>20030531C-003125 (20030531C-003125) 20030531C-003125 GGCGTTTTCC AGCGTTGGGT TTGCGGAGAG ACACAGCCAC ACCAAGAAGG ACGCTTGTCA GACCCTCAGA TGGGACAGAG GTGACTCGGC GCTCCCGGGA GAGGTTGCAC GGCCGCTCCC CGTCCCGTCC CTGCGGGATC CAGAGTACAG AAAAGTTTTT GTTTGCGTGT GCCACCCCCA GAGAGCTAAG ACGCTCGCAC CCTGTGCATG CAAAACAGTC TTGGCTTCTG ACGTGCTGTG TGTAGCCGCT GCTTGTGTGA ATCATCAGCC CTTTGCTTGG GCACAAGGTG AAGGATGTCC CAGTGGTATG AGCTTCAGCA GCTTGACTCC AAATTCCTGG AGCAGGTTCA TCAGCTCTAC GATGACAGTT TTCCCATGGA AATCAGACAA TATCTGGCAC AGTGGCTAGA AAATCAGGAC TGGGAGCACG CTGCCAATGA TGTTTCGTTT GCCACCATCC GTTTTCATGA CCTTCTGTCG CAGCTGGATG ATCAGTACAG TCGATTTTCC TTGGAGAATA ATTTTTTGTT GCAGCATAAC ATTAGGAAAA GCAAGCGTAA CCTTCAGGAT AATTTTCAAG AAGACCCAAT ACAGATGTCT ATGATCATCT GTAACTGTCT GAAGGAGGAA AGAAAGATCT TGGAAAATGC CCAGAGATTC AATCAGACTC AGTCAGGGAA TATTCAGAGC ACTGTGATGT TAGACAAAGT TATGTGTATA GAGCATGAAA TCAAGACCCT AGAAGATCTA CAAGATGAAT ATGACTTTAA ATGCAAAACC TTGCAGAATA GAGAACATGA TACCAATGGT GTGGCAAAGA ACGATCAGAA ACAGGAACAG ATGTTACTCC AAAAGATGTA TTTAATGCTT GACAACAAGA GAAAGGAAGT AGTTAACAAA ATAATAGAGT TATTGAATGT CACCGAACTT ACCCAGAAAG CCCTGATTAA TGATGAACTG GTGGAATGGA AGCGGAGACA GCAGAGTGCC TGTATCGGGG GACCCCCCAA CGCTTGCCTC GATCAGCTGC AGAACTGGTT CACCATAGTT GCAGAAAGTC TGCAGCAGGT TCGTCAGCAG CTTAAAAAGC TTGAGGAATT GGAACAGAAA TACACCTATG AACATGACCC TATCACAAAA AACAAACAAG CGTTGTGGGA CCGCACCTTC AGCCTCTTCC AGCAGCTCAT TCAGAGCTCA TTTGTGGTGG AAAGACAGCC CTGCATGCCA ACTCATCCTC AGAGGCCATT GGTCCTGAAG ACTGGAGTAC AATTTACTGT GAAGTTGAGA CTGTTGGTGA AGTTGCAGGA GCTGAATTAT AATTTGAAAG TCAAAGTCTT ATTTGATAAA GATGTGAGTG AAAGAAATAC AGTAAAAGGG TTTAGAAAGT TCAACATTTT GGGCACTCAC ACGAAGGTGA TGAACATGGA GGAGTCCACC AATGGGAGTC TGGCGGCAGA ATTCCGACAC CTGCAACTGA AAGAACAGAA AAATGCCGGC GCCAGAACCA ACGAGGGTCC TCTCATCGTT ACTGAAGAGC TTCATTCCCT TAGTTTTGAA ACCCAATTGT GCCAGCCTGG CTTGGTCATT GACCTTGAGA CCACCTCTCT GCCCGTCGTG GTGATCTCCA ACGTCAGCCA GCTCCCGAGC GGTTGGGCCT CCATCCTGTG GTACAACATG CTGGTGGCAG AACCCAGGAA TCTGTCCTTC TTCCTGAACC CACCTTGTGC ACGATGGTCT CAGCTTTCAG AGGTGCTGAG TTGGCAGTTT TCTTCTGTCA CCAAAAGAGG TCTCAATGTG GACCAGCTGA ACATGCTGGG AGAGAAACTT CTTGGTCCCA CTGCTGGCCC TGACGGTCTT ATTCCCTGGA CGAGGTTCTG TAAGGAAAAC ATAAATGACA AAAATTTTCC TTTCTGGCTT TGGATTGAAA GTATCCTTGA ACTCATTAAG AAACACCTGC TCTCTCTCTG GAATGATGGG TGTATTGTGG GCTTTATCAG CAAGGAGCGA GAGCGGGCTC TGCTAAAGGA CCAGCAGCCG GGGACGTTCC TGTTGCGGTT CAGTGAGAGC TGCCGGGAAG GGGCCATCAC GTTCACGTGG GTGGAGCGGT CCCAGAACGG AGGCGAACCT TACTTCCATG CAGTTGAACC TTACACGAAG AAAGAACTCT CTGCTGTTAC CTTCCCTGAC ATTATTCGCA ATTATAAAGT CATGGCCGCT GAAAATATTC CAGAGAATCC CCTGAAATAT CTGTATCCAA ATATTGATAA AGACCATGCT TTTGGAAAGT ACTACTCCAG GCCAAAGGAA GCCCCAGAAC CTATGGAACT TGACGGCCCT AAAGGAACAG GATACATCAA GACTGAATTG ATTTCTGTGT CTGAAGTTCA CCCTTCTCGA CTTCAGACCA CAGACAACCT TCTTCCCATG TCTCCTGAGG AGTTTGACGA GGTGTCTCGA ATGGTGGGCC CTGTAGAATT TGACATGATG AATGCAGTAT AGAGCATGAA TTTTTCTCAT CTTCTCTGGC GACAGTTTCC CTTTCCACCT GTGATTTCCT CCTGTGCTCT GTTCCTTCAC ATTCTGTGTT TCTAGGAAAA TGAAAGAAAG GCCAGCAAAT TCGCTGCACC CTGTTGATAG CAAGTGGATT TTTCCCTAAT TCAGAAACAT CTGTCACTCT GAAGGGCTTC ATGCATCTTT ACTGAAGTAA AATTGAA
Query= 20030531C-003125 (20030531C-003125) 20030531C-003125
(2717 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
230,285 sequences; 241,976,893 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Hs#S1732115 Homo sapiens signal transducer and activator... 2652 0.0
Alignment gnl|UG|Mm#S8039615 Mus musculus signal transducer and activator... 987 0.0
Alignment gnl|UG|Bt#S11964615 BP250019B10B12 Soares normalized bovine pla... 672 0.0
Alignment gnl|UG|Ssc#S6077542 MI-P-CP0-nvi-c-02-0-UI.s1 MI-P-CP0 Sus scro... 285 5e-75
Alignment gnl|UG|Mm#S8042417 Mus musculus signal transducer and activator... 54 4e-05
Alignment gnl|UG|Hs#S4554147 Homo sapiens signal transducer and activator... 52 1e-04
Alignment gnl|UG|Hs#S1727943 Homo sapiens signal transducer and activator... 50 5e-04
Alignment gnl|UG|Bt#S14852023 616392 MARC 6BOV Bos taurus cDNA 5', mRNA s... 50 5e-04
Alignment gnl|UG|Mm#S9743723 Mus musculus signal transducer and activator... 48 0.002
Alignment gnl|UG|Hs#S4611446 AGENCOURT_8217750 Lupski_sympathetic_trunk H... 46 0.009
>gnl|UG|Hs#S1732115 Homo sapiens signal transducer and activator of
transcription 1, 91kDa (STAT1), transcript variant alpha,
mRNA /cds=(352,2604) /gb=NM_007315 /gi=21536299
/ug=Hs.21486 /len=4157
Length = 4157
Score = 2652 bits (1338), Expect = 0.0
Identities = 1853/2020 (91%), Gaps = 6/2020 (0%)
Strand = Plus / Plus
Query: 703 gacaaagttatgtgtatagagcatgaaatcaagaccctagaagatctacaagatgaatat 762
||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||||||
Sbjct: 802 gacaaggttatgtgtatagagcatgaaatcaagagcctggaagatttacaagatgaatat 861
Query: 763 gactttaaatgcaaaaccttgcagaatagagaacatgataccaatggtgtggcaaagaac 822
||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||
Sbjct: 862 gacttcaaatgcaaaaccttgcagaacagagaacacgagaccaatggtgtggcaaagagt 921
Query: 823 gatcagaaacaggaacagatgttactccaaaagatgtatttaatgcttgacaacaagaga 882
||||||||||| |||||| |||||||| | ||||||||||||||||||||||| ||||||
Sbjct: 922 gatcagaaacaagaacagctgttactcaagaagatgtatttaatgcttgacaataagaga 981
Query: 883 aaggaagtagttaacaaaataatagagttattgaatgtcaccgaacttacccagaaagcc 942
|||||||||||| |||||||||||||||| |||||||||| |||||||||||||| |||
Sbjct: 982 aaggaagtagttcacaaaataatagagttgctgaatgtcactgaacttacccagaatgcc 1041
Query: 943 ctgattaatgatgaactggtggaatggaagcggagacagcagagtgcctgtatcggggga 1002
||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 1042 ctgattaatgatgaactagtggagtggaagcggagacagcagagcgcctgtattgggggg 1101
Query: 1003 ccccccaacgcttgcctcgatcagctgcagaactggttcaccatagttgcagaaagtctg 1062
|| ||||| |||||| | ||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 1102 ccgcccaatgcttgcttggatcagctgcagaactggttcactatagttgcggagagtctg 1161
Query: 1063 cagcaggttcgtcagcagcttaaaaagcttgaggaattggaacagaaatacacctatgaa 1122
||||| ||||| ||||||||||||||| | |||||||||||||||||||||||||| |||
Sbjct: 1162 cagcaagttcggcagcagcttaaaaagttggaggaattggaacagaaatacacctacgaa 1221
Query: 1123 catgaccctatcacaaaaaacaaacaagcgttgtgggaccgcaccttcagcctcttccag 1182
|||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||
Sbjct: 1222 catgaccctatcacaaaaaacaaacaagtgttatgggaccgcaccttcagtcttttccag 1281
Query: 1183 cagctcattcagagctcatttgtggtggaaagacagccctgcatgccaactcatcctcag 1242
||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct: 1282 cagctcattcagagctcgtttgtggtggaaagacagccctgcatgccaacgcaccctcag 1341
Query: 1243 aggccattggtcctgaagactggagtacaatttactgtgaagttgagactgttggtgaag 1302
||||| ||||| ||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 1342 aggccgctggtcttgaagacaggggtccagttcactgtgaagttgagactgttggtgaaa 1401
Query: 1303 ttgcaggagctgaattataatttgaaagtcaaagtcttatttgataaagatgtgagtgaa 1362
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1402 ttgcaagagctgaattataatttgaaagtcaaagtcttatttgataaagatgtgaatgag 1461
Query: 1363 agaaatacagtaaaagggtttagaaagttcaacattttgggcactcacacgaaggtgatg 1422
||||||||||||||||| ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 1462 agaaatacagtaaaaggatttaggaagttcaacattttgggcacgcacacaaaagtgatg 1521
Query: 1423 aacatggaggagtccaccaatgggagtctggcggcagaattccgacacctgcaactgaaa 1482
||||||||||||||||||||||| ||||||||||| ||||| || ||||||||| |||||
Sbjct: 1522 aacatggaggagtccaccaatggcagtctggcggctgaatttcggcacctgcaattgaaa 1581
Query: 1483 gaacagaaaaatgccggcgccagaaccaacgagggtcctctcatcgttactgaagagctt 1542
|||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1582 gaacagaaaaatgctggcaccagaacgaatgagggtcctctcatcgttactgaagagctt 1641
Query: 1543 cattcccttagttttgaaacccaattgtgccagcctggcttggtcattgaccttgagacc 1602
|| ||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct: 1642 cactcccttagttttgaaacccaattgtgccagcctggtttggtaattgacctcgagacg 1701
Query: 1603 acctctctgcccgtcgtggtgatctccaacgtcagccagctcccgagcggttgggcctcc 1662
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 acctctctgcccgttgtggtgatctccaacgtcagccagctcccgagcggttgggcctcc 1761
Query: 1663 atcctgtggtacaacatgctggtggcagaacccaggaatctgtccttcttcctgaaccca 1722
||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 1762 atcctttggtacaacatgctggtggcggaacccaggaatctgtccttcttcctgactcca 1821
Query: 1723 ccttgtgcacgatggtctcagctttcagaggtgctgagttggcagttttcttctgtcacc 1782
|| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1822 ccatgtgcacgatgggctcagctttcagaagtgctgagttggcagttttcttctgtcacc 1881
Query: 1783 aaaagaggtctcaatgtggaccagctgaacatgctgggagagaaacttcttggtcccact 1842
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
Sbjct: 1882 aaaagaggtctcaatgtggaccagctgaacatgttgggagagaagcttcttggtcctaac 1941
Query: 1843 gctggccctgacggtcttattccctggacgaggttctgtaaggaaaacataaatgacaaa 1902
|| |||| || ||||| ||||| ||||||||||| ||||||||||| |||||||| |||
Sbjct: 1942 gccagccccgatggtctcattccgtggacgaggttttgtaaggaaaatataaatgataaa 2001
Query: 1903 aattttcctttctggctttggattgaaagtatccttgaactcattaagaaacacctgctc 1962
|||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 2002 aattttcccttctggctttggattgaaagcatcctagaactcattaaaaaacacctgctc 2061
Query: 1963 tctctctggaatgatgggtgtattgtgggctttatcagcaaggagcgagagcgggctctg 2022
||||||||||||||||||| || ||||||| |||||||||||||||||||| || |||
Sbjct: 2062 cctctctggaatgatgggtgcatcatgggcttcatcagcaaggagcgagagcgtgccctg 2121
Query: 2023 ctaaaggaccagcagccggggacgttcctgttgcggttcagtgagagctgccgggaaggg 2082
| |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||
Sbjct: 2122 ttgaaggaccagcagccggggaccttcctgctgcggttcagtgagagctcccgggaaggg 2181
Query: 2083 gccatcacgttcacgtgggtggagcggtcccagaacggaggcgaaccttacttccatgca 2142
|||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2182 gccatcacattcacatgggtggagcggtcccagaacggaggcgaacctgacttccatgcg 2241
Query: 2143 gttgaaccttacacgaagaaagaactctctgctgttaccttccctgacattattcgcaat 2202
|||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 2242 gttgaaccctacacgaagaaagaactttctgctgttactttccctgacatcattcgcaat 2301
Query: 2203 tataaagtcatggccgctgaaaatattccagagaatcccctgaaatatctgtatccaaat 2262
|| ||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct: 2302 tacaaagtcatggctgctgagaatattcctgagaatcccctgaagtatctgtatccaaat 2361
Query: 2263 attgataaagaccatgcttttggaaagtactactccaggccaaaggaagccccagaacct 2322
||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||
Sbjct: 2362 attgacaaagaccatgcctttggaaagtattactccaggccaaaggaagcaccagagcca 2421
Query: 2323 atggaacttgacggccctaaaggaacaggatacatcaagactgaattgatttctgtgtct 2382
||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 2422 atggaacttgatggccctaaaggaactggatatatcaagactgagttgatttctgtgtct 2481
Query: 2383 gaagttcacccttctcgacttcagaccacagacaaccttcttcccatgtctcctgaggag 2442
||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 2482 gaagttcacccttctagacttcagaccacagacaacctgctccccatgtctcctgaggag 2541
Query: 2443 tttgacgaggtgtctcgaatggtgggccctgtagaatttgac---atgatgaatgcagta 2499
||||||||||||||||| || |||||| |||||||||| ||| |||||||| |||||
Sbjct: 2542 tttgacgaggtgtctcggatagtgggctctgtagaattcgacagtatgatgaacacagta 2601
Query: 2500 tagagcatgaatttttctcatcttctctggcgacagtttccctttccacctgtgatttcc 2559
|||||||||||||||| |||||||||||||||||||||| |||| || |||||||| ||
Sbjct: 2602 tagagcatgaatttttttcatcttctctggcgacagttttccttctcatctgtgattccc 2661
Query: 2560 tcctg-tgctctgttccttcacattctgtgtttctaggaaaatgaaagaaaggccagcaa 2618
||||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 2662 tcctgctactctgttccttcacatcctgtgtttctagggaaatgaaagaaaggccagcaa 2721
Query: 2619 attcgctgcaccctgttgatagcaagtggatttttccctaattcagaaacatctgtcact 2678
|||||||||| ||||||||||||||||| ||||||| |||| ||||||||||| || |||
Sbjct: 2722 attcgctgcaacctgttgatagcaagtgaatttttctctaactcagaaacatcagttact 2781
Query: 2679 ctgaagggcttcatgcatctttactgaa-gtaaaattgaa 2717
||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 2782 ctgaagggcatcatgcatc-ttactgaaggtaaaattgaa 2820
Score = 507 bits (256), Expect = e-142
Identities = 438/496 (88%), Gaps = 2/496 (0%)
Strand = Plus / Plus
Query: 215 acagtcttggcttctgacgtgctgtgtgtagccgctgc-ttgtgtgaatcatcagccctt 273
||||||||||| || |||||||||| ||||| ||| | ||| |||||| ||| || |
Sbjct: 270 acagtcttggcacctaacgtgctgtgcgtagctgctcctttggttgaatccccaggccct 329
Query: 274 tgcttgggcacaaggt-gaaggatgtcccagtggtatgagcttcagcagcttgactccaa 332
|| | ||||||||||| | |||||||| |||||||| || ||||||||||||||||| ||
Sbjct: 330 tgttggggcacaaggtggcaggatgtctcagtggtacgaacttcagcagcttgactcaaa 389
Query: 333 attcctggagcaggttcatcagctctacgatgacagttttcccatggaaatcagacaata 392
|||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 390 attcctggagcaggttcaccagctttatgatgacagttttcccatggaaatcagacagta 449
Query: 393 tctggcacagtggctagaaaatcaggactgggagcacgctgccaatgatgtttcgtttgc 452
|||||||||||| ||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 450 cctggcacagtggttagaaaagcaagactgggagcacgctgccaatgatgtttcatttgc 509
Query: 453 caccatccgttttcatgaccttctgtcgcagctggatgatcagtacagtcgattttcctt 512
||||||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| ||
Sbjct: 510 caccatccgttttcatgacctcctgtcacagctggatgatcaatatagtcgcttttcttt 569
Query: 513 ggagaataattttttgttgcagcataacattaggaaaagcaagcgtaaccttcaggataa 572
||||||||| || ||| | ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 570 ggagaataacttcttgctacagcataacataaggaaaagcaagcgtaatcttcaggataa 629
Query: 573 ttttcaagaagacccaatacagatgtctatgatcatctgtaactgtctgaaggaggaaag 632
|||||| ||||||||||| ||||||||||||||||| | | |||||||||||| |||||
Sbjct: 630 ttttcaggaagacccaatccagatgtctatgatcatttacagctgtctgaaggaagaaag 689
Query: 633 aaagatcttggaaaatgcccagagattcaatcagactcagtcagggaatattcagagcac 692
|| || ||||||| ||||||||||| |||||| ||||||| |||||||||||||||||
Sbjct: 690 gaaaattctggaaaacgcccagagatttaatcaggctcagtcggggaatattcagagcac 749
Query: 693 tgtgatgttagacaaa 708
|||||||||||||||
Sbjct: 750 agtgatgttagacaaa 765
>gnl|UG|Mm#S8039615 Mus musculus signal transducer and activator of
transcription 1 (Stat1), mRNA /cds=(5,2254) /gb=NM_009283
/gi=6678152 /ug=Mm.8249 /len=2277
Length = 2277
Score = 987 bits (498), Expect = 0.0
Identities = 972/1130 (86%)
Strand = Plus / Plus
Query: 1342 tttgataaagatgtgagtgaaagaaatacagtaaaagggtttagaaagttcaacattttg 1401
||||| |||||||||| || | ||| ||||| ||||| ||| | ||||||||||| |||
Sbjct: 1094 tttgacaaagatgtgaacgagaaaaacacagttaaaggatttcggaagttcaacatcttg 1153
Query: 1402 ggcactcacacgaaggtgatgaacatggaggagtccaccaatgggagtctggcggcagaa 1461
|| || ||||| || |||||||||||||| || |||||||| || |||||||| || ||
Sbjct: 1154 ggtacgcacacaaaagtgatgaacatggaagaatccaccaacggaagtctggcagctgag 1213
Query: 1462 ttccgacacctgcaactgaaagaacagaaaaatgccggcgccagaaccaacgagggtcct 1521
||||||||||||||||||| ||||||||||| || || |||||| || ||||| |||
Sbjct: 1214 ctccgacacctgcaactgaaggaacagaaaaacgctgggaacagaactaatgaggggcct 1273
Query: 1522 ctcatcgttactgaagagcttcattcccttagttttgaaacccaattgtgccagcctggc 1581
||||| || || ||||| ||||| || ||||| ||||||||||| ||||||||||| |||
Sbjct: 1274 ctcattgtcaccgaagaacttcactctcttagctttgaaacccagttgtgccagccaggc 1333
Query: 1582 ttggtcattgaccttgagaccacctctctgcccgtcgtggtgatctccaacgtcagccag 1641
||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1334 ttggtgattgacctggagaccacctctcttcctgtcgtggtgatctccaacgtcagccag 1393
Query: 1642 ctcccgagcggttgggcctccatcctgtggtacaacatgctggtggcagaacccaggaat 1701
||||| || || ||||| || |||||||||||||||||||||||| |||| |||||||||
Sbjct: 1394 ctccccagtggctgggcgtctatcctgtggtacaacatgctggtgacagagcccaggaat 1453
Query: 1702 ctgtccttcttcctgaacccaccttgtgcacgatggtctcagctttcagaggtgctgagt 1761
|| ||||||||||||||||| || || || | ||||| ||||| ||||||||| |||||
Sbjct: 1454 ctctccttcttcctgaaccccccgtgcgcgtggtggtcccagctctcagaggtgttgagt 1513
Query: 1762 tggcagttttcttctgtcaccaaaagaggtctcaatgtggaccagctgaacatgctggga 1821
||||||||||| || |||||||| |||||||| || | |||||||||| ||||||||||
Sbjct: 1514 tggcagttttcatcagtcaccaagagaggtctgaacgcagaccagctgagcatgctggga 1573
Query: 1822 gagaaacttcttggtcccactgctggccctgacggtcttattccctggacgaggttctgt 1881
||||| || || || || | |||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 1574 gagaagctgctgggccctaatgctggccctgatggtcttattccatggacaaggttttgt 1633
Query: 1882 aaggaaaacataaatgacaaaaattttcctttctggctttggattgaaagtatccttgaa 1941
|||||||| || ||||| |||||||| | ||||||| ||||||||| | ||||| ||
Sbjct: 1634 aaggaaaatattaatgataaaaatttctccttctggccttggattgacaccatcctagag 1693
Query: 1942 ctcattaagaaacacctgctctctctctggaatgatgggtgtattgtgggctttatcagc 2001
||||||||||| ||||||| | ||||||||||||||||| ||| ||||||| ||||||
Sbjct: 1694 ctcattaagaacgacctgctgtgcctctggaatgatgggtgcattatgggcttcatcagc 1753
Query: 2002 aaggagcgagagcgggctctgctaaaggaccagcagccggggacgttcctgttgcggttc 2061
||||||||||| || |||||||| |||||||||||||| |||||||||||| | | |||
Sbjct: 1754 aaggagcgagaacgcgctctgctcaaggaccagcagccagggacgttcctgcttagattc 1813
Query: 2062 agtgagagctgccgggaaggggccatcacgttcacgtgggtggagcggtcccagaacgga 2121
|||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||||||
Sbjct: 1814 agtgagagctcccgggaaggggccatcacattcacatgggtggaacggtcccagaacgga 1873
Query: 2122 ggcgaaccttacttccatgcagttgaaccttacacgaagaaagaactctctgctgttacc 2181
|| |||||| |||||||||| || || || |||||||| |||||||| || ||||||||
Sbjct: 1874 ggtgaacctgacttccatgccgtggagccctacacgaaaaaagaactttcagctgttact 1933
Query: 2182 ttccctgacattattcgcaattataaagtcatggccgctgaaaatattccagagaatccc 2241
||||| || ||||||||||| || ||||||||||| || || || || ||||||||||||
Sbjct: 1934 ttcccagatattattcgcaactacaaagtcatggctgccgagaacataccagagaatccc 1993
Query: 2242 ctgaaatatctgtatccaaatattgataaagaccatgcttttggaaagtactactccagg 2301
||||| |||||||| || |||||||| |||||||| || ||||| ||||| || |||||
Sbjct: 1994 ctgaagtatctgtaccccaatattgacaaagaccacgcctttgggaagtattattccaga 2053
Query: 2302 ccaaaggaagccccagaacctatggaacttgacggccctaaaggaacaggatacatcaag 2361
||||||||||| |||||||| ||||| ||||||| |||||| |||| ||||||||||||
Sbjct: 2054 ccaaaggaagcaccagaaccgatggagcttgacgaccctaagcgaactggatacatcaag 2113
Query: 2362 actgaattgatttctgtgtctgaagttcacccttctcgacttcagaccacagacaacctt 2421
||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 2114 actgagttgatttctgtgtctgaagtccacccttctagacttcagaccacagacaacctg 2173
Query: 2422 cttcccatgtctcctgaggagtttgacgaggtgtctcgaatggtgggccc 2471
|||||||||||||| ||||||||||| ||| |||| || || ||||||||
Sbjct: 2174 cttcccatgtctccagaggagtttgatgagatgtcccggatagtgggccc 2223
Score = 462 bits (233), Expect = e-128
Identities = 509/601 (84%)
Strand = Plus / Plus
Query: 707 aagttatgtgtatagagcatgaaatcaagaccctagaagatctacaagatgaatatgact 766
|||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 459 aagtcatgtgcatagagcaggaaatcaagaccctagaagaattacaagatgaatatgact 518
Query: 767 ttaaatgcaaaaccttgcagaatagagaacatgataccaatggtgtggcaaagaacgatc 826
||||||||||||||| ||||| |||||| ||| ||||||||||||| |||| ||| |
Sbjct: 519 ttaaatgcaaaacctctcagaacagagaaggtgaagccaatggtgtggcgaagagcgacc 578
Query: 827 agaaacaggaacagatgttactccaaaagatgtatttaatgcttgacaacaagagaaagg 886
| |||||||||||| || | ||||| ||||||| ||||||||||||||| ||||||||||
Sbjct: 579 aaaaacaggaacagctgctgctccacaagatgtttttaatgcttgacaataagagaaagg 638
Query: 887 aagtagttaacaaaataatagagttattgaatgtcaccgaacttacccagaaagccctga 946
| || || ||||||| | |||||| ||||| || ||| || || ||||| | ||||
Sbjct: 639 agataattcacaaaatcagagagttgctgaattccatcgagctcactcagaacactctga 698
Query: 947 ttaatgatgaactggtggaatggaagcggagacagcagagtgcctgtatcgggggacccc 1006
||||||| || || ||||| |||||||| || |||||||| ||||| ||||||||||| |
Sbjct: 699 ttaatgacgagctcgtggagtggaagcgaaggcagcagagcgcctgcatcgggggaccgc 758
Query: 1007 ccaacgcttgcctcgatcagctgcagaactggttcaccatagttgcagaaagtctgcagc 1066
||||||| ||||| ||||||||||| | ||||||||||| |||||||| | |||||||
Sbjct: 759 ccaacgcctgcctggatcagctgcaaacgtggttcaccattgttgcagagaccctgcagc 818
Query: 1067 aggttcgtcagcagcttaaaaagcttgaggaattggaacagaaatacacctatgaacatg 1126
|| | |||||||||||||||||||| ||||| ||||||||||||| ||||||||| | |
Sbjct: 819 agatccgtcagcagcttaaaaagctggaggagttggaacagaaattcacctatgagcccg 878
Query: 1127 accctatcacaaaaaacaaacaagcgttgtgggaccgcaccttcagcctcttccagcagc 1186
||||||| ||||||||||| || | ||||| || || |||||| ||||||||||||||
Sbjct: 879 accctattacaaaaaacaagcaggtgttgtcagatcgaaccttcctcctcttccagcagc 938
Query: 1187 tcattcagagctcatttgtggtggaaagacagccctgcatgccaactcatcctcagaggc 1246
||||||||||||| || ||||| ||| ||||||| |||||||| ||||| || |||||||
Sbjct: 939 tcattcagagctccttcgtggtagaacgacagccgtgcatgcccactcacccgcagaggc 998
Query: 1247 cattggtcctgaagactggagtacaatttactgtgaagttgagactgttggtgaagttgc 1306
| ||||| |||||||||| ||||| || ||||| |||| ||||||||||||||| ||||
Sbjct: 999 ccctggtcttgaagactggggtacagttcactgtcaagtcgagactgttggtgaaattgc 1058
Query: 1307 a 1307
|
Sbjct: 1059 a 1059
Score = 383 bits (193), Expect = e-104
Identities = 358/413 (86%)
Strand = Plus / Plus
Query: 292 aggatgtcccagtggtatgagcttcagcagcttgactccaaattcctggagcaggttcat 351
|||||||| ||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 2 aggatgtcacagtggttcgagcttcagcagctggactccaagttcctggagcaggtccac 61
Query: 352 cagctctacgatgacagttttcccatggaaatcagacaatatctggcacagtggctagaa 411
||||| |||||||||||||| ||||||||||||||||| || ||||| |||||||| |||
Sbjct: 62 cagctgtacgatgacagtttccccatggaaatcagacagtacctggcccagtggctggaa 121
Query: 412 aatcaggactgggagcacgctgccaatgatgtttcgtttgccaccatccgttttcatgac 471
|| || |||||||||||||||||| ||||||| |||||||| |||||||| || ||||||
Sbjct: 122 aagcaagactgggagcacgctgcctatgatgtctcgtttgcgaccatccgcttccatgac 181
Query: 472 cttctgtcgcagctggatgatcagtacagtcgattttccttggagaataattttttgttg 531
|| || || |||||||| || |||||||| || ||||| ||||||||||||| ||||||
Sbjct: 182 ctcctctcacagctggacgaccagtacagccgcttttctctggagaataatttcttgttg 241
Query: 532 cagcataacattaggaaaagcaagcgtaaccttcaggataattttcaagaagacccaata 591
||||| ||||| |||||||||||||||| || |||||||| || |||||||| || ||
Sbjct: 242 cagcacaacatacggaaaagcaagcgtaatctccaggataacttccaagaagatcccgta 301
Query: 592 cagatgtctatgatcatctgtaactgtctgaaggaggaaagaaagatcttggaaaatgcc 651
|||||||| |||||||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 302 cagatgtccatgatcatctacaactgtctgaaggaagaaaggaagattttggaaaatgcc 361
Query: 652 cagagattcaatcagactcagtcagggaatattcagagcactgtgatgttaga 704
|| ||||| |||||| | ||| || |||||||||| |||||||||||||||
Sbjct: 362 caaagatttaatcaggcccaggagggaaatattcagaacactgtgatgttaga 414
>gnl|UG|Bt#S11964615 BP250019B10B12 Soares normalized bovine placenta
Bos taurus cDNA clone BP250019B10B12 5', mRNA sequence
/clone=BP250019B10B12 /clone_end=5' /gb=BF042916
/gi=10759971 /ug=Bt.9624 /len=559
Length = 559
Score = 672 bits (339), Expect = 0.0
Identities = 450/487 (92%)
Strand = Plus / Plus
Query: 1901 aaaattttcctttctggctttggattgaaagtatccttgaactcattaagaaacacctgc 1960
|||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 1 aaaattttccgttctggctttggatcgaaagcatccttgaactcattaaaaaacacctgc 60
Query: 1961 tctctctctggaatgatgggtgtattgtgggctttatcagcaaggagcgagagcgggctc 2020
| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| || |
Sbjct: 61 ttgctctctggaatgatgggtgtatcgtgggctttattagcaaggagcgagagcgagccc 120
Query: 2021 tgctaaaggaccagcagccggggacgttcctgttgcggttcagtgagagctgccgggaag 2080
|||| |||||||| ||||| |||||||||||| |||| ||||| ||||||||||||||||
Sbjct: 121 tgctgaaggaccaacagcctgggacgttcctgctgcgcttcagcgagagctgccgggaag 180
Query: 2081 gggccatcacgttcacgtgggtggagcggtcccagaacggaggcgaaccttacttccatg 2140
|||| |||||||||||||||||||| |||||||| || ||||| |||||||||||||| |
Sbjct: 181 gggcgatcacgttcacgtgggtggaacggtcccaaaatggaggtgaaccttacttccacg 240
Query: 2141 cagttgaaccttacacgaagaaagaactctctgctgttaccttccctgacattattcgca 2200
| |||||||| ||||| ||||||||||| ||||| ||||| || |||||||||||||| |
Sbjct: 241 cggttgaaccctacacaaagaaagaactttctgcggttacttttcctgacattattcgta 300
Query: 2201 attataaagtcatggccgctgaaaatattccagagaatcccctgaaatatctgtatccaa 2260
|||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 301 attataaagtcatggctgctgaaaatattccagagaatcccctgaagtttctgtatccaa 360
Query: 2261 atattgataaagaccatgcttttggaaagtactactccaggccaaaggaagccccagaac 2320
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
Sbjct: 361 atattgataaagaccatgcctttggaaaatactactccaggccaaaggaagccccagagc 420
Query: 2321 ctatggaacttgacggccctaaaggaacaggatacatcaagactgaattgatttctgtgt 2380
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctatggaacttgatggccctaaaggaacaggatacatcaagactgaattgatttctgtgt 480
Query: 2381 ctgaagt 2387
|||||||
Sbjct: 481 ctgaagt 487
>gnl|UG|Ssc#S6077542 MI-P-CP0-nvi-c-02-0-UI.s1 MI-P-CP0 Sus scrofa
cDNA clone MI-P-CP0-nvi-c-02-0-UI 3', mRNA sequence
/clone=MI-P-CP0-nvi-c-02-0-UI /clone_end=3' /gb=BI401111
/gi=15180172 /ug=Ssc.12141 /len=197
Length = 197
Score = 285 bits (144), Expect = 5e-75
Identities = 166/172 (96%), Gaps = 1/172 (0%)
Strand = Plus / Plus
Query: 2529 gcgacagtttccctttccacctgtgatttcctcctgtgctctgttccttcacattctgtg 2588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 gcgacagtttccctttccacctgtgatttcctcctgtgctctgttccttcacattctgtg 78
Query: 2589 tttctaggaaaatgaaagaaaggccagcaaattcgctgcaccctgttgatagcaagtgga 2648
||||||||||||||||| |||||||| ||||||| |||||||||||||||| ||||||||
Sbjct: 79 tttctaggaaaatgaaataaaggccaacaaattccctgcaccctgttgataacaagtgga 138
Query: 2649 tttttccctaattcagaaacatctgtcactct-gaagggcttcatgcatctt 2699
||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 139 tttttccctaattcacaaacatctgtcactctcgaagggcttcatgcatctt 190
>gnl|UG|Mm#S8042417 Mus musculus signal transducer and activator of
transcription 4 (Stat4), mRNA /cds=(488,2734)
/gb=NM_011487 /gi=6755669 /ug=Mm.1550 /len=2982
Length = 2982
Score = 54.0 bits (27), Expect = 4e-05
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1197 ctcatttgtggtggaaagacagccctgcatgccaactcatcctcagaggcc 1247
|||||||||||| || ||||||| ||||||||||| || |||||||||||
Sbjct: 1429 ctcatttgtggtcgagcgacagccatgcatgccaacgcaccctcagaggcc 1479
>gnl|UG|Hs#S4554147 Homo sapiens signal transducer and activator of
transcription 3 (acute-phase response factor) (STAT3),
transcript variant 1, mRNA /cds=(241,2553) /gb=NM_139276
/gi=21618339 /ug=Hs.321677 /len=3455
Length = 3455
Score = 52.0 bits (26), Expect = 1e-04
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1654 tgggcctccatcctgtggtacaacatgctg 1683
||||| ||||||||||||||||||||||||
Sbjct: 1660 tgggcgtccatcctgtggtacaacatgctg 1689
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1988 tgggctttatcagcaaggagcgagagcgggc 2018
||||||||||||| |||||||| ||||||||
Sbjct: 1997 tgggctttatcagtaaggagcgggagcgggc 2027
Score = 36.2 bits (18), Expect = 8.3
Identities = 33/38 (86%)
Strand = Plus / Plus
Query: 1393 aacattttgggcactcacacgaaggtgatgaacatgga 1430
|||||| ||||||| |||| || ||||||||||||||
Sbjct: 1393 aacattctgggcacaaacacaaaagtgatgaacatgga 1430
>gnl|UG|Hs#S1727943 Homo sapiens signal transducer and activator of
transcription 4 (STAT4), mRNA /cds=(255,2501)
/gb=NM_003151 /gi=21618332 /ug=Hs.80642 /len=2761
Length = 2761
Score = 50.1 bits (25), Expect = 5e-04
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1197 ctcatttgtggtggaaagacagccctgcatgccaactcatcctcagaggccattggt 1253
|||||||||||| || ||||||| || |||||||| || ||||||||||| |||||
Sbjct: 1196 ctcatttgtggttgagcgacagccatgtatgccaacccaccctcagaggccgttggt 1252
Score = 38.2 bits (19), Expect = 2.1
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 2417 accttcttcccatgtctcc 2435
|||||||||||||||||||
Sbjct: 2401 accttcttcccatgtctcc 2419
Score = 36.2 bits (18), Expect = 8.3
Identities = 39/46 (84%)
Strand = Plus / Plus
Query: 338 tggagcaggttcatcagctctacgatgacagttttcccatggaaat 383
|||||||||| |||| |||| ||||||| ||||||||||||||
Sbjct: 298 tggagcaggtggatcaattctatgatgacaactttcccatggaaat 343
>gnl|UG|Bt#S14852023 616392 MARC 6BOV Bos taurus cDNA 5', mRNA
sequence /clone_end=5' /gb=CB436076 /gi=29217743
/ug=Bt.20763 /len=686
Length = 686
Score = 50.1 bits (25), Expect = 5e-04
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1393 aacattttgggcactcacacgaaggtgatgaacatggaggagtccaccaatgg 1445
|||||| ||||||| ||||||| |||||||||||||| ||||| | ||||||
Sbjct: 127 aacattctgggcacaaacacgaaagtgatgaacatggaagagtctaacaatgg 179
Score = 44.1 bits (22), Expect = 0.034
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1654 tgggcctccatcctgtggtacaacatgctg 1683
||||| |||||||| |||||||||||||||
Sbjct: 394 tgggcgtccatcctatggtacaacatgctg 423
>gnl|UG|Mm#S9743723 Mus musculus signal transducer and activator of
transcription 3 (Stat3), mRNA /cds=(184,2352)
/gb=NM_011486 /gi=24475592 /ug=Mm.196029 /len=2953
Length = 2953
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1393 aacattttgggcactcacacgaaggtgatgaacatggaggagtc 1436
|||||| ||||||| |||| || ||||||||||||||||||||
Sbjct: 1336 aacattctgggcacgaacacaaaagtgatgaacatggaggagtc 1379
Score = 40.1 bits (20), Expect = 0.53
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 1588 attgaccttgagaccacctctctgcccgtcgtggtgatctccaacgtcagccagctcccg 1647
|||||||| |||||| ||| |||| || ||||||||||||||| || | ||| | ||
Sbjct: 1537 attgacctagagacccactccttgccagttgtggtgatctccaacatctgtcagatgcca 1596
Query: 1648 agcggttgggcctccatcctgtggtacaacatgctg 1683
| | |||||| || ||||||||||| |||||||||
Sbjct: 1597 aatgcttgggcatcaatcctgtggtataacatgctg 1632
Score = 38.2 bits (19), Expect = 2.1
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1996 atcagcaaggagcgagagcgggc 2018
|||||||||||||| ||||||||
Sbjct: 1948 atcagcaaggagcgggagcgggc 1970
>gnl|UG|Hs#S4611446 AGENCOURT_8217750 Lupski_sympathetic_trunk Homo
sapiens cDNA clone IMAGE:6187908 5', mRNA sequence
/clone=IMAGE:6187908 /clone_end=5' /gb=BQ722629
/gi=21861526 /ug=Hs.421342 /len=921
Length = 921
Score = 46.1 bits (23), Expect = 0.009
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1988 tgggctttatcagcaaggagcgagagcgggc 2018
||||||||||||| |||||||| ||||||||
Sbjct: 333 tgggctttatcagtaaggagcgggagcgggc 363
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: May 6, 2003 5:18 PM
Number of letters in database: 241,976,893
Number of sequences in database: 230,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 444252
Number of Sequences: 230285
Number of extensions: 444252
Number of successful extensions: 34340
Number of sequences better than 10.0: 75
length of query: 2717
length of database: 241,976,893
effective HSP length: 19
effective length of query: 2698
effective length of database: 237,601,478
effective search space: 641048787644
effective search space used: 641048787644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)