BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0024_F10
         (2888 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001095550.1| casein kinase 1, delta [Bos taurus].              795   0.0  
Alignment   gi|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].             596   e-170
Alignment   gi|NP_777136.1| casein kinase I isoform alpha [Bos taurus].          473   e-133
Alignment   gi|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos t...   449   e-126
Alignment   gi|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].     438   e-122
Alignment   gi|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].     438   e-122
Alignment   gi|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].     416   e-116
Alignment   gi|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].     416   e-116
Alignment   gi|NP_001091628.1| casein kinase I isoform beta [Bos taurus].        407   e-113
Alignment   gi|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos tauru...   376   e-104

>ref|NP_001095550.1| casein kinase 1, delta [Bos taurus].
          Length = 409

 Score =  795 bits (2054), Expect = 0.0
 Identities = 392/409 (95%), Positives = 392/409 (95%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1009 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPLTPTSHTANTSPRPV 1188
                          LRHSRNPATRGLPSTASGRLRGTQE APPTPLTPTSHTANTSPRPV
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPV 360

Query: 1189 SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK
Sbjct: 361  SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 409


>ref|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].
          Length = 466

 Score =  596 bits (1537), Expect = e-170
 Identities = 287/295 (97%), Positives = 293/295 (99%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
           SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 993
           CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF 295


>ref|NP_777136.1| casein kinase I isoform alpha [Bos taurus].
          Length = 325

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos taurus].
          Length = 325

 Score =  449 bits (1155), Expect = e-126
 Identities = 212/293 (72%), Positives = 248/293 (84%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKI SGSFGD+YL  +I  GEEVA+KLE  K +HPQL  ESK+ K++QG
Sbjct: 10  EFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
            VGIP IRW G + DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQM+ RIEY+H+
Sbjct: 70  EVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           I+ HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 ISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YLN+CR LRF++ PDY YLR LF  LF      YDY  DW MLK
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLK 302


>ref|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 333

 Score =  438 bits (1126), Expect = e-122
 Identities = 200/289 (69%), Positives = 245/289 (84%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E   G +Y+L RKIGSGSFG +YL  +I  GEEVA+KLE  K + PQL  ES++YK++QG
Sbjct: 10  EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           K+FIHRD+KPDNFLMG G   N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130 KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           +N+HLGIEQSRRDD+ESLGYVLMYFN  SLPWQG+K AT +QKYE+I E KM+TPIE LC
Sbjct: 190 LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
            G+PSEFATYLN+CR LRF++ PDY+YLRQLFR+LF    + YDY FDW
Sbjct: 250 NGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLFRTLNYQYDYAFDW 298


>ref|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 333

 Score =  438 bits (1126), Expect = e-122
 Identities = 200/289 (69%), Positives = 245/289 (84%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E   G +Y+L RKIGSGSFG +YL  +I  GEEVA+KLE  K + PQL  ES++YK++QG
Sbjct: 10  EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           K+FIHRD+KPDNFLMG G   N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130 KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           +N+HLGIEQSRRDD+ESLGYVLMYFN  SLPWQG+K AT +QKYE+I E KM+TPIE LC
Sbjct: 190 LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
            G+PSEFATYLN+CR LRF++ PDY+YLRQLFR+LF    + YDY FDW
Sbjct: 250 NGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLFRTLNYQYDYAFDW 298


>ref|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 336

 Score =  416 bits (1068), Expect = e-116
 Identities = 192/293 (65%), Positives = 241/293 (82%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           ++ VG RY+L R+IGSGSFG ++L  D+   E+VA+KLE   T+ P+L  E ++Y ++QG
Sbjct: 10  DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           +N IHRD+KP+NFLMG G++   +++IDFGLAKKYRD RT QHIPYR  K+LTGT  +AS
Sbjct: 130 QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAAT +QK E+ISE KM+TP++VLC
Sbjct: 190 ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YL  CR L F++ PDY YLRQLF  LF +  + YDY FDW +LK
Sbjct: 250 KGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRKLNYQYDYAFDWIVLK 302


>ref|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].
          Length = 336

 Score =  416 bits (1068), Expect = e-116
 Identities = 192/293 (65%), Positives = 241/293 (82%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           ++ VG RY+L R+IGSGSFG ++L  D+   E+VA+KLE   T+ P+L  E ++Y ++QG
Sbjct: 10  DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           +N IHRD+KP+NFLMG G++   +++IDFGLAKKYRD RT QHIPYR  K+LTGT  +AS
Sbjct: 130 QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAAT +QK E+ISE KM+TP++VLC
Sbjct: 190 ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YL  CR L F++ PDY YLRQLF  LF +  + YDY FDW +LK
Sbjct: 250 KGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRKLNYQYDYAFDWIVLK 302


>ref|NP_001091628.1| casein kinase I isoform beta [Bos taurus].
          Length = 336

 Score =  407 bits (1047), Expect = e-113
 Identities = 191/293 (65%), Positives = 235/293 (80%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           ++ VG RY+L R+IG GSFG +YL  D+   E+VA+KLE   T+ P+L  E ++Y  +QG
Sbjct: 10  DVLVGGRYKLVREIGFGSFGHVYLAIDLTNHEQVAVKLESENTRQPRLLHEKELYNFLQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+HS
Sbjct: 70  GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHS 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           +N IHRD+KPDNFLMG G +   ++++DFGLAKKYRD RT QHIP+R  K+  GT   AS
Sbjct: 130 RNLIHRDIKPDNFLMGTGPQWKKLFLVDFGLAKKYRDNRTGQHIPHRSGKSFIGTPFCAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           I+ HLGIEQSRRDD+ES+GYVLMYFN GSLPWQGLKAAT +QK E+ISE KM+TP++VLC
Sbjct: 190 ISAHLGIEQSRRDDMESIGYVLMYFNRGSLPWQGLKAATLKQKCEKISEMKMTTPVDVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P EFA YL +C  L F++ PDY YLRQLFR LF +  + +DY FDW +LK
Sbjct: 250 KGFPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRKLSYQHDYAFDWIVLK 302


>ref|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos taurus].
          Length = 259

 Score =  376 bits (965), Expect = e-104
 Identities = 185/202 (91%), Positives = 192/202 (95%)
 Frame = +1

Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
           MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1   MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
           GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61  GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649 SINTHLGIEQSRRDDLESLGYV 714
           SINTHLGI +  R    S GY+
Sbjct: 181 SINTHLGIGECARPG--SRGYL 200


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 108,574,986
Number of extensions: 3217192
Number of successful extensions: 21516
Number of sequences better than 1.0e-05: 182
Number of HSP's gapped: 21015
Number of HSP's successfully gapped: 182
Length of query: 962
Length of database: 17,681,374
Length adjustment: 112
Effective length of query: 850
Effective length of database: 13,975,518
Effective search space: 11879190300
Effective search space used: 11879190300
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0024_F10
         (2888 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo s...   795   0.0  
Alignment   gi|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo s...   773   0.0  
Alignment   gi|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].      686   0.0  
Alignment   gi|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].      686   0.0  
Alignment   gi|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo s...   473   e-133
Alignment   gi|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Hom...   457   e-128
Alignment   gi|NP_660204.2| casein kinase I isoform alpha-like [Homo sapien...   452   e-126
Alignment   gi|NP_071331.2| casein kinase I isoform gamma-1 [Homo sapiens].      360   3e-99
Alignment   gi|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [H...   359   7e-99
Alignment   gi|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [H...   359   7e-99

>ref|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo sapiens].
          Length = 409

 Score =  795 bits (2054), Expect = 0.0
 Identities = 392/409 (95%), Positives = 392/409 (95%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1009 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPLTPTSHTANTSPRPV 1188
                          LRHSRNPATRGLPSTASGRLRGTQE APPTPLTPTSHTANTSPRPV
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPV 360

Query: 1189 SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK
Sbjct: 361  SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 409


>ref|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo sapiens].
          Length = 415

 Score =  773 bits (1995), Expect(2) = 0.0
 Identities = 382/399 (95%), Positives = 382/399 (95%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1009 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPLTPTSHTANTSPRPV 1188
                          LRHSRNPATRGLPSTASGRLRGTQE APPTPLTPTSHTANTSPRPV
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPV 360

Query: 1189 SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQ 1305
            SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQ
Sbjct: 361  SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQ 399



 Score = 28.9 bits (63), Expect(2) = 0.0
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 1370 IAGRVAASGLQSAVHR 1417
            I GRVA+SGLQS VHR
Sbjct: 400  IPGRVASSGLQSVVHR 415


>ref|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].
          Length = 416

 Score =  686 bits (1771), Expect = 0.0
 Identities = 342/416 (82%), Positives = 359/416 (86%), Gaps = 7/416 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1009 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTPLTPTSHTA 1167
                           R    R  ATR LP        + RLR   E    TP +      
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTPASRIQPAG 360

Query: 1168 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+  SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRIPASQTSVPFDHLGK 416


>ref|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].
          Length = 416

 Score =  686 bits (1771), Expect = 0.0
 Identities = 342/416 (82%), Positives = 359/416 (86%), Gaps = 7/416 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1009 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTPLTPTSHTA 1167
                           R    R  ATR LP        + RLR   E    TP +      
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTPASRIQPAG 360

Query: 1168 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+  SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRIPASQTSVPFDHLGK 416


>ref|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo sapiens].
          Length = 337

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Homo sapiens].
          Length = 365

 Score =  457 bits (1177), Expect = e-128
 Identities = 223/321 (69%), Positives = 255/321 (79%), Gaps = 28/321 (8%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNL----------------------------VYIIDFGLA 567
           KNFIHRD+KPDNFLMG+G+  N                             +++IDFGLA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189

Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
           KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN  SLPW
Sbjct: 190 KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249

Query: 748 QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 927
           QGLKAATK+QKYE+ISEKKMSTP+EVLCKG+P+EFA YLN+CR LRF++ PDY YLRQLF
Sbjct: 250 QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLF 309

Query: 928 RNLFHRQGFSYDYVFDWNMLK 990
           R LF      YDY FDW MLK
Sbjct: 310 RILFRTLNHQYDYTFDWTMLK 330


>ref|NP_660204.2| casein kinase I isoform alpha-like [Homo sapiens].
          Length = 337

 Score =  452 bits (1162), Expect = e-126
 Identities = 212/293 (72%), Positives = 247/293 (84%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           EL VG +Y+L RKIGSGSFGD+YLG     GE+VA+KLE  K KHPQL  ESK+Y ++QG
Sbjct: 10  ELVVGGKYKLVRKIGSGSFGDVYLGITTTNGEDVAVKLESQKVKHPQLLYESKLYTILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP + W G E D NV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHMHWYGQEKDNNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNF+HRD+KPDNFLMG G+  N +++IDFGLAKKYRD RT QHIPYRE+K+L GT RYAS
Sbjct: 130 KNFLHRDIKPDNFLMGTGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKHLIGTVRYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           IN HLGIEQSRRDD+ESLGYV MYFN  SLPWQGL+A TK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVFMYFNRTSLPWQGLRAMTKKQKYEKISEKKMSTPVEVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|NP_071331.2| casein kinase I isoform gamma-1 [Homo sapiens].
          Length = 422

 Score =  360 bits (925), Expect = 3e-99
 Identities = 170/300 (56%), Positives = 232/300 (77%), Gaps = 3/300 (1%)
 Frame = +1

Query: 88  TGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIES 267
           +G + ++  L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E 
Sbjct: 29  SGSSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEY 88

Query: 268 KIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 444
           + YK +   G G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+
Sbjct: 89  RFYKQLGSAGEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQL 148

Query: 445 ISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 618
           +SR+EY+HSKN I+RDVKP+NFL+G    KK ++++IIDFGLAK+Y D  T +HIPYRE+
Sbjct: 149 LSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREH 208

Query: 619 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE 798
           K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I +
Sbjct: 209 KSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 268

Query: 799 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
            K +TPIE LC+ +P E ATYL + R L F +KPDY YLR LF +LF ++G+++DY +DW
Sbjct: 269 TKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFDYAYDW 328


>ref|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [Homo sapiens].
          Length = 455

 Score =  359 bits (922), Expect = 7e-99
 Identities = 178/317 (56%), Positives = 235/317 (74%), Gaps = 2/317 (0%)
 Frame = +1

Query: 34  KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
           K D     PS  +    R   + ++  L VG  +R+G+KIG G+FG++ LG ++   E V
Sbjct: 10  KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69

Query: 214 AIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
           AIKLE +K++ PQLH+E + YK +  G GIP + + G  G YN MV+ELLGPSLEDLF+ 
Sbjct: 70  AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129

Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 567
           C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G    K   +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 189

Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
           K+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  GSLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249

Query: 748 QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 927
           QGLKA T +++Y++I + K +TPIEVLC+ +P E ATYL + R L F +KPDY YLR+LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 308

Query: 928 RNLFHRQGFSYDYVFDW 978
            +LF R+G+ +DY +DW
Sbjct: 309 TDLFDRKGYMFDYEYDW 325


>ref|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [Homo sapiens].
          Length = 415

 Score =  359 bits (922), Expect = 7e-99
 Identities = 178/317 (56%), Positives = 235/317 (74%), Gaps = 2/317 (0%)
 Frame = +1

Query: 34  KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
           K D     PS  +    R   + ++  L VG  +R+G+KIG G+FG++ LG ++   E V
Sbjct: 10  KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69

Query: 214 AIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
           AIKLE +K++ PQLH+E + YK +  G GIP + + G  G YN MV+ELLGPSLEDLF+ 
Sbjct: 70  AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129

Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 567
           C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G    K   +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 189

Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
           K+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  GSLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249

Query: 748 QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 927
           QGLKA T +++Y++I + K +TPIEVLC+ +P E ATYL + R L F +KPDY YLR+LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 308

Query: 928 RNLFHRQGFSYDYVFDW 978
            +LF R+G+ +DY +DW
Sbjct: 309 TDLFDRKGYMFDYEYDW 325


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 110,543,990
Number of extensions: 3222440
Number of successful extensions: 21362
Number of sequences better than 1.0e-05: 271
Number of HSP's gapped: 20678
Number of HSP's successfully gapped: 272
Length of query: 962
Length of database: 18,297,164
Length adjustment: 112
Effective length of query: 850
Effective length of database: 14,605,196
Effective search space: 12414416600
Effective search space used: 12414416600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0024_F10
         (2888 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_533137.2| PREDICTED: similar to casein kinase 1, delta is...   740   0.0  
Alignment   gi|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon i...   689   0.0  
Alignment   gi|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon i...   637   0.0  
Alignment   gi|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon i...   627   e-179
Alignment   gi|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon i...   609   e-174
Alignment   gi|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon i...   602   e-172
Alignment   gi|XP_860895.1| PREDICTED: similar to casein kinase 1 epsilon i...   501   e-141
Alignment   gi|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 ...   473   e-133
Alignment   gi|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha is...   473   e-133
Alignment   gi|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha is...   473   e-133

>ref|XP_533137.2| PREDICTED: similar to casein kinase 1, delta isoform 2 [Canis
            familiaris].
          Length = 393

 Score =  740 bits (1910), Expect = 0.0
 Identities = 364/384 (94%), Positives = 365/384 (95%)
 Frame = +1

Query: 184  GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 363
            GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL
Sbjct: 10   GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 69

Query: 364  GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 543
            GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV
Sbjct: 70   GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 129

Query: 544  YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 723
            YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY
Sbjct: 130  YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 189

Query: 724  FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD 903
            FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK YPSEFATYLNFCRSLRFDDKPD
Sbjct: 190  FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKSYPSEFATYLNFCRSLRFDDKPD 249

Query: 904  YSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXXXXXXXXXXXXXXXXLRHSRNPATRG 1083
            YSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS                LRHSRNPA RG
Sbjct: 250  YSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPAARG 309

Query: 1084 LPSTASGRLRGTQEAAPPTPLTPTSHTANTSPRPVSGMERERKVSMRLHRGAPVNISSSD 1263
            LPSTASGRLRGTQE APPTPLTPTSHTANTSPRPVSG+ERERKVSMRLHRGAPVNISSSD
Sbjct: 310  LPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGVERERKVSMRLHRGAPVNISSSD 369

Query: 1264 LTGRQDTSRMSTSQNSIPFEHHGK 1335
            LTGRQDTSRMSTSQNSIPFEHHGK
Sbjct: 370  LTGRQDTSRMSTSQNSIPFEHHGK 393


>ref|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon isoform 3 [Canis
            familiaris].
          Length = 416

 Score =  689 bits (1778), Expect = 0.0
 Identities = 343/416 (82%), Positives = 360/416 (86%), Gaps = 7/416 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1009 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTPLTPTSHTA 1167
                           R    R  ATR LP        + RLR   E    TP +      
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPTASTPASRIQQAG 360

Query: 1168 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 416


>ref|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon isoform 6 [Canis
            familiaris].
          Length = 407

 Score =  637 bits (1643), Expect = 0.0
 Identities = 324/416 (77%), Positives = 345/416 (82%), Gaps = 7/416 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGI +       S+G ++      SLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIGEP-----FSVGGMI----TRSLPWQGLKAATKRQKYERISEKKMSTPIEVL 231

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 232  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 291

Query: 1009 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTPLTPTSHTA 1167
                           R    R  ATR LP        + RLR   E    TP +      
Sbjct: 292  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPTASTPASRIQQAG 351

Query: 1168 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 352  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 407


>ref|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon isoform 8 [Canis
            familiaris].
          Length = 385

 Score =  627 bits (1616), Expect = e-179
 Identities = 313/378 (82%), Positives = 326/378 (86%), Gaps = 7/378 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1009 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTPLTPTSHTA 1167
                           R    R  ATR LP        + RLR   E    TP +      
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPTASTPASRIQQAG 360

Query: 1168 NTSPRPVSGMERERKVSM 1221
            NTSPR +S ++RERK S+
Sbjct: 361  NTSPRAISRVDRERKTSV 378


>ref|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon isoform 7 [Canis
            familiaris].
          Length = 431

 Score =  609 bits (1570), Expect = e-174
 Identities = 313/395 (79%), Positives = 324/395 (82%), Gaps = 5/395 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKF     
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFMRPPS 300

Query: 1009 XXXXXXXXXXXXXXLRHSRNPATRGL-PSTASGRLRGTQEAAP----PTPLTPTSHTANT 1173
                          L   R P  RG  P  A  R RG   AAP    P P    +H  + 
Sbjct: 301  CQPPALPCGRPQDQL--GRGPEPRGCGPGAARTRARGEDGAAPGFRDPGPAPWATHGGHR 358

Query: 1174 SPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQ 1278
             P P          S+  H  +  + S  DLT RQ
Sbjct: 359  QPAPQCCRAHSFHPSLP-HPASWQHFSQGDLTSRQ 392


>ref|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon isoform 1 [Canis
            familiaris].
          Length = 367

 Score =  602 bits (1551), Expect = e-172
 Identities = 290/298 (97%), Positives = 296/298 (99%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 1002
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 298


>ref|XP_860895.1| PREDICTED: similar to casein kinase 1 epsilon isoform 5 [Canis
            familiaris].
          Length = 359

 Score =  501 bits (1290), Expect = e-141
 Identities = 268/416 (64%), Positives = 292/416 (70%), Gaps = 7/416 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI               
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI--------------- 165

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
                                           P++  K  T   +Y  I+     T + + 
Sbjct: 166  -------------------------------PYRENKNLTGTARYASIN-----THLGI- 188

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
                 +EF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 189  -----AEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 243

Query: 1009 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTPLTPTSHTA 1167
                           R    R  ATR LP        + RLR   E    TP +      
Sbjct: 244  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPTASTPASRIQQAG 303

Query: 1168 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 304  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 359


>ref|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 isoform 15 [Canis
           familiaris].
          Length = 325

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
           (CK1) isoform 1 [Canis familiaris].
          Length = 337

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
           (CK1) isoform 3 [Canis familiaris].
          Length = 336

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 113,483,727
Number of extensions: 3329636
Number of successful extensions: 22908
Number of sequences better than 1.0e-05: 320
Number of HSP's gapped: 22291
Number of HSP's successfully gapped: 322
Length of query: 962
Length of database: 18,874,504
Length adjustment: 112
Effective length of query: 850
Effective length of database: 15,140,872
Effective search space: 12869741200
Effective search space used: 12869741200
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0024_F10
         (2888 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus mu...   795   0.0  
Alignment   gi|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus mu...   772   0.0  
Alignment   gi|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].      689   0.0  
Alignment   gi|NP_666199.1| casein kinase I isoform alpha [Mus musculus].        473   e-133
Alignment   gi|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].      363   e-100
Alignment   gi|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].      362   1e-99
Alignment   gi|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [M...   357   4e-98
Alignment   gi|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus ...   343   6e-94
Alignment   gi|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].              180   6e-45
Alignment   gi|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].    170   5e-42

>ref|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus musculus].
          Length = 409

 Score =  795 bits (2053), Expect = 0.0
 Identities = 391/409 (95%), Positives = 392/409 (95%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1009 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPLTPTSHTANTSPRPV 1188
                          LRHSRNPATRGLPSTASGRLRGTQE APPTPLTPTSHTANTSPRPV
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPV 360

Query: 1189 SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            SGMERERKVSMRLHRGAPVN+SSSDLTGRQDTSRMSTSQNSIPFEHHGK
Sbjct: 361  SGMERERKVSMRLHRGAPVNVSSSDLTGRQDTSRMSTSQNSIPFEHHGK 409


>ref|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus musculus].
          Length = 415

 Score =  772 bits (1994), Expect(2) = 0.0
 Identities = 381/399 (95%), Positives = 382/399 (95%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1    MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS  
Sbjct: 241  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300

Query: 1009 XXXXXXXXXXXXXXLRHSRNPATRGLPSTASGRLRGTQEAAPPTPLTPTSHTANTSPRPV 1188
                          LRHSRNPATRGLPSTASGRLRGTQE APPTPLTPTSHTANTSPRPV
Sbjct: 301  ADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPV 360

Query: 1189 SGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQ 1305
            SGMERERKVSMRLHRGAPVN+SSSDLTGRQDTSRMSTSQ
Sbjct: 361  SGMERERKVSMRLHRGAPVNVSSSDLTGRQDTSRMSTSQ 399



 Score = 28.9 bits (63), Expect(2) = 0.0
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +2

Query: 1370 IAGRVAASGLQSAVHR 1417
            I GRVA+SGLQS VHR
Sbjct: 400  IPGRVASSGLQSVVHR 415


>ref|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].
          Length = 416

 Score =  689 bits (1779), Expect = 0.0
 Identities = 343/416 (82%), Positives = 360/416 (86%), Gaps = 7/416 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1009 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTPLTPTSHTA 1167
                           R    R  ATR LP        + RLR   E    TP +    T 
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTPASRIQQTG 360

Query: 1168 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            NTSPR +S  +RERKVSMRLHRGAP N+SSSDLTGRQ+ SR++ SQ S+PF+H GK
Sbjct: 361  NTSPRAISRADRERKVSMRLHRGAPANVSSSDLTGRQEVSRLAASQTSVPFDHLGK 416


>ref|NP_666199.1| casein kinase I isoform alpha [Mus musculus].
          Length = 325

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].
          Length = 424

 Score =  363 bits (933), Expect = e-100
 Identities = 173/290 (59%), Positives = 226/290 (77%), Gaps = 2/290 (0%)
 Frame = +1

Query: 115 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 294
           L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E + YK +  G
Sbjct: 37  LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 96

Query: 295 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 474
            GIP + + G  G YN MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSK
Sbjct: 97  DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 156

Query: 475 NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
           N I+RDVKP+NFL+G    K   +++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY 
Sbjct: 157 NLIYRDVKPENFLIGRPGNKAQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 216

Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
           SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIEVL
Sbjct: 217 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 276

Query: 829 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
           C+ +P E ATYL + R L F +KPDY YLR+LF +LF R+G+ +DY +DW
Sbjct: 277 CENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 326


>ref|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].
          Length = 459

 Score =  362 bits (928), Expect = 1e-99
 Identities = 171/300 (57%), Positives = 232/300 (77%), Gaps = 3/300 (1%)
 Frame = +1

Query: 88  TGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIES 267
           +G + ++  L VG  +R+G+KIG G+FG++ LG ++   E VAIKLE +K++ PQLH+E 
Sbjct: 29  SGTSTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEY 88

Query: 268 KIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 444
           + YK +   G G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+
Sbjct: 89  RFYKQLGSAGEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQL 148

Query: 445 ISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 618
           +SR+EY+HSKN I+RDVKP+NFL+G    KK ++++IIDFGLAK+Y D  T +HIPYRE+
Sbjct: 149 LSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYVDPETKKHIPYREH 208

Query: 619 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE 798
           K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I +
Sbjct: 209 KSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 268

Query: 799 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
            K +TPIE LC+ +P E ATYL + R L F +KPDY YLR LF +LF R+G+++DY +DW
Sbjct: 269 TKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERKGYTFDYAYDW 328


>ref|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [Mus musculus].
          Length = 415

 Score =  357 bits (915), Expect = 4e-98
 Identities = 174/321 (54%), Positives = 236/321 (73%), Gaps = 6/321 (1%)
 Frame = +1

Query: 34  KGDLGPGDP-SPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAA 201
           KG+L  G   S +   R   G+  +      L VG  +R+G+KIG G+FG++ LG ++  
Sbjct: 9   KGELEEGRRMSKTGTSRSNHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYT 68

Query: 202 GEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLED 381
            E VAIKLE +K++ PQLH+E + YK +    G+P + + G  G YN MV+ELLGPSLED
Sbjct: 69  NEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTEGVPQVYYFGPCGKYNAMVLELLGPSLED 128

Query: 382 LFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIID 555
           LF+ C R F+LKTVL++A Q+I+R+EY+H+K+ I+RDVKP+NFL+G    K+ + ++IID
Sbjct: 129 LFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGSKRQHSIHIID 188

Query: 556 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 735
           FGLAK+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF  G
Sbjct: 189 FGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 248

Query: 736 SLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 915
           SLPWQGLKA T +++Y++I + K +TPIEVLC+ +P E ATYL + R L F +KPDY YL
Sbjct: 249 SLPWQGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYL 308

Query: 916 RQLFRNLFHRQGFSYDYVFDW 978
           R+LF +LF R G+ +DY +DW
Sbjct: 309 RKLFTDLFDRSGYVFDYEYDW 329


>ref|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus musculus].
          Length = 442

 Score =  343 bits (879), Expect = 6e-94
 Identities = 174/348 (50%), Positives = 236/348 (67%), Gaps = 33/348 (9%)
 Frame = +1

Query: 34   KGDLGPGDP-SPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAA 201
            KG+L  G   S +   R   G+  +      L VG  +R+G+KIG G+FG++ LG ++  
Sbjct: 9    KGELEEGRRMSKTGTSRSNHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYT 68

Query: 202  GEEVAIKLECVKTKHPQLHIESKIYKMMQG---------------------------GVG 300
             E VAIKLE +K++ PQLH+E + YK +                               G
Sbjct: 69   NEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTGEADSGTGPALLGQQWLRTPSMDVSFAEG 128

Query: 301  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF 480
            +P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+I+R+EY+H+K+ 
Sbjct: 129  VPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSL 188

Query: 481  IHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
            I+RDVKP+NFL+G    K+ + ++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY SI
Sbjct: 189  IYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 248

Query: 655  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 834
            NTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIEVLC+
Sbjct: 249  NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 308

Query: 835  GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
             +P E ATYL + R L F +KPDY YLR+LF +LF R G+ +DY +DW
Sbjct: 309  SFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGYVFDYEYDW 356


>ref|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].
          Length = 1308

 Score =  180 bits (456), Expect = 6e-45
 Identities = 109/292 (37%), Positives = 155/292 (53%), Gaps = 6/292 (2%)
 Frame = +1

Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 300
           V +R+++ +KIG G FG+IY   D+   E VA+K+E  +     L +E  + K +QG   
Sbjct: 30  VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89

Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
           +     CG    +N +VM+L G +L DL     R  F+L T L L  Q++  IE IHS  
Sbjct: 90  VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149

Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
           F+HRD+KP NF MG L       Y++DFGLA++Y +  T    P R      GT RYAS+
Sbjct: 150 FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208

Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK----RQKYERISEKKMSTPIE 822
           N H   E  R DDL SL Y+L+ F +G LPW+ +K   +    ++KYE            
Sbjct: 209 NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258

Query: 823 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
           +L K  PSEF  +L+   SL +  KPDY  +  +F N    +G + +  FDW
Sbjct: 259 MLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKERGIAENEAFDW 310


>ref|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].
          Length = 1243

 Score =  170 bits (431), Expect = 5e-42
 Identities = 106/288 (36%), Positives = 150/288 (52%), Gaps = 2/288 (0%)
 Frame = +1

Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 300
           V  R+++ RKIG G FG+IY   D+   E VA+K+E  +     L +E  + K +QG   
Sbjct: 17  VKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 76

Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
           +     CG    +N +VM+L G +L DL    SR  F++ T L L  Q++  IE IHS  
Sbjct: 77  VCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGKQILESIESIHSVG 136

Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
           F+HRD+KP NF MG         +++DFGLA+++ ++      P R      GT RYASI
Sbjct: 137 FLHRDIKPSNFAMGRFPSTCRKCFMLDFGLARQFTNSCGDVR-PPRAVAGFRGTVRYASI 195

Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 834
           N H   E  R DDL SL Y+L+ F +G LPW+ +K        E++   K      ++ K
Sbjct: 196 NAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIK------DKEQVGSIKERYDHRLMLK 249

Query: 835 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
             P EF+T+L+   SL +  KPDY  L  +F N     G      FDW
Sbjct: 250 HLPPEFSTFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDW 297


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 92,751,096
Number of extensions: 2637068
Number of successful extensions: 16710
Number of sequences better than 1.0e-05: 216
Number of HSP's gapped: 16202
Number of HSP's successfully gapped: 218
Length of query: 962
Length of database: 15,617,559
Length adjustment: 111
Effective length of query: 851
Effective length of database: 12,283,563
Effective search space: 10453312113
Effective search space used: 10453312113
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0024_F10
         (2888 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon i...   689   0.0  
Alignment   gi|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon i...   689   0.0  
Alignment   gi|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051...   478   e-135
Alignment   gi|XP_003124136.1| PREDICTED: casein kinase I isoform alpha iso...   473   e-133
Alignment   gi|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Su...   457   e-128
Alignment   gi|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [...   338   1e-92
Alignment   gi|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-l...   305   1e-82
Alignment   gi|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-l...   291   1e-78
Alignment   gi|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa].     180   4e-45
Alignment   gi|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa].     169   8e-42

>ref|XP_003355386.1| PREDICTED: casein kinase I isoform epsilon isoform 2 [Sus scrofa].
          Length = 416

 Score =  689 bits (1778), Expect = 0.0
 Identities = 343/416 (82%), Positives = 360/416 (86%), Gaps = 7/416 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1009 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTPLTPTSHTA 1167
                           R    R  ATR LP        + RLR   E    TP +      
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTPASRLQQAG 360

Query: 1168 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 416


>ref|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon isoform 1 [Sus scrofa].
          Length = 416

 Score =  689 bits (1778), Expect = 0.0
 Identities = 343/416 (82%), Positives = 360/416 (86%), Gaps = 7/416 (1%)
 Frame = +1

Query: 109  MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
            MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1    MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60

Query: 289  GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
            GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61   GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120

Query: 469  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
            SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121  SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180

Query: 649  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 828
            SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL
Sbjct: 181  SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240

Query: 829  CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASXX 1008
            CKGYPSEF+TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGA+  
Sbjct: 241  CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300

Query: 1009 XXXXXXXXXXXXXXLR--HSRNPATRGLP-----STASGRLRGTQEAAPPTPLTPTSHTA 1167
                           R    R  ATR LP        + RLR   E    TP +      
Sbjct: 301  PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATANRLRSAAEPVASTPASRLQQAG 360

Query: 1168 NTSPRPVSGMERERKVSMRLHRGAPVNISSSDLTGRQDTSRMSTSQNSIPFEHHGK 1335
            NTSPR +S ++RERKVSMRLHRGAP N+SSSDLTGRQ+ SR+S SQ S+PF+H GK
Sbjct: 361  NTSPRAISRVDRERKVSMRLHRGAPANVSSSDLTGRQEVSRISASQTSVPFDHLGK 416


>ref|XP_003357975.1| PREDICTED: hypothetical protein LOC100625051 [Sus scrofa].
          Length = 620

 Score =  478 bits (1230), Expect = e-135
 Identities = 233/236 (98%), Positives = 234/236 (99%)
 Frame = +1

Query: 295  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 474
            VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK
Sbjct: 36   VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 95

Query: 475  NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
            NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI
Sbjct: 96   NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 155

Query: 655  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 834
            NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK+MSTPIEVLCK
Sbjct: 156  NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKEMSTPIEVLCK 215

Query: 835  GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 1002
              PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS
Sbjct: 216  -LPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAS 270



 Score = 50.1 bits (118), Expect = 7e-06
 Identities = 24/43 (55%), Positives = 24/43 (55%)
 Frame = +3

Query: 2082 ACSQWTRWALESSEXXXXXXXXXXXXXXXXXXXHGEEEAEPGD 2210
            ACSQWTRWALESSE                   HGEEEAEPGD
Sbjct: 549  ACSQWTRWALESSERLDSAGDSAGAAGASRLSSHGEEEAEPGD 591


>ref|XP_003124136.1| PREDICTED: casein kinase I isoform alpha isoform 1 [Sus scrofa].
          Length = 337

 Score =  473 bits (1216), Expect = e-133
 Identities = 223/293 (76%), Positives = 255/293 (87%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
           KNFIHRD+KPDNFLMG+G+  N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           IN HLGIEQSRRDD+ESLGYVLMYFN  SLPWQGLKAATK+QKYE+ISEKKMSTP+EVLC
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK 990
           KG+P+EFA YLN+CR LRF++ PDY YLRQLFR LF      YDY FDW MLK
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLK 302


>ref|XP_003354399.1| PREDICTED: casein kinase I isoform alpha [Sus scrofa].
          Length = 364

 Score =  457 bits (1177), Expect = e-128
 Identities = 223/321 (69%), Positives = 255/321 (79%), Gaps = 28/321 (8%)
 Frame = +1

Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
           E  VG +Y+L RKIGSGSFGDIYL  +I  GEEVA+KLE  K +HPQL  ESK+YK++QG
Sbjct: 10  EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69

Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
           GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70  GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129

Query: 472 KNFIHRDVKPDNFLMGLGKKGNL----------------------------VYIIDFGLA 567
           KNFIHRD+KPDNFLMG+G+  N                             +++IDFGLA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189

Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
           KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN  SLPW
Sbjct: 190 KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249

Query: 748 QGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 927
           QGLKAATK+QKYE+ISEKKMSTP+EVLCKG+P+EFA YLN+CR LRF++ PDY YLRQLF
Sbjct: 250 QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLF 309

Query: 928 RNLFHRQGFSYDYVFDWNMLK 990
           R LF      YDY FDW MLK
Sbjct: 310 RILFRTLNHQYDYTFDWTMLK 330


>ref|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2 [Sus scrofa].
          Length = 409

 Score =  338 bits (867), Expect = 1e-92
 Identities = 166/320 (51%), Positives = 227/320 (70%), Gaps = 5/320 (1%)
 Frame = +1

Query: 34  KGDLGPGDPSPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAAG 204
           KG+   G     A GR   G+  +      L VG  +R+G+KIG G+FG++ LG ++   
Sbjct: 9   KGESEEGRRMSKAGGRTSHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTN 68

Query: 205 EEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDL 384
           E VAIKLE +K++ PQLH+E + YK +    G+P + + G  G YN MV+ELLGPSLEDL
Sbjct: 69  EYVAIKLEPIKSRAPQLHLEYRFYKQLSAAEGVPQVYYFGPCGKYNAMVLELLGPSLEDL 128

Query: 385 FNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDF 558
           F+ C R F+LKTVL++A Q+I+R+EY+H+K+ I+RDVKP+NFL+G    K+ + ++IIDF
Sbjct: 129 FDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDF 188

Query: 559 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 738
           GLAK+Y D  T +HIPYRE+K+LTGTARY SINTHLG     + +L + G + MYF  GS
Sbjct: 189 GLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLG-----KGELHAXGPMFMYFLRGS 243

Query: 739 LPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLR 918
           LPWQGLKA T +++Y++I + K +TPIEVLC+ +P E ATYL + R L F +KPDY YLR
Sbjct: 244 LPWQGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYLR 303

Query: 919 QLFRNLFHRQGFSYDYVFDW 978
           +LF +LF R GF +DY +DW
Sbjct: 304 KLFTDLFDRSGFVFDYEYDW 323


>ref|XP_001927058.3| PREDICTED: casein kinase I isoform gamma-1-like [Sus scrofa].
          Length = 494

 Score =  305 bits (780), Expect = 1e-82
 Identities = 141/229 (61%), Positives = 184/229 (80%), Gaps = 2/229 (0%)
 Frame = +1

Query: 298 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 477
           G+P + + G  G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q++SR+EY+HSKN
Sbjct: 128 GLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKN 187

Query: 478 FIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
            I+RDVKP+NFL+G    KK ++++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY S
Sbjct: 188 LIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMS 247

Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 831
           INTHLG EQSRRDDLE+LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIE LC
Sbjct: 248 INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALC 307

Query: 832 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
           + +P E ATYL + R L F +KPDY YLR LF +LF R+G+++DY +DW
Sbjct: 308 ENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERKGYAFDYAYDW 356


>ref|XP_003123926.2| PREDICTED: casein kinase I isoform gamma-3-like [Sus scrofa].
          Length = 311

 Score =  291 bits (745), Expect = 1e-78
 Identities = 137/213 (64%), Positives = 174/213 (81%), Gaps = 2/213 (0%)
 Frame = +1

Query: 346 MVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL- 522
           MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G  
Sbjct: 1   MVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRP 60

Query: 523 -GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE 699
             K   +++IIDFGLAK+Y D  T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE
Sbjct: 61  GNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE 120

Query: 700 SLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRS 879
           +LG++ MYF  GSLPWQGLKA T +++Y++I + K +TPIEVLC+ +P E ATYL + R 
Sbjct: 121 ALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRR 180

Query: 880 LRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
           L F +KPDY YLR+LF +LF R+G+ +DY +DW
Sbjct: 181 LDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 213


>ref|XP_001929339.2| PREDICTED: tau-tubulin kinase 1 [Sus scrofa].
          Length = 1305

 Score =  180 bits (456), Expect = 4e-45
 Identities = 109/292 (37%), Positives = 155/292 (53%), Gaps = 6/292 (2%)
 Frame = +1

Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 300
           V +R+++ +KIG G FG+IY   D+   E VA+K+E  +     L +E  + K +QG   
Sbjct: 30  VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89

Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
           +     CG    +N +VM+L G +L DL     R  F+L T L L  Q++  IE IHS  
Sbjct: 90  VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149

Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
           F+HRD+KP NF MG L       Y++DFGLA++Y +  T    P R      GT RYAS+
Sbjct: 150 FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208

Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK----RQKYERISEKKMSTPIE 822
           N H   E  R DDL SL Y+L+ F +G LPW+ +K   +    ++KYE            
Sbjct: 209 NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258

Query: 823 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
           +L K  PSEF  +L+   SL +  KPDY  +  +F N    +G + +  FDW
Sbjct: 259 MLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMKERGIAENEAFDW 310


>ref|XP_003353431.1| PREDICTED: tau-tubulin kinase 2 [Sus scrofa].
          Length = 1243

 Score =  169 bits (428), Expect = 8e-42
 Identities = 106/288 (36%), Positives = 149/288 (51%), Gaps = 2/288 (0%)
 Frame = +1

Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 300
           V  R+++ RKIG G FG+IY   D+   E VA+K+E  +     L +E  + K +QG   
Sbjct: 17  VKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 76

Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
           +     CG    +N +VM+L G +L DL    SR  F++ T L L  Q++  IE IHS  
Sbjct: 77  VCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGRQILESIESIHSVG 136

Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
           F+HRD+KP NF MG         Y++DFGLA+++ ++      P R      GT RYASI
Sbjct: 137 FLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQFTNSCGDVR-PPRAVAGFRGTVRYASI 195

Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 834
           N H   E  R DDL SL Y+L+ F +G LPW+ +K        E++   K      ++ K
Sbjct: 196 NAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIK------DKEQVGSIKERYDHRLMLK 249

Query: 835 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 978
             P EF+ +L+   SL +  KPDY  L  +F N     G      FDW
Sbjct: 250 HLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDW 297


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 70,288,007
Number of extensions: 2087970
Number of successful extensions: 14336
Number of sequences better than 1.0e-05: 112
Number of HSP's gapped: 14030
Number of HSP's successfully gapped: 113
Length of query: 962
Length of database: 11,343,932
Length adjustment: 108
Effective length of query: 854
Effective length of database: 8,655,056
Effective search space: 7391417824
Effective search space used: 7391417824
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PBL01_0024_F10
         (2888 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr12                                                        1631   0.0  
Sscrofa_Chr05                                                         345   8e-92
Sscrofa_Chr02                                                          64   5e-07

>Sscrofa_Chr12 
||          Length = 63588571

 Score = 1631 bits (823), Expect = 0.0
 Identities = 829/831 (99%)
 Strand = Plus / Minus

                                                                          
Query: 2043   acctccctgaccctccctgccatccccgtggactgaagcgcctgctcacagtggacccgc 2102
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970781 acctccctgaccctccctgccatccccgtggactgaagcgcctgctcacagtggacccgc 970722

                                                                          
Query: 2103   tgggcactcgagtcgtcagagcgattggacagtgccggcgacagcgcgggcgcagcaggt 2162
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970721 tgggcactcgagtcgtcagagcgattggacagtgccggcgacagcgcgggcgcagcaggt 970662

                                                                          
Query: 2163   gcctcccgattgagcagccacggcgaggaggaagctgagcctggagacgtggggccctcc 2222
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970661 gcctcccgattgagcagccacggcgaggaggaagctgagcctggagacgtggggccctcc 970602

                                                                          
Query: 2223   tgggggcggggtgcttgtttcagtggcgggtgcctccgcgcctttgcgtctgggaggttc 2282
              |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 970601 tgggggcggggtgcttgtttcagtggcgggtgcctccgcgccttcgcgtctgggaggttc 970542

                                                                          
Query: 2283   tctaaacagactgtcggcgttaatagcgcagactggtcttccgtccgtgttagcatccgg 2342
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970541 tctaaacagactgtcggcgttaatagcgcagactggtcttccgtccgtgttagcatccgg 970482

                                                                          
Query: 2343   atgaatggccaagggctgtggcgtccgccccggatgccagctttgcccaggcccaggcag 2402
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970481 atgaatggccaagggctgtggcgtccgccccggatgccagctttgcccaggcccaggcag 970422

                                                                          
Query: 2403   gccggcgcacccagggggatcggctctgaagtgccgcgaagcaggggactcttgacagcc 2462
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970421 gccggcgcacccagggggatcggctctgaagtgccgcgaagcaggggactcttgacagcc 970362

                                                                          
Query: 2463   tgaccgcccagcagggcgagggtctggatgggggtgggggcctgggcagccaggggcctg 2522
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970361 tgaccacccagcagggcgagggtctggatgggggtgggggcctgggcagccaggggcctg 970302

                                                                          
Query: 2523   aaaggcgtccgtgtcctgggacaccctgactgccgagtggccggcccggagcacagccgt 2582
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970301 aaaggcgtccgtgtcctgggacaccctgactgccgagtggccggcccggagcacagccgt 970242

                                                                          
Query: 2583   ttgcgtctttccgaatcccgagccggctgctccgtgtgttggggcgcgggcactcggccg 2642
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970241 ttgcgtctttccgaatcccgagccggctgctccgtgtgttggggcgcgggcactcggccg 970182

                                                                          
Query: 2643   cgtgggctgagacccaggagggtcagcgcgagctgcccagtgccttgcgcagagggcgcc 2702
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970181 cgtgggctgagacccaggagggtcagcgcgagctgcccagtgccttgcgcagagggcgcc 970122

                                                                          
Query: 2703   tgccttcccggggaggcattggcagctgcggccctcgccccgcgccgcggctgcaacgtc 2762
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970121 tgccttcccggggaggcattggcagctgcggccctcgccccgcgccgcggctgcaacgtc 970062

                                                                          
Query: 2763   tgcatcgcctgtgtgccggcggccggtccctgcgctgcgcttctgttggatcactgtacc 2822
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970061 tgcatcgcctgtgtgccggcggccggtccctgcgctgcgcttctgttggatcactgtacc 970002

                                                                 
Query: 2823   cgtgtccaccctccgtgtaaataataaactcgtgaccacttccacctctgc 2873
              |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970001 cgtgtccaccctccgtgtaaataataaactcgtgaccacttccacctctgc 969951



 Score = 1213 bits (612), Expect = 0.0
 Identities = 618/620 (99%)
 Strand = Plus / Minus

                                                                          
Query: 1369   gattgccggtcgggtggctgccagcggtctccagtccgccgtgcaccggtgagagcgctc 1428
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971455 gattgccggtcgggtggctgccagcggtctccagtccgccgtgcaccggtgagagcgctc 971396

                                                                          
Query: 1429   ctttggctgagggcagacatgcatggccgacctactctgttatagtgacacgccccggtc 1488
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971395 ctttggctgagggcagacatgcatggccgacctactctgttatagtgacacgccccggtc 971336

                                                                          
Query: 1489   tagaaccgaaccgttaccaccgggagctctccaggccacccacccagcgacgcccacggg 1548
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971335 tagaaccgaaccgttaccaccgggagctctccaggccacccacccagcgacgcccacggg 971276

                                                                          
Query: 1549   gaaacaaacacaaacccaaccggacagactgcacgcgctgccatcgccaggggctgcgcc 1608
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971275 gaaacaaacacaaacccaaccggacagactgcacgcgctgccatcgccaggggctgcgcc 971216

                                                                          
Query: 1609   gaggccccgcgagctcggtggcagcggggctgggaagaagagagacgagcgcagagagaa 1668
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971215 gaggccccgcgagctcggtggcagcggggctgggaagaagagagacgagcgcagagagaa 971156

                                                                          
Query: 1669   tcagactcccatccaagagcctcttggtccggtcccttgggtggcggcgcgcccgtgccc 1728
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 971155 tcagactcccatccaagagcctcttggtccggtccctcgggtggcggcgcgcccgtgccc 971096

                                                                          
Query: 1729   ctgccgagtctgccgtaaccaccgaccttctacccggctaagacagttttgtatcatttt 1788
              ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 971095 ctgccgagtctgccgtaaccaccgaccttctactcggctaagacagttttgtatcatttt 971036

                                                                          
Query: 1789   gctaaaaattattggcttaaatctgtgtaaagaaacctgtctttttattgtttctttcct 1848
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971035 gctaaaaattattggcttaaatctgtgtaaagaaacctgtctttttattgtttctttcct 970976

                                                                          
Query: 1849   gtctgttttgctgtctgtaaagaaatccgaagcagacgctggcgtggagtctgggagggc 1908
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970975 gtctgttttgctgtctgtaaagaaatccgaagcagacgctggcgtggagtctgggagggc 970916

                                                                          
Query: 1909   aggccgggcgcggaggagcccacggggcctcccggtctgtgtctcgtgctgtcttgtgcg 1968
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970915 aggccgggcgcggaggagcccacggggcctcccggtctgtgtctcgtgctgtcttgtgcg 970856

                                  
Query: 1969   ggccgcttgggagcctggca 1988
              ||||||||||||||||||||
Sbjct: 970855 ggccgcttgggagcctggca 970836



 Score =  456 bits (230), Expect = e-125
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                          
Query: 444    gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 503
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977279 gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 977220

                                                                          
Query: 504    caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 563
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977219 caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 977160

                                                                          
Query: 564    ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 623
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977159 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 977100

                                                                
Query: 624    cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 673
              ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977099 cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 977050



 Score =  311 bits (157), Expect = 1e-81
 Identities = 160/161 (99%)
 Strand = Plus / Minus

                                                                          
Query: 673    gaacaatctcggagggacgacctggaatctctgggctacgtgctcatgtacttcaacctg 732
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976864 gaacaatctcggagggacgacctggaatctctgggctacgtgctcatgtacttcaacctg 976805

                                                                          
Query: 733    ggctcgctgccctggcagggcctgaaggcggccaccaagcgccagaagtacgagcgcatc 792
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976804 ggctcgctgccctggcagggcctgaaggcggccaccaagcgccagaagtacgagcgcatc 976745

                                                       
Query: 793    agcgagaagaagatgtccacgcccatcgaggtgctctgcaa 833
              ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 976744 agcgagaaggagatgtccacgcccatcgaggtgctctgcaa 976704



 Score =  299 bits (151), Expect = 4e-78
 Identities = 151/151 (100%)
 Strand = Plus / Minus

                                                                          
Query: 294    agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 353
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977841 agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 977782

                                                                          
Query: 354    ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 413
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977781 ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 977722

                                             
Query: 414    caagaccgtcctgctgctcgctgaccagatg 444
              |||||||||||||||||||||||||||||||
Sbjct: 977721 caagaccgtcctgctgctcgctgaccagatg 977691



 Score =  297 bits (150), Expect = 2e-77
 Identities = 150/150 (100%)
 Strand = Plus / Minus

                                                                          
Query: 845    ccgagttcgccacgtacctgaacttctgccgttccctgcgctttgatgacaagcctgact 904
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976099 ccgagttcgccacgtacctgaacttctgccgttccctgcgctttgatgacaagcctgact 976040

                                                                          
Query: 905    actcgtacctgaggcagctcttcaggaacctgttccaccgccagggcttctcctacgact 964
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976039 actcgtacctgaggcagctcttcaggaacctgttccaccgccagggcttctcctacgact 975980

                                            
Query: 965    acgtctttgactggaacatgctcaagtttg 994
              ||||||||||||||||||||||||||||||
Sbjct: 975979 acgtctttgactggaacatgctcaagtttg 975950



 Score =  222 bits (112), Expect = 8e-55
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                          
Query: 184    ggtacggacattgctgcgggagaagaagttgccatcaagcttgaatgtgtcaaaactaag 243
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894955 ggtacggacattgctgcgggagaagaagttgccatcaagcttgaatgtgtcaaaactaag 895014

                                                                  
Query: 244    caccctcagctccacatcgagagcaaaatctacaagatgatgcagggaggag 295
              ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895015 caccctcagctccacatcgagagcaaaatctacaagatgatgcagggaggag 895066



 Score =  210 bits (106), Expect = 3e-51
 Identities = 106/106 (100%)
 Strand = Plus / Plus

                                                                          
Query: 1      cagcgcgatggcggcggctccttcaggcccctgaagggggatttaggcccgggagatccg 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887680 cagcgcgatggcggcggctccttcaggcccctgaagggggatttaggcccgggagatccg 887739

                                                            
Query: 61     agtccatccgcggcggggagagggcgaacggggttggcggaggccg 106
              ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887740 agtccatccgcggcggggagagggcgaacggggttggcggaggccg 887785



 Score =  133 bits (67), Expect = 6e-28
 Identities = 67/67 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1303   cagaatagcattcctttcgaacaccacggcaagtagctgcacggctcccgtcggaaggca 1362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972421 cagaatagcattcctttcgaacaccacggcaagtagctgcacggctcccgtcggaaggca 972362

                     
Query: 1363   gcgctgg 1369
              |||||||
Sbjct: 972361 gcgctgg 972355



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 40/40 (100%)
 Strand = Plus / Minus

                                                      
Query: 994    ggagccagccgggcagccgacgacgccgagcgggagcgcc 1033
              ||||||||||||||||||||||||||||||||||||||||
Sbjct: 974526 ggagccagccgggcagccgacgacgccgagcgggagcgcc 974487


>Sscrofa_Chr05 
||          Length = 111506441

 Score =  345 bits (174), Expect = 8e-92
 Identities = 216/230 (93%)
 Strand = Plus / Plus

                                                                           
Query: 444     gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 503
               ||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct: 6893186 gatcagccgcatcgagtacatccactccaagaacttcatccaccgggacgtcaaacccga 6893245

                                                                           
Query: 504     caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 563
               ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6893246 caacttcctcatgggactggggaagaagggcaacctggtgtacatcatcgacttcgggct 6893305

                                                                           
Query: 564     ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 623
               |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 6893306 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgggaaaacaagaa 6893365

                                                                 
Query: 624     cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcg 673
               | | |||||||| || |||||||||||||||||||| ||||| |||||||
Sbjct: 6893366 cttgaccggcacggcccgctacgcctccatcaacacccacctgggcatcg 6893415



 Score =  236 bits (119), Expect = 6e-59
 Identities = 137/143 (95%)
 Strand = Plus / Plus

                                                                           
Query: 702     tctgggctacgtgctcatgtacttcaacctgggctcgctgccctggcagggcctgaaggc 761
               |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 6894076 tctgggttacgtgctcatgtacttcaacctgggctccctgccctggcagggcctcaaggc 6894135

                                                                           
Query: 762     ggccaccaagcgccagaagtacgagcgcatcagcgagaagaagatgtccacgcccatcga 821
               ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 6894136 ggccaccaagcgccagaagtatgagcgcatcagcgagaagaagatgtcgacgcccatcga 6894195

                                      
Query: 822     ggtgctctgcaaaggctacccct 844
               ||| |||||||||||||||||||
Sbjct: 6894196 ggtcctctgcaaaggctacccct 6894218



 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                           
Query: 294     agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 353
               |||||| |||||  |||||  |||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 6890394 agtgggaatcccgtccatcaagtggtgcggggccgagggtgactacaacgtgatggtcat 6890453

                                                                           
Query: 354     ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 413
               |||| |||||||||||||||| |||||||||||||||||||||||| | ||||| |||||
Sbjct: 6890454 ggagttgctggggcccagcctcgaggacctcttcaacttctgctcccgaaagtttagcct 6890513

                                              
Query: 414     caagaccgtcctgctgctcgctgaccagatg 444
               |||||| || ||||| || || |||||||||
Sbjct: 6890514 caagacggtgctgctcctggcggaccagatg 6890544



 Score =  157 bits (79), Expect = 4e-35
 Identities = 118/131 (90%)
 Strand = Plus / Plus

                                                                           
Query: 859     tacctgaacttctgccgttccctgcgctttgatgacaagcctgactactcgtacctgagg 918
               ||||| |||||||||||||| ||||| || |||||||||||||||||||| |||||| | 
Sbjct: 6895569 tacctcaacttctgccgttcactgcggttcgatgacaagcctgactactcctacctgcgc 6895628

                                                                           
Query: 919     cagctcttcaggaacctgttccaccgccagggcttctcctacgactacgtctttgactgg 978
               ||||||||| | ||||| |||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 6895629 cagctcttccgcaacctcttccaccggcagggcttctcctatgactacgtcttcgactgg 6895688

                          
Query: 979     aacatgctcaa 989
               |||||||||||
Sbjct: 6895689 aacatgctcaa 6895699



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                           
Query: 205     gaagaagttgccatcaagcttgaatgtgtcaaaactaagcaccctcagctccacatcgag 264
               ||||||||||| |||||||| || ||||| || || |||||||| ||||| |||||||||
Sbjct: 6890171 gaagaagttgctatcaagctcgagtgtgtgaagacaaagcacccccagctgcacatcgag 6890230

                                              
Query: 265     agcaaaatctacaagatgatgcagggaggag 295
               |||||  ||||||||||||||||||| ||||
Sbjct: 6890231 agcaagttctacaagatgatgcaggggggag 6890261



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                           
Query: 107     ccatggagctcagagtggggaacaggtaccggctgggccggaagatcggcagcgggtcct 166
               ||||||||||  | |||||||||| |||||| ||||||||||||||||| ||||| ||||
Sbjct: 6880901 ccatggagcttcgtgtggggaacaagtaccgcctgggccggaagatcgggagcggatcct 6880960

                            
Query: 167     tcggagacatcta 179
               | ||||| |||||
Sbjct: 6880961 ttggagatatcta 6880973


>Sscrofa_Chr02 
||          Length = 162569375

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 337      tacaacgtcatggtcatggagctgctggggcccagcctggaggacctcttcaactt 392
                ||||||| ||||||  |||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 77281803 tacaacgccatggtgctggagctgctcgggcccagcctggaggacctgttcgactt 77281748


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 58,918,953
Number of extensions: 391
Number of successful extensions: 391
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 391
Number of HSP's successfully gapped: 17
Length of query: 2888
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 2866
Effective length of database: 2,808,408,574
Effective search space: 8048898973084
Effective search space used: 8048898973084
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)