Search to UniGene2 database
Query= 20030826C-004651 (20030826C-004651) 20030826C-004651
(1041 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
249,856 sequences; 258,717,139 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Hs#S14812780 Homo sapiens, clone IMAGE:6193025, mRNA, par... 603 e-171
Alignment gnl|UG|Mm#S14302659 Mus musculus RIKEN cDNA 9930021D14 gene (993... 42 0.054
Alignment gnl|UG|Mm#S8762359 Mus musculus G protein beta subunit-like (Gbl... 42 0.054
Alignment gnl|UG|Hs#S3219393 Homo sapiens phosphate regulating gene with h... 40 0.21
Alignment gnl|UG|Mm#S9632305 Mus musculus RIKEN cDNA 1700113K14 gene, mRNA... 40 0.21
Alignment gnl|UG|Bt#S15645034 Bos taurus endothelin converting enzyme 1 (E... 40 0.21
Alignment gnl|UG|Hs#S15637115 Homo sapiens LOC351745 (LOC351745), mRNA /cd... 38 0.85
Alignment gnl|UG|Hs#S4402456 UI-E-EJ1-ajz-c-15-0-UI.r1 UI-E-EJ1 Homo sapie... 38 0.85
Alignment gnl|UG|Hs#S1730954 Homo sapiens C1q-related factor (CRF), mRNA /... 38 0.85
Alignment gnl|UG|Hs#S3602319 Homo sapiens histone deacetylase 10 (HDAC10),... 38 0.85
>gnl|UG|Hs#S14812780 Homo sapiens, clone IMAGE:6193025, mRNA, partial
cds /cds=(1,1693) /gb=BC047921 /gi=28839079 /ug=Hs.174373
/len=2169
Length = 2169
Score = 603 bits (304), Expect = e-171
Identities = 451/500 (90%)
Strand = Plus / Plus
Query: 542 aggacatgaaagctacgtgaccttctgccagctggaggacgaagctgccttcacgtgcag 601
|||||| |||||||| ||||||||||||||||||||||| || ||||||||||| |||||
Sbjct: 724 aggacacgaaagctatgtgaccttctgccagctggaggatgaggctgccttcacatgcag 783
Query: 602 cgctgactgcaccatccggaagtgggacgtgctgaccgggcagtgtctgcaggtgttccg 661
||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 784 cgccgactgcaccatcaggaggtgggacgtgctgaccgggcagtgtctgcaggtgtaccg 843
Query: 662 gggacacacatccattgtgaacaggatcctggtcaccaacaaccagctcttcagcagttc 721
|||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 844 aggacacacgtccatcgtgaacaggatcctggttgccaacaaccagctcttcagcagctc 903
Query: 722 ctatgaccggacagctcgcgcctggagtgtagacaaagggcaggtgtcgcgggagttccg 781
|||||||||||||||||| | ||||||||| ||||| |||||| |||| |||||||||||
Sbjct: 904 ctatgaccggacagctcgggtctggagtgtggacaaggggcagatgtcccgggagttccg 963
Query: 782 gggccaccgcaactgtgtgctgactctagcctactctgccccctgggacctgcctggggc 841
||||||||||||||| |||||||| ||||||||||||||||| |||||||| || | |
Sbjct: 964 gggccaccgcaactgcgtgctgaccctagcctactctgccccgtgggacctccccagcac 1023
Query: 842 tccctgcgtggaggaggccgtggctggggggcttctggtgacgggaagcacagacggcac 901
|||||||| ||||||||||| ||| ||||||||||||||||| || |||||||| |||||
Sbjct: 1024 tccctgcgcggaggaggccgcggccggggggcttctggtgaccggcagcacagatggcac 1083
Query: 902 agccaaggtgtggcaagtggccagtggctgctgccaccagacgctgcggggccacacggg 961
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1084 agccaaggtgtggcaggtggccagcggctgctgccaccagacgctgcggggccacacggg 1143
Query: 962 cgccgtgctctgcctggtgttggacacacctgggcacacagccttcaccggcagcaccga 1021
|| ||||| ||||| ||| | ||||| || || ||||| |||||||| |||||||||||
Sbjct: 1144 tgcagtgctgtgcctagtgctagacacgcccggccacacggccttcacaggcagcaccga 1203
Query: 1022 cgccaccatccgcgcctggg 1041
|||||||||||| |||||||
Sbjct: 1204 cgccaccatccgtgcctggg 1223
Score = 309 bits (156), Expect = 1e-82
Identities = 245/274 (89%), Gaps = 3/274 (1%)
Strand = Plus / Plus
Query: 271 ccccgcgatggccgcgggccgcagcctcagggagctgctgccgcgtgggtgccggggcgc 330
|||||||||||||||||||||||| | | ||||| || |||| || |||||||||
Sbjct: 111 ccccgcgatggccgcgggccgcagtcgtacggagccgc---cgcgcggaccccggggcgc 167
Query: 331 ccctccctagcggggcgcagcctgcgcccggtccccgcccgaccagcggaatggggggcg 390
||||||||||||||||||||| | | ||||||||| ||||||| ||||||||||
Sbjct: 168 ccctccctagcggggcgcagctccttcttgttccccgccctgccagcgggatggggggcg 227
Query: 391 gagggtctgccctgagggtctgcgcggaccaccgcgggggcatcaactggctcagcctga 450
| ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 228 gcgggtcggccctgagggtctgcgccgaccaccgcgggggcatcaactggctgagcctga 287
Query: 451 gccccgacgggcagcgcctgctgacgggcagcgaggacggcaccgcccggctctggagca 510
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 288 gccccgacgggcagcgcctgctgacgggcagcgaggacggcacggcccggctctggagca 347
Query: 511 ccgcggacggccagtgctgcgccctcctgcaagg 544
|||||||||||||||||||||| |||||||||||
Sbjct: 348 ccgcggacggccagtgctgcgcgctcctgcaagg 381
>gnl|UG|Mm#S14302659 Mus musculus RIKEN cDNA 9930021D14 gene
(9930021D14Rik), mRNA /cds=(339,863) /gb=NM_175682
/gi=31342317 /ug=Mm.258355 /len=998
Length = 998
Score = 42.1 bits (21), Expect = 0.054
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 857 ggccgtggctggggggcttct 877
|||||||||||||||||||||
Sbjct: 311 ggccgtggctggggggcttct 331
>gnl|UG|Mm#S8762359 Mus musculus G protein beta subunit-like
(Gbl-pending), mRNA /cds=(99,1079) /gb=NM_019988
/gi=31542884 /ug=Mm.41326 /len=3361
Length = 3361
Score = 42.1 bits (21), Expect = 0.054
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 857 ggccgtggctggggggcttct 877
|||||||||||||||||||||
Sbjct: 2720 ggccgtggctggggggcttct 2700
>gnl|UG|Hs#S3219393 Homo sapiens phosphate regulating gene with
homologies to endopeptidases on the X chromosome
(hypophosphatemia, vitamin D resistant rickets) (PHEX),
transcript variant 1843529, mRNA /cds=(77,2326)
/gb=NM_000444 /gi=10937866 /ug=Hs.72874 /len=2590
Length = 2590
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 694 tcaccaacaaccagctcttc 713
||||||||||||||||||||
Sbjct: 2109 tcaccaacaaccagctcttc 2128
>gnl|UG|Mm#S9632305 Mus musculus RIKEN cDNA 1700113K14 gene, mRNA
(cDNA clone MGC:38609 IMAGE:5355351), complete cds
/cds=(151,1278) /gb=BC023044 /gi=18606193 /ug=Mm.34166
/len=1423
Length = 1423
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 179 cgggtcccccgagtccccga 198
||||||||||||||||||||
Sbjct: 333 cgggtcccccgagtccccga 352
>gnl|UG|Bt#S15645034 Bos taurus endothelin converting enzyme 1 (ECE1),
mRNA /cds=(118,2394) /gb=NM_181009 /gi=31341344
/ug=Bt.4378 /len=2889
Length = 2889
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 694 tcaccaacaaccagctcttc 713
||||||||||||||||||||
Sbjct: 2180 tcaccaacaaccagctcttc 2199
>gnl|UG|Hs#S15637115 Homo sapiens LOC351745 (LOC351745), mRNA
/cds=(1,1377) /gb=XM_305098 /gi=30149103 /ug=Hs.457314
/len=1377
Length = 1377
Score = 38.2 bits (19), Expect = 0.85
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 830 cctgcctggggctccctgc 848
|||||||||||||||||||
Sbjct: 1243 cctgcctggggctccctgc 1261
>gnl|UG|Hs#S4402456 UI-E-EJ1-ajz-c-15-0-UI.r1 UI-E-EJ1 Homo sapiens
cDNA clone UI-E-EJ1-ajz-c-15-0-UI 5', mRNA sequence
/clone=UI-E-EJ1-ajz-c-15-0-UI /clone_end=5' /gb=BQ187114
/gi=20362665 /ti=151810197 /ug=Hs.442685 /len=1104
Length = 1104
Score = 38.2 bits (19), Expect = 0.85
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 105 cctccgctggagggactga 123
|||||||||||||||||||
Sbjct: 222 cctccgctggagggactga 204
>gnl|UG|Hs#S1730954 Homo sapiens C1q-related factor (CRF), mRNA
/cds=(14,790) /gb=NM_006688 /gi=5729784 /ug=Hs.134012
/len=1297
Length = 1297
Score = 38.2 bits (19), Expect = 0.85
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 259 ccggcgccggggccccgcg 277
|||||||||||||||||||
Sbjct: 141 ccggcgccggggccccgcg 123
>gnl|UG|Hs#S3602319 Homo sapiens histone deacetylase 10 (HDAC10),
mRNA /cds=(354,2363) /gb=NM_032019 /gi=20070353
/ug=Hs.26593 /len=2420
Length = 2420
Score = 38.2 bits (19), Expect = 0.85
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 823 cctgggacctgcctggggc 841
|||||||||||||||||||
Sbjct: 261 cctgggacctgcctggggc 243
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: Sep 26, 2003 8:02 PM
Number of letters in database: 258,717,139
Number of sequences in database: 249,856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 160,680
Number of Sequences: 249856
Number of extensions: 160680
Number of successful extensions: 12508
Number of sequences better than 10.0: 33
length of query: 1041
length of database: 258,717,139
effective HSP length: 19
effective length of query: 1022
effective length of database: 253,969,875
effective search space: 259557212250
effective search space used: 259557212250
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)