>20030531C-003018 (20030531C-003018) 20030531C-003018 AGACACGCCT GCAGACATTC CCTGGGAAAG GGCAAGCAGC AGCCAGGTGT GAATGAGGCA GGATGAACTG GACAGGTCTG TACACCTTGC TCAGTGGCGT GAACCGGCAT TCTACTGCCA TTGGCCGAGT ATGGCTCTCA GTCATCTTCA TCTTCAGAAT CATGGTGCTG GTGGTGGCTG CAGAGAGTGT GTGGGGTGAT GAGAAATCTT CCTTCATCTG CAACACCCTC CAGCCTGGCT GCAACAGCGT CTGCTACGAC CACTTTTTCC CCATCTCCCA TGTGCGTCTG TGGTCTCTGC AGCTCATCTT GGTTTCCACC CCAGCTCTTC TCGTGGCCAT GCACGTGGCT CACCAGCAGC ACATAGAAAA GAAAATGCTG CGACTTGAGG GCCATGCCGA CCCCCTCCAC CTGGAGGAGG TGAAGAGGCA CAAGGTCCAC ATCTCAGGGA CGCTGTGGTG GACCTACGTC ATCAGCGTGG TCTTCCGGCT GCTGTTCGAG GCCGCCTTCA TGTACGTCTT TTATCTGCTC TACCCTGGCT ATGCCATGGT GCGGTTGGTG AAGTGTGAGG CCTACCCCTG CCCCAACACA GTGGACTGCT TTGTGTCCCG CCCCACCGAG AAGACCGTCT TCACCGTCTT CATGCTGGCC GCCTCCGGCA TCTGCATCAT CCTCAATGTG GCCGAGGTGG TGTACCTCAT CTTCCGGGCC TGCGCCCGCC GAGCCCAGCG CCGCTCCAAT CCGCCCTCCC GCAAGGGCTC GGGGGGCTTC GGCCACCGCC TCTCACCTGA ATACAAGCAG AACGAGATCA ACAAGCTGCT GAGCGAGCAG GACGGCTCCC TGAAAGACAT ACTGCGCCGC AGCCCCGGTA CCGGGGCTGG GCTGGCGGAA AAGAGCGACC GCTGCTCAGC CTGCTGATGC CACAGACCAG GCAACCTCCC ATCCTGCCCC TCCACCCTGG CCCCGGGGCT GCCCCTCCTT CTCCCCTGCC GGCTGGCTGA GCAGGCCTCT GCCTGCGAGG GATTTGCTCC ATCAAAACCC TCCTTCCCTT CTTCTAGG
Query= 20030531C-003018 (20030531C-003018) 20030531C-003018
(1058 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
230,285 sequences; 241,976,893 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Hs#S1728620 Homo sapiens gap junction protein, beta 1, 3... 1368 0.0
Alignment gnl|UG|Bt#S12072698 Bos taurus gap junction protein, beta 1, 32... 1314 0.0
Alignment gnl|UG|Mm#S8081832 Mus musculus gap junction membrane channel p... 1164 0.0
Alignment gnl|UG|Hs#S2138657 Homo sapiens gap junction protein, beta 2, 2... 90 2e-16
Alignment gnl|UG|Hs#S3437926 Homo sapiens gap junction protein, alpha 3, ... 68 9e-10
Alignment gnl|UG|Mm#S8040490 Mus musculus gap junction membrane channel p... 68 9e-10
Alignment gnl|UG|Hs#S1728695 Homo sapiens gap junction protein, alpha 4, ... 60 2e-07
Alignment gnl|UG|Mm#S8041640 Mus musculus gap junction membrane channel p... 56 3e-06
Alignment gnl|UG|Hs#S1732072 Homo sapiens gap junction protein, beta 6 (c... 52 5e-05
Alignment gnl|UG|Hs#S1692673 UI-H-BI1-aeo-a-09-0-UI.s1 NCI_CGAP_Sub3 Homo... 50 2e-04
>gnl|UG|Hs#S1728620 Homo sapiens gap junction protein, beta 1, 32kDa
(connexin 32, Charcot-Marie-Tooth neuropathy, X-linked)
(GJB1), mRNA /cds=(63,914) /gb=NM_000166 /gi=4504004
/ug=Hs.333303 /len=1558
Length = 1558
Score = 1368 bits (690), Expect = 0.0
Identities = 848/900 (94%), Gaps = 3/900 (0%)
Strand = Plus / Plus
Query: 45 aggtgtgaatgaggcaggatgaactggacaggtctgtacaccttgctcagtggcgtgaac 104
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 45 aggtgtgaatgaggcaggatgaactggacaggtttgtacaccttgctcagtggcgtgaac 104
Query: 105 cggcattctactgccattggccgagtatggctctcagtcatcttcatcttcagaatcatg 164
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 105 cggcattctactgccattggccgagtatggctctcggtcatcttcatcttcagaatcatg 164
Query: 165 gtgctggtggtggctgcagagagtgtgtggggtgatgagaaatcttccttcatctgcaac 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gtgctggtggtggctgcagagagtgtgtggggtgatgagaaatcttccttcatctgcaac 224
Query: 225 accctccagcctggctgcaacagcgtctgctacgaccactttttccccatctcccatgtg 284
|| ||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||
Sbjct: 225 acactccagcctggctgcaacagcgtttgctatgaccaattcttccccatctcccatgtg 284
Query: 285 cgtctgtggtctctgcagctcatcttggtttccaccccagctcttctcgtggccatgcac 344
|| |||||||| |||||||||||| | ||||||||||||||||| |||||||||||||||
Sbjct: 285 cggctgtggtccctgcagctcatcctagtttccaccccagctctcctcgtggccatgcac 344
Query: 345 gtggctcaccagcagcacatagaaaagaaaatgctgcgacttgagggccatgccgacccc 404
|||||||||||||| |||||||| ||||||||||| || ||||||||||||| ||||||
Sbjct: 345 gtggctcaccagcaacacatagagaagaaaatgctacggcttgagggccatggggacccc 404
Query: 405 ctccacctggaggaggtgaagaggcacaaggtccacatctcagggacgctgtggtggacc 464
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 405 ctacacctggaggaggtgaagaggcacaaggtccacatctcagggacactgtggtggacc 464
Query: 465 tacgtcatcagcgtggtcttccggctgctgttcgaggccgccttcatgtacgtcttttat 524
|| |||||||||||||| ||||||||| |||| ||||||| ||||||||| |||||||||
Sbjct: 465 tatgtcatcagcgtggtgttccggctgttgtttgaggccgtcttcatgtatgtcttttat 524
Query: 525 ctgctctaccctggctatgccatggtgcggttggtgaagtgtgaggcctacccctgcccc 584
|||||||||||||||||||||||||||||| |||| ||||| || | |||||||||||||
Sbjct: 525 ctgctctaccctggctatgccatggtgcggctggtcaagtgcgacgtctacccctgcccc 584
Query: 585 aacacagtggactgctttgtgtcccgccccaccgagaagaccgtcttcaccgtcttcatg 644
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 585 aacacagtggactgcttcgtgtcccgccccaccgagaaaaccgtcttcaccgtcttcatg 644
Query: 645 ctggccgcctccggcatctgcatcatcctcaatgtggccgaggtggtgtacctcatcttc 704
|| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 645 ctagctgcctctggcatctgcatcatcctcaatgtggccgaggtggtgtacctcatcatc 704
Query: 705 cgggcctgcgcccgccgagcccagcgccgctccaatccgccctcccgcaagggctcgggg 764
|||||||| ||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 705 cgggcctgtgcccgccgagcccagcgccgctccaatccaccttcccgcaagggctc---g 761
Query: 765 ggcttcggccaccgcctctcacctgaatacaagcagaacgagatcaacaagctgctgagc 824
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 762 ggcttcggccaccgcctctcacctgaatacaagcagaatgagatcaacaagctgctgagt 821
Query: 825 gagcaggacggctccctgaaagacatactgcgccgcagccccggtaccggggctgggctg 884
|||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 822 gagcaggatggctccctgaaagacatactgcgccgcagccctggcaccggggctgggctg 881
Query: 885 gcggaaaagagcgaccgctgctcagcctgctgatgccacagaccaggcaacctcccatcc 944
|| |||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||
Sbjct: 882 gctgaaaagagcgaccgctgctcggcctgctgatgccacataccaggcaacctgccatcc 941
Score = 40.1 bits (20), Expect = 0.20
Identities = 63/76 (82%), Gaps = 6/76 (7%)
Strand = Plus / Plus
Query: 974 cctccttctcccctgccggctggctgagcaggcctctgcctgcgagggatttgctccatc 1033
||||||||||||||||||| || ||||||||||||||| |||| || ||| |||
Sbjct: 971 cctccttctcccctgccgg-----tgcacaggcctctgcctgctgggga-ttactcgatc 1024
Query: 1034 aaaaccctccttccct 1049
|||||| |||||||||
Sbjct: 1025 aaaaccttccttccct 1040
Score = 36.2 bits (18), Expect = 3.2
Identities = 28/30 (93%), Gaps = 1/30 (3%)
Strand = Plus / Plus
Query: 22 ctgggaaagggcaagcagcagccaggtgtg 51
|||||||||||| ||||| |||||||||||
Sbjct: 4 ctgggaaagggc-agcaggagccaggtgtg 32
>gnl|UG|Bt#S12072698 Bos taurus gap junction protein, beta 1, 32 kD
[connexin 32] (GJB1), mRNA /cds=(1,855) /gb=NM_174069
/gi=27806608 /ug=Bt.516 /len=855
Length = 855
Score = 1314 bits (663), Expect = 0.0
Identities = 807/855 (94%)
Strand = Plus / Plus
Query: 63 atgaactggacaggtctgtacaccttgctcagtggcgtgaaccggcattctactgccatt 122
||||| ||||| ||| |||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1 atgaattggacgggtttgtacaccttgctcagcggcgtgaatcggcattctactgccatt 60
Query: 123 ggccgagtatggctctcagtcatcttcatcttcagaatcatggtgctggtggtggctgca 182
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggccgagtatggctctctgtcatcttcatcttcagaatcatggtgctggtggtggctgcc 120
Query: 183 gagagtgtgtggggtgatgagaaatcttccttcatctgcaacaccctccagcctggctgc 242
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagagcgtgtggggtgatgagaagtcttccttcatctgcaacaccctccagcctggctgc 180
Query: 243 aacagcgtctgctacgaccactttttccccatctcccatgtgcgtctgtggtctctgcag 302
|| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 aatagtgtctgctacgaccactttttccccatttcccatgtgcgtctgtggtctctgcag 240
Query: 303 ctcatcttggtttccaccccagctcttctcgtggccatgcacgtggctcaccagcagcac 362
||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 241 ctcatcttggtgtccaccccagctctcctcgtggccatgcacgtggcacaccagcagcac 300
Query: 363 atagaaaagaaaatgctgcgacttgagggccatgccgaccccctccacctggaggaggtg 422
|| |||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 301 attgaaaagaaaatgcttcgacttgagggccacggcgaccccctgcacctggaggaggtg 360
Query: 423 aagaggcacaaggtccacatctcagggacgctgtggtggacctacgtcatcagcgtggtc 482
||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 361 aagaggcacaaggtccacatctcagggacactgtggtggacctatgtgatcagcgtggtc 420
Query: 483 ttccggctgctgttcgaggccgccttcatgtacgtcttttatctgctctaccctggctat 542
||||||||| |||||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 421 ttccggctgttgttcgaggctgctttcatgtatgtcttttatctgctctaccctggctac 480
Query: 543 gccatggtgcggttggtgaagtgtgaggcctacccctgccccaacacagtggactgcttt 602
|||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 481 gccatggtgcggctggtcaagtgtgatgcctacccctgccccaacacagtggactgcttc 540
Query: 603 gtgtcccgccccaccgagaagaccgtcttcaccgtcttcatgctggccgcctccggcatc 662
|||||||||||||| ||||| ||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 541 gtgtcccgccccacagagaaaaccatcttcacggtcttcatgctggccgcctcaggcatc 600
Query: 663 tgcatcatcctcaatgtggccgaggtggtgtacctcatcttccgggcctgcgcccgccga 722
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 601 tgcatcatcctcaatgtggccgaggtggtgtacctcatcttccgggcctgtgcccgccga 660
Query: 723 gcccagcgccgctccaatccgccctcccgcaagggctcggggggcttcggccaccgcctc 782
|||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct: 661 gcccagcgccgctccaatccaccctcccgcaagggctcagggggcttcggccatcgcctc 720
Query: 783 tcacctgaatacaagcagaacgagatcaacaagctgctgagcgagcaggacggctccctg 842
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 721 tcacctgaatacaagcagaatgagatcaacaagctgctgagtgagcaggacggctccctg 780
Query: 843 aaagacatactgcgccgcagccccggtaccggggctgggctggcggaaaagagcgaccgc 902
|||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||||
Sbjct: 781 aaagacatactgcgccgcagccccggcaccggggctgggctggctgagaagagtgaccgc 840
Query: 903 tgctcagcctgctga 917
||||| |||||||||
Sbjct: 841 tgctcggcctgctga 855
>gnl|UG|Mm#S8081832 Mus musculus gap junction membrane channel
protein beta 1 (Gjb1), mRNA /cds=(40,891) /gb=NM_008124
/gi=22165405 /ug=Mm.21198 /len=1519
Length = 1519
Score = 1164 bits (587), Expect = 0.0
Identities = 830/909 (91%), Gaps = 4/909 (0%)
Strand = Plus / Plus
Query: 45 aggtgtgaatgaggcaggatgaactggacaggtctgtacaccttgctcagtggcgtgaac 104
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 22 aggtgtgaatgaggcaggatgaactggacaggtctatacaccttgctcagtggcgtgaat 81
Query: 105 cggcattctactgccattggccgagtatggctctcagtcatcttcatcttcagaatcatg 164
||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 82 cggcactctacagccattggccgagtatggctgtctgtcatcttcatcttcagaatcatg 141
Query: 165 gtgctggtggtggctgcagagagtgtgtggggtgatgagaaatcttccttcatctgcaac 224
||||||||||||||||| ||||| |||||||| |||||||| || || |||||||| |||
Sbjct: 142 gtgctggtggtggctgctgagagcgtgtggggggatgagaagtcctctttcatctgtaac 201
Query: 225 accctccagcctggctgcaacagcgtctgctacgaccactttttccccatctcccatgtg 284
||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 202 accctccagccgggctgcaacagcgtctgctatgaccattttttccccatctcccacgtg 261
Query: 285 cgtctgtggtctctgcagctcatcttggtttccaccccagctcttctcgtggccatgcac 344
|| || ||||| |||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 262 cgcctatggtccctgcagcttatcttggtttccaccccagctctcctcgtggcaatgcac 321
Query: 345 gtggctcaccagcagcacatagaaaagaaaatgctgcgacttgagggccatgccgacccc 404
|| |||||||| ||||||||||||||||||||||| || |||||||| |||| ||||||
Sbjct: 322 gtagctcaccaacagcacatagaaaagaaaatgctacggcttgaggggcatggggacccc 381
Query: 405 ctccacctggaggaggtgaagaggcacaaggtccacatctcagggacgctgtggtggacc 464
|| |||||||| ||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 382 cttcacctggaagaggtaaagagacacaaggtgcacatctcagggacactgtggtggacc 441
Query: 465 tacgtcatcagcgtggtcttccggctgctgttcgaggccgccttcatgtacgtcttttat 524
|| |||||||| ||||| |||||||||||||||||||| | ||||||||| ||||| |||
Sbjct: 442 tatgtcatcagtgtggtgttccggctgctgttcgaggctgtcttcatgtatgtcttctat 501
Query: 525 ctgctctaccctggctatgccatggtgcggttggtgaagtgtgaggcctacccctgcccc 584
||||||||||| |||||||||||||||||| |||| |||||||| |||| ||||||||||
Sbjct: 502 ctgctctaccccggctatgccatggtgcggctggtcaagtgtgaagccttcccctgcccc 561
Query: 585 aacacagtggactgctttgtgtcccgccccaccgagaagaccgtcttcaccgtcttcatg 644
||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 562 aacacagtggactgcttcgtgtcccgccccaccgagaaaaccgtcttcactgtctttatg 621
Query: 645 ctggccgcctccggcatctgcatcatcctcaatgtggccgaggtggtgtacctcatcttc 704
|| || ||||||||||||||||| |||||||| ||||| |||||||||||||||||| ||
Sbjct: 622 ctcgcagcctccggcatctgcattatcctcaacgtggcggaggtggtgtacctcatcatc 681
Query: 705 cgggcctgcgcccgccgagcccagcgccgctccaatccgccctcccgcaagggctcgggg 764
|||||||| |||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 682 cgggcctgtgcccgccgtgctcagcgccgctccaatccgccctcccgcaagggctc---g 738
Query: 765 ggcttcggccaccgcctctcacctgaatacaagcagaacgagatcaacaagctgctgagc 824
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 739 ggcttcggccaccgcctctcacctgaatacaagcagaatgagatcaacaagctgctgagc 798
Query: 825 gagcaggacggctccctgaaagacatactgcgccgcagccccggtaccggggctgggctg 884
|||||||| ||||| |||||||||||||||||||||||||| || || ||||| |||||
Sbjct: 799 gagcaggatggctctctgaaagacatactgcgccgcagccctggcacaggggccgggctc 858
Query: 885 gcggaaaagagcgaccgctgctcagcctgctgatgccacagaccaggcaacctcccatcc 944
|| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 859 gctgaaaagagcgaccgatgctcagcctgctgatgcca-gtaccaggcaacctcccatcc 917
Query: 945 tgcccctcc 953
|||||||
Sbjct: 918 cacccctcc 926
>gnl|UG|Hs#S2138657 Homo sapiens gap junction protein, beta 2, 26kDa
(connexin 26) (GJB2), mRNA /cds=(1,681) /gb=NM_004004
/gi=6980947 /ug=Hs.323733 /len=681
Length = 681
Score = 89.7 bits (45), Expect = 2e-16
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 217 tctgcaacaccctccagcctggctgcaacagcgtctgctacgaccactttttccccatct 276
||||||||||||| ||||| |||||||| | ||| |||||||| |||| ||||||||||
Sbjct: 155 tctgcaacaccctgcagccaggctgcaagaacgtgtgctacgatcactacttccccatct 214
Query: 277 cccatgtgcgtctgtggtctctgcagctcatcttggtttccaccccagctcttctcgtgg 336
|||| | || || ||| | |||||||| ||||| || |||| |||||| || || ||||
Sbjct: 215 cccacatccggctatgggccctgcagctgatcttcgtgtccagcccagcgctcctagtgg 274
Query: 337 ccatgcacgtggc 349
|||||||||||||
Sbjct: 275 ccatgcacgtggc 287
Score = 77.8 bits (39), Expect = 9e-13
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 582 cccaacacagtggactgctttgtgtcccgccccaccgagaagaccgtcttcaccgtcttc 641
|||||||| |||||||||||||||||||| ||||| |||||||| |||||||| || |||
Sbjct: 523 cccaacactgtggactgctttgtgtcccggcccacggagaagactgtcttcacagtgttc 582
Query: 642 atg 644
|||
Sbjct: 583 atg 585
>gnl|UG|Hs#S3437926 Homo sapiens gap junction protein, alpha 3,
46kDa (connexin 46) (GJA3), mRNA /cds=(1,1308)
/gb=NM_021954 /gi=22779876 /ug=Hs.283746 /len=1308
Length = 1308
Score = 67.9 bits (34), Expect = 9e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 576 ccctgccccaacacagtggactgctttgtgtcccgccccaccgagaagaccgtcttcacc 635
|||||||||||||| ||||||||||| | ||| | ||||| ||||||||| |||||| |
Sbjct: 553 ccctgccccaacacggtggactgcttcatctccaggcccacggagaagaccatcttcatc 612
Query: 636 gtcttcatgctggc 649
|||||||||||||
Sbjct: 613 atcttcatgctggc 626
Score = 42.1 bits (21), Expect = 0.052
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 212 cttcatctgcaacaccctccagcctggctgcaacagcgtctgctacgac 260
||||| ||||||||||| ||||| |||||| | | |||||||||||||
Sbjct: 153 cttcacctgcaacacccagcagccgggctgcgagaacgtctgctacgac 201
>gnl|UG|Mm#S8040490 Mus musculus gap junction membrane channel
protein beta 2 (Gjb2), mRNA /cds=(1,681) /gb=NM_008125
/gi=6680010 /ug=Mm.34118 /len=681
Length = 681
Score = 67.9 bits (34), Expect = 9e-10
Identities = 154/194 (79%)
Strand = Plus / Plus
Query: 132 tggctctcagtcatcttcatcttcagaatcatggtgctggtggtggctgcagagagtgtg 191
|||||| | ||| ||||||||||| | |||||| | || |||||||||||| || |||
Sbjct: 70 tggctcacggtcctcttcatcttccgcatcatgatcctcgtggtggctgcaaaggaggtg 129
Query: 192 tggggtgatgagaaatcttccttcatctgcaacaccctccagcctggctgcaacagcgtc 251
||||| |||||| || | || |||||||||| ||||||||||||||||| | ||
Sbjct: 130 tggggagatgagcaagccgattttgtctgcaacacgctccagcctggctgcaagaatgta 189
Query: 252 tgctacgaccactttttccccatctcccatgtgcgtctgtggtctctgcagctcatcttg 311
|||||||||||| ||||||||||| || | || || ||| |||||||||| ||| ||
Sbjct: 190 tgctacgaccaccacttccccatctctcacatccggctctgggctctgcagctgatcatg 249
Query: 312 gtttccaccccagc 325
|| ||||| |||||
Sbjct: 250 gtgtccacgccagc 263
Score = 52.0 bits (26), Expect = 5e-05
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 576 ccctgccccaacacagtggactgctttgtgtcccgccccaccgagaagaccgtcttcacc 635
||||||||||| |||||||||||||| | ||| | ||||| || ||||| |||||||||
Sbjct: 517 ccctgccccaatacagtggactgcttcatttccaggcccacagaaaagactgtcttcacc 576
Query: 636 gt 637
||
Sbjct: 577 gt 578
Score = 38.2 bits (19), Expect = 0.81
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 501 gccgccttcatgtacgtctttta 523
|||| ||||||||||||||||||
Sbjct: 442 gccgtcttcatgtacgtctttta 464
>gnl|UG|Hs#S1728695 Homo sapiens gap junction protein, alpha 4,
37kDa (connexin 37) (GJA4), mRNA /cds=(65,1066)
/gb=NM_002060 /gi=4504002 /ug=Hs.296310 /len=1601
Length = 1601
Score = 60.0 bits (30), Expect = 2e-07
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 591 gtggactgctttgtgtcccgccccaccgagaagaccgtcttcaccgtcttcatg 644
|||||||||||||| || |||||||| ||||||||| |||||| | ||||||||
Sbjct: 650 gtggactgctttgtctctcgccccacggagaagaccatcttcatcatcttcatg 703
Score = 38.2 bits (19), Expect = 0.81
Identities = 43/51 (84%)
Strand = Plus / Plus
Query: 230 ccagcctggctgcaacagcgtctgctacgaccactttttccccatctccca 280
|||||| ||||||| || ||||||||| ||||| ||||||||||||||
Sbjct: 235 ccagccaggctgcaccaacgtctgctatgaccaggccttccccatctccca 285
>gnl|UG|Mm#S8041640 Mus musculus gap junction membrane channel
protein alpha 10 (Gja10), mRNA /cds=(1,1518)
/gb=NM_010289 /gi=6753989 /ug=Mm.46815 /len=1518
Length = 1518
Score = 56.0 bits (28), Expect = 3e-06
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 575 cccctgccccaacacagtggactgctttgtgtcccgccccaccgagaagacc 626
|||||||||||| |||||||||||||||| ||| | ||||| |||||||||
Sbjct: 576 cccctgccccaattcagtggactgctttgtttccaggcccacagagaagacc 627
>gnl|UG|Hs#S1732072 Homo sapiens gap junction protein, beta 6
(connexin 30) (GJB6), mRNA /cds=(1,786) /gb=NM_006783
/gi=5803020 /ug=Hs.48956 /len=786
Length = 786
Score = 52.0 bits (26), Expect = 5e-05
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 252 tgctacgaccactttttccccatctcccatgtgcgtctgtggtctctgcagctcatcttg 311
||||| |||||||||||||| | ||||| | || |||||| | || ||||| |||||
Sbjct: 190 tgctatgaccactttttcccggtgtcccacatccggctgtgggccctccagctgatcttc 249
Query: 312 gtttccaccccagctcttctcgtggccatgcacgtggc 349
|| ||||||||||| || || ||||||||||| |||||
Sbjct: 250 gtctccaccccagcgctgctggtggccatgcatgtggc 287
>gnl|UG|Hs#S1692673 UI-H-BI1-aeo-a-09-0-UI.s1 NCI_CGAP_Sub3 Homo
sapiens cDNA clone IMAGE:2719792 3', mRNA sequence
/clone=IMAGE:2719792 /clone_end=3' /gb=AW205164
/gi=6504636 /ug=Hs.415770 /len=427
Length = 427
Score = 50.1 bits (25), Expect = 2e-04
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 218 ctgcaacaccctccagcctggctgcaacagcgtctgctacgaccactttttccccatctc 277
|||||||||| ||||| ||||||| || ||||||||||||| ||| |||||||||||
Sbjct: 302 ctgcaacaccaagcagcccggctgcaccaacgtctgctacgacaactacttccccatctc 243
Query: 278 c 278
|
Sbjct: 242 c 242
Score = 42.1 bits (21), Expect = 0.052
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 171 gtggtggctgcagagagtgtgtggggtgatgag 203
||||||||||||||| | |||||||| ||||||
Sbjct: 349 gtggtggctgcagagcgcgtgtggggggatgag 317
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: May 6, 2003 5:18 PM
Number of letters in database: 241,976,893
Number of sequences in database: 230,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 198699
Number of Sequences: 230285
Number of extensions: 198699
Number of successful extensions: 16674
Number of sequences better than 10.0: 67
length of query: 1058
length of database: 241,976,893
effective HSP length: 19
effective length of query: 1039
effective length of database: 237,601,478
effective search space: 246867935642
effective search space used: 246867935642
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)