>20040204C-001938 (20040204C-001938) 20040204C-001938 TTCGTGTAGG GGAGGCTGGA AGCCGCAGGA GCGGGAGACG GTGGAGGGGA TTTTGAGAAG AAAACTGCGG TAGCGACCTC ACTCGGTGGT ACAAGAGGGG AACGCTAGTC CCTCCGAAAG CCGGGTTACT GCGAACGCAC CAGCTGAGCC CTTAGTACTG CAACCCCCAC CCTCCTTTGG TTTGTGGAGG AGCCTGACCA CTCTGCCTCT TATGGCCACA ATGCTGACCG CCCGCCTCTC CAGACCCCTG TCGCAGCTCC CAAGGAAAAC CCTGAATTTC TCTGAGAGAG AAAATGGAGC AAGAGGCTCG CTGCTGTTTT ACTCTCCCTC CTTTGTCCCT GGCAGCCGTC GGACTTATGC TGATTCGGTG AACCCGGTTG GCAGCAAAGC TGTCCTGGTC ACAGGCTGTG ACTCTGGATT TGGGTTCTCA CTGGCCAAGC ATCTGCATTC AAAAGGCTTC CTTGTATTTG CTGGCTGCTT GATGAAGGAC AAAGGGCATG ACGGGGTCAA GGAACTGGAC AGCTTGAAGA GTGATCGATT AAGAACCGTC CAGCTCAATG TCTGCAAAAG TGAAGAAGTA GAGAAAGTGG TGGAGACCAT CCGCTCGAGC TTGCAGGACC CTGAGAAAGG CTTGTGGGGC CTGGTTAACA ATGCAGGCAT CTCAACGTTC GGGGACGTGG AATTCACCAG CATGGAGACC TACAAGGAGG TGGCAGAAGT GAACCTCTGG GGCACGGTGC GGGTGACAAA ATCTTTTCTC CCTCTCATCC GGAGGGCCAA AGGCCGCGTG GTCAACATCA GCAGCATAAT GGGCGCTTGG CCAATGTGAG CCGCTCCCCC TACTGCATCA CCAAGTTCGG GGTGGAGGCT TTCTCTGACT GCCTGCGCTA CGAGATGCAC CCTCTAGGAG TGAAGGTCAG CGTGGTGGAG CCCGGCAACT TCATCGTCGC CACCAGCCTC TACAGCCCTG AGCGCATCCG GGCCATCGCC ACTAAGATGT GGGAGCAGGT GCCCGAGACG GTGCGTCAAG ACTACGGCAG GAAGTACTTT GATGAGATGG TCGCCAGGAT GGAGAACTTC TGCAACAGCG GCTCCACGGA CACGTCTCCC GTCATCAATG CTGTCACCCA CGCCCTGACC TCCACCACCC CCTACACTCG CTACCACCCC ATGGACTA
Query= 20040204C-001938 (20040204C-001938) 20040204C-001938
(1178 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
238,354 sequences; 272,110,533 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Ssc#S18304983 BP442645 full-length enriched swine cDNA li... 1542 0.0
Alignment gnl|UG|Hs#S4001852 Homo sapiens 3-hydroxybutyrate dehydrogenase ... 910 0.0
Alignment gnl|UG|Mm#S14303005 Mus musculus 3-hydroxybutyrate dehydrogenase... 626 e-178
Alignment gnl|UG|Ssc#S6090025 Sus scrofa hydroxysteroid 11-beta dehydrogen... 44 0.016
Alignment gnl|UG|Hs#S3438424 Homo sapiens calcium channel, voltage-depende... 40 0.26
Alignment gnl|UG|Mm#S8885426 602025543F1 NCI_CGAP_Li9 Mus musculus cDNA cl... 40 0.26
Alignment gnl|UG|Mm#S8539592 Mus musculus retinol dehydrogenase 7 (Rdh7), ... 40 0.26
Alignment gnl|UG|Mm#S8761375 Mus musculus CRAD-2 mRNA for cis-retinol/andr... 40 0.26
Alignment gnl|UG|Hs#S1495012 wh51a07.x1 NCI_CGAP_Kid11 Homo sapiens cDNA c... 38 1.0
Alignment gnl|UG|Hs#S4808558 Homo sapiens orphan short-chain dehydrogenase... 38 1.0
>gnl|UG|Ssc#S18304983 BP442645 full-length enriched swine cDNA
library, adult liver Sus scrofa cDNA clone LVR010026B11
5', mRNA sequence /clone=LVR010026B11 /clone_end=5'
/gb=BP442645 /gi=40432712 /ug=Ssc.2997 /len=874
Length = 874
Score = 1542 bits (778), Expect = 0.0
Identities = 781/782 (99%)
Strand = Plus / Plus
Query: 1 ttcgtgtaggggaggctggaagccgcaggagcgggagacggtggaggggattttgagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcgtgtaggggaggctggaagccgcaggagcgggagacggtggaggggattttgagaag 60
Query: 61 aaaactgcggtagcgacctcactcggtggtacaagaggggaacgctagtccctccgaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaactgcggtagcgacctcactcggtggtacaagaggggaacgctagtccctccgaaag 120
Query: 121 ccgggttactgcgaacgcaccagctgagcccttagtactgcaacccccaccctcctttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgggttactgcgaacgcaccagctgagcccttagtactgcaacccccaccctcctttgg 180
Query: 181 tttgtggaggagcctgaccactctgcctcttatggccacaatgctgaccgcccgcctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgtggaggagcctgaccactctgcctcttatggccacaatgctgaccgcccgcctctc 240
Query: 241 cagacccctgtcgcagctcccaaggaaaaccctgaatttctctgagagagaaaatggagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagacccctgtcgcagctcccaaggaaaaccctgaatttctctgagagagaaaatggagc 300
Query: 301 aagaggctcgctgctgttttactctccctcctttgtccctggcagccgtcggacttatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaggctcgctgctgttttactctccctcctttgtccctggcagccgtcggacttatgc 360
Query: 361 tgattcggtgaacccggttggcagcaaagctgtcctggtcacaggctgtgactctggatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgattcggtgaacccggttggcagcaaagctgtcctggtcacaggctgtgactctggatt 420
Query: 421 tgggttctcactggccaagcatctgcattcaaaaggcttccttgtatttgctggctgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgggttctcactggccaagcatctgcattcaaaaggcttccttgtatttgctggctgctt 480
Query: 481 gatgaaggacaaagggcatgacggggtcaaggaactggacagcttgaagagtgatcgatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatgaaggacaaagggcatgacggggtcaaggaactggacagcttgaagagtgatcgatt 540
Query: 541 aagaaccgtccagctcaatgtctgcaaaagtgaagaagtagagaaagtggtggagaccat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagaaccgtccagctcaatgtctgcaaaagtgaagaagtagagaaagtggtggagaccat 600
Query: 601 ccgctcgagcttgcaggaccctgagaaaggcttgtggggcctggttaacaatgcaggcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccgctcgagcttgcaggaccctgagaaaggcttgtggggcctggttaacaatgcaggcat 660
Query: 661 ctcaacgttcggggacgtggaattcaccagcatggagacctacaaggaggtggcagaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctcaacgttcggggacgtggaattcaccagcatggagacctacaaggaggtggcagaagt 720
Query: 721 gaacctctggggcacggtgcgggtgacaaaatcttttctccctctcatccggagggccaa 780
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 721 gaacctctggggcacggtgcgggtgacaaaatcctttctccctctcatccggagggccaa 780
Query: 781 ag 782
||
Sbjct: 781 ag 782
>gnl|UG|Hs#S4001852 Homo sapiens 3-hydroxybutyrate dehydrogenase
(heart, mitochondrial) (BDH), nuclear gene encoding
mitochondrial protein, mRNA /cds=(251,1282) /gb=NM_004051
/gi=34304349 /ug=Hs.434560 /len=1621
Length = 1621
Score = 910 bits (459), Expect = 0.0
Identities = 742/835 (88%), Gaps = 1/835 (0%)
Strand = Plus / Plus
Query: 345 gccgtcggacttatgctgattcggtgaacccggttggcagcaaagctgtcctggtcacag 404
|||||||||||||||| | ||| | | |||||||||||||||||||||||||||||||
Sbjct: 375 gccgtcggacttatgccagtgcggcggagccggttggcagcaaagctgtcctggtcacag 434
Query: 405 gctgtgactctggatttgggttctcactggccaagcatctgcattcaaaaggcttccttg 464
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 435 gctgtgactctggatttgggttctcattggccaagcatctgcattcaaaaggcttccttg 494
Query: 465 tatttgctggctgcttgatgaaggacaaagggcatgacggggtcaaggaactggacagct 524
| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 495 tgtttgctggctgcttgatgaaggacaaaggccatgatggggtcaaggagctggacagcc 554
Query: 525 tgaagagtgatcgattaagaaccgtccagctcaatgtctgcaaaagtgaagaagtagaga 584
| || ||||| ||||| ||||||||||||||||||||||||| || ||||| || ||||
Sbjct: 555 taaacagtgaccgattgagaaccgtccagctcaatgtctgcagcagcgaagaggtggaga 614
Query: 585 aagtggtggagaccatccgctcgagcttgcaggaccctgagaaaggcttgtggggcctgg 644
|||||||||||| ||||||||||| || ||||||||||||||||| |||||||||| |
Sbjct: 615 aagtggtggagattgtccgctcgagcctgaaggaccctgagaaaggcatgtggggcctcg 674
Query: 645 ttaacaatgcaggcatctcaacgttcggggacgtggaattcaccagcatggagacctaca 704
|||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||
Sbjct: 675 ttaacaatgccggcatctcaacgttcggggaggtggagttcaccagcctggagacctaca 734
Query: 705 aggaggtggcagaagtgaacctctggggcacggtgcgggtgacaaaatcttttctccctc 764
|| ||||||||||||||||||| |||||||| |||||| |||| ||||| |||||||| |
Sbjct: 735 agcaggtggcagaagtgaacctttggggcacagtgcggatgacgaaatcctttctccccc 794
Query: 765 tcatccggagggccaaaggccgcgtggtcaacatcagcagcataatggg-cgcttggcca 823
||||||| ||||||||||||||||| ||||| ||||||||||| |||| ||| ||||||
Sbjct: 795 tcatccgaagggccaaaggccgcgtcgtcaatatcagcagcatgctgggccgcatggcca 854
Query: 824 atgtgagccgctccccctactgcatcaccaagttcggggtggaggctttctctgactgcc 883
| | ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 855 acccggcccgctccccgtactgcatcaccaagttcggggtagaggctttctcggactgcc 914
Query: 884 tgcgctacgagatgcaccctctaggagtgaaggtcagcgtggtggagcccggcaacttca 943
||||||| |||||| |||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 915 tgcgctatgagatgtaccccctgggcgtgaaggtcagcgtggtggagcccggcaacttca 974
Query: 944 tcgtcgccaccagcctctacagccctgagcgcatccgggccatcgccactaagatgtggg 1003
||| ||||||||||| |||||||||||| |||| | ||||||||||| ||||||||||
Sbjct: 975 tcgctgccaccagcctttacagccctgagagcattcaggccatcgccaagaagatgtggg 1034
Query: 1004 agcaggtgcccgagacggtgcgtcaagactacggcaggaagtactttgatgagatggtcg 1063
|| || |||| ||| ||||| | |||||||||| ||||||||||||||| | | |||
Sbjct: 1035 aggagctgcctgaggtcgtgcgcaaggactacggcaagaagtactttgatgaaaagatcg 1094
Query: 1064 ccaggatggagaacttctgcaacagcggctccacggacacgtctcccgtcatcaatgctg 1123
||| |||||||| || ||||| ||| |||||||| |||||||| || |||||| ||||||
Sbjct: 1095 ccaagatggagacctactgcagcagtggctccacagacacgtcccctgtcatcgatgctg 1154
Query: 1124 tcacccacgccctgacctccaccaccccctacactcgctaccaccccatggacta 1178
|||| |||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 1155 tcacacacgccctgaccgccaccaccccctacacccgctaccaccccatggacta 1209
Score = 71.9 bits (36), Expect = 7e-11
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 221 atgctgaccgcccgcctctccagacccctgtcgcagctcccaaggaaaaccctgaatttc 280
|||||| || |||||||||||||||||||||| | ||||||| | |||||||| | | |
Sbjct: 251 atgctggccacccgcctctccagacccctgtcacggctcccaggaaaaaccctaagtgcc 310
Query: 281 tctgagagagaaaatggagcaaga 304
| ||| ||||||||||||||||||
Sbjct: 311 tgtgatagagaaaatggagcaaga 334
>gnl|UG|Mm#S14303005 Mus musculus 3-hydroxybutyrate dehydrogenase
(heart, mitochondrial) (Bdh), mRNA /cds=(263,1294)
/gb=NM_175177 /gi=31982168 /ug=Mm.293470 /len=1734
Length = 1734
Score = 626 bits (316), Expect = e-178
Identities = 677/796 (85%), Gaps = 1/796 (0%)
Strand = Plus / Plus
Query: 384 gcaaagctgtcctggtcacaggctgtgactctggatttgggttctcactggccaagcatc 443
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gcaaagctatcctgatcacaggctgtgactctggatttgggttctcactggccaagcatc 485
Query: 444 tgcattcaaaaggcttccttgtatttgctggctgcttgatgaaggacaaagggcatgacg 503
|||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||| |
Sbjct: 486 tgcactcaaaaggcttccttgtatttgctggctgtttgatgaaggacaaaggtgatgctg 545
Query: 504 gggtcaaggaactggacagcttgaagagtgatcgattaagaaccgtccagctcaatgtct 563
||||||||||||||||||||||||||||||| ||| | |||||| |||||||||||||||
Sbjct: 546 gggtcaaggaactggacagcttgaagagtgaccgactgagaaccatccagctcaatgtct 605
Query: 564 gcaaaagtgaagaagtagagaaagtggtggagaccatccgctcgagcttgcaggaccctg 623
|||| |||||||| || ||||| | ||||||||| |||||||| || || | || ||||
Sbjct: 606 gcaacagtgaagaggtggagaaggcggtggagacgatccgctccggcctgaaagatcctg 665
Query: 624 agaaaggcttgtggggcctggttaacaatgcaggcatctcaacgttcggggacgtggaat 683
|||| || ||||||||||||||||||| ||||||||||||||||| ||||| ||||| |
Sbjct: 666 agaagggaatgtggggcctggttaacaacgcaggcatctcaacgtttggggaggtggagt 725
Query: 684 tcaccagcatggagacctacaaggaggtggcagaagtgaacctctggggcacggtgcggg 743
|||||||||||||||| || ||||||||||| ||||||||||||||||| || |||||
Sbjct: 726 tcaccagcatggagacatataaggaggtggctgaagtgaacctctggggaaccgtgcgca 785
Query: 744 tgacaaaatcttttctccctctcatccggagggccaaaggccgcgtggtcaacatcagca 803
|||||||| || || || || |||| || |||||||| ||||| || ||||||||||
Sbjct: 786 ccacaaaatccttccttccccttctccgaagagccaaaggtcgcgtcgttaacatcagca 845
Query: 804 gcataatggg-cgcttggccaatgtgagccgctccccctactgcatcaccaagttcgggg 862
|||| |||| ||| ||||||| |||||| || ||||||||||||||||| ||||
Sbjct: 846 gcatgctgggccgcatggccaaccccgcccgctcgccatactgcatcaccaagtttgggg 905
Query: 863 tggaggctttctctgactgcctgcgctacgagatgcaccctctaggagtgaaggtcagcg 922
| ||||||||||| |||||||||||||| |||||||||||||| || || |||||||| |
Sbjct: 906 tcgaggctttctcggactgcctgcgctatgagatgcaccctctgggtgtcaaggtcagtg 965
Query: 923 tggtggagcccggcaacttcatcgtcgccaccagcctctacagccctgagcgcatccggg 982
||||||| || ||||||||||| | |||||||| ||||||||||| |||||||||| ||
Sbjct: 966 tggtggaacctggcaacttcatagcggccaccagtctctacagccccgagcgcatccagg 1025
Query: 983 ccatcgccactaagatgtgggagcaggtgcccgagacggtgcgtcaagactacggcagga 1042
||||||||| ||||||||||| | |||| ||| || || | ||||| |||||||
Sbjct: 1026 ccatcgccaagaagatgtgggatgacctgcctgaggtcgtccgcaaggactatggcagga 1085
Query: 1043 agtactttgatgagatggtcgccaggatggagaacttctgcaacagcggctccacggaca 1102
||||||| ||||| | | | |||| |||||| | || |||||||||||| ||||| || |
Sbjct: 1086 agtacttcgatgaaaagattgccaagatggaaacctactgcaacagcggttccacagata 1145
Query: 1103 cgtctcccgtcatcaatgctgtcacccacgccctgacctccaccaccccctacactcgct 1162
| || | |||||||| |||||||| |||||| ||||| || ||||||| || || ||||
Sbjct: 1146 cttcctctgtcatcaacgctgtcacacacgccttgaccgccgccaccccgtatacccgct 1205
Query: 1163 accaccccatggacta 1178
|||| |||||||||||
Sbjct: 1206 accatcccatggacta 1221
Score = 50.1 bits (25), Expect = 3e-04
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 230 gcccgcctctccagacccctgtcgcagctccca 262
||||| ||||||||||||||||| |||||||||
Sbjct: 272 gcccgtctctccagacccctgtcacagctccca 304
>gnl|UG|Ssc#S6090025 Sus scrofa hydroxysteroid 11-beta dehydrogenase
2 mRNA, complete cds /cds=(66,1268) /gb=AF374414
/gi=20385594 /ug=Ssc.2635 /len=1386
Length = 1386
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 633 tgtggggcctggttaacaatgcaggc 658
||||||||||||| ||||||||||||
Sbjct: 547 tgtggggcctggtcaacaatgcaggc 572
>gnl|UG|Hs#S3438424 Homo sapiens calcium channel, voltage-dependent,
P/Q type, alpha 1A subunit (CACNA1A), transcript variant
2, mRNA /cds=(283,7800) /gb=NM_023035 /gi=13386497
/ug=Hs.400460 /len=7812
Length = 7812
Score = 40.1 bits (20), Expect = 0.26
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 703 caaggaggtggcagaagtga 722
||||||||||||||||||||
Sbjct: 2511 caaggaggtggcagaagtga 2530
>gnl|UG|Mm#S8885426 602025543F1 NCI_CGAP_Li9 Mus musculus cDNA clone
IMAGE:4160650 5'. /clone=IMAGE:4160650 /clone_end=5'
/gb=BF235615 /gi=11148373 /ti=44439922 /ug=Mm.314947
/len=1721
Length = 1721
Score = 40.1 bits (20), Expect = 0.26
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 635 tggggcctggttaacaatgcaggcatct 662
||||||||||| |||||||| |||||||
Sbjct: 508 tggggcctggtcaacaatgctggcatct 535
Score = 36.2 bits (18), Expect = 4.0
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 399 tcacaggctgtgactctggatttggg 424
|||| |||||||||||||| ||||||
Sbjct: 290 tcacgggctgtgactctggctttggg 315
>gnl|UG|Mm#S8539592 Mus musculus retinol dehydrogenase 7 (Rdh7),
mRNA /cds=(98,1048) /gb=NM_017473 /gi=8567341
/ug=Mm.301265 /len=1612
Length = 1612
Score = 40.1 bits (20), Expect = 0.26
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 635 tggggcctggttaacaatgcaggcatct 662
||||||||||| |||||||| |||||||
Sbjct: 416 tggggcctggtcaacaatgctggcatct 443
Score = 36.2 bits (18), Expect = 4.0
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 399 tcacaggctgtgactctggatttggg 424
|||| |||||||||||||| ||||||
Sbjct: 198 tcacgggctgtgactctggctttggg 223
>gnl|UG|Mm#S8761375 Mus musculus CRAD-2 mRNA for
cis-retinol/androgen dehydrogenase type 2, complete cds.
/cds=(1,951) /gb=AB032058 /gi=9664091 /ug=Mm.6696
/len=1473
Length = 1473
Score = 40.1 bits (20), Expect = 0.26
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 635 tggggcctggttaacaatgcaggcatct 662
||||||||||| |||||||| |||||||
Sbjct: 319 tggggcctggtcaacaatgctggcatct 346
Score = 36.2 bits (18), Expect = 4.0
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 399 tcacaggctgtgactctggatttggg 424
|||| |||||||||||||| ||||||
Sbjct: 101 tcacgggctgtgactctggctttggg 126
>gnl|UG|Hs#S1495012 wh51a07.x1 NCI_CGAP_Kid11 Homo sapiens cDNA
clone IMAGE:2384244 3' similar to contains LOR1.b2 LOR1
LOR1 repetitive element ;, mRNA sequence
/clone=IMAGE:2384244 /clone_end=3' /gb=AI830424
/gi=5451095 /ug=Hs.470217 /len=487
Length = 487
Score = 38.2 bits (19), Expect = 1.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 50 attttgagaagaaaactgc 68
|||||||||||||||||||
Sbjct: 54 attttgagaagaaaactgc 72
>gnl|UG|Hs#S4808558 Homo sapiens orphan short-chain dehydrogenase /
reductase (SDR-O), mRNA /cds=(1,942) /gb=NM_148897
/gi=22507404 /ug=Hs.380178 /len=942
Length = 942
Score = 38.2 bits (19), Expect = 1.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 399 tcacaggctgtgactctgg 417
|||||||||||||||||||
Sbjct: 89 tcacaggctgtgactctgg 107
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: Jan 30, 2004 10:32 AM
Number of letters in database: 272,110,533
Number of sequences in database: 238,354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 191,482
Number of Sequences: 238354
Number of extensions: 191482
Number of successful extensions: 14533
Number of sequences better than 10.0: 54
length of query: 1178
length of database: 272,110,533
effective HSP length: 19
effective length of query: 1159
effective length of database: 267,581,807
effective search space: 310127314313
effective search space used: 310127314313
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)