202   1e-60
Alignment   gi|NP_653284.2| dehydrogenase/reductase SDR family member 13 pr...   166   4e-55
Alignment   gi|NP_612421.1| retinol dehydrogenase 13 isoform 2 [Homo sapien...   162   4e-47
Alignment   gi|NP_057457.1| WW domain-containing oxidoreductase isoform 1 [...   143   4e-42
Alignment   gi|NP_001186032.1| NT5C1B-RDH14 protein isoform 1 [Homo sapiens].    137   5e-41
Alignment   gi|NP_660160.2| dehydrogenase/reductase SDR family member on ch...   142   2e-38
Alignment   gi|NP_003699.3| retinol dehydrogenase 16 [Homo sapiens].              65   1e-10

>ref|NP_689656.2| retinol dehydrogenase 12 [Homo sapiens].
          Length = 316

 Score =  424 bits (1089), Expect(3) = e-148
 Identities = 214/250 (85%), Positives = 222/250 (88%)
 Frame = +2

Query: 209 FFFLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACR 388
           F FLY+ APSIRKFFAGGVCRTN+QLPGKVVVITGANTGIGKETARELA RGARVYIACR
Sbjct: 12  FSFLYMVAPSIRKFFAGGVCRTNVQLPGKVVVITGANTGIGKETARELASRGARVYIACR 71

Query: 389 DVLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLC 568
           DVLKGESAASEIR DTKNSQVLVRKLDLSDTKSIRAFAEGFL EEKQLHILINNAGVM+C
Sbjct: 72  DVLKGESAASEIRVDTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMC 131

Query: 569 PYSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGE 748
           PYSKTADGFETHLGVN               K SAPARVVN+SSV HH GKI FHDLQ E
Sbjct: 132 PYSKTADGFETHLGVNHLGHFLLTYLLLERLKVSAPARVVNVSSVAHHIGKIPFHDLQSE 191

Query: 749 KHYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLF 928
           K Y+RGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPG+V+SELVRHS LLCLLWRLF
Sbjct: 192 KRYSRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGVVRSELVRHSSLLCLLWRLF 251

Query: 929 SRFLKTAREG 958
           S F+KTAREG
Sbjct: 252 SPFVKTAREG 261



 Score =  119 bits (299), Expect(3) = e-148
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQWE 1122
            GAQTSLHCALAEGLEPLSGKYFSDCKR WVSPRARNNKTAERLWNVSCELLGI+WE
Sbjct: 261  GAQTSLHCALAEGLEPLSGKYFSDCKRTWVSPRARNNKTAERLWNVSCELLGIRWE 316



 Score = 22.3 bits (46), Expect(3) = e-148
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 175 MLAVLGLLTSFLFF 216
           ML  LGLLTSF  F
Sbjct: 1   MLVTLGLLTSFFSF 14


>ref|NP_057110.3| retinol dehydrogenase 11 [Homo sapiens].
          Length = 318

 Score =  350 bits (898), Expect(2) = e-114
 Identities = 170/249 (68%), Positives = 200/249 (80%)
 Frame = +2

Query: 212 FFLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRD 391
           F LY+ AP IRK  + GVC + +QLPGKVVV+TGANTGIGKETA+ELA+RGARVY+ACRD
Sbjct: 15  FLLYMAAPQIRKMLSSGVCTSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRD 74

Query: 392 VLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCP 571
           V KGE  A EI+  T N QVLVRKLDLSDTKSIRAFA+GFL EEK LH+LINNAGVM+CP
Sbjct: 75  VEKGELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCP 134

Query: 572 YSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEK 751
           YSKTADGFE H+GVN               K SAP+R+VN+SS+ HH G+I FH+LQGEK
Sbjct: 135 YSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIVNVSSLAHHLGRIHFHNLQGEK 194

Query: 752 HYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS 931
            YN G AYCHSKLAN+LFT+ELA+RL+G+GVTTY+VHPG VQSELVRHS  +  +W LFS
Sbjct: 195 FYNAGLAYCHSKLANILFTQELARRLKGSGVTTYSVHPGTVQSELVRHSSFMRWMWWLFS 254

Query: 932 RFLKTAREG 958
            F+KT ++G
Sbjct: 255 FFIKTPQQG 263



 Score = 82.8 bits (203), Expect(2) = e-114
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTSLHCAL EGLE LSG +FSDC  AWVS +ARN   A RLW+VSC+LLG+
Sbjct: 263  GAQTSLHCALTEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLLGL 315


>ref|NP_001139443.1| retinol dehydrogenase 13 isoform 1 [Homo sapiens].
          Length = 331

 Score =  225 bits (574), Expect(2) = 6e-66
 Identities = 115/221 (52%), Positives = 150/221 (67%), Gaps = 1/221 (0%)
 Frame = +2

Query: 239 IRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAAS 418
           ++ +  GG C +   +PGK V++TGANTGIGK+TA ELARRG  + +ACRD+ K E+AA 
Sbjct: 21  LKDYVTGGACPSKATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAK 80

Query: 419 EIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFE 598
           +IR +T N  V  R LDL+  KSIR FA   + EE+++ ILINNAGVM CP+  T DGFE
Sbjct: 81  DIRGETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWTTEDGFE 140

Query: 599 THLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGE-KHYNRGFAY 775
              GVN               KASAP+R++NLSS+ H AG I F DL  + + YN   AY
Sbjct: 141 MQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWQTRKYNTKAAY 200

Query: 776 CHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHS 898
           C SKLA VLFT+EL++RLQG+GVT  A+HPG+ ++EL RH+
Sbjct: 201 CQSKLAIVLFTKELSRRLQGSGVTVNALHPGVARTELGRHT 241



 Score = 45.4 bits (106), Expect(2) = 6e-66
 Identities = 22/53 (41%), Positives = 32/53 (60%)
 Frame = +1

Query: 958  AQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQ 1116
            AQ S + A+AE L  +SGKYF   K+   +P A + + A RLW  S  L+G++
Sbjct: 268  AQPSTYLAVAEELADVSGKYFDGLKQKAPAPEAEDEEVARRLWAESARLVGLE 320


>ref|NP_065956.1| retinol dehydrogenase 14 [Homo sapiens].
          Length = 336

 Score =  202 bits (514), Expect(2) = 1e-60
 Identities = 109/240 (45%), Positives = 148/240 (61%), Gaps = 17/240 (7%)
 Frame = +2

Query: 290 GKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNS-------- 445
           GK V+ITGAN+G+G+ TA EL R GARV + CRD  + E AA ++R + + +        
Sbjct: 43  GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPG 102

Query: 446 -----QVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLG 610
                +++VR+LDL+  +S+RAF +  L EE +L +LINNAG+  CPY KT DGFE   G
Sbjct: 103 VSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFG 162

Query: 611 VNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKL 790
           VN               K+SAP+R+V +SS ++  G I F DL  E+ YN+ F Y  SKL
Sbjct: 163 VNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFDDLNSEQSYNKSFCYSRSKL 222

Query: 791 ANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS----RFLKTAREG 958
           AN+LFTRELA+RL+GT VT   +HPGIV++ L RH  +  L+  LF+     F KT  EG
Sbjct: 223 ANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVSWAFFKTPVEG 282



 Score = 50.4 bits (119), Expect(2) = 1e-60
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTS++ A +  +E +SG+YF DCK   + P+A +   A +LW++S  ++G+
Sbjct: 282  GAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGL 334


>ref|NP_653284.2| dehydrogenase/reductase SDR family member 13 precursor [Homo
           sapiens].
          Length = 377

 Score =  166 bits (419), Expect(2) = 4e-55
 Identities = 99/209 (47%), Positives = 130/209 (62%), Gaps = 5/209 (2%)
 Frame = +2

Query: 284 LPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRK 463
           L G+  V+TGAN+GIGK TA ELARRGARV +ACR   +GE+AA ++R ++ N++V+   
Sbjct: 34  LRGRTAVVTGANSGIGKMTALELARRGARVVLACRSQERGEAAAFDLRQESGNNEVIFMA 93

Query: 464 LDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXXXX 643
           LDL+   S+RAFA  FL+ E +L ILI+NAG+  C   +T + F   L VN         
Sbjct: 94  LDLASLASVRAFATAFLSSEPRLDILIHNAGISSC--GRTREAFNLLLRVNHIGPFLLTH 151

Query: 644 XXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQ----GEKHYNRGFAYCHSKLANVLFTR 811
                 KA AP+RVV ++S  H  G++ F  L     G +   R  AY  +KLANVLF R
Sbjct: 152 LLLPCLKACAPSRVVVVASAAHCRGRLDFKRLDRPVVGWRQELR--AYADTKLANVLFAR 209

Query: 812 ELAKRLQGTGVTTYAVHPGIVQSEL-VRH 895
           ELA +L+ TGVT YA HPG V SEL +RH
Sbjct: 210 ELANQLEATGVTCYAAHPGPVNSELFLRH 238



 Score = 68.9 bits (167), Expect(2) = 4e-55
 Identities = 35/81 (43%), Positives = 47/81 (58%)
 Frame = +1

Query: 952  GGAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQWE*SC 1131
            GGAQT L+CAL EG+EPLSG+YF++C    V P AR+++ A RLW  S  L G+      
Sbjct: 260  GGAQTPLYCALQEGIEPLSGRYFANCHVEEVPPAARDDRAAHRLWEASKRLAGL------ 313

Query: 1132 WKMRGCIKPGPGHNADRGDGP 1194
                     GPG +A+  + P
Sbjct: 314  ---------GPGEDAEPDEDP 325


>ref|NP_612421.1| retinol dehydrogenase 13 isoform 2 [Homo sapiens].
          Length = 260

 Score =  162 bits (410), Expect(2) = 4e-47
 Identities = 87/168 (51%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
 Frame = +2

Query: 398 KGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYS 577
           K E+AA +IR +T N  V  R LDL+  KSIR FA   + EE+++ ILINNAGVM CP+ 
Sbjct: 3   KCEAAAKDIRGETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHW 62

Query: 578 KTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGE-KH 754
            T DGFE   GVN               KASAP+R++NLSS+ H AG I F DL  + + 
Sbjct: 63  TTEDGFEMQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWQTRK 122

Query: 755 YNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHS 898
           YN   AYC SKLA VLFT+EL++RLQG+GVT  A+HPG+ ++EL RH+
Sbjct: 123 YNTKAAYCQSKLAIVLFTKELSRRLQGSGVTVNALHPGVARTELGRHT 170



 Score = 45.4 bits (106), Expect(2) = 4e-47
 Identities = 22/53 (41%), Positives = 32/53 (60%)
 Frame = +1

Query: 958  AQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQ 1116
            AQ S + A+AE L  +SGKYF   K+   +P A + + A RLW  S  L+G++
Sbjct: 197  AQPSTYLAVAEELADVSGKYFDGLKQKAPAPEAEDEEVARRLWAESARLVGLE 249


>ref|NP_057457.1| WW domain-containing oxidoreductase isoform 1 [Homo sapiens].
          Length = 414

 Score =  143 bits (361), Expect(2) = 4e-42
 Identities = 95/257 (36%), Positives = 134/257 (52%), Gaps = 13/257 (5%)
 Frame = +2

Query: 227 TAPSIRKFFAGGVCRTNM----QLPGKVVVITGANTGIGKETARELARRGARVYIACRDV 394
           T P+ R+ + G      +       GKVVV+TGAN+GIG ETA+  A  GA V +ACR++
Sbjct: 99  TKPTTRQRYDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNM 158

Query: 395 LKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPY 574
            +   A S I  +   ++V    LDL+  +S++ FAE F  +   LH+L+ NA     P+
Sbjct: 159 ARASEAVSRILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPW 218

Query: 575 SKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHH-------AGKIRFH 733
           S T DG ET   VN                 SAPARV+ +SS  H         GK+ F 
Sbjct: 219 SLTKDGLETTFQVNHLGHFYLVQLLQDVLCRSAPARVIVVSSESHRFTDINDSLGKLDFS 278

Query: 734 DLQGEKH-YNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPG-IVQSELVRHSFLL 907
            L   K+ Y    AY  SKL N+LF+ EL +RL   GVT+ AVHPG ++ S + R  ++ 
Sbjct: 279 RLSPTKNDYWAMLAYNRSKLCNILFSNELHRRLSPRGVTSNAVHPGNMMYSNIHRSWWVY 338

Query: 908 CLLWRLFSRFLKTAREG 958
            LL+ L   F K+ ++G
Sbjct: 339 TLLFTLARPFTKSMQQG 355



 Score = 47.8 bits (112), Expect(2) = 4e-42
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELL 1107
            GA T+++CA    LE L G YF++C R   SP A++ +TA  LW +S  L+
Sbjct: 355  GAATTVYCAAVPELEGLGGMYFNNCCRCMPSPEAQSEETARTLWALSERLI 405


>ref|NP_001186032.1| NT5C1B-RDH14 protein isoform 1 [Homo sapiens].
          Length = 650

 Score =  137 bits (344), Expect(2) = 5e-41
 Identities = 73/151 (48%), Positives = 93/151 (61%), Gaps = 4/151 (2%)
 Frame = +2

Query: 518 EEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLS 697
           EE +L +LINNAG+  CPY KT DGFE   GVN               K+SAP+R+V +S
Sbjct: 446 EEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSAPSRIVVVS 505

Query: 698 SVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQ 877
           S ++  G I F DL  E+ YN+ F Y  SKLAN+LFTRELA+RL+GT VT   +HPGIV+
Sbjct: 506 SKLYKYGDINFDDLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVR 565

Query: 878 SELVRHSFLLCLLWRLFS----RFLKTAREG 958
           + L RH  +  L+  LF+     F KT  EG
Sbjct: 566 TNLGRHIHIPLLVKPLFNLVSWAFFKTPVEG 596



 Score = 50.4 bits (119), Expect(2) = 5e-41
 Identities = 21/53 (39%), Positives = 36/53 (67%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTS++ A +  +E +SG+YF DCK   + P+A +   A +LW++S  ++G+
Sbjct: 596  GAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGL 648


>ref|NP_660160.2| dehydrogenase/reductase SDR family member on chromosome X precursor
           [Homo sapiens].
          Length = 330

 Score =  142 bits (357), Expect(2) = 2e-38
 Identities = 91/236 (38%), Positives = 121/236 (51%), Gaps = 12/236 (5%)
 Frame = +2

Query: 287 PGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKL 466
           P +V ++TG   GIG  TA+ LAR G  V IA  +  K +   S+I+ +T N +V     
Sbjct: 42  PDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYC 101

Query: 467 DLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXXXXX 646
           DL+   SIR F + F  ++  LH+LINNAGVM+ P  KT DGFE H G+N          
Sbjct: 102 DLASMTSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNL 161

Query: 647 XXXXXKASA----PARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVLFTRE 814
                K S      ARVV +SS  H+  ++   DLQ    Y+   AY  SKLA VLFT  
Sbjct: 162 LLDTLKESGSPGHSARVVTVSSATHYVAELNMDDLQSSACYSPHAAYAQSKLALVLFTYH 221

Query: 815 LAKRL--QGTGVTTYAVHPGIVQSELVRHSFLLCLL------WRLFSRFLKTAREG 958
           L + L  +G+ VT   V PG+V +++ +H F    L      W LF    KT  EG
Sbjct: 222 LQRLLAAEGSHVTANVVDPGVVNTDVYKHVFWATRLAKKLLGWLLF----KTPDEG 273



 Score = 36.6 bits (83), Expect(2) = 2e-38
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GA TS++ A+   LE + G Y  + K         N K  ++LW+ SCE+ G+
Sbjct: 273  GAWTSIYAAVTPELEGVGGHYLYNEKETKSLHVTYNQKLQQQLWSKSCEMTGV 325


>ref|NP_003699.3| retinol dehydrogenase 16 [Homo sapiens].
          Length = 317

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 67/229 (29%), Positives = 95/229 (41%), Gaps = 5/229 (2%)
 Frame = +2

Query: 284 LPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRK 463
           L  K V ITG ++G GK  AR+L  RG RV  AC      E  A ++R  T +    V  
Sbjct: 27  LRDKYVFITGCDSGFGKLLARQLDARGLRVLAACLT----EKGAEQLRGQTSDRLETV-T 81

Query: 464 LDLSDTKSIRAFAEGF--LTEEKQLHILINNAGVMLCPYSK---TADGFETHLGVNXXXX 628
           LD++ T+S+ A A+       +K L  L+NNAG+ L        T   F T L VN    
Sbjct: 82  LDVTKTESVAAAAQWVKECVRDKGLWGLVNNAGISLPTAPNELLTKQDFVTILDVNLLGV 141

Query: 629 XXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVLFT 808
                      +  A  RVVN+SSV+   G++             G  YC SK     F+
Sbjct: 142 IDVTLSLLPLVR-RARGRVVNVSSVM---GRVSLF----------GGGYCISKYGVEAFS 187

Query: 809 RELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFSRFLKTARE 955
             L + L   GV    + PG  ++ +      L     ++ R     +E
Sbjct: 188 DSLRRELSYFGVKVAMIEPGYFKTAVTSKERFLKSFLEIWDRSSPEVKE 236


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 54,672,432
Number of extensions: 1522616
Number of successful extensions: 5441
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 5407
Number of HSP's successfully gapped: 38
Length of query: 454
Length of database: 18,297,164
Length adjustment: 106
Effective length of query: 348
Effective length of database: 14,802,980
Effective search space: 5151437040
Effective search space used: 5151437040
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRT1_0146_C03
         (1362 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 ...   412   e-144
Alignment   gi|XP_854354.1| PREDICTED: similar to Retinol dehydrogenase 11 ...   329   e-107
Alignment   gi|XP_854127.1| PREDICTED: similar to Retinol dehydrogenase 13 ...   231   2e-68
Alignment   gi|XP_540096.2| PREDICTED: similar to retinol dehydrogenase 14 ...   200   3e-60
Alignment   gi|XP_548293.2| PREDICTED: similar to retinol dehydrogenase 11 ...   167   1e-54
Alignment   gi|XP_857582.1| PREDICTED: similar to retinol dehydrogenase 14 ...   146   3e-44
Alignment   gi|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 ...   154   7e-42
Alignment   gi|XP_852623.1| PREDICTED: similar to WW domain-containing oxid...   144   2e-34
Alignment   gi|XP_852222.1| PREDICTED: similar to dehydrogenase/reductase (...   142   6e-34
Alignment   gi|XP_857503.1| PREDICTED: similar to retinol dehydrogenase 14 ...    70   6e-12

>ref|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 (all-trans and
           9-cis) [Canis familiaris].
          Length = 303

 Score =  412 bits (1058), Expect(2) = e-144
 Identities = 206/239 (86%), Positives = 215/239 (89%)
 Frame = +2

Query: 242 RKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASE 421
           RKFFAGGVCR+N+QLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASE
Sbjct: 10  RKFFAGGVCRSNVQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASE 69

Query: 422 IRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFET 601
           IRADTKNSQVLVRKLDLSDTKSIRAFAEGFL EEKQLHILINNAGVM+CPYSKTADGFET
Sbjct: 70  IRADTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFET 129

Query: 602 HLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCH 781
           HLGVN               K S PARVVNLSSV HH GKI FHDLQGEK Y+RGFAYCH
Sbjct: 130 HLGVNHLGHFLLTHLLLERLKESTPARVVNLSSVAHHIGKIHFHDLQGEKRYSRGFAYCH 189

Query: 782 SKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFSRFLKTAREG 958
           SKLAN+LFTRELAKRLQGTGVTTYAVHPG+V SELVRHSFLLCLLWR+FS F+K+AREG
Sbjct: 190 SKLANMLFTRELAKRLQGTGVTTYAVHPGVVSSELVRHSFLLCLLWRIFSPFVKSAREG 248



 Score =  119 bits (299), Expect(2) = e-144
 Identities = 54/56 (96%), Positives = 56/56 (100%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQWE 1122
            GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRAR+NKTAERLWNVSCELLGIQW+
Sbjct: 248  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARDNKTAERLWNVSCELLGIQWD 303


>ref|XP_854354.1| PREDICTED: similar to Retinol dehydrogenase 11 (Retinal reductase
           1) (RalR1) (Prostate short-chain dehydrogenase/reductase
           1) (Androgen-regulated short-chain
           dehydrogenase/reductase 1) (HCV core-binding protein
           HCBP12) [Canis familiaris].
          Length = 337

 Score =  329 bits (843), Expect(2) = e-107
 Identities = 159/240 (66%), Positives = 191/240 (79%)
 Frame = +2

Query: 239 IRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAAS 418
           + K  + GVC + +QLPGKV V+TGANTGIGKETA+ELA+RGARVY+ACRDVLKGE  A 
Sbjct: 43  LMKILSRGVCTSTVQLPGKVAVVTGANTGIGKETAKELAQRGARVYLACRDVLKGELVAR 102

Query: 419 EIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFE 598
           EI+  T N QVLVRKLDL+DTKSIRAFA+GFL EEK LHILINNAGVM+CPY+KT DGFE
Sbjct: 103 EIQTMTGNKQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYTKTVDGFE 162

Query: 599 THLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYC 778
            H+GVN               K SAP+R+VN+SS+ HH G+I FHDLQGEK YN G AYC
Sbjct: 163 MHMGVNHLGHFLLTHLLLEKLKESAPSRIVNVSSLAHHLGRIHFHDLQGEKFYNSGLAYC 222

Query: 779 HSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFSRFLKTAREG 958
           HSKLAN+LFT+ELA+RL+G+G+T Y+VHPG V+SELVRHS  +  +W LFS F+KT ++G
Sbjct: 223 HSKLANILFTQELARRLKGSGITAYSVHPGTVKSELVRHSPFMKWMWWLFSFFIKTPQQG 282



 Score = 80.9 bits (198), Expect(2) = e-107
 Identities = 37/53 (69%), Positives = 43/53 (81%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTSL+CA+ EGLE LSG +FSDC  AWVS +ARN   A RLW+VSC+LLGI
Sbjct: 282  GAQTSLYCAITEGLEVLSGHHFSDCSVAWVSAQARNETIARRLWDVSCDLLGI 334


>ref|XP_854127.1| PREDICTED: similar to Retinol dehydrogenase 13 [Canis familiaris].
          Length = 334

 Score =  231 bits (590), Expect(2) = 2e-68
 Identities = 118/221 (53%), Positives = 151/221 (68%), Gaps = 1/221 (0%)
 Frame = +2

Query: 239 IRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAAS 418
           +R + AGG C +   +PGK V++TGANTGIGK+TA ELARRG  + +ACRD+ K E+AA 
Sbjct: 21  LRDYIAGGACPSKATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAK 80

Query: 419 EIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFE 598
           EIR +T N +V    LDL+  KSIR FA   + EE+Q+HIL+NNA VM CP+  T DGFE
Sbjct: 81  EIRGETLNHRVSAWHLDLASLKSIREFAAKIIEEEEQVHILVNNAAVMRCPHWTTKDGFE 140

Query: 599 THLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKH-YNRGFAY 775
              GVN               KASAP+R++NLSS+ H AG I F DL  EK  Y+   AY
Sbjct: 141 MQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWEKRKYDTKAAY 200

Query: 776 CHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHS 898
           C SKLA +LFT+EL++RLQGTGVT  A+HPG+ ++EL RH+
Sbjct: 201 CQSKLAVILFTKELSRRLQGTGVTVNALHPGVARTELGRHT 241



 Score = 47.8 bits (112), Expect(2) = 2e-68
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = +1

Query: 958  AQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQ 1116
            AQ S + A+AE LE +SGKYF   K    +P A + + A+RLW  S  L+G++
Sbjct: 268  AQPSTYLAVAEELEGVSGKYFDGLKEKAPAPEAEDEEVAQRLWAESARLVGLE 320


>ref|XP_540096.2| PREDICTED: similar to retinol dehydrogenase 14 (all-trans and
           9-cis) isoform 1 [Canis familiaris].
          Length = 336

 Score =  200 bits (508), Expect(2) = 3e-60
 Identities = 111/259 (42%), Positives = 154/259 (59%), Gaps = 17/259 (6%)
 Frame = +2

Query: 233 PSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESA 412
           P +++   GG    +  + GK V+ITGAN+G+G+ TA  L R GARV + CRD  + E A
Sbjct: 27  PGVQQLHGGG---DSGLMHGKTVLITGANSGLGRATAAALLRLGARVIMGCRDRARAEEA 83

Query: 413 ASEIRADTKNS-------------QVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNA 553
           A ++R + + +             +++VR+LDL+  +S+RAF +  L EE +L +LINNA
Sbjct: 84  AGQLRRELRQAGGREPGSDVGAAGELVVRELDLASLRSVRAFCQEVLQEEPRLDVLINNA 143

Query: 554 GVMLCPYSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFH 733
           G+  CPY KT DGFE   GVN               K SAP+R+V +SS ++  G I F 
Sbjct: 144 GIFQCPYMKTEDGFEMQFGVNHLGHFLLTNLLLGLLKNSAPSRIVVVSSKLYKYGDINFE 203

Query: 734 DLQGEKHYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCL 913
           DL  E+ YN+ F Y  SKLAN+LFTRELA+RL+GT VT   +HPGIV++ L RH  +  L
Sbjct: 204 DLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLL 263

Query: 914 LWRLFS----RFLKTAREG 958
           +  LF+     F KT  EG
Sbjct: 264 VRPLFNLVSWAFFKTPVEG 282



 Score = 52.0 bits (123), Expect(2) = 3e-60
 Identities = 23/53 (43%), Positives = 36/53 (67%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTS++ A +  +E +SGKYF DCK   + P+A +   A +LW++S  ++GI
Sbjct: 282  GAQTSVYLASSPEVEGVSGKYFGDCKEEELLPKAMDESVARKLWDISEVMVGI 334


>ref|XP_548293.2| PREDICTED: similar to retinol dehydrogenase 11 (predicted) [Canis
           familiaris].
          Length = 377

 Score =  167 bits (423), Expect(2) = 1e-54
 Identities = 109/238 (45%), Positives = 139/238 (58%), Gaps = 7/238 (2%)
 Frame = +2

Query: 266 CRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNS 445
           C     L G+  V+TGAN+GIGK TA ELARRGARV +ACR   +GE+AA ++R ++ N+
Sbjct: 28  CGGIASLRGRTAVVTGANSGIGKMTALELARRGARVVLACRSRERGEAAAFDLRQESGNN 87

Query: 446 QVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXX 625
           +V+   LDL+   S+RAFA  FL+ E +L ILI+NAG+  C   +T   F   L VN   
Sbjct: 88  EVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSC--GRTHKPFNLLLRVNHIG 145

Query: 626 XXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQ----GEKHYNRGFAYCHSKLA 793
                       K  AP+RVV +SS  H  G++ F  L     G +   R  AY  SKLA
Sbjct: 146 PFLLTHLLLPRLKTCAPSRVVVVSSAAHRRGRLDFTRLDRPVVGWQQELR--AYADSKLA 203

Query: 794 NVLFTRELAKRLQGTGVTTYAVHPGIVQSEL-VRH--SFLLCLLWRLFSRFLKTAREG 958
           NVLF RELA +L+GTGVT YA HPG V SEL +RH   +L  LL  L    L+  R G
Sbjct: 204 NVLFARELATQLEGTGVTCYAAHPGPVNSELFLRHVPGWLCPLLRPLAWLMLRAPRGG 261



 Score = 65.5 bits (158), Expect(2) = 1e-54
 Identities = 29/54 (53%), Positives = 39/54 (72%)
 Frame = +1

Query: 952  GGAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GGAQT L+CAL EG+EPLSG+YF++C    V P AR+++ A +LW  S  L G+
Sbjct: 260  GGAQTPLYCALQEGIEPLSGRYFANCHVEEVPPAARDDRAAHQLWEASKRLAGL 313


>ref|XP_857582.1| PREDICTED: similar to retinol dehydrogenase 14 (all-trans and
           9-cis) isoform 4 [Canis familiaris].
          Length = 307

 Score =  146 bits (369), Expect(2) = 3e-44
 Identities = 93/259 (35%), Positives = 133/259 (51%), Gaps = 17/259 (6%)
 Frame = +2

Query: 233 PSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESA 412
           P +++   GG    +  + GK V+ITGAN+G+G+ TA  L R GARV + CRD  + E A
Sbjct: 27  PGVQQLHGGG---DSGLMHGKTVLITGANSGLGRATAAALLRLGARVIMGCRDRARAEEA 83

Query: 413 ASEIRADTKNS-------------QVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNA 553
           A ++R + + +             +++VR+LDL+  +S+RAF +  L             
Sbjct: 84  AGQLRRELRQAGGREPGSDVGAAGELVVRELDLASLRSVRAFCQEVL------------- 130

Query: 554 GVMLCPYSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFH 733
                             GVN               K SAP+R+V +SS ++  G I F 
Sbjct: 131 ----------------QFGVNHLGHFLLTNLLLGLLKNSAPSRIVVVSSKLYKYGDINFE 174

Query: 734 DLQGEKHYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCL 913
           DL  E+ YN+ F Y  SKLAN+LFTRELA+RL+GT VT   +HPGIV++ L RH  +  L
Sbjct: 175 DLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLL 234

Query: 914 LWRLFS----RFLKTAREG 958
           +  LF+     F KT  EG
Sbjct: 235 VRPLFNLVSWAFFKTPVEG 253



 Score = 52.0 bits (123), Expect(2) = 3e-44
 Identities = 23/53 (43%), Positives = 36/53 (67%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTS++ A +  +E +SGKYF DCK   + P+A +   A +LW++S  ++GI
Sbjct: 253  GAQTSVYLASSPEVEGVSGKYFGDCKEEELLPKAMDESVARKLWDISEVMVGI 305


>ref|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 [Canis familiaris].
          Length = 596

 Score =  154 bits (388), Expect(2) = 7e-42
 Identities = 95/236 (40%), Positives = 137/236 (58%), Gaps = 2/236 (0%)
 Frame = +2

Query: 266  CRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNS 445
            C T+  L GK  V+TGAN+GIGK   +ELARRGARV +ACR+  +G+ A +EI+  +K +
Sbjct: 309  CSTD--LTGKTAVVTGANSGIGKAVCQELARRGARVILACRNWERGQKALAEIQVASKGT 366

Query: 446  QVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXX 625
             +L+ ++DLS   SIR+FA   L E  ++H+L+NNA +   P + T +G +     N   
Sbjct: 367  CLLLGQVDLSSMASIRSFARWLLQEYPEIHLLVNNAAISGFPKTLTPEGLDLTFATNYVG 426

Query: 626  XXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGE-KHYNRGFAYCHSKLANVL 802
                        + +  ARVVN+SS  H  G +    L G  K  N   +Y  SKL    
Sbjct: 427  PFLLTNLLQGALQRAGSARVVNVSSFRHAHGYVDEKHLTGAGKPLNLIQSYDCSKLLLTS 486

Query: 803  FTRELAKRLQGTGVTTYAVHPGIVQSELVR-HSFLLCLLWRLFSRFLKTAREGPRP 967
            FT ELA+RLQGTGVT  +V PG+V +E+++ + +L   L+ LFS F K  ++G  P
Sbjct: 487  FTGELARRLQGTGVTVNSVDPGVVYTEIMKPYPWLYRFLFWLFSFFCKDVKQGAIP 542



 Score = 36.6 bits (83), Expect(2) = 7e-42
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYF-SDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GA   L+ +LA+ L+ +SGKYF S C     +  A++ + A+ LWN S +L  +
Sbjct: 539  GAIPVLYLSLAKELDGVSGKYFSSSCMITLPTEAAQDPQVAQSLWNASVQLTNL 592


>ref|XP_852623.1| PREDICTED: similar to WW domain-containing oxidoreductase isoform 1
           [Canis familiaris].
          Length = 383

 Score =  144 bits (363), Expect = 2e-34
 Identities = 95/253 (37%), Positives = 134/253 (52%), Gaps = 13/253 (5%)
 Frame = +2

Query: 227 TAPSIRKFFAGGVCRTNM----QLPGKVVVITGANTGIGKETARELARRGARVYIACRDV 394
           T P+ R+ + GG     +       GKVVV+TGAN+GIG ETA+  A  GA V +ACR++
Sbjct: 99  TKPTSRQRYDGGTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNM 158

Query: 395 LKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPY 574
            +   A S+I  +   ++V    LDL+  +S++ FA+ F  +   LH+L+ NA     P+
Sbjct: 159 TRANEAVSQILGEWHKAKVEAMTLDLALLRSVQHFAQAFKAKNVSLHVLVCNAAAFALPW 218

Query: 575 SKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHH-------AGKIRFH 733
           S T DG ET   VN                 SAPARVV +SS  H        +GK+ F 
Sbjct: 219 SLTKDGLETTFQVNHLGHFYLVQLLQDVLCRSAPARVVVVSSESHRFTDINDSSGKLDFS 278

Query: 734 DLQGEK-HYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPG-IVQSELVRHSFLL 907
            L   K  Y    AY  SKL N+LF+ EL +RL   GVT+ AVHPG ++ S + R+ ++ 
Sbjct: 279 RLSPSKSDYWAMLAYNRSKLCNILFSNELHRRLSPRGVTSNAVHPGNMMYSSIHRNWWVY 338

Query: 908 CLLWRLFSRFLKT 946
            LL+ L   F K+
Sbjct: 339 TLLFTLARPFTKS 351


>ref|XP_852222.1| PREDICTED: similar to dehydrogenase/reductase (SDR family) X-linked
           [Canis familiaris].
          Length = 387

 Score =  142 bits (359), Expect = 6e-34
 Identities = 93/232 (40%), Positives = 124/232 (53%), Gaps = 8/232 (3%)
 Frame = +2

Query: 287 PGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKL 466
           P +V ++TG   GIG  TA+ LAR G  V +A  +         +I+ +T N +V     
Sbjct: 94  PERVAIVTGGTDGIGYSTAKHLARLGMHVILAGNNDSSAPDVVRKIQEETLNDKVEFLYC 153

Query: 467 DLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXXXXX 646
           DL+  +SIR F + F  ++  LH+L+NNAGVM+ P   T DGFE H G+N          
Sbjct: 154 DLASLRSIRQFVQKFKKKKIPLHVLVNNAGVMMVPERTTEDGFEEHFGLNYLGHFLLTNL 213

Query: 647 XXXXXKAS-AP---ARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVLFTRE 814
                K S AP   ARVV +SS  H+ G++   DLQG + Y+   AY  SKLA VLFT  
Sbjct: 214 LLDTLKESGAPGRCARVVTVSSATHYIGELDMDDLQGSRCYSPHAAYAQSKLALVLFTYH 273

Query: 815 LAKRL--QGTGVTTYAVHPGIVQSELVRHSFL-LCLLWRLFS-RFLKTAREG 958
           L + L  QG+ VT   V PG+V + L RH F    L+ +LF   F KT  EG
Sbjct: 274 LQRLLAAQGSPVTANVVDPGVVNTNLYRHVFWGTRLIKKLFGWWFFKTPDEG 325


>ref|XP_857503.1| PREDICTED: similar to retinol dehydrogenase 14 (all-trans and
           9-cis) isoform 3 [Canis familiaris].
          Length = 153

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 13/111 (11%)
 Frame = +2

Query: 233 PSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESA 412
           P +++   GG    +  + GK V+ITGAN+G+G+ TA  L R GARV + CRD  + E A
Sbjct: 27  PGVQQLHGGG---DSGLMHGKTVLITGANSGLGRATAAALLRLGARVIMGCRDRARAEEA 83

Query: 413 ASEIRADTKNS-------------QVLVRKLDLSDTKSIRAFAEGFLTEEK 526
           A ++R + + +             +++VR+LDL+  +S+RAF +  L   K
Sbjct: 84  AGQLRRELRQAGGREPGSDVGAAGELVVRELDLASLRSVRAFCQEVLQGRK 134


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 55,730,960
Number of extensions: 1551610
Number of successful extensions: 5952
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 5913
Number of HSP's successfully gapped: 35
Length of query: 454
Length of database: 18,874,504
Length adjustment: 106
Effective length of query: 348
Effective length of database: 15,340,888
Effective search space: 5338629024
Effective search space used: 5338629024
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA OVRT1_0146_C03

Animal-Genome cDNA OVRT1_0146_C03


Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRT1_0146_C03
         (1362 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_084293.1| retinol dehydrogenase 12 [Mus musculus].             390   e-136
Alignment   gi|NP_067532.2| retinol dehydrogenase 11 [Mus musculus].             341   e-111
Alignment   gi|NP_780581.1| retinol dehydrogenase 13 [Mus musculus].             221   4e-65
Alignment   gi|NP_076186.1| retinol dehydrogenase 14 [Mus musculus].             204   9e-62
Alignment   gi|NP_899109.2| dehydrogenase/reductase SDR family member 13 pr...   167   1e-55
Alignment   gi|NP_062519.2| WW domain-containing oxidoreductase [Mus muscul...   141   2e-41
Alignment   gi|NP_001028498.2| dehydrogenase/reductase SDR family member on...   144   3e-37
Alignment   gi|NP_079798.2| dehydrogenase/reductase SDR family member 7 pre...    69   9e-12
Alignment   gi|NP_780721.1| dehydrogenase/reductase SDR family member 9 pre...    64   4e-10
Alignment   gi|NP_766635.1| carbonyl reductase 3 [Mus musculus].                  59   7e-09

>ref|NP_084293.1| retinol dehydrogenase 12 [Mus musculus].
          Length = 316

 Score =  390 bits (1001), Expect(2) = e-136
 Identities = 197/247 (79%), Positives = 211/247 (85%)
 Frame = +2

Query: 218 LYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVL 397
           LY+TAPSIRKFFAGGVC TN+Q+PGKVVVITGANTGIGKETARELARRGARVYIACRDVL
Sbjct: 15  LYLTAPSIRKFFAGGVCTTNVQIPGKVVVITGANTGIGKETARELARRGARVYIACRDVL 74

Query: 398 KGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYS 577
           KGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAE FL EEK+LHILINNAGVM+CPYS
Sbjct: 75  KGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYS 134

Query: 578 KTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHY 757
           KT DGFETH GVN               K SAPARVVNLSS+ H  GKIRFHDLQG+K Y
Sbjct: 135 KTTDGFETHFGVNHLGHFLLTYLLLERLKESAPARVVNLSSIAHLIGKIRFHDLQGQKRY 194

Query: 758 NRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFSRF 937
              FAY HSKLAN+LFTRELAKRLQGTGVT YAVHPG+V SE+ R+S+LLCLLWRLFS F
Sbjct: 195 CSAFAYGHSKLANLLFTRELAKRLQGTGVTAYAVHPGVVLSEITRNSYLLCLLWRLFSPF 254

Query: 938 LKTAREG 958
            K+  +G
Sbjct: 255 FKSTSQG 261



 Score =  113 bits (283), Expect(2) = e-136
 Identities = 52/61 (85%), Positives = 56/61 (91%)
 Frame = +1

Query: 940  QNSAGGAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQW 1119
            ++++ GAQTSLHCALAE LEPLSGKYFSDCKR WVS RARN KTAERLWNVSCELLGIQW
Sbjct: 256  KSTSQGAQTSLHCALAEDLEPLSGKYFSDCKRMWVSSRARNKKTAERLWNVSCELLGIQW 315

Query: 1120 E 1122
            E
Sbjct: 316  E 316


>ref|NP_067532.2| retinol dehydrogenase 11 [Mus musculus].
          Length = 316

 Score =  341 bits (874), Expect(2) = e-111
 Identities = 166/249 (66%), Positives = 199/249 (79%)
 Frame = +2

Query: 212 FFLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRD 391
           F LY+  P IRK  + GVC +N+QLPGKV ++TGANTGIGKETA++LA+RGARVY+ACRD
Sbjct: 12  FILYLVTPKIRKMLSSGVCTSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRD 71

Query: 392 VLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCP 571
           V KGE AA EI+A T NSQV VRKLDL+DTKSIRAFA+ FL EEK LH+LINNAGVM+CP
Sbjct: 72  VDKGELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCP 131

Query: 572 YSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEK 751
           YSKTADGFE H+GVN               K SAP+R+VNLSS+ HH G+I FH+LQGEK
Sbjct: 132 YSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESAPSRIVNLSSLGHHLGRIHFHNLQGEK 191

Query: 752 HYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS 931
            Y+ G AYCHSKLAN+LFT+ELAKRL+G+GVTTY+VHPG V SEL R+S ++  LW+LF 
Sbjct: 192 FYSAGLAYCHSKLANILFTKELAKRLKGSGVTTYSVHPGTVHSELTRYSSIMRWLWQLFF 251

Query: 932 RFLKTAREG 958
            F+KT +EG
Sbjct: 252 VFIKTPQEG 260



 Score = 79.3 bits (194), Expect(2) = e-111
 Identities = 36/53 (67%), Positives = 43/53 (81%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTSL+CAL EGLE LSG +FSDC+ AWVS + RN   A RLW+VSC+LLG+
Sbjct: 260  GAQTSLYCALTEGLESLSGSHFSDCQLAWVSYQGRNEIIARRLWDVSCDLLGL 312


>ref|NP_780581.1| retinol dehydrogenase 13 [Mus musculus].
          Length = 334

 Score =  221 bits (562), Expect(2) = 4e-65
 Identities = 113/221 (51%), Positives = 149/221 (67%), Gaps = 1/221 (0%)
 Frame = +2

Query: 239 IRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAAS 418
           ++ + AGG C +   +PGK V++TGANTGIGK+TA ELA+RG  V +ACRD+ K E AA 
Sbjct: 21  LKDYVAGGACPSKATIPGKTVIVTGANTGIGKQTALELAKRGGNVILACRDMEKCEVAAK 80

Query: 419 EIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFE 598
           +IR +T N +V   +LDL+  KSIR FA   + EE+++ IL+NNA VM CP+  T DGFE
Sbjct: 81  DIRGETLNPRVRAERLDLASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTEDGFE 140

Query: 599 THLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGE-KHYNRGFAY 775
              GVN               KASAP+R++NLSS+ H AG I F DL  + K Y+   AY
Sbjct: 141 MQFGVNYLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQMKKYDTKAAY 200

Query: 776 CHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHS 898
           C SKLA VLFT+EL+ RLQG+GVT  A+HPG+ ++EL RH+
Sbjct: 201 CQSKLAVVLFTKELSHRLQGSGVTVNALHPGVARTELGRHT 241



 Score = 47.0 bits (110), Expect(2) = 4e-65
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +1

Query: 958  AQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            AQ S + A+AE LE +SGKYF   +    SP A + + A RLW  S  L+G+
Sbjct: 268  AQPSTYLAVAEELENVSGKYFDGLREKAPSPEAEDEEVARRLWTESARLVGL 319


>ref|NP_076186.1| retinol dehydrogenase 14 [Mus musculus].
          Length = 334

 Score =  204 bits (520), Expect(2) = 9e-62
 Identities = 111/237 (46%), Positives = 148/237 (62%), Gaps = 14/237 (5%)
 Frame = +2

Query: 290 GKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRA----------DTK 439
           GK V+ITGAN+G+G+ TA EL R GARV + CRD  + E AA ++R           D  
Sbjct: 44  GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGT 103

Query: 440 NSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNX 619
           + Q++V++LDL+  +S+RAF +  L EE +L +LINNAGV  CPY+KT DGFE   GVN 
Sbjct: 104 DGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVNH 163

Query: 620 XXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANV 799
                         K+SAP+R+V +SS ++  G+I F DL  E+ YN+ F Y  SKLAN+
Sbjct: 164 LGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGEINFEDLNSEQSYNKSFCYSRSKLANI 223

Query: 800 LFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS----RFLKTAREG 958
           LFTRELA+RL+GT VT   +HPGIV++ L RH  +  L   LF+     F KT  EG
Sbjct: 224 LFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVSWAFFKTPLEG 280



 Score = 52.0 bits (123), Expect(2) = 9e-62
 Identities = 22/53 (41%), Positives = 36/53 (67%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTS++ A +  +E +SG+YF DCK   + P+A +   A +LW++S  ++GI
Sbjct: 280  GAQTSIYLACSPDVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGI 332


>ref|NP_899109.2| dehydrogenase/reductase SDR family member 13 precursor [Mus
           musculus].
          Length = 376

 Score =  167 bits (422), Expect(2) = 1e-55
 Identities = 105/233 (45%), Positives = 141/233 (60%), Gaps = 5/233 (2%)
 Frame = +2

Query: 212 FFLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRD 391
           ++  V APS      GG+      L G+ VV+TGAN+GIGK TA ELARRGARV +ACR 
Sbjct: 19  YYNLVKAPS-----CGGIG----SLRGRTVVVTGANSGIGKMTALELARRGARVVLACRS 69

Query: 392 VLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCP 571
             +GE+AA ++R ++ N++V+   LDL+   S++AFA  FL+ E +L +LI+NAG+  C 
Sbjct: 70  RERGEAAAFDLRQESGNNEVIFMALDLASLASVQAFATAFLSSEPRLDVLIHNAGISSC- 128

Query: 572 YSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQ--- 742
             +T + F   L VN               ++ AP+RVV +SS  H  G++ F  L    
Sbjct: 129 -GRTRETFNLLLRVNHVGPFLLTHLLLPRLRSCAPSRVVIVSSAAHRRGRLDFTRLDCPV 187

Query: 743 -GEKHYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSEL-VRH 895
            G +   R  AY  SKLANVLF RELA +L+GTGVT YA HPG V SEL +RH
Sbjct: 188 VGWQQELR--AYADSKLANVLFARELATQLEGTGVTCYAAHPGPVNSELFLRH 238



 Score = 69.3 bits (168), Expect(2) = 1e-55
 Identities = 42/114 (36%), Positives = 58/114 (50%)
 Frame = +1

Query: 952  GGAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQWE*SC 1131
            GGAQT L+CAL EG+EPLSG+YF++C    VSP AR+++ A+RLW  + +L G+      
Sbjct: 260  GGAQTPLYCALQEGIEPLSGRYFANCHVEEVSPAARDDQAAQRLWKATKKLAGL------ 313

Query: 1132 WKMRGCIKPGPGHNADRGDGPPRRTDLAGCCPKHFPALILLILGKPPHT*PSYQ 1293
                      PG + D  D  P   D      +  P+     +  P H   SYQ
Sbjct: 314  ---------APGDDDDDPDEEPEPEDPRAPSSQSAPSPEKTTVSGPSH---SYQ 355


>ref|NP_062519.2| WW domain-containing oxidoreductase [Mus musculus].
          Length = 414

 Score =  141 bits (355), Expect(2) = 2e-41
 Identities = 92/257 (35%), Positives = 135/257 (52%), Gaps = 13/257 (5%)
 Frame = +2

Query: 227 TAPSIRKFFAGGVCRTNM----QLPGKVVVITGANTGIGKETARELARRGARVYIACRDV 394
           T P+ R+ + G      +       GKVV++TGAN+GIG ETA+  A  GA V +ACR++
Sbjct: 99  TKPTTRQRYDGSTTAMEILQGRDFTGKVVLVTGANSGIGFETAKSFALHGAHVILACRNL 158

Query: 395 LKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPY 574
            +   A S I  +   ++V    LDL+  +S++ FAE F  +   LH+L+ NAG    P+
Sbjct: 159 SRASEAVSRILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPW 218

Query: 575 SKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHH-------AGKIRFH 733
             T DG ET   VN                 S+PARV+ +SS  H        +GK+   
Sbjct: 219 GLTKDGLETTFQVNHLGHFYLVQLLQDVLCRSSPARVIVVSSESHRFTDINDSSGKLDLS 278

Query: 734 DLQGEK-HYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPG-IVQSELVRHSFLL 907
            L   +  Y    AY  SKL N+LF+ EL +RL   GVT+ AVHPG ++ S + R+S++ 
Sbjct: 279 RLSPPRSDYWAMLAYNRSKLCNILFSNELHRRLSPRGVTSNAVHPGNMMYSAIHRNSWVY 338

Query: 908 CLLWRLFSRFLKTAREG 958
            LL+ L   F K+ ++G
Sbjct: 339 KLLFTLARPFTKSMQQG 355



 Score = 47.4 bits (111), Expect(2) = 2e-41
 Identities = 22/51 (43%), Positives = 33/51 (64%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELL 1107
            GA T+++CA+A  LE L G YF++C R   S  A++ +TA  LW +S  L+
Sbjct: 355  GAATTVYCAVAPELEGLGGMYFNNCCRCLPSEEAQSEETARALWELSERLI 405


>ref|NP_001028498.2| dehydrogenase/reductase SDR family member on chromosome X homolog
           precursor [Mus musculus].
          Length = 335

 Score =  144 bits (362), Expect(2) = 3e-37
 Identities = 85/210 (40%), Positives = 113/210 (53%), Gaps = 6/210 (2%)
 Frame = +2

Query: 287 PGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKL 466
           PG+V ++TGA  GIG+ TAR+LAR G  V +A  D   G+   S IRA+  + +     L
Sbjct: 42  PGRVAIVTGATAGIGRSTARQLARLGMCVVVAGNDEHCGQEVVSSIRAEMGSDRAHFLPL 101

Query: 467 DLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXXXXX 646
           DL+   S+R FA  F      LH+L+NNAGVML P ++T DGFE HLGVN          
Sbjct: 102 DLASLASVRGFARDFRALGLPLHLLVNNAGVMLEPRAETEDGFERHLGVNFLGHFLLTLL 161

Query: 647 XXXXXKASAP----ARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVLFTRE 814
                +AS      +RVV + S  H+ G +   DL G   Y+   AY  SKLA  LF  +
Sbjct: 162 LLPALRASGAEGRGSRVVTVGSATHYVGTVDMADLHGRHAYSPYAAYAQSKLALALFALQ 221

Query: 815 LAKRLQGTG--VTTYAVHPGIVQSELVRHS 898
           L + L   G  VT+    PG+V +EL RH+
Sbjct: 222 LQRILDARGDPVTSNMADPGVVDTELYRHA 251



 Score = 30.8 bits (68), Expect(2) = 3e-37
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLG 1110
            GA T ++ A A  LE + G+Y  D   A     AR+ +   RLW     L G
Sbjct: 273  GAWTLVYAAAAPELEGVGGRYLRDEAEAEPLGTARDQELQRRLWAEGLRLTG 324


>ref|NP_079798.2| dehydrogenase/reductase SDR family member 7 precursor [Mus
           musculus].
          Length = 338

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
 Frame = +2

Query: 269 RTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEI--RADTKN 442
           R   +L   VV +TGA++GIG+E A +L++ G  + ++ R   + E          + K 
Sbjct: 43  RPEWELTDMVVWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKE 102

Query: 443 SQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXX 622
             +LV  LDL+DT S  A  +  L E  ++ IL+NN G      S+ +   ET+L V   
Sbjct: 103 KDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGG-----RSQRSLVLETNLDVFKE 157

Query: 623 XXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVL 802
                        K   P  +      +     +  + + G    +    YC SK A   
Sbjct: 158 LINLNYIGTVSLTKCVLPHMIERKQGKI-----VTVNSIAGIASVSLSSGYCASKHALRG 212

Query: 803 FTRELAKRL-QGTGVTTYAVHPGIVQSELVRHSF 901
           F   L   L Q  G+T   V+PG VQS++V+++F
Sbjct: 213 FFNALHSELGQYPGITFCNVYPGPVQSDIVKNAF 246


>ref|NP_780721.1| dehydrogenase/reductase SDR family member 9 precursor [Mus
           musculus].
          Length = 319

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
 Frame = +2

Query: 293 KVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDL 472
           K V ITG +TG G   AR   ++G RV  AC  + +  SAA + +   +   VL   LD+
Sbjct: 30  KYVFITGCDTGFGNLAARTFDKKGFRVIAAC--LTESGSAALKAKTSERLHTVL---LDV 84

Query: 473 SDTKSIRAFAEGFLTE--EKQLHILINNAGVM--LCPYS-KTADGFETHLGVNXXXXXXX 637
           +D ++++  A+   +   EK L  LINNAGV+  L P    T D +   + VN       
Sbjct: 85  TDPENVKKTAQWVKSHVGEKGLWGLINNAGVLGVLAPTDWLTVDDYREPIEVNLFGLINV 144

Query: 638 XXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVLFTREL 817
                   K  A  RV+N+SS+    G++ F           G  Y  SK A   F   L
Sbjct: 145 TLNMLPLVK-KARGRVINVSSI---GGRLAF----------GGGGYTPSKYAVEGFNDSL 190

Query: 818 AKRLQGTGVTTYAVHPGIVQSEL 886
            + ++  GV    + PG+ ++EL
Sbjct: 191 RRDMKAFGVHVSCIEPGLFKTEL 213


>ref|NP_766635.1| carbonyl reductase 3 [Mus musculus].
          Length = 277

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 34/234 (14%)
 Frame = +2

Query: 293 KVVVITGANTGIGKETARELARR-GARVYIACRDVLKGESAASEIRADTKNSQVLVRKLD 469
           +V ++TGAN GIG    R+L R+    V +  RD  +G +A  +++A+  + +    +LD
Sbjct: 6   RVALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVQQLQAEGLSPRF--HQLD 63

Query: 470 LSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXXXXXX 649
           + D +SIRA  +    E   L++L+NNAG+       T    +  + +            
Sbjct: 64  IDDPQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFDIQAEVTLKTNFFATRNVCT 123

Query: 650 XXXXKASAPARVVNLSSV--------------------------VHHAGKIRFHDLQGEK 751
                     RVVN+SS+                          +    K    D + E 
Sbjct: 124 ELLPIMKPHGRVVNISSLQGLKALENCREDLQEKFRCDTLTEVDLVDLMKKFVEDTKNEV 183

Query: 752 HYNRGF---AYCHSKLANVLFTRELAKRL----QGTGVTTYAVHPGIVQSELVR 892
           H   G+   AY  SKL   + TR LA++L    +   +   A  PG V++++ R
Sbjct: 184 HEREGWPDSAYGVSKLGVTVLTRILARQLDEKRKADRILLNACCPGWVKTDMAR 237


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 46,130,164
Number of extensions: 1268260
Number of successful extensions: 4583
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 4544
Number of HSP's successfully gapped: 36
Length of query: 454
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 349
Effective length of database: 12,463,779
Effective search space: 4349858871
Effective search space used: 4349858871
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRT1_0146_C03
         (1362 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001230331.1| retinol dehydrogenase 12 [Sus scrofa].            461   e-162
Alignment   gi|XP_001928802.1| PREDICTED: retinol dehydrogenase 11 [Sus scr...   345   e-113
Alignment   gi|XP_003125388.1| PREDICTED: retinol dehydrogenase 14-like [Su...   204   5e-62
Alignment   gi|XP_003125042.1| PREDICTED: retinol dehydrogenase 12-like [Su...   106   3e-23
Alignment   gi|XP_003126896.2| PREDICTED: WW domain-containing oxidoreducta...    80   2e-15
Alignment   gi|XP_003355526.1| PREDICTED: short-chain dehydrogenase/reducta...    65   7e-11
Alignment   gi|XP_003132810.1| PREDICTED: carbonyl reductase [NADPH] 3-like...    60   3e-09
Alignment   gi|XP_003358992.1| PREDICTED: carbonyl reductase [NADPH] 1-like...    60   3e-09
Alignment   gi|XP_003133511.1| PREDICTED: dehydrogenase/reductase SDR famil...    58   1e-08
Alignment   gi|XP_003133510.1| PREDICTED: dehydrogenase/reductase SDR famil...    58   1e-08

>ref|NP_001230331.1| retinol dehydrogenase 12 [Sus scrofa].
          Length = 316

 Score =  461 bits (1185), Expect(3) = e-162
 Identities = 234/249 (93%), Positives = 234/249 (93%)
 Frame = +2

Query: 212 FFLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRD 391
           FFLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRD
Sbjct: 13  FFLYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRD 72

Query: 392 VLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCP 571
           VLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCP
Sbjct: 73  VLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCP 132

Query: 572 YSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEK 751
           YSKTADGFETHLGVN               KASAPARVVNLSSVVHHAGKIRFHDLQGEK
Sbjct: 133 YSKTADGFETHLGVNHLGHFLLTHLLLEQLKASAPARVVNLSSVVHHAGKIRFHDLQGEK 192

Query: 752 HYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS 931
           HYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS
Sbjct: 193 HYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFS 252

Query: 932 RFLKTAREG 958
           RFLKTAREG
Sbjct: 253 RFLKTAREG 261



 Score =  122 bits (307), Expect(3) = e-162
 Identities = 56/56 (100%), Positives = 56/56 (100%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQWE 1122
            GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQWE
Sbjct: 261  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGIQWE 316



 Score = 30.0 bits (66), Expect(3) = e-162
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 175 MLAVLGLLTSFLFF 216
           MLAVLGLLTSFLFF
Sbjct: 1   MLAVLGLLTSFLFF 14


>ref|XP_001928802.1| PREDICTED: retinol dehydrogenase 11 [Sus scrofa].
          Length = 316

 Score =  345 bits (884), Expect(2) = e-113
 Identities = 170/247 (68%), Positives = 199/247 (80%)
 Frame = +2

Query: 218 LYVTAPSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVL 397
           LY+  P IRK  + GVC + +QLPGKV V+TGANTGIGKETA+ELA+RGARVY+ACRDV 
Sbjct: 15  LYIAVPQIRKMLSSGVCTSTVQLPGKVAVVTGANTGIGKETAKELAKRGARVYLACRDVQ 74

Query: 398 KGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYS 577
           KGES A EI+  T N QVLVRKLDL+DTKSIRAFA+GFL EEK LHILINNAGVM+CPYS
Sbjct: 75  KGESVAREIQNMTGNQQVLVRKLDLADTKSIRAFAKGFLAEEKHLHILINNAGVMMCPYS 134

Query: 578 KTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHY 757
           KTADGFETH+GVN               K SAP+RVVN+SS+ HH G+I FH+LQGEK Y
Sbjct: 135 KTADGFETHMGVNHLGHFLLTHLLLEKLKESAPSRVVNVSSLAHHMGRIHFHNLQGEKFY 194

Query: 758 NRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFSRF 937
           + G AYC+SKLANVLFT+ELA+RL+G+GVTTY+VHPG V SELVRHS LL  +W LFS F
Sbjct: 195 HAGLAYCNSKLANVLFTQELARRLKGSGVTTYSVHPGTVDSELVRHSSLLRWIWWLFSFF 254

Query: 938 LKTAREG 958
           +KT ++G
Sbjct: 255 IKTPQQG 261



 Score = 82.0 bits (201), Expect(2) = e-113
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +1

Query: 955  GAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            GAQTSL+CAL EGLE LSG +FSDC  AWVS +ARN   A RLW+VSC+LLGI
Sbjct: 261  GAQTSLYCALTEGLEVLSGNHFSDCHVAWVSAQARNETVARRLWDVSCDLLGI 313


>ref|XP_003125388.1| PREDICTED: retinol dehydrogenase 14-like [Sus scrofa].
          Length = 336

 Score =  204 bits (518), Expect(2) = 5e-62
 Identities = 112/259 (43%), Positives = 156/259 (60%), Gaps = 17/259 (6%)
 Frame = +2

Query: 233 PSIRKFFAGGVCRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESA 412
           PS+++   GG    +  + GK V+ITGAN+G+G+ TA EL R GARV + CRD  + E A
Sbjct: 27  PSVQRLHRGG---DSGLMHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEA 83

Query: 413 ASEIRADTKNSQ-------------VLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNA 553
           A ++R + + ++             ++VR+LDL+  +S+RAF +  L EE +L +LINNA
Sbjct: 84  AGQLRRELRQTEGPEEGPNSGGAGELVVRELDLASLRSVRAFCQEMLQEEPRLDVLINNA 143

Query: 554 GVMLCPYSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFH 733
           G+  CPY KT DGFE    VN               K+SAP+R+V +SS ++  G I F 
Sbjct: 144 GIFQCPYMKTEDGFEMQFAVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFE 203

Query: 734 DLQGEKHYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCL 913
           DL  E+ YN+ F Y  SKLAN+LFTRELA+RL+GT VT   +HPGIV++ L RH  +  L
Sbjct: 204 DLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLL 263

Query: 914 LWRLFS----RFLKTAREG 958
           +  LF+     F KT  EG
Sbjct: 264 VRPLFNLVSWAFFKTPAEG 282



 Score = 53.1 bits (126), Expect(2) = 5e-62
 Identities = 24/55 (43%), Positives = 38/55 (69%)
 Frame = +1

Query: 949  AGGAQTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELLGI 1113
            A GAQTS++ A +  +E +SGKYF DCK   + P+A ++  A +LW++S  ++GI
Sbjct: 280  AEGAQTSVYLASSPEVEGVSGKYFGDCKEEELLPKAMDDSVARKLWDISEVMVGI 334


>ref|XP_003125042.1| PREDICTED: retinol dehydrogenase 12-like [Sus scrofa].
          Length = 181

 Score =  106 bits (264), Expect = 3e-23
 Identities = 53/117 (45%), Positives = 80/117 (68%)
 Frame = +2

Query: 266 CRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNS 445
           C T+  L GK  V+TGAN+GIGK  ++ELARRGARV +ACR   +G+ A +EI+A T+++
Sbjct: 43  CSTD--LTGKTAVVTGANSGIGKAVSQELARRGARVILACRSRERGQGALTEIQAATRSN 100

Query: 446 QVLVRKLDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVN 616
           ++L+  +DLS   SIR+F +  L E  ++H+L+NNAGV   P ++T +G +     N
Sbjct: 101 RLLLGGVDLSSMASIRSFVQWLLRESPEIHLLVNNAGVSGFPRTRTPEGLDLTFATN 157


>ref|XP_003126896.2| PREDICTED: WW domain-containing oxidoreductase-like, partial [Sus
           scrofa].
          Length = 163

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 59/155 (38%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
 Frame = +2

Query: 530 LHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXXXXXXXXXXKASAPARVVNLSSVVH 709
           LH+L+ NA V   P+S T DG ET   VN                 SAPARVV +SS  H
Sbjct: 2   LHVLVCNAAVFALPWSLTKDGLETTFQVNHLGHFYLVQLLQDVLCRSAPARVVVVSSESH 61

Query: 710 H-------AGKIRFHDLQ-GEKHYNRGFAYCHSKLANVLFTRELAKRLQGTGVTTYAVHP 865
                   +GK+ F  L      Y    AY  SKL N+LF+ EL +RL   GVT+ AVHP
Sbjct: 62  RFTDINDSSGKLDFSRLSPSHSDYWAMLAYNRSKLCNILFSNELHRRLSPRGVTSNAVHP 121

Query: 866 G-IVQSELVRHSFLLCLLWRLFSRFLKTAREGPRP 967
           G ++ S L R  ++  LL+ L   F K+      P
Sbjct: 122 GNMMFSSLHRGWWVYTLLFTLARPFTKSMTHSSEP 156


>ref|XP_003355526.1| PREDICTED: short-chain dehydrogenase/reductase family 9C member
           7-like [Sus scrofa].
          Length = 313

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 65/235 (27%), Positives = 101/235 (42%), Gaps = 5/235 (2%)
 Frame = +2

Query: 266 CRTNMQLPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNS 445
           C     L  K V ITG ++G G   AR+L  RG RV  AC      E  A +++ DT + 
Sbjct: 17  CNVVRNLSDKYVFITGCDSGFGNLLARQLVDRGMRVLAACFT----EEGAQKLQQDT-SY 71

Query: 446 QVLVRKLDLSDTKSIRAFAEGFLTE--EKQLHILINNAGVMLCPYSK---TADGFETHLG 610
           ++    LD++ T+SI+A A+    +  E+ L  L+NNAGV L        T + F   + 
Sbjct: 72  RLQTTLLDVTKTESIKAAAQWVRDQVSEQGLWALVNNAGVGLPSGPNEWLTKEDFVKVIN 131

Query: 611 VNXXXXXXXXXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKL 790
           VN               K  A  RVVN+SS              G +    G  YC SK 
Sbjct: 132 VNLVGLIEVTLHMLPMVK-KARGRVVNMSS-------------SGGRVAVIGGGYCVSKF 177

Query: 791 ANVLFTRELAKRLQGTGVTTYAVHPGIVQSELVRHSFLLCLLWRLFSRFLKTARE 955
               F+  + + L   GV    + PG  ++ ++    L   + ++++R  +  R+
Sbjct: 178 GVEAFSDSIRRELHYFGVKVSIIEPGNYRTSILGKESLEMRMRKMWARLPQETRD 232


>ref|XP_003132810.1| PREDICTED: carbonyl reductase [NADPH] 3-like [Sus scrofa].
          Length = 277

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 34/232 (14%)
 Frame = +2

Query: 293 KVVVITGANTGIGKETARELARR-GARVYIACRDVLKGESAASEIRADTKNSQVLVRKLD 469
           +V ++TGAN GIG   AR+L R+    V +  RD  +G +A  +++A+  + +    +LD
Sbjct: 6   RVALVTGANKGIGFAIARDLCRQFSGDVVLTSRDAARGRAAVQQLQAEGLSPRF--HQLD 63

Query: 470 LSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNXXXXXXXXXXX 649
           + D +SIRA  +    E   L++L+NNAG+       T    +  + +            
Sbjct: 64  IDDLQSIRALRDFLRKEYGGLNVLVNNAGIAFKIDDPTPFDIQAEMTLKTNFFGTRNVCI 123

Query: 650 XXXXKASAPARVVNLSSVVHHAG--------------------------KIRFHDLQGEK 751
                     RVVN+SS++                              K    D + E 
Sbjct: 124 ELLPIIKPHGRVVNISSLLGSKALENCSEDLQEKFRCEALTEEDLVDLMKKFVEDAKNEV 183

Query: 752 HYNRGF---AYCHSKLANVLFTRELAKRL----QGTGVTTYAVHPGIVQSEL 886
           H   G+   AY  SKL   + +R LA+RL    +   +   A  PG V++++
Sbjct: 184 HEREGWPSSAYGVSKLGVTVLSRILAQRLDEKRKADRILLNACCPGWVKTDM 235


>ref|XP_003358992.1| PREDICTED: carbonyl reductase [NADPH] 1-like [Sus scrofa].
          Length = 281

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
 Frame = +2

Query: 293 KVVVITGANTGIGKETARELARR-GARVYIACRDVLKGESAASEIRADTKNSQVLVRKLD 469
           +V V+TG N GIG    R+L ++    V +  RDV +G++A  +++A+  + +    +LD
Sbjct: 6   RVAVVTGGNKGIGLAIVRDLCQQFSGDVMLTARDVARGQAAVQQLQAEGLSPRF--HQLD 63

Query: 470 LSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHL 607
           + D +SI+A  +  L E   L++L+NNAG+      KT D    H+
Sbjct: 64  IDDLRSIQALRDFLLKEYGGLNVLVNNAGIAF----KTVDPTPFHI 105


>ref|XP_003133511.1| PREDICTED: dehydrogenase/reductase SDR family member 9-like isoform
           1 [Sus scrofa].
          Length = 319

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
 Frame = +2

Query: 293 KVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDL 472
           K + ITG +TG G   AR   ++G  V  AC      ES ++ ++A+T + ++    LD+
Sbjct: 30  KYIFITGCDTGFGNLAARTFDKKGFHVIAACLT----ESGSTALKAET-SERLHTVLLDV 84

Query: 473 SDTKSIRAFAEGFLTE--EKQLHILINNAGVM--LCPYS-KTADGFETHLGVNXXXXXXX 637
           +D ++++  A+    +  EK L  LINNAG++  L P    T + +   + VN       
Sbjct: 85  TDPENVKRTAQWVKNQVGEKGLWGLINNAGILGVLAPTDWLTVEDYREPIEVNLFGLINV 144

Query: 638 XXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVLFTREL 817
                   K  A  RV+N+SS+    G++ F           G  Y  SK A   F   L
Sbjct: 145 TLNMLPLVK-KARGRVINVSSI---GGRLAF----------GGGGYAPSKYAVEGFNDSL 190

Query: 818 AKRLQGTGVTTYAVHPGIVQSEL 886
            + ++  GV    + PG+ ++ L
Sbjct: 191 RRDMKAFGVHVACIEPGLFKTGL 213


>ref|XP_003133510.1| PREDICTED: dehydrogenase/reductase SDR family member 9-like,
           partial [Sus scrofa].
          Length = 245

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
 Frame = +2

Query: 293 KVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDL 472
           K + ITG +TG G   AR   ++G  V  AC      ES ++ ++A+T + ++    LD+
Sbjct: 30  KYIFITGCDTGFGNLAARTFDKKGFHVIAACLT----ESGSTALKAET-SERLHTVLLDV 84

Query: 473 SDTKSIRAFAEGFLTE--EKQLHILINNAGVM--LCPYS-KTADGFETHLGVNXXXXXXX 637
           +D ++++  A+    +  EK L  LINNAG++  L P    T + +   + VN       
Sbjct: 85  TDPENVKRTAQWVKNQVGEKGLWGLINNAGILGVLAPTDWLTVEDYREPIEVNLFGLINV 144

Query: 638 XXXXXXXXKASAPARVVNLSSVVHHAGKIRFHDLQGEKHYNRGFAYCHSKLANVLFTREL 817
                   K  A  RV+N+SS+    G++ F           G  Y  SK A   F   L
Sbjct: 145 TLNMLPLVK-KARGRVINVSSI---GGRLAF----------GGGGYAPSKYAVEGFNDSL 190

Query: 818 AKRLQGTGVTTYAVHPGIVQSEL 886
            + ++  GV    + PG+ ++ L
Sbjct: 191 RRDMKAFGVHVACIEPGLFKTGL 213


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 34,807,355
Number of extensions: 1009195
Number of successful extensions: 3688
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 3663
Number of HSP's successfully gapped: 28
Length of query: 454
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 352
Effective length of database: 8,804,438
Effective search space: 3099162176
Effective search space used: 3099162176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= OVRT1_0146_C03
         (1362 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr07                                                         634   e-179
Sscrofa_ChrX                                                          254   1e-64

>Sscrofa_Chr07 
||          Length = 134764511

 Score =  634 bits (320), Expect = e-179
 Identities = 320/320 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1020     cagtgactgcaagagggcctgggtgtcgccaagggcccggaataacaaaacggccgagcg 1079
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97800133 cagtgactgcaagagggcctgggtgtcgccaagggcccggaataacaaaacggccgagcg 97800192

                                                                            
Query: 1080     cttgtggaacgtcagctgcgagctcctgggaatccagtgggagtagagctgctggaagat 1139
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97800193 cttgtggaacgtcagctgcgagctcctgggaatccagtgggagtagagctgctggaagat 97800252

                                                                            
Query: 1140     gcgcggctgtatcaagcctggtccaggccataacgcagaccggggagatggcccaccccg 1199
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97800253 gcgcggctgtatcaagcctggtccaggccataacgcagaccggggagatggcccaccccg 97800312

                                                                            
Query: 1200     aaggactgacctggctggctgctgtcccaaacacttccctgctttgattctcctgatcct 1259
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97800313 aaggactgacctggctggctgctgtcccaaacacttccctgctttgattctcctgatcct 97800372

                                                                            
Query: 1260     tggaaaacctccccacacctaaccctcttaccaggctgattctcggcataagaggttcat 1319
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97800373 tggaaaacctccccacacctaaccctcttaccaggctgattctcggcataagaggttcat 97800432

                                    
Query: 1320     acctggagagcatcgtcctt 1339
                ||||||||||||||||||||
Sbjct: 97800433 acctggagagcatcgtcctt 97800452



 Score =  426 bits (215), Expect = e-116
 Identities = 236/244 (96%), Gaps = 1/244 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        taggattctgggctacgctgagagccaggctgttgctgagcacccaggatcgagaagagg 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97788540 taggattctgggctacgctgagagccaggctgttgctgagcacccaggatcgagaagagg 97788599

                                                                            
Query: 61       cagaggaaagggaagcagagagaagcagccaagagttggagccagaccaggaggagcccg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97788600 cagaggaaagggaagcagagagaagcagccaagagttggagccagaccaggaggagcccg 97788659

                                                                            
Query: 121      agtggagttgaagttccttttgcagaggcggcagcaagtaaagcagttgaaacgatgctg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97788660 agtggagttgaagttccttttgcagaggcggcagcaagtaaagcagttgaaacgatgctg 97788719

                                                                            
Query: 181      gctgtcttgggactgctcacctccttccnnnnnnnncctgtatgtgacagctccatccat 240
                ||||||||||||||||||||||||||||        ||||||||||||||||||||||||
Sbjct: 97788720 gctgtcttgggactgctcacctccttcc-tttttttcctgtatgtgacagctccatccat 97788778

                    
Query: 241      cagg 244
                ||||
Sbjct: 97788779 cagg 97788782



 Score =  420 bits (212), Expect = e-115
 Identities = 212/212 (100%)
 Strand = Plus / Plus

                                                                            
Query: 623      ggccacttccttctcacgcacttgctcttggagcagctgaaggcatctgctcccgcacgg 682
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97793310 ggccacttccttctcacgcacttgctcttggagcagctgaaggcatctgctcccgcacgg 97793369

                                                                            
Query: 683      gtggtgaacctgtcatccgtggtccaccatgctggcaagattcgcttccacgacctccag 742
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97793370 gtggtgaacctgtcatccgtggtccaccatgctggcaagattcgcttccacgacctccag 97793429

                                                                            
Query: 743      ggtgagaagcactacaaccggggttttgcttattgccacagcaagctggccaacgtgctc 802
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97793430 ggtgagaagcactacaaccggggttttgcttattgccacagcaagctggccaacgtgctc 97793489

                                                
Query: 803      tttactcgggaactggccaagaggctccaagg 834
                ||||||||||||||||||||||||||||||||
Sbjct: 97793490 tttactcgggaactggccaagaggctccaagg 97793521



 Score =  365 bits (184), Expect = 4e-98
 Identities = 191/192 (99%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                            
Query: 832      aggcacgggggtcaccacgtacgcagtgcacccaggcatcgtccagtctgagctggtccg 891
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97795667 aggcacgggggtcaccacgtacgcagtgcacccaggcatcgtccagtctgagctggtccg 97795726

                                                                            
Query: 892      gcattccttcctgctgtgcctgctctggcggctcttctcccgcttcctcaaaacagcgcg 951
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97795727 gcattccttcctgctgtgcctgctctggcggctcttctcccgcttcctcaaaacagcgcg 97795786

                                                                            
Query: 952      gga-ggggcccagaccagcctgcactgcgccctggccgagggcctggagcccctgagcgg 1010
                ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97795787 ggagggggcccagaccagcctgcactgcgccctggccgagggcctggagcccctgagcgg 97795846

                            
Query: 1011     caagtacttcag 1022
                ||||||||||||
Sbjct: 97795847 caagtacttcag 97795858



 Score =  305 bits (154), Expect = 3e-80
 Identities = 157/158 (99%)
 Strand = Plus / Plus

                                                                            
Query: 361      aggagcccgagtatacattgcctgccgagatgtactgaagggggagtctgctgccagtga 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97791039 aggagcccgagtatacattgcctgccgagatgtactgaagggggagtctgctgccagtga 97791098

                                                                            
Query: 421      gatccgagctgatacaaagaactcccaggtgctggtgcggaaactggacctctctgatac 480
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97791099 aatccgagctgatacaaagaactcccaggtgctggtgcggaaactggacctctctgatac 97791158

                                                      
Query: 481      caaatccatccgagcctttgctgagggctttctgacag 518
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 97791159 caaatccatccgagcctttgctgagggctttctgacag 97791196



 Score =  242 bits (122), Expect = 4e-61
 Identities = 122/122 (100%)
 Strand = Plus / Plus

                                                                            
Query: 242      aggaagttctttgctggtggggtttgtaggacaaacatgcagcttcccgggaaggtggtg 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97790188 aggaagttctttgctggtggggtttgtaggacaaacatgcagcttcccgggaaggtggtg 97790247

                                                                            
Query: 302      gtgatcacgggtgccaacacgggcattggcaaggagacagccagagagctcgctcgcaga 361
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97790248 gtgatcacgggtgccaacacgggcattggcaaggagacagccagagagctcgctcgcaga 97790307

                  
Query: 362      gg 363
                ||
Sbjct: 97790308 gg 97790309



 Score =  214 bits (108), Expect = 1e-52
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                            
Query: 517      agaggaaaagcagctccatattctgatcaacaatgctggagtgatgttgtgtccatattc 576
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97791851 agaggaaaagcagctccatattctgatcaacaatgctggagtgatgttgtgtccatattc 97791910

                                                                
Query: 577      caagacagcggatggctttgagacccacctgggagtcaaccacctggg 624
                ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97791911 caagacagcggatggctttgagacccacctgggagtcaaccacctggg 97791958



 Score =  111 bits (56), Expect = 1e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                            
Query: 516      cagaggaaaagcagctccatattctgatcaacaatgctggagtgatgttgtgtccatatt 575
                |||| |||||||| ||||| ||| ||||||||||||| ||||||||| ||||||| || |
Sbjct: 97744136 cagaagaaaagcatctccacattttgatcaacaatgcaggagtgatgatgtgtccttact 97744077

                                                            
Query: 576      ccaagacagcggatggctttgagacccacctgggagtcaaccac 619
                |||||||||| || ||||||||||| ||| ||||||||||||||
Sbjct: 97744076 ccaagacagcagacggctttgagacgcacatgggagtcaaccac 97744033



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 453      tggtgcggaaactggacctctctgataccaaatccatccgagcctttgctgagggctt 510
                |||||||||||||||||||  ||||||| ||||| || ||||| |||||| |||||||
Sbjct: 97745938 tggtgcggaaactggacctggctgatactaaatctattcgagcttttgctaagggctt 97745881


>Sscrofa_ChrX 
||          Length = 144288218

 Score =  254 bits (128), Expect = 1e-64
 Identities = 237/272 (87%), Gaps = 1/272 (0%)
 Strand = Plus / Plus

                                                                            
Query: 369      gagtatacattgcctgccgagatgtactgaagggggagtctgctgccagtgagatccgag 428
                |||||| ||||||||||| ||||||| ||||| || |||  ||||||  ||| ||| |||
Sbjct: 47505102 gagtattcattgcctgccaagatgtattgaagtggaagttggctgcccatgaaatctgag 47505161

                                                                            
Query: 429      ctgatacaaagaactcccaggtgctggtgcggaaactggacctctctgataccaaatcca 488
                ||||||||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||||
Sbjct: 47505162 ctgatacaaagaactcccaggtgctggtgtggaaattggacctatccaataccaaatcca 47505221

                                                                            
Query: 489      tccgagcctttgctgagggctttctgacagag-gaaaagcagctccatattctgatcaac 547
                || |||| ||||||||| |||||||| ||| |  |||||||||||| ||||||||||| |
Sbjct: 47505222 tctgagcttttgctgagagctttctggcagtgcaaaaagcagctccgtattctgatcagc 47505281

                                                                            
Query: 548      aatgctggagtgatgttgtgtccatattccaagacagcggatggctttgagacccacctg 607
                ||  | ||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||
Sbjct: 47505282 aacacaggagtgatgatgtgttcatattccaagacagccgatggctttgaaacccacctg 47505341

                                                
Query: 608      ggagtcaaccacctgggccacttccttctcac 639
                ||| |||||  |||||||||||||||||||||
Sbjct: 47505342 ggaatcaactgcctgggccacttccttctcac 47505373



 Score =  115 bits (58), Expect = 7e-23
 Identities = 225/278 (80%), Gaps = 2/278 (0%)
 Strand = Plus / Plus

                                                                            
Query: 854      gcagtgcacccaggcatcgtccagtctgagctggtccggcattccttcctgctgtgcctg 913
                |||| |||||||||||| || || ||||||||||||| ||| || ||||||||| |||||
Sbjct: 47505848 gcagagcacccaggcatagttcactctgagctggtccagcactcattcctgctgggcctg 47505907

                                                                            
Query: 914      ctctggcggctcttctcccgcttcctcaaaacagcgcgggagggg-cccagaccagcctg 972
                ||||||| ||||||  ||  |||  ||||  ||| | | |||||| | | |||||| |||
Sbjct: 47505908 ctctggcagctctttgccacctttgtcaagtcagtgtgagaggggacacggaccagactg 47505967

                                                                            
Query: 973      cactgcgccctggccgagggcctggagcccctgagcggcaagtacttcagtgactgcaag 1032
                ||||||  |||||| ||| |||||||||||||||| | ||||   |||| ||||||||||
Sbjct: 47505968 cactgcatcctggctgagagcctggagcccctgagtgccaagggtttcaatgactgcaag 47506027

                                                                            
Query: 1033     agggcctgggtgtcgccaagggcccggaataacaaaacggccgagcgcttgtggaacgtc 1092
                ||| |  |||| || ||||||||| | | | || ||| | | ||| || ||||||| |||
Sbjct: 47506028 aggactggggtatctccaagggcctgaagtcac-aaatgtctgagagcctgtggaatgtc 47506086

                                                      
Query: 1093     agctgcgagctcctgggaatccagtgggagtagagctg 1130
                ||||| ||||| || |||||||||||||||||||||||
Sbjct: 47506087 agctgtgagcttctaggaatccagtgggagtagagctg 47506124



 Score = 75.8 bits (38), Expect = 6e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                          
Query: 72       gaagcagagagaagcagccaagagttggagccagaccaggag 113
                ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 47504810 gaagcagagagaagcagccaagaattggagccagaccaggag 47504851


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 35,934,720
Number of extensions: 261
Number of successful extensions: 261
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 259
Number of HSP's successfully gapped: 14
Length of query: 1362
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1341
Effective length of database: 2,808,413,156
Effective search space: 3766082042196
Effective search space used: 3766082042196
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)