>20030826C-003999 (20030826C-003999) 20030826C-003999 AAGCCTTCCC TTTCCTCGCC TCTCGTTTCC CCCCTCCCAT CCCGTTTCCT CGGCCGCTCC GCTCCCTGGC GTGACTCGGC ACTGAGAGCC CCGGGAGAAG ACGCCACGGT CGCCACCTCC TGTGTCCAGG CCTCGGCCTT CCTGAGTCTA CCCCCGTCCC CTCCCGGGTC GTCTTCTCCT TCAGTTTTGA AACCGGTGGC GTCGCGGCCA CCTTGCCAGG CTCTCTGAGA ATGGTAGGTG TAAAGCCGGT CGGGAGTGAC CCGGATTTCC AGCCGGAGCT GAGCGGCGCG GGCTCCAGAC TCGCTGTGGT CAAATTCACC ATGCGAGGGT GTGGACCATG TTTAAGGATT GCCCCAGCAT TCAGTTCTAT GAGTAATAAG TATCCACAAG CAGTTTTCTT GGAAGTAGAT GTACATCAGT GTCAGGGAAC TGCTGCCACC AACAACATAT CAGCGACACC TACATTTTTG TTTTTCCGAA ACAAAGTGAG AATTGATCAG TATCAAGGAG CAGATGCCGT GGGATTAGAA GAAAAAATCA AGCAGCACTT AGAAAACGAC CCTGGAAGCA ATGAGGACAC AGATATTCCA AAAGGCTATA TGGATTTAAT GCCTTTTATT AACAAAGCTG GCTGTGAATG TCTTAATGAA AGTGACGAGC ATGGATTTGA CAACTGTTTA CGAAAAGACA TGACCTTCCT GGAATCTGAT TGTGATGAAC AGCTACTTAT TACTGTGGCA TTCAATCAGC CTGTTAAGCT TTACTCAATG AAATTTCAAG GGCCAGATAA TGGTCAGGGT CCTAAATATG TAAAAATTTT TATCAATCTA CCCCGATCTA TGGATTTTGA AGAGGCAGAA AGAAGCGAAC CAACTCAAGC TCTGGAACTA ACAGAGGATG ATATTAAAGA AGATGGTATT GTTCCACTTC GTTATGTTAA AGTTTCAGAA TGTTAACAG
Query= 20030826C-003999 (20030826C-003999) 20030826C-003999
(959 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
249,856 sequences; 258,717,139 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Hs#S1729344 Homo sapiens thioredoxin-like, 32kDa (TXNL), ... 1277 0.0
Alignment gnl|UG|Mm#S8539445 Mus musculus thioredoxin-like (Txnl), mRNA /c... 952 0.0
Alignment gnl|UG|Bt#S12372634 OTM602700301.R1 CSEQFXL05 stomach-rumen Bos ... 680 0.0
Alignment gnl|UG|Hs#S15556188 BX402576 Homo sapiens PLACENTA COT 25-NORMAL... 595 e-168
Alignment gnl|UG|Hs#S6119497 UI-H-EU1-baj-n-23-0-UI.s1 NCI_CGAP_Ct1 Homo s... 40 0.20
Alignment gnl|UG|Hs#S4813944 Homo sapiens similar to RIKEN cDNA 4933437K13... 40 0.20
Alignment gnl|UG|Mm#S10862158 Mus musculus 10 days neonate cerebellum cDNA... 40 0.20
Alignment gnl|UG|Bt#S15223001 Bos taurus SMC1 structural maintenance of ch... 40 0.20
Alignment gnl|UG|Hs#S2038970 hj08h10.y1 Soares_NFL_T_GBC_S1 Homo sapiens c... 38 0.78
Alignment gnl|UG|Mm#S11105868 Mus musculus, clone IMAGE:4526881, mRNA /gb=... 38 0.78
>gnl|UG|Hs#S1729344 Homo sapiens thioredoxin-like, 32kDa (TXNL),
mRNA /cds=(206,1075) /gb=NM_004786 /gi=4759273
/ug=Hs.114412 /len=1285
Length = 1285
Score = 1277 bits (644), Expect = 0.0
Identities = 851/915 (93%), Gaps = 5/915 (0%)
Strand = Plus / Plus
Query: 48 cctcggccgctccgc-tccctggcgtgactcggcactgagagccccgggagaagacgcca 106
||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 21 cctcggccgctccgcgtccctggcgtgactcggcactgagagtcccgggagaagactcgg 80
Query: 107 cggtcgccacctcctgtgtccaggcctcggccttcctgagtctacccccgtcccctcccg 166
||||||| ||||| | |||||||||||||||||||||||| | | || ||| |||||
Sbjct: 81 cggtcgc-acctcttctgtccaggcctcggccttcctgagcatctctccttcctctccca 139
Query: 167 ggtcgtcttctccttcagttttgaaaccggtggcgtcgcggccaccttgccaggctctct 226
| ||||||||||||||||||| || || ||||||||||||||||| |||| ||||||||
Sbjct: 140 gatcgtcttctccttcagtttcaaagccagtggcgtcgcggccaccctgccgggctctct 199
Query: 227 gaga--atggtaggtgtaaagccggtcgggagtgacccggatttccagccggagctgagc 284
| || ||||| || || ||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 200 gtgaggatggtgggggtgaagcccgtcgggagcgacccggatttccagccagagctgagc 259
Query: 285 ggcgcgggctccagactcgctgtggtcaaattcaccatgcgagggtgtggaccatgttta 344
|||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||
Sbjct: 260 ggcgcgggctccagactcgccgtggtcaagttcaccatgagagggtgtgggccatgtttg 319
Query: 345 aggattgccccagcattcagttctatgagtaataagtatccacaagcagttttcttggaa 404
||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 320 aggattgccccagcattcagttctatgagtaataaatatccacaggctgttttcttggaa 379
Query: 405 gtagatgtacatcagtgtcagggaactgctgccaccaacaacatatcagcgacacctaca 464
|| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 380 gtcgatgtacatcagtgtcagggaacagctgccaccaacaatatatcagcaacacctaca 439
Query: 465 tttttgtttttccgaaacaaagtgagaattgatcagtatcaaggagcagatgccgtggga 524
||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 440 tttttgttttttcgaaacaaagtgagaattgatcaatatcaaggagcagatgctgtggga 499
Query: 525 ttagaagaaaaaatcaagcagcacttagaaaacgaccctggaagcaatgaggacacagat 584
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 500 ttagaagaaaaaatcaagcagcacttagaaaatgaccctggaagcaatgaggacacagat 559
Query: 585 attccaaaaggctatatggatttaatgccttttattaacaaagctggctgtgaatgtctt 644
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 560 attccaaaaggctatatggatttaatgccttttattaacaaagctggttgtgaatgtctt 619
Query: 645 aatgaaagtgacgagcatggatttgacaactgtttacgaaaagacatgaccttcctggaa 704
||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 620 aatgaaagtgatgagcatggatttgacaactgtttacgaaaagacacaaccttcttggaa 679
Query: 705 tctgattgtgatgaacagctacttattactgtggcattcaatcagcctgttaagctttac 764
||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 680 tctgactgtgatgaacagctgcttattactgtggcattcaatcaacctgttaagctttat 739
Query: 765 tcaatgaaatttcaagggccagataatggtcagggtcctaaatatgtaaaaatttttatc 824
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 740 tccatgaaatttcaagggccagataatggtcagggccctaaatatgtaaaaatttttatc 799
Query: 825 aatctaccccgatctatggattttgaagaggcagaaagaagcgaaccaactcaagctctg 884
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 800 aacctaccccgatctatggattttgaagaggcagaaagaagtgaaccaactcaagctctg 859
Query: 885 gaactaacagaggatgatattaaagaagatggtattgttccacttcgttatgttaaagtt 944
||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 860 gaactgacagaggatgatattaaagaagatggcattgttccacttcgttatgtt-aagtt 918
Query: 945 tcagaatgttaacag 959
|||||||||||||||
Sbjct: 919 tcagaatgttaacag 933
>gnl|UG|Mm#S8539445 Mus musculus thioredoxin-like (Txnl), mRNA
/cds=(188,1057) /gb=NM_016792 /gi=31543901 /ug=Mm.19169
/len=2561
Length = 2561
Score = 952 bits (480), Expect = 0.0
Identities = 709/783 (90%), Gaps = 3/783 (0%)
Strand = Plus / Plus
Query: 179 cttcagttttgaaaccggtggcgtcgcggccaccttgccaggctctctgaga--atggta 236
|||||||||||| |||| ||||||||||| || |||| ||||||||| || |||||
Sbjct: 134 cttcagttttgaggccggaagcgtcgcggccgccctgccgggctctctgtgaggatggtg 193
Query: 237 ggtgtaaagccggtcgggagtgacccggatttccagccggagctgagcggcgcgggctcc 296
|| || |||||||||||||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 194 ggagtgaagccggtcgggagcgatccagatttccagccggagctgagcggggcgggctcc 253
Query: 297 agactcgctgtggtcaaattcaccatgcgagggtgtggaccatgtttaaggattgcccca 356
||||| || |||||||| ||||||||| ||||||||||||| ||| | ||||||||||
Sbjct: 254 agacttgccgtggtcaagttcaccatgagagggtgtggaccgtgtcttcggattgccccg 313
Query: 357 gcattcagttctatgagtaataagtatccacaagcagttttcttggaagtagatgtacat 416
|| ||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||| |||
Sbjct: 314 gcgttcagctctatgagtaataagtacccacaggcagtcttcttggaagtagatgtgcat 373
Query: 417 cagtgtcagggaactgctgccaccaacaacatatcagcgacacctacatttttgtttttc 476
||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 374 cagtgccagggaacagctgccaccaacaacatatcagcaacacctacgtttttgtttttt 433
Query: 477 cgaaacaaagtgagaattgatcagtatcaaggagcagatgccgtgggattagaagaaaaa 536
||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||
Sbjct: 434 cgaaacaaagtgagaatcgatcagtatcaaggagcagatgctgtgggactagaagagaaa 493
Query: 537 atcaagcagcacttagaaaacgaccctggaagcaatgaggacacagatattccaaaaggc 596
|||||||||||||||||||| || |||||||||||||||||| |||| |||||||| |||
Sbjct: 494 atcaagcagcacttagaaaatgatcctggaagcaatgaggacgcagacattccaaagggc 553
Query: 597 tatatggatttaatgccttttattaacaaagctggctgtgaatgtcttaatgaaagtgac 656
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 554 tatatggatttaatgccttttattaacaaagctggttgtgaatgtcttaatgaaagtgat 613
Query: 657 gagcatggatttgacaactgtttacgaaaagacatgaccttcctggaatctgattgtgat 716
||||| || ||||||||||||||||||||||||||| ||||| |||| ||||| ||||||
Sbjct: 614 gagcacggctttgacaactgtttacgaaaagacatgtccttcttggagtctgactgtgat 673
Query: 717 gaacagctacttattactgtggcattcaatcagcctgttaagctttactcaatgaaattt 776
|| ||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 674 gagcagctccttattactgtggcattcaatcagcctgttaagctttattccatgaagttt 733
Query: 777 caagggccagataatggtcagggtcctaaatatgtaaaaatttttatcaatctaccccga 836
||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 734 caaggaccagataacggtcagggtcctaaatatgtaaaaatttttatcaacctaccccga 793
Query: 837 tctatggattttgaagaggcagaaagaagcgaaccaactcaagctctggaactaacagag 896
|||||||||||||| ||||| ||||| || || |||||||||||||||||||| |||||
Sbjct: 794 tctatggattttgaggaggcggaaaggagtgagccaactcaagctctggaactgacagaa 853
Query: 897 gatgatattaaagaagatggtattgttccacttcgttatgttaaagtttcagaatgttaa 956
||||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||
Sbjct: 854 gatgacattaaagaagatggcattgttcctcttcgttatgttaaa-tttcagaatgtcaa 912
Query: 957 cag 959
|||
Sbjct: 913 cag 915
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 61 gctccctggcgtgactcggcact 83
|||||||||||||||||||||||
Sbjct: 22 gctccctggcgtgactcggcact 44
>gnl|UG|Bt#S12372634 OTM602700301.R1 CSEQFXL05 stomach-rumen Bos
taurus cDNA, mRNA sequence /gb=CB167998 /gi=28154123
/ug=Bt.9716 /len=862
Length = 862
Score = 680 bits (343), Expect = 0.0
Identities = 449/479 (93%), Gaps = 4/479 (0%)
Strand = Plus / Minus
Query: 483 aaagtgagaattgatcagtatcaaggagcagatgccgtgggattagaagaaaaaatcaag 542
|||||||||||||||||||||||||| | ||||| |||| | |||| ||||||||||||
Sbjct: 862 aaagtgagaattgatcagtatcaagggaccgatgctgtgg-actagaggaaaaaatcaag 804
Query: 543 cagcactt-agaaaacgaccctggaagcaatgaggacacagatattccaaaaggctatat 601
|||||||| ||| ||||||||||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 803 cagcactttagagaacgaccctgggagcaacgaggacaccgatattccgaaaggctatat 744
Query: 602 ggatttaatgccttttattaacaaagctggctgtgaatgtcttaatgaaagtgacgagca 661
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 743 ggatttaatgccttttattaacaaagctggctgtgaatgtctgaatgaaagtgatgagca 684
Query: 662 tggatttgacaactgtttacgaaaagacatgaccttcctggaatctgattgtgatgaaca 721
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 683 tggatttgacaactgtttgcgaaaagacatgaccttcttggaatctgattgtgatgaaca 624
Query: 722 gctacttattactgtggcattcaatcagcctgttaagctttactcaatgaaatttcaagg 781
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 623 gcttcttattactgtggcattcaatcagcctgttaagctttattcaatgaaatttcaagg 564
Query: 782 gccagataatggtcagggtcctaaatatgtaaaaatttttatcaatctaccccgatctat 841
||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 563 gccagataacggtcagggtcctaaatacgtaaaaatttttatcaatctaccgcgatctat 504
Query: 842 ggattttgaagaggcagaaagaagcgaaccaactcaagctctggaactaacagaggatga 901
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 503 ggattttgaagaggcagaaagaagtgagccaactcaagctctggaactaacagaggatga 444
Query: 902 ta-ttaaagaagatggtattgttccacttcgttatgttaaagtttcagaatgttaacag 959
|| ||||||||||||||||||| || |||||||| ||| ||||||||||| ||||||||
Sbjct: 443 tagttaaagaagatggtattgtccctcttcgttacgtt-aagtttcagaacgttaacag 386
>gnl|UG|Hs#S15556188 BX402576 Homo sapiens PLACENTA COT
25-NORMALIZED Homo sapiens cDNA clone CS0DI056YA14
5-PRIME, mRNA sequence /clone=CS0DI056YA14 /clone_end=5'
/gb=BX402576 /gi=30618861 /ug=Hs.501153 /len=1201
Length = 1201
Score = 595 bits (300), Expect = e-168
Identities = 660/799 (82%), Gaps = 6/799 (0%)
Strand = Plus / Plus
Query: 94 ggagaagacgccacggtcgccacctcctgtgtccaggcctcggccttcctgagtctaccc 153
||||||||| | ||||||||||||| | |||||||||||||||||||||||| | |
Sbjct: 57 ggagaagactcggcggtcgccacctcttctgtccaggcctcggccttcctgagcatctct 116
Query: 154 ccgtcccctcccgggtcgtcttctccttcagttttgaaaccggtggcgtcgcggccacct 213
|| ||| ||||| | |||||||||||||||||| || | |||||||||||||||||
Sbjct: 117 ccttcctctcccagawcgtcttctccttcagtttcaaagcmagtggcgtcgcggccaccc 176
Query: 214 tgccaggctctctgaga--atggtaggtgtaaagccggtcgggagtgacccggatttcca 271
|||| ||||||||| || ||||| || || ||||| |||||||| ||||||||||||||
Sbjct: 177 tgccgggctctctgtgaggatggtgggggtgaagcccgtcgggagcgacccggatttcca 236
Query: 272 gccggagctgagcggcgcgggctccagactcgctgtggtcaaattcaccatgcgagggtg 331
||| |||||||||||||||||| ||||| |||| |||||||| ||||||||| |||||||
Sbjct: 237 gccagagctgagcggcgcgggcaccagamtcgccgtggtcaagttcaccatgagagggtg 296
Query: 332 tggaccatgtttaaggattgccccagcattcagttctatgagtaataagtatccacaagc 391
||| ||| |||| |||||||||||||| ||||||||||||||||| || | || | ||
Sbjct: 297 tgggccaagtttgaggattgccccagcgttcagttctatgagtaaaaaaaawmcamaggc 356
Query: 392 agttttcttggaagtagatgtacatcagtgtcagggaactgctgccaccaacaacatatc 451
|||||||||||||| || ||| | ||||| |||||| || || ||||| || | |||
Sbjct: 357 tgttttcttggaagtcgaagtamaamagtgtmagggaamagcwgcmaccaamaaaaaatc 416
Query: 452 agcgacacctacatttttgtttttccgaaacaaagtgagaattgatcagtatcaaggagc 511
||| ||||| | |||||||||||| ||||| |||||||||| ||| | ||||||||||
Sbjct: 417 agcaacaccaamatttttgttttttcgaaamaaagtgagaaatgaamaaaatcaaggagc 476
Query: 512 agatgccgtgggattagaagaaaaaatcaagcagcacttagaaaacgaccctggaagcaa 571
|||||| ||||||||||||||||||| ||||||||||| |||||| || || ||||||||
Sbjct: 477 agatgcagtgggattagaagaaaaaaacaagcagcactaagaaaaagamccaggaagcaa 536
Query: 572 tgaggacacagatattccaaaaggctatatggatttaatgccttttattaacaaagctgg 631
|||||| ||||| | ||||||||| | | ||| ||||||||||||||||||||||| ||
Sbjct: 537 tgaggamacagaaaaaccaaaaggcaaaaaggaattaatgccttttattaacaaagcagg 596
Query: 632 ctgtgaatgtcttaatgaaa-gtgacgagcatggatttgacaactgtttacgaaaagaca 690
||||||||||||||||||| || | ||| |||| |||||||||| |||| ||| |||
Sbjct: 597 ttgtgaatgtcttaatgaaaagtratgagaatggttttgacaacttgttactraaaaaca 656
Query: 691 tgaccttcctggaatctga-ttgtgatgaacagctacttattactgtggcattcaatcag 749
||||| |||||||| | |||| || ||| || | |||| |||| ||| | || ||
Sbjct: 657 caaccttyttggaatcttacttgt-attracarcttcytattwctgtkgcaattaaacaa 715
Query: 750 cctgttaagctttactcaatgaaatttcaagggccagataatggtcagggtcctaaatat 809
|| ||||| || | |||||| || |||||||||| || | ||||| || ||| ||
Sbjct: 716 ccykgtaagcsttwttycatgaaaattyaagggccagaaaawkggcagggcccyaaaaat 775
Query: 810 gtaaaaatttttatcaatctaccccgatctatggattttgaagaggcagaaagaagcgaa 869
||||||| |||||| || ||||||||||||||||||||| |||||||||||| || |||
Sbjct: 776 gtaaaaawttttatyaacctaccccgatctatggattttkwagaggcagaaag-agtgaa 834
Query: 870 ccaactcaagctctggaac 888
|||||||||||||||||||
Sbjct: 835 ccaactcaagctctggaac 853
>gnl|UG|Hs#S6119497 UI-H-EU1-baj-n-23-0-UI.s1 NCI_CGAP_Ct1 Homo
sapiens cDNA clone UI-H-EU1-baj-n-23-0-UI 3', mRNA
sequence /clone=UI-H-EU1-baj-n-23-0-UI /clone_end=3'
/gb=CA414219 /gi=24776870 /ug=Hs.420564 /len=748
Length = 748
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 800 tcctaaatatgtaaaaattt 819
||||||||||||||||||||
Sbjct: 359 tcctaaatatgtaaaaattt 378
>gnl|UG|Hs#S4813944 Homo sapiens similar to RIKEN cDNA 4933437K13
(LOC92017), mRNA /cds=(32,1318) /gb=XM_042234
/gi=27486063 /ug=Hs.145047 /len=5697
Length = 5697
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 125 tccaggcctcggccttcctg 144
||||||||||||||||||||
Sbjct: 5178 tccaggcctcggccttcctg 5197
>gnl|UG|Mm#S10862158 Mus musculus 10 days neonate cerebellum cDNA,
RIKEN full-length enriched library, clone:B930056C04
product:unclassifiable, full insert sequence.
/gb=AK047402 /gi=26092149 /ug=Mm.208705 /len=3257
Length = 3257
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 212 cttgccaggctctctgagaa 231
||||||||||||||||||||
Sbjct: 408 cttgccaggctctctgagaa 389
>gnl|UG|Bt#S15223001 Bos taurus SMC1 structural maintenance of
chromosomes 1-like 1 (yeast) (SMC1L1), mRNA
/cds=(1,3702) /gb=NM_174614 /gi=30172565 /ug=Bt.217
/len=3702
Length = 3702
Score = 40.1 bits (20), Expect = 0.20
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 922 ttccacttcgttatgttaaagttt 945
||||||||||||||| ||||||||
Sbjct: 702 ttccacttcgttatgataaagttt 679
>gnl|UG|Hs#S2038970 hj08h10.y1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA
clone IMAGE:2981251 5', mRNA sequence
/clone=IMAGE:2981251 /clone_end=5' /gb=BE041827
/gi=8358880 /ug=Hs.274837 /len=412
Length = 412
Score = 38.2 bits (19), Expect = 0.78
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 389 agcagttttcttggaagta 407
|||||||||||||||||||
Sbjct: 250 agcagttttcttggaagta 268
>gnl|UG|Mm#S11105868 Mus musculus, clone IMAGE:4526881, mRNA
/gb=BC022743 /gi=21961430 /ug=Mm.161726 /len=1355
Length = 1355
Score = 38.2 bits (19), Expect = 0.78
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 880 ctctggaactaacagagga 898
|||||||||||||||||||
Sbjct: 800 ctctggaactaacagagga 818
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: Sep 26, 2003 8:02 PM
Number of letters in database: 258,717,139
Number of sequences in database: 249,856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 162,551
Number of Sequences: 249856
Number of extensions: 162551
Number of successful extensions: 12114
Number of sequences better than 10.0: 28
length of query: 959
length of database: 258,717,139
effective HSP length: 19
effective length of query: 940
effective length of database: 253,969,875
effective search space: 238731682500
effective search space used: 238731682500
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)