>20030531C-000394 (20030531C-000394) 20030531C-000394 CTTGCTGCCT CTTCCGGCTG CTGCGCGAGT CGCCGTCCGA CAGCTGAGCG TGAGGCGTTT CTGGGGACCC GGTCCAGACG CTGCAAACAT GACGAAGGGC CTTGTTTTAG GAATCTACAG CAAAGAAAAA GAAGATGATG CACCCCAGTT TACAAGTGCG GGAGAAAATT TTGATAAATT GGTGTCTGGA AAGCTGAGAG AAATTTTGAA CATATCCGGA CCACCCCTGA AGGCAGGCAA AACCCGAACC TTTTACGGTC TGCATGAGGA CTTCTCCAGC GTGGTGGTGG TTGGCCTCGG CAAAAAGGGA GCCGGAGTTG ATGACCAGGA GAACTGGCAC GAAGGCAAAG AAAACATCAG AGCCGCTGTC GCAGCCGGGT GCAGACAGAT TCAGGACCTG GAGATCCCGT CGGTGGAGGT GGACCCCTGC GGAGACGCCC AGGCGGCCGC GGAAGGAGCG GTGCTCGGGC TCTACGAGTA CGACGAGCTG AAGCAGAAAA AGAAGGTGGT CGTGTCGGCC AAGCTCCATG GAAGTGGGGA TCAGGAGGCC TGGCAGAGGG GCGTCCTCTT TGCTTCTGGG CAGAACCTGG CACGCCACCT GATGGAGACG CCTGCCAATG AGATGACGCC AACCAGATTT GCTGAAGTTA TTGAGAAGAA TCTCAAAAGT GCCAGCAGTA AAACAGACGT CCACATCAGA CCCAAGTCTT GGATTGAGGA ACAGGAAATG GGATCATTCC TGAGTGTGGC CAAAGGGTCC GAAGAGCCTC CAGTCTTCCT GGAAATTCAC TACAAAGGCA GCCCAGACGC AAGTGACCCA CCCCTGGTGT TTGTCGGGAA GGGAATTACC TTTGACAGTG GCGGCATCTC TATCAAGGCG TCTGCGAACA TGGACCTCAT GAGGGCGGAC ATGGGCGGAG CTGCCACCAT CTGTTCCACC ATCGTGTCTG CTGCCAAGCT CGACCTGCCC ATCAACCTCG TCGGTTTGGC CCCTCTTTGT GAAAACATGC CCAGCGGGAA GGCCAACAAG CCTGGGGATG TCGTTAGAGC CAAGAACGGG AAGACCATCC AGGTGGACAA CACCGACGCC GAGGGCAGAC TCATCCTGGC CGACGCGCTC TGCTACGCGC ACACTTTTAA CCCAAAGGTC ATCATCAATG CCGCCACCCT GACAGGTGCC ATGGATATAG CTTTGGGATC CGGTGCCACT GGGGTCTTTA CCCATTCTTC CTG
Query= 20030531C-000394 (20030531C-000394) 20030531C-000394
(1233 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
230,285 sequences; 241,976,893 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Bt#S12072720 Bos taurus leucine aminopeptidase 3 (LAP3),... 1538 0.0
Alignment gnl|UG|Ssc#S6081654 MI-P-CP1-nzb-k-06-0-UI.s1 MI-P-CP1 Sus scro... 1507 0.0
Alignment gnl|UG|Hs#S2140009 Homo sapiens leucine aminopeptidase 3 (LAP3)... 1148 0.0
Alignment gnl|UG|Mm#S9104162 Mus musculus leucine aminopeptidase 3 (Lap3)... 886 0.0
Alignment gnl|UG|Ssc#S6089325 MI-P-HO-ahw-c-04-1-UM.s1 MI-P-HO Sus scrofa... 757 0.0
Alignment gnl|UG|Hs#S11046834 Homo sapiens, clone IMAGE:5167322, mRNA /gb... 38 0.94
Alignment gnl|UG|Hs#S4623311 Homo sapiens mRNA; cDNA DKFZp313D2314 (from ... 38 0.94
Alignment gnl|UG|Hs#S4621599 Homo sapiens programmed cell death 4 (neopla... 36 3.7
Alignment gnl|UG|Hs#S2139668 Homo sapiens mitotic control protein dis3 ho... 36 3.7
Alignment gnl|UG|Hs#S2516570 601649142R2 NIH_MGC_73 Homo sapiens cDNA clo... 36 3.7
>gnl|UG|Bt#S12072720 Bos taurus leucine aminopeptidase 3 (LAP3), mRNA
/cds=(1,1542) /gb=NM_174098 /gi=27806564 /ug=Bt.7240
/len=1542
Length = 1542
Score = 1538 bits (776), Expect = 0.0
Identities = 1046/1136 (92%)
Strand = Plus / Plus
Query: 87 acatgacgaagggccttgttttaggaatctacagcaaagaaaaagaagatgatgcacccc 146
||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || |
Sbjct: 74 acatgacgaagggccttgttttaggaatctatagcaaagaaaaagaagaagatgagcctc 133
Query: 147 agtttacaagtgcgggagaaaattttgataaattggtgtctggaaagctgagagaaattt 206
||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 134 agtttacaagtgcaggagagaattttaataaattggtgtctggaaagctgagagaaattt 193
Query: 207 tgaacatatccggaccacccctgaaggcaggcaaaacccgaaccttttacggtctgcatg 266
|||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 194 tgaacatatctggaccatccctgaaggcaggcaaaacccgaaccttttatggtctacatg 253
Query: 267 aggacttctccagcgtggtggtggttggcctcggcaaaaagggagccggagttgatgacc 326
|||||||| | |||||||||||||||||||| ||||||||| || ||| ||||||| |
Sbjct: 254 aggacttccctagcgtggtggtggttggccttggcaaaaagacggctggaattgatgaac 313
Query: 327 aggagaactggcacgaaggcaaagaaaacatcagagccgctgtcgcagccgggtgcagac 386
||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 314 aggagaactggcatgaaggcaaagaaaacatcagagctgctgttgcagcggggtgcagac 373
Query: 387 agattcaggacctggagatcccgtcggtggaggtggacccctgcggagacgcccaggcgg 446
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 374 agattcaggacctggagatcccgtcggtggaggtggacccctgcggagatgcccaggcgg 433
Query: 447 ccgcggaaggagcggtgctcgggctctacgagtacgacgagctgaagcagaaaaagaagg 506
| |||||||||||||||||||||||||| || || || || ||||||||||||| |||||
Sbjct: 434 ctgcggaaggagcggtgctcgggctctatgaatatgatgacctgaagcagaaaaggaagg 493
Query: 507 tggtcgtgtcggccaagctccatggaagtggggatcaggaggcctggcagaggggcgtcc 566
|||| ||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 494 tggtggtgtcggccaaactccatggaagtgaggaccaggaggcctggcagagaggcgtcc 553
Query: 567 tctttgcttctgggcagaacctggcacgccacctgatggagacgcctgccaatgagatga 626
|||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||
Sbjct: 554 tctttgcttctgggcagaacctggcacgccgcttgatggagacgcctgccaacgagatga 613
Query: 627 cgccaaccagatttgctgaagttattgagaagaatctcaaaagtgccagcagtaaaacag 686
||||||||| |||||| ||| || ||||| |||||||||||||||| || | ||||||||
Sbjct: 614 cgccaaccaaatttgccgaaattgttgaggagaatctcaaaagtgctagtattaaaacag 673
Query: 687 acgtccacatcagacccaagtcttggattgaggaacaggaaatgggatcattcctgagtg 746
||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 674 acgtcttcatcagacccaagtcttggattgaggaacaggaaatgggatcatttctaagtg 733
Query: 747 tggccaaagggtccgaagagcctccagtcttcctggaaattcactacaaaggcagcccag 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 734 tggccaaagggtccgaagagcctccagtcttcctggaaattcactacaaaggcagtccca 793
Query: 807 acgcaagtgacccacccctggtgtttgtcgggaagggaattacctttgacagtggcggca 866
| |||||||| || ||| |||||||||| |||||||| ||||||||||||||||| ||||
Sbjct: 794 atgcaagtgaacctcccttggtgtttgttgggaaggggattacctttgacagtggtggca 853
Query: 867 tctctatcaaggcgtctgcgaacatggacctcatgagggcggacatgggcggagctgcca 926
|||| |||||||| |||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct: 854 tctccatcaaggctgctgcaaacatggacctcatgagggccgacatgggaggagctgcca 913
Query: 927 ccatctgttccaccatcgtgtctgctgccaagctcgacctgcccatcaacctcgtcggtt 986
| |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 914 ctatctgttcagccatcgtgtctgctgccaagctcgacctgcccatcaacatcgtaggtt 973
Query: 987 tggcccctctttgtgaaaacatgcccagcgggaaggccaacaagcctggggatgtcgtta 1046
|||| |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct: 974 tggctcctctttgtgaaaatatgcccagtgggaaggccaacaagcctggggatgttgtta 1033
Query: 1047 gagccaagaacgggaagaccatccaggtggacaacaccgacgccgagggcagactcatcc 1106
|||||| ||||||||||||||| |||||||| |||||||| || ||||| ||||| ||||
Sbjct: 1034 gagccaggaacgggaagaccatacaggtggataacaccgatgctgaggggagacttatcc 1093
Query: 1107 tggccgacgcgctctgctacgcgcacacttttaacccaaaggtcatcatcaatgccgcca 1166
||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 1094 tggccgatgcgctctgctacgctcacacttttaacccaaaggtcatcattaatgccgcca 1153
Query: 1167 ccctgacaggtgccatggatatagctttgggatccggtgccactggggtctttacc 1222
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 1154 ccctgacaggtgccatggacatagctttgggatctggtgccactggggtctttacc 1209
>gnl|UG|Ssc#S6081654 MI-P-CP1-nzb-k-06-0-UI.s1 MI-P-CP1 Sus scrofa
cDNA clone MI-P-CP1-nzb-k-06-0-UI 3', mRNA sequence
/clone=MI-P-CP1-nzb-k-06-0-UI /clone_end=3' /gb=BQ604338
/gi=21551064 /ug=Ssc.8775 /len=797
Length = 797
Score = 1507 bits (760), Expect = 0.0
Identities = 774/779 (99%)
Strand = Plus / Plus
Query: 443 gcggccgcggaaggagcggtgctcgggctctacgagtacgacgagctgaagcagaaaaag 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggccgcggaaggagcggtgctcgggctctacgagtacgacgagctgaagcagaaaaag 60
Query: 503 aaggtggtcgtgtcggccaagctccatggaagtggggatcaggaggcctggcagaggggc 562
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 aaggtggtcgtgtcggccaagctccacggaagtggggatcaggaggcctggcagaggggt 120
Query: 563 gtcctctttgcttctgggcagaacctggcacgccacctgatggagacgcctgccaatgag 622
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 121 gtcctctttgcttctgggcagaacctggcacgccacctgatggagacgcccgccaatgag 180
Query: 623 atgacgccaaccagatttgctgaagttattgagaagaatctcaaaagtgccagcagtaaa 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgacgccaaccagatttgctgaagttattgagaagaatctcaaaagtgccagcagtaaa 240
Query: 683 acagacgtccacatcagacccaagtcttggattgaggaacaggaaatgggatcattcctg 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acagacgtccacatcagacccaagtcttggattgaggaacaggaaatgggatcattcctg 300
Query: 743 agtgtggccaaagggtccgaagagcctccagtcttcctggaaattcactacaaaggcagc 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtgtggccaaagggtccgaagagcctccagtcttcctggaaattcactacaaaggcagc 360
Query: 803 ccagacgcaagtgacccacccctggtgtttgtcgggaagggaattacctttgacagtggc 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccagacgcaagtgacccacccctggtgtttgtcgggaagggaattacctttgacagtggc 420
Query: 863 ggcatctctatcaaggcgtctgcgaacatggacctcatgagggcggacatgggcggagct 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcatctctatcaaggcgtctgcgaacatggacctcatgagggcggacatgggcggagct 480
Query: 923 gccaccatctgttccaccatcgtgtctgctgccaagctcgacctgcccatcaacctcgtc 982
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccactatctgttccaccatcgtgtctgctgccaagctcgacctgcccatcaacctcgtc 540
Query: 983 ggtttggcccctctttgtgaaaacatgcccagcgggaaggccaacaagcctggggatgtc 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtttggcccctctttgtgaaaacatgcccagcgggaaggccaacaagcctggggatgtc 600
Query: 1043 gttagagccaagaacgggaagaccatccaggtggacaacaccgacgccgagggcagactc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttagagccaagaacgggaagaccatccaggtggacaacaccgacgccgagggcagactc 660
Query: 1103 atcctggccgacgcgctctgctacgcgcacacttttaacccaaaggtcatcatcaatgcc 1162
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 661 atcctggccgacgcgctctgctacgcgcacacttttaacccanaggtcatcatcaatgcc 720
Query: 1163 gccaccctgacaggtgccatggatatagctttgggatccggtgccactggggtctttac 1221
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccaccctgacaggtgccatggatatagctttgggatccggtgccactggggtctttac 779
>gnl|UG|Hs#S2140009 Homo sapiens leucine aminopeptidase 3 (LAP3), mRNA
/cds=(187,1746) /gb=NM_015907 /gi=7705687 /ug=Hs.182579
/len=2147
Length = 2147
Score = 1148 bits (579), Expect = 0.0
Identities = 1005/1147 (87%)
Strand = Plus / Plus
Query: 87 acatgacgaagggccttgttttaggaatctacagcaaagaaaaagaagatgatgcacccc 146
||||||||||||||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 278 acatgacgaagggccttgttttaggaatctattccaaagaaaaagaagatgatgtgccac 337
Query: 147 agtttacaagtgcgggagaaaattttgataaattggtgtctggaaagctgagagaaattt 206
|||| |||||||| ||||| ||||||||||||||| | |||||||||||||||| | ||
Sbjct: 338 agttcacaagtgcaggagagaattttgataaattgttagctggaaagctgagagagactt 397
Query: 207 tgaacatatccggaccacccctgaaggcaggcaaaacccgaaccttttacggtctgcatg 266
|||||||||| |||||||| ||||||||||| || || ||||||||||| |||||||||
Sbjct: 398 tgaacatatctggaccacctctgaaggcagggaagactcgaaccttttatggtctgcatc 457
Query: 267 aggacttctccagcgtggtggtggttggcctcggcaaaaagggagccggagttgatgacc 326
|||||||| ||||||||||| | ||||||||||||||||||| ||| ||| | || || |
Sbjct: 458 aggacttccccagcgtggtgctagttggcctcggcaaaaaggcagctggaatcgacgaac 517
Query: 327 aggagaactggcacgaaggcaaagaaaacatcagagccgctgtcgcagccgggtgcagac 386
|||| |||||||| ||||||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 518 aggaaaactggcatgaaggcaaagaaaacatcagagctgctgttgcagcggggtgcaggc 577
Query: 387 agattcaggacctggagatcccgtcggtggaggtggacccctgcggagacgcccaggcgg 446
||||||| ||||||||| || |||| ||||||||||| ||||| |||||||| ||||| |
Sbjct: 578 agattcaagacctggagctctcgtctgtggaggtggatccctgtggagacgctcaggctg 637
Query: 447 ccgcggaaggagcggtgctcgggctctacgagtacgacgagctgaagcagaaaaagaagg 506
| ||||| ||||||||||| || ||||| || ||||| || || ||||| |||||||||
Sbjct: 638 ctgcggagggagcggtgcttggtctctatgaatacgatgacctaaagcaaaaaaagaaga 697
Query: 507 tggtcgtgtcggccaagctccatggaagtggggatcaggaggcctggcagaggggcgtcc 566
||| |||||||| |||||| |||||||||||||||||||||||||||||| || ||||
Sbjct: 698 tggctgtgtcggcaaagctctatggaagtggggatcaggaggcctggcagaaaggagtcc 757
Query: 567 tctttgcttctgggcagaacctggcacgccacctgatggagacgcctgccaatgagatga 626
| |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||
Sbjct: 758 tgtttgcttctgggcagaacttggcacgccaattgatggagacgccagccaatgagatga 817
Query: 627 cgccaaccagatttgctgaagttattgagaagaatctcaaaagtgccagcagtaaaacag 686
|||||||||||||||| ||| ||||||||||||||||||||||||| || |||||||| |
Sbjct: 818 cgccaaccagatttgccgaaattattgagaagaatctcaaaagtgctagtagtaaaaccg 877
Query: 687 acgtccacatcagacccaagtcttggattgaggaacaggaaatgggatcattcctgagtg 746
| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 878 aggtccatatcagacccaagtcttggattgaggaacaggcaatgggatcattcctcagtg 937
Query: 747 tggccaaagggtccgaagagcctccagtcttcctggaaattcactacaaaggcagcccag 806
|||||||||| || || ||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 938 tggccaaaggatctgacgagcccccagtcttcttggaaattcactacaaaggcagcccca 997
Query: 807 acgcaagtgacccacccctggtgtttgtcgggaagggaattacctttgacagtggcggca 866
| |||| || ||||||||||||||||| ||||| |||||||||||||||||||| || |
Sbjct: 998 atgcaaacgaaccacccctggtgtttgttgggaaaggaattacctttgacagtggtggta 1057
Query: 867 tctctatcaaggcgtctgcgaacatggacctcatgagggcggacatgggcggagctgcca 926
|||| |||||||| ||||| || ||||||||||||||||| |||||||| |||||||| |
Sbjct: 1058 tctccatcaaggcttctgcaaatatggacctcatgagggctgacatgggaggagctgcaa 1117
Query: 927 ccatctgttccaccatcgtgtctgctgccaagctcgacctgcccatcaacctcgtcggtt 986
| || || || |||||||||||||||| ||| | | ||||||| || | | |||
Sbjct: 1118 ctatatgctcagccatcgtgtctgctgcaaagttaaatttgcccattaatattataggtc 1177
Query: 987 tggcccctctttgtgaaaacatgcccagcgggaaggccaacaagcctggggatgtcgtta 1046
||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||
Sbjct: 1178 tggcccctctttgtgaaaatatgcccagcggcaaggccaacaagccgggggatgttgtta 1237
Query: 1047 gagccaagaacgggaagaccatccaggtggacaacaccgacgccgagggcagactcatcc 1106
||||||| |||||||||||||||||||| || ||||| || || ||||| || ||||| |
Sbjct: 1238 gagccaaaaacgggaagaccatccaggttgataacactgatgctgaggggaggctcatac 1297
Query: 1107 tggccgacgcgctctgctacgcgcacacttttaacccaaaggtcatcatcaatgccgcca 1166
|||| || |||||||| ||||| ||||| |||||||| ||||||||| ||||||||||||
Sbjct: 1298 tggctgatgcgctctgttacgcacacacgtttaacccgaaggtcatcctcaatgccgcca 1357
Query: 1167 ccctgacaggtgccatggatatagctttgggatccggtgccactggggtctttacccatt 1226
|| | ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 1358 ccttaacaggtgccatggatgtagctttgggatcaggtgccactggggtctttaccaatt 1417
Query: 1227 cttcctg 1233
| |||||
Sbjct: 1418 catcctg 1424
Score = 50.1 bits (25), Expect = 2e-04
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 1 cttgctgcctcttccggctgctgcgcgagtcgccgtccgac 41
||||||||||||||||||||| | |||||| | ||||||||
Sbjct: 192 cttgctgcctcttccggctgcggggcgagtagtcgtccgac 232
>gnl|UG|Mm#S9104162 Mus musculus leucine aminopeptidase 3 (Lap3), mRNA
/cds=(48,1607) /gb=NM_024434 /gi=13277355 /ug=Mm.34832
/len=1986
Length = 1986
Score = 886 bits (447), Expect = 0.0
Identities = 972/1147 (84%)
Strand = Plus / Plus
Query: 87 acatgacgaagggccttgttttaggaatctacagcaaagaaaaagaagatgatgcacccc 146
|||||||||||||||||||||||||||| || |||||| ||||| ||||| || |
Sbjct: 139 acatgacgaagggccttgttttaggaatttatgccaaagacaaagatgatgacctgccac 198
Query: 147 agtttacaagtgcgggagaaaattttgataaattggtgtctggaaagctgagagaaattt 206
| ||||||||||||||||| | |||| |||| |||||||||||||||||||| ||||| |
Sbjct: 199 aatttacaagtgcgggagagagttttaataagttggtgtctggaaagctgagggaaatgt 258
Query: 207 tgaacatatccggaccacccctgaaggcaggcaaaacccgaaccttttacggtctgcatg 266
|||||||||| ||||| || || || |||||||||||| ||||||| || |||||||||
Sbjct: 259 tgaacatatctggacctcctctcaaagcaggcaaaaccagaaccttctatggtctgcatc 318
Query: 267 aggacttctccagcgtggtggtggttggcctcggcaaaaagggagccggagttgatgacc 326
|||||||| |||||||||||||||| ||||| ||||| || |||||||||||||
Sbjct: 319 aggacttccccagcgtggtggtggtcggccttggcaagcgatcggctggagttgatgacc 378
Query: 327 aggagaactggcacgaaggcaaagaaaacatcagagccgctgtcgcagccgggtgcagac 386
|||| |||||||||||||||||||||||||||||||| ||||| ||||| || ||||| |
Sbjct: 379 aggaaaactggcacgaaggcaaagaaaacatcagagctgctgttgcagcgggatgcaggc 438
Query: 387 agattcaggacctggagatcccgtcggtggaggtggacccctgcggagacgcccaggcgg 446
|| | || ||||||||| | ||||||||||||||||| ||||| ||||| || || || |
Sbjct: 439 aggtccaagacctggagctgccgtcggtggaggtggatccctgtggagatgcgcaagctg 498
Query: 447 ccgcggaaggagcggtgctcgggctctacgagtacgacgagctgaagcagaaaaagaagg 506
| || |||||||| ||||| || ||||| |||||||| || ||||||||||| |||||||
Sbjct: 499 ctgcagaaggagctgtgcttggtctctatgagtacgatgacctgaagcagaagaagaagg 558
Query: 507 tggtcgtgtcggccaagctccatggaagtggggatcaggaggcctggcagaggggcgtcc 566
||| |||||||| |||||||| ||||| || |||| ||||||||| ||| || ||||
Sbjct: 559 tggctgtgtcggcgaagctccacggaagcggtgatctcgaggcctgggagaaaggggtcc 618
Query: 567 tctttgcttctgggcagaacctggcacgccacctgatggagacgcctgccaatgagatga 626
||||||||||||| |||||| |||| || || ||||||||| | || |||||||||||||
Sbjct: 619 tctttgcttctggacagaacttggcccgtcatctgatggagtctccagccaatgagatga 678
Query: 627 cgccaaccagatttgctgaagttattgagaagaatctcaaaagtgccagcagtaaaacag 686
| ||||||||||| |||||| | ||||| || || |||||||||||||| ||||||||
Sbjct: 679 caccaaccagattcgctgaaatcattgaaaaaaacctcaaaagtgccagtagtaaaacca 738
Query: 687 acgtccacatcagacccaagtcttggattgaggaacaggaaatgggatcattcctgagtg 746
| ||||| |||||||||||||| ||||| |||||||| |||||||| || ||||| ||||
Sbjct: 739 aggtccatatcagacccaagtcctggatagaggaacaagaaatgggttcgttcctaagtg 798
Query: 747 tggccaaagggtccgaagagcctccagtcttcctggaaattcactacaaaggcagcccag 806
| ||||| ||||| ||||| || ||||||||| ||||||| ||||||| ||||||||
Sbjct: 799 tagccaaggggtctgaagaaccaccagtcttcttggaaatccactacatgggcagcccca 858
Query: 807 acgcaagtgacccacccctggtgtttgtcgggaagggaattacctttgacagtggcggca 866
| |||| || |||||||||||||||| |||||||| ||||||||||||||||| || |
Sbjct: 859 atgcaaccgaggcacccctggtgtttgtggggaagggcattacctttgacagtggaggta 918
Query: 867 tctctatcaaggcgtctgcgaacatggacctcatgagggcggacatgggcggagctgcca 926
|||| |||||||| ||||| |||||||||||||||||||| || ||||| ||||| || |
Sbjct: 919 tctccatcaaggcttctgcaaacatggacctcatgagggctgatatgggaggagcagcaa 978
Query: 927 ccatctgttccaccatcgtgtctgctgccaagctcgacctgcccatcaacctcgtcggtt 986
| || || || |||| |||||||| || |||||| || ||||||| ||| || | ||||
Sbjct: 979 caatatgctcggccattgtgtctgcggcaaagctcaacttgcccattaacatcattggtt 1038
Query: 987 tggcccctctttgtgaaaacatgcccagcgggaaggccaacaagcctggggatgtcgtta 1046
||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||| |
Sbjct: 1039 tggcccctctttgtgaaaatatgcctagcggcaaggccaacaagccaggggatgtcgtca 1098
Query: 1047 gagccaagaacgggaagaccatccaggtggacaacaccgacgccgagggcagactcatcc 1106
|||||| ||| ||||||||||||||||| || ||||| ||||||||||| || |||||||
Sbjct: 1099 gagccaggaatgggaagaccatccaggttgataacactgacgccgaggggaggctcatcc 1158
Query: 1107 tggccgacgcgctctgctacgcgcacacttttaacccaaaggtcatcatcaatgccgcca 1166
||||||| || ||||| || || ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 1159 tggccgatgcactctgttatgcacacacctttaatcccaaggtcatcatcaatgctgcca 1218
Query: 1167 ccctgacaggtgccatggatatagctttgggatccggtgccactggggtctttacccatt 1226
|| | ||||||||||||||| |||| |||| || ||||||||||| ||||||||| |||
Sbjct: 1219 ccttaacaggtgccatggatgtagccctggggtcaggtgccactggagtctttaccaatt 1278
Query: 1227 cttcctg 1233
| |||||
Sbjct: 1279 cgtcctg 1285
Score = 50.1 bits (25), Expect = 2e-04
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cttgctgcctcttccggctgctgcgcgagtcgc 33
||||||||| ||||||||||| |||||||||||
Sbjct: 53 cttgctgccccttccggctgccgcgcgagtcgc 85
>gnl|UG|Ssc#S6089325 MI-P-HO-ahw-c-04-1-UM.s1 MI-P-HO Sus scrofa
cDNA clone MI-P-HO-ahw-c-04-1-UM 3', mRNA sequence
/clone=MI-P-HO-ahw-c-04-1-UM /clone_end=3' /gb=BQ602184
/gi=21548910 /ug=Ssc.9076 /len=473
Length = 473
Score = 757 bits (382), Expect = 0.0
Identities = 409/414 (98%), Gaps = 3/414 (0%)
Strand = Plus / Minus
Query: 39 gacagctgagcgtgaggcgtttctggggacccggtccagacgctgcaaacatgacgaagg 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gacagctgagcgtgaggcgtttctggggacccggtccagacgctgcaaacatgacgaagg 354
Query: 99 gccttgttttaggaatctacagcaaagaaaaagaagatgatgcaccccagtttacaagtg 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gccttgttttaggaatctacagcaaagaaaaagaagatgatgcaccccagtttacaagtg 294
Query: 159 cgggagaaaattttgataaattggtgtctggaaagctgagagaaattttgaacatatccg 218
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 293 cgggagagaattttgataaattggtgtctggaaagctgagagaaatcttgaacatatccg 234
Query: 219 gaccacccctgaaggcaggcaaaacccgaaccttttacggtctgcatgaggacttctcca 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gaccacccctgaaggcaggcaaaacccgaaccttttacggtctgcatgaggacttctcca 174
Query: 279 g-cgtggtggtggttggcctcggcaaaaagggagccggagttgatgaccaggagaactgg 337
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gncgtggtggtggttggcctcggcaaaaagggagccggagttgatgaccaggagaactgg 114
Query: 338 cacgaaggcaaagaaaacatcagagccgctgtcgcagccgggtgcagacagattcaggac 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cacgaaggcaaagaaaacatcagagccgctgtcgcagccgggtgcagacagattcaggac 54
Query: 398 ctggagatcccgtcggtggaggtggacccctgcggagacgccc-aggcggccgc 450
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 53 ctggagatcccgtcggtggaggtg-acccctgcggagacgccccaggcggccgc 1
>gnl|UG|Hs#S11046834 Homo sapiens, clone IMAGE:5167322, mRNA
/gb=BC043525 /gi=27696077 /ug=Hs.370216 /len=1687
Length = 1687
Score = 38.2 bits (19), Expect = 0.94
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 117 acagcaaagaaaaagaaga 135
|||||||||||||||||||
Sbjct: 895 acagcaaagaaaaagaaga 913
>gnl|UG|Hs#S4623311 Homo sapiens mRNA; cDNA DKFZp313D2314 (from clone
DKFZp313D2314) /gb=AL832057 /gi=21732598 /ug=Hs.3685
/len=3141
Length = 3141
Score = 38.2 bits (19), Expect = 0.94
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1091 gagggcagactcatcctgg 1109
|||||||||||||||||||
Sbjct: 1565 gagggcagactcatcctgg 1547
>gnl|UG|Hs#S4621599 Homo sapiens programmed cell death 4 (neoplastic
transformation inhibitor) (PDCD4), transcript variant 2,
mRNA /cds=(361,1737) /gb=NM_145341 /gi=21735597
/ug=Hs.326248 /len=2403
Length = 2403
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 319 tgatgaccaggagaactg 336
||||||||||||||||||
Sbjct: 759 tgatgaccaggagaactg 776
>gnl|UG|Hs#S2139668 Homo sapiens mitotic control protein dis3 homolog
(DIS3), mRNA /cds=(37,2913) /gb=NM_014953 /gi=19923415
/ug=Hs.323346 /len=7320
Length = 7320
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 121 caaagaaaaagaagatga 138
||||||||||||||||||
Sbjct: 2882 caaagaaaaagaagatga 2899
>gnl|UG|Hs#S2516570 601649142R2 NIH_MGC_73 Homo sapiens cDNA clone
IMAGE:3932867 3', mRNA sequence /clone=IMAGE:3932867
/clone_end=3' /gb=BE968347 /gi=10579052 /ug=Hs.287002
/len=879
Length = 879
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 279 gcgtggtggtggttggcc 296
||||||||||||||||||
Sbjct: 470 gcgtggtggtggttggcc 487
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: May 6, 2003 5:18 PM
Number of letters in database: 241,976,893
Number of sequences in database: 230,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 179483
Number of Sequences: 230285
Number of extensions: 179483
Number of successful extensions: 13709
Number of sequences better than 10.0: 18
length of query: 1233
length of database: 241,976,893
effective HSP length: 19
effective length of query: 1214
effective length of database: 237,601,478
effective search space: 288448194292
effective search space used: 288448194292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)