>20030531C-003703 (20030531C-003703) 20030531C-003703 AGTCTGTTGG CTGCGGCAGC AGGTAGCAAA GTGACCCTGA GGACTTGAGT GCTCCGGTAG CCCCCGCGGC TGGAGAGTGA GCAGTTACCA TGGACGGGTT CCGTATATTC ACTTCAGATA ATTACACAGA GGATGACTTG GGCTCAGGTG ACTATGACTC CATAAAGGAA CCCTGTTTCC GGGAGGAAAA TGCCCATTTC AACCGAATCT TTCTGCCCAC TGTCTACTCC ATCATCTTCT TAACTGGCAT AGTGGGTAAT GGATTGGTCA TCCTGGTCAT GGGTTACCAG AAGAAACTGA GAAGCATGAC GGACAAGTAC AGACTGCACC TGTCTGTGGC AGACCTTCTC TTTGTCCTCA CACTTCCCTT CTGGGCAGTT GATGCCGTGG CAAACTGGTA CTTTGGGAAG TTTCTGTGCA AGGCAGTCCA TGTCATCTAT ACTGTCAATC TCTACAGCAG TGTGCTCATC CTGGCCTTCA TCAGTCTGGA CCGGTACCTG GCTATCGTCC ATGCCACCAA CAGTCAGAGG CCAAGGAAGC TATTGGCTGA AAAAGTGGTC TATGTCGGCG TCTGGATACC TGCCCTCCTG TTGACTATTC CTGATTTCAT CTTTGCGAAT GTCAGGGAGG GGGATGGGAG GTACATCTGT GACCGCTTCT ACCCCAATGA CCTGTGGTTA GTGGTGTTCC AGTTTCAGCA CATCATGGTT GGCCTTATCC TGCCGGGTAT TGTCATCCTA TCTTGCTATT GCATCATCAT CTCCAAGCTG TCCCACTCCA AGGGCTATCA GAAGCGCAAA GCTCTCAAAA CCACCGTTAT CCTCATCCTG GCTTTCTTCG CCTGCTGGCT GCCATACTAC ATCGGGATCA GCATCGACTC CTTCATCCTC CTGGAAATCA TCCAGCAAGG GTGTGAGTTT GAGAGCACTG TGCACAAGTG GATTTCCATC ACTGAGGCCC TTGCCTTTTT CCACTGTTGC CTGAATCCTA TCCTCTACGC TTTCCTTGGA GCCAAATTTA AAACCTCTGC CCAGCACGCA CTCACCTCTG TGAGCAGAGG GTCCAGCCTA AAGATCCTCT
Query= 20030531C-003703 (20030531C-003703) 20030531C-003703
(1080 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
230,285 sequences; 241,976,893 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Hs#S1730515 Homo sapiens chemokine (C-X-C motif) recepto... 1344 0.0
Alignment gnl|UG|Bt#S12073085 Bos taurus chemokine (C-X-C motif) receptor... 1306 0.0
Alignment gnl|UG|Mm#S8042651 Mus musculus chemokine (C-X-C motif) recepto... 466 e-129
Alignment gnl|UG|Hs#S3255445 AL535384 LTI_FL013_FBrn1 Homo sapiens cDNA c... 236 2e-60
Alignment gnl|UG|Hs#S1727026 Homo sapiens interleukin 8 receptor, beta (I... 54 1e-05
Alignment gnl|UG|Hs#S1730670 Homo sapiens interleukin 8 receptor, alpha (... 52 5e-05
Alignment gnl|UG|Ssc#S14901065 jns62_F01.f jns Sus scrofa cDNA 5', mRNA s... 52 5e-05
Alignment gnl|UG|Bt#S12073031 Bos taurus interleukin 8 receptor, beta (IL... 46 0.003
Alignment gnl|UG|Mm#S8041335 Mus musculus chemokine (C-C motif) receptor ... 42 0.053
Alignment gnl|UG|Mm#S9745291 Mus musculus olfactory receptor MOR103-2 (MO... 40 0.21
>gnl|UG|Hs#S1730515 Homo sapiens chemokine (C-X-C motif) receptor 4
(CXCR4), mRNA /cds=(89,1147) /gb=NM_003467 /gi=4503174
/ug=Hs.89414 /len=1679
Length = 1679
Score = 1344 bits (678), Expect = 0.0
Identities = 977/1076 (90%), Gaps = 3/1076 (0%)
Strand = Plus / Plus
Query: 5 tgttggctgcggcagcaggtagcaaagtgaccctgaggacttgagtgctccggtagcccc 64
||||||||||||||||||||||||||||||| | |||| | |||||||||| |||||| |
Sbjct: 4 tgttggctgcggcagcaggtagcaaagtgacgccgagggcctgagtgctccagtagccac 63
Query: 65 cgcggctggagagtgagcagttaccatggacgggttccgtatattcacttcagataatta 124
||| ||||||| ||| ||||||||||| ||| || |||||| |||||||||||| ||
Sbjct: 64 cgcatctggagaaccagcggttaccatggaggggatcagtatatacacttcagataacta 123
Query: 125 cacagaggatgacttgggctcaggtgactatgactccataaaggaaccctgtttccggga 184
||| ||| || |||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct: 124 caccgag---gaaatgggctcaggggactatgactccatgaaggaaccctgtttccgtga 180
Query: 185 ggaaaatgcccatttcaaccgaatctttctgcccactgtctactccatcatcttcttaac 244
|||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||
Sbjct: 181 agaaaatgctaatttcaataaaatcttcctgcccaccatctactccatcatcttcttaac 240
Query: 245 tggcatagtgggtaatggattggtcatcctggtcatgggttaccagaagaaactgagaag 304
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggcattgtgggcaatggattggtcatcctggtcatgggttaccagaagaaactgagaag 300
Query: 305 catgacggacaagtacagactgcacctgtctgtggcagaccttctctttgtcctcacact 364
|||||||||||||||||| ||||||||||| ||||| ||||| ||||||||| |||| ||
Sbjct: 301 catgacggacaagtacaggctgcacctgtcagtggccgacctcctctttgtcatcacgct 360
Query: 365 tcccttctgggcagttgatgccgtggcaaactggtactttgggaagtttctgtgcaaggc 424
||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct: 361 tcccttctgggcagttgatgccgtggcaaactggtactttgggaacttcctatgcaaggc 420
Query: 425 agtccatgtcatctatactgtcaatctctacagcagtgtgctcatcctggccttcatcag 484
||||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 421 agtccatgtcatctacacagtcaacctctacagcagtgtcctcatcctggccttcatcag 480
Query: 485 tctggaccggtacctggctatcgtccatgccaccaacagtcagaggccaaggaagctatt 544
||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 481 tctggaccgctacctggccatcgtccacgccaccaacagtcagaggccaaggaagctgtt 540
Query: 545 ggctgaaaaagtggtctatgtcggcgtctggatacctgccctcctgttgactattcctga 604
||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||||| ||
Sbjct: 541 ggctgaaaaggtggtctatgttggcgtctggatccctgccctcctgctgactattcccga 600
Query: 605 tttcatctttgcgaatgtcagggagggggatgggaggtacatctgtgaccgcttctaccc 664
||||||||||| || ||||| |||| |||| || || ||||||||||||||||||||
Sbjct: 601 cttcatctttgccaacgtcagtgaggcagatgacagatatatctgtgaccgcttctaccc 660
Query: 665 caatgacctgtggttagtggtgttccagtttcagcacatcatggttggccttatcctgcc 724
||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caatgacttgtgggtggttgtgttccagtttcagcacatcatggttggccttatcctgcc 720
Query: 725 gggtattgtcatcctatcttgctattgcatcatcatctccaagctgtcccactccaaggg 784
|||||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 721 tggtattgtcatcctgtcctgctattgcattatcatctccaagctgtcacactccaaggg 780
Query: 785 ctatcagaagcgcaaagctctcaaaaccaccgttatcctcatcctggctttcttcgcctg 844
| | ||||||||||| || ||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 781 ccaccagaagcgcaaggccctcaagaccacagtcatcctcatcctggctttcttcgcctg 840
Query: 845 ctggctgccatactacatcgggatcagcatcgactccttcatcctcctggaaatcatcca 904
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 841 ttggctgccttactacattgggatcagcatcgactccttcatcctcctggaaatcatcaa 900
Query: 905 gcaagggtgtgagtttgagagcactgtgcacaagtggatttccatcactgaggcccttgc 964
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||
Sbjct: 901 gcaagggtgtgagtttgagaacactgtgcacaagtggatttccatcaccgaggccctagc 960
Query: 965 ctttttccactgttgcctgaatcctatcctctacgctttccttggagccaaatttaaaac 1024
|| ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 961 tttcttccactgttgtctgaaccccatcctctatgctttccttggagccaaatttaaaac 1020
Query: 1025 ctctgcccagcacgcactcacctctgtgagcagagggtccagcctaaagatcctct 1080
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1021 ctctgcccagcacgcactcacctctgtgagcagagggtccagcctcaagatcctct 1076
>gnl|UG|Bt#S12073085 Bos taurus chemokine (C-X-C motif) receptor 4
(CXCR4), mRNA /cds=(1,1062) /gb=NM_174301 /gi=27805834
/ug=Bt.8957 /len=1062
Length = 1062
Score = 1306 bits (659), Expect = 0.0
Identities = 908/991 (91%)
Strand = Plus / Plus
Query: 90 atggacgggttccgtatattcacttcagataattacacagaggatgacttgggctcaggt 149
||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 1 atggaagggatccgtatattcacttccgataattacaccgaggatgacttgggctcgggt 60
Query: 150 gactatgactccataaaggaaccctgtttccgggaggaaaatgcccatttcaaccgaatc 209
|||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 61 gactatgattccatgaaggaaccctgcttccgggaagaaaatgcccatttcaaccggatc 120
Query: 210 tttctgcccactgtctactccatcatcttcttaactggcatagtgggtaatggattggtc 269
|| ||||||||||||||||||||||||||| | |||||||||||||| || |||||||||
Sbjct: 121 ttcctgcccactgtctactccatcatcttcctgactggcatagtgggcaacggattggtc 180
Query: 270 atcctggtcatgggttaccagaagaaactgagaagcatgacggacaagtacagactgcac 329
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 attctggtcatgggttaccagaagaaactaagaagcatgacggacaagtacagactgcac 240
Query: 330 ctgtctgtggcagaccttctctttgtcctcacacttcccttctgggcagttgatgccgtg 389
||||||||||| ||||| || ||||||||||| ||||||||||||||||| ||||| |||
Sbjct: 241 ctgtctgtggcggacctcctgtttgtcctcacgcttcccttctgggcagtcgatgctgtg 300
Query: 390 gcaaactggtactttgggaagtttctgtgcaaggcagtccatgtcatctatactgtcaat 449
||||||||||||||||||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 301 gcaaactggtactttgggaagttcctctgcaaggcagtccatgtcatctacacagtcaac 360
Query: 450 ctctacagcagtgtgctcatcctggccttcatcagtctggaccggtacctggctatcgtc 509
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 ctctacagcagtgtcctcatcctggcctttatcagtctggaccggtacctggctatcgtc 420
Query: 510 catgccaccaacagtcagaggccaaggaagctattggctgaaaaagtggtctatgtcggc 569
||||| ||||||||||||| |||||||||||| |||||||||| ||||||||||| ||
Sbjct: 421 catgctaccaacagtcagaagccaaggaagctgctggctgaaaaggtggtctatgttggt 480
Query: 570 gtctggatacctgccctcctgttgactattcctgatttcatctttgcgaatgtcagggag 629
|||||| ||||||| |||||||||||||||||||| |||||||||| | ||| ||||
Sbjct: 481 gtctggctacctgctgtcctgttgactattcctgatctcatctttgctgacatcaaggag 540
Query: 630 ggggatgggaggtacatctgtgaccgcttctaccccaatgacctgtggttagtggtgttc 689
| ||||| ||||||||||||||| |||||||| |||| ||||||||| ||||||||||
Sbjct: 541 gtggatgagaggtacatctgtgatcgcttctatcccagcgacctgtggctagtggtgttt 600
Query: 690 cagtttcagcacatcatggttggccttatcctgccgggtattgtcatcctatcttgctat 749
||||||||||||||| |||| |||||| ||||||| ||||| |||||||| || |||||
Sbjct: 601 cagtttcagcacatcgtggtcggccttctcctgcctggtatcgtcatcctgtcctgctac 660
Query: 750 tgcatcatcatctccaagctgtcccactccaagggctatcagaagcgcaaagctctcaaa 809
||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 661 tgcattatcatctccaagctgtcccactccaaaggctatcagaagcgcaaggccctcaag 720
Query: 810 accaccgttatcctcatcctggctttcttcgcctgctggctgccatactacatcgggatc 869
||||| ||||||||||||||| |||||||||||||||||||||| |||||||| ||||||
Sbjct: 721 accacagttatcctcatcctgactttcttcgcctgctggctgccctactacattgggatc 780
Query: 870 agcatcgactccttcatcctcctggaaatcatccagcaagggtgtgagtttgagagcact 929
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agcatcgactccttcatccttctggaaatcatccagcaagggtgtgagtttgagagcact 840
Query: 930 gtgcacaagtggatttccatcactgaggcccttgcctttttccactgttgcctgaatcct 989
||||||||||||||||||||||| |||||||| || ||||| ||||| |||||||||||
Sbjct: 841 gtgcacaagtggatttccatcaccgaggccctagctttttttcactgctgcctgaatccc 900
Query: 990 atcctctacgctttccttggagccaaatttaaaacctctgcccagcacgcactcacctct 1049
|||||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 901 atcctctatgccttccttggggccaaatttaaaacctctgcccagcatgcactcacctct 960
Query: 1050 gtgagcagagggtccagcctaaagatcctct 1080
|||||||||||||||||||| ||||||||||
Sbjct: 961 gtgagcagagggtccagcctgaagatcctct 991
>gnl|UG|Mm#S8042651 Mus musculus chemokine (C-X-C motif) receptor 4
(Cxcr4), mRNA /cds=(1,1080) /gb=NM_009911 /gi=6753459
/ug=Mm.1401 /len=1080
Length = 1080
Score = 466 bits (235), Expect = e-129
Identities = 409/467 (87%)
Strand = Plus / Plus
Query: 150 gactatgactccataaaggaaccctgtttccgggaggaaaatgcccatttcaaccgaatc 209
||||||||||||| ||||||||||| |||||||| ||||| | ||||||||| | |||
Sbjct: 64 gactatgactccaacaaggaaccctgcttccgggatgaaaacgtccatttcaataggatc 123
Query: 210 tttctgcccactgtctactccatcatcttcttaactggcatagtgggtaatggattggtc 269
|| |||||||| |||||| |||||||||||| ||||||||||| || |||||||||||
Sbjct: 124 ttcctgcccaccatctacttcatcatcttcttgactggcatagtcggcaatggattggtg 183
Query: 270 atcctggtcatgggttaccagaagaaactgagaagcatgacggacaagtacagactgcac 329
|||||||||||||||||||||||||| || || |||||||||||||||||| | ||||||
Sbjct: 184 atcctggtcatgggttaccagaagaagctaaggagcatgacggacaagtaccggctgcac 243
Query: 330 ctgtctgtggcagaccttctctttgtcctcacacttcccttctgggcagttgatgccgtg 389
||||| ||||| ||||| ||||||||| ||||||| ||||||||||||||||||||| ||
Sbjct: 244 ctgtcagtggctgacctcctctttgtcatcacactccccttctgggcagttgatgccatg 303
Query: 390 gcaaactggtactttgggaagtttctgtgcaaggcagtccatgtcatctatactgtcaat 449
|| |||||||||||||||| ||| |||| ||||| |||||| ||||||| ||||||||
Sbjct: 304 gctgactggtactttgggaaatttttgtgtaaggctgtccatatcatctacactgtcaac 363
Query: 450 ctctacagcagtgtgctcatcctggccttcatcagtctggaccggtacctggctatcgtc 509
||||||||||| || |||||||||||||||||||| |||||||||||||| || || |||
Sbjct: 364 ctctacagcagcgttctcatcctggccttcatcagcctggaccggtacctcgccattgtc 423
Query: 510 catgccaccaacagtcagaggccaaggaagctattggctgaaaaagtggtctatgtcggc 569
|| |||||||||||||| ||||||||||| || |||||||||| | |||||||| |||
Sbjct: 424 cacgccaccaacagtcaaaggccaaggaaactgctggctgaaaaggcagtctatgtgggc 483
Query: 570 gtctggatacctgccctcctgttgactattcctgatttcatctttgc 616
|||||||| || |||||||| ||||||| ||||| |||||||||||
Sbjct: 484 gtctggatcccagccctcctcctgactatacctgacttcatctttgc 530
Score = 347 bits (175), Expect = 7e-94
Identities = 382/451 (84%)
Strand = Plus / Plus
Query: 628 agggggatgggaggtacatctgtgaccgcttctaccccaatgacctgtggttagtggtgt 687
||||||||| |||||||||||||||||| | |||||| || ||||||| | |||||||
Sbjct: 557 agggggatgacaggtacatctgtgaccgcctttaccccgatagcctgtggatggtggtgt 616
Query: 688 tccagtttcagcacatcatggttggccttatcctgccgggtattgtcatcctatcttgct 747
| || || ||||| || ||||| || || |||||||| || || |||||||| || || |
Sbjct: 617 ttcaattccagcatataatggtgggtctcatcctgcccggcatcgtcatcctctcctgtt 676
Query: 748 attgcatcatcatctccaagctgtcccactccaagggctatcagaagcgcaaagctctca 807
| ||||||||||||||||||||||| |||||||||||| | ||||||||||| || ||||
Sbjct: 677 actgcatcatcatctccaagctgtcacactccaagggccaccagaagcgcaaggccctca 736
Query: 808 aaaccaccgttatcctcatcctggctttcttcgcctgctggctgccatactacatcggga 867
| || || || ||||||||||| |||||||| ||||||||||||||||| || | ||||
Sbjct: 737 agacgacagtcatcctcatcctagctttctttgcctgctggctgccatattatgtgggga 796
Query: 868 tcagcatcgactccttcatcctcctggaaatcatccagcaagggtgtgagtttgagagca 927
|||||||||||||||||||||| ||| ||||| ||||||| ||||| || |||||||
Sbjct: 797 tcagcatcgactccttcatccttttgggggtcatcaagcaaggatgtgacttcgagagca 856
Query: 928 ctgtgcacaagtggatttccatcactgaggcccttgcctttttccactgttgcctgaatc 987
|||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||| |
Sbjct: 857 tcgtgcacaagtggatctccatcacagaggccctcgccttcttccactgttgcctgaacc 916
Query: 988 ctatcctctacgctttccttggagccaaatttaaaacctctgcccagcacgcactcacct 1047
| |||||||| || ||||| || ||||| || |||| |||||||||||| ||||||| ||
Sbjct: 917 ccatcctctatgccttcctcggggccaagttcaaaagctctgcccagcatgcactcaact 976
Query: 1048 ctgtgagcagagggtccagcctaaagatcct 1078
| |||||||||| |||||||| ||||||||
Sbjct: 977 ccatgagcagaggctccagcctcaagatcct 1007
>gnl|UG|Hs#S3255445 AL535384 LTI_FL013_FBrn1 Homo sapiens cDNA clone
CS0DF009YB24 3 prime, mRNA sequence /clone=CS0DF009YB24
/clone_end=3' /gb=AL535384 /gi=12798877 /ug=Hs.421986
/len=515
Length = 515
Score = 236 bits (119), Expect = 2e-60
Identities = 160/175 (91%)
Strand = Plus / Minus
Query: 906 caagggtgtgagtttgagagcactgtgcacaagtggatttccatcactgaggcccttgcc 965
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||
Sbjct: 515 caagggtgtgagtttgagaacactgtgcacaagtggatttccatcaccgaggccctagct 456
Query: 966 tttttccactgttgcctgaatcctatcctctacgctttccttggagccaaatttaaaacc 1025
|| |||||||||| ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 455 ttcttccactgttktctgaaccccatcctctatgctttccttggagccaaatttaaaacc 396
Query: 1026 tctgcccagcacgcactcacctctgtgagcagagggtccagcctaaagatcctct 1080
||||||||| |||||||||||||| | |||||||| |||||||| ||||||||||
Sbjct: 395 tctgcccagsacgcactcacctctctcagcagaggctccagcctcaagatcctct 341
>gnl|UG|Hs#S1727026 Homo sapiens interleukin 8 receptor, beta
(IL8RB), mRNA /cds=(409,1491) /gb=NM_001557 /gi=4504682
/ug=Hs.846 /len=2856
Length = 2856
Score = 54.0 bits (27), Expect = 1e-05
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 471 ctggccttcatcagtctggaccggtacctggctatcgtccatgccac 517
||||||| ||||||| ||||||| |||||||| || |||||||||||
Sbjct: 817 ctggcctgcatcagtgtggaccgttacctggccattgtccatgccac 863
>gnl|UG|Hs#S1730670 Homo sapiens interleukin 8 receptor, alpha
(IL8RA), mRNA /cds=(101,1153) /gb=NM_000634 /gi=4504680
/ug=Hs.194778 /len=2496
Length = 2496
Score = 52.0 bits (26), Expect = 5e-05
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 472 tggccttcatcagtctggaccggtacctggctatcgtccatgccac 517
|||||| ||||||| ||||||| |||||||| || |||||||||||
Sbjct: 483 tggcctgcatcagtgtggaccgttacctggccattgtccatgccac 528
>gnl|UG|Ssc#S14901065 jns62_F01.f jns Sus scrofa cDNA 5', mRNA
sequence /clone_end=5' /gb=CB480321 /gi=29286707
/ug=Ssc.7176 /len=623
Length = 623
Score = 52.0 bits (26), Expect = 5e-05
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1055 cagagggtccagcctaaagatcctct 1080
||||||||||||||||||||||||||
Sbjct: 623 cagagggtccagcctaaagatcctct 598
>gnl|UG|Bt#S12073031 Bos taurus interleukin 8 receptor, beta
(IL8RB), mRNA /cds=(1,1083) /gb=NM_174360 /gi=27805942
/ug=Bt.4208 /len=1083
Length = 1083
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 471 ctggccttcatcagtctggaccggtacctggctatcgtccatgccac 517
||||||| |||||| ||||||| |||||||| || |||||||||||
Sbjct: 409 ctggcctgcatcagcatggaccgctacctggccattgtccatgccac 455
>gnl|UG|Mm#S8041335 Mus musculus chemokine (C-C motif) receptor 6
(Ccr6), mRNA /cds=(147,1250) /gb=NM_009835 /gi=6753317
/ug=Mm.8007 /len=1302
Length = 1302
Score = 42.1 bits (21), Expect = 0.053
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 348 ctctttgtcctcacacttcccttctgggcagtt 380
|||||||||||||| || || ||||||||||||
Sbjct: 402 ctctttgtcctcaccctaccgttctgggcagtt 434
>gnl|UG|Mm#S9745291 Mus musculus olfactory receptor MOR103-2
(MOR103-2), mRNA /cds=(1,939) /gb=NM_147039 /gi=22128870
/ug=Mm.223424 /len=939
Length = 939
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 466 tcatcctggccttcatcagtctgg 489
|||||||||||||||||| |||||
Sbjct: 599 tcatcctggccttcatcattctgg 622
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: May 6, 2003 5:18 PM
Number of letters in database: 241,976,893
Number of sequences in database: 230,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 155232
Number of Sequences: 230285
Number of extensions: 155232
Number of successful extensions: 12224
Number of sequences better than 10.0: 35
length of query: 1080
length of database: 241,976,893
effective HSP length: 19
effective length of query: 1061
effective length of database: 237,601,478
effective search space: 252095168158
effective search space used: 252095168158
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)