>20040204C-004566 (20040204C-004566) 20040204C-004566 TTTTTTCCTC GCCTCTCGTT TCCCCCCTCC CATCCCGTTT CCTCGGCCGC TCCGCTCCCT GGCGTGACTC GGCACTGAGA GCCCCGGGAG AAGACGCCAC GGTCGCCACC TCCTGTGTCC AGGCCTCGGC CTTCCTGAGT CTACCCCCGT CCCCTCCCGG GTCGTCTTCT CCTTCAGTTT TGAAACCGGT GGCGTCGCGG CCACCTTGCC AGGCTCTCTG AGAATGGTAG GTGTAAAGCC GGTCGGGAGT GACCCGGATT TCCAGCCGGA GCTGAGCGGC GCGGGCTCCA GACTCGCTGT GGTCAAATTC ACCATGCGAG GGTGTGGACC ATGTTTAAGG ATTGCCCCAG CATTCAGTTC TATGAGTAAT AAGTATCCAC AAGCAGTTTT CTTGGAAGTA GATGTACATC AGTGTCAGGG AACTGCTGCC ACCAACAACA TATCAGCGAC ACCTACATTT TTGTTTTTCC GAAACAAAGT GAGAATTGAT CAGTATCAAG GAGCAGATGC CGTGGGATTA GAAGAAAAAA TCAAGCAGCA CTTAGAAAAC GACCCTGGAA GCAATGAGGA CACAGATATT CCAAAAGGCT ATATGGATTT AATGCCTTTT ATTAACAAAG CTGGCTGTGA ATGTCTTAAT GAAAGTGACG AGCATGGATT TGACAACTGT TTACGAAAAG ACATGACCTT CCTGGAATCT GATTGTGATG AACAGCTACT TATTACTGTG GCATTCAATC AGCCTGTTAA GCTTTACTCA ATGAAATTTC AAGGGCCAGA TAATGGTCAG GGTCCTAAAT ATGTAAAAAT TTTTATCAAT CTACCCCGAT CTATGGATTT TGAAGAGGCA GAAAGAAGCG AACCAACTCA AGCTCTGGAA CTAACAGAGG ATGATATTAA AGAAGATGGT ATTGTTCCAC TTCGTTATGT TAAAGTTTCA GAATGTTAAC AG
Query= 20040204C-004566 (20040204C-004566) 20040204C-004566
(952 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
238,354 sequences; 272,110,533 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Ssc#S18262440 BP158931 full-length enriched swine cDNA li... 1614 0.0
Alignment gnl|UG|Hs#S1729344 Homo sapiens thioredoxin-like, 32kDa (TXNL), ... 1277 0.0
Alignment gnl|UG|Mm#S8539445 Mus musculus thioredoxin-like (Txnl), mRNA /c... 952 0.0
Alignment gnl|UG|Bt#S12372634 OTM602700301.R1 CSEQFXL05 stomach-rumen Bos ... 680 0.0
Alignment gnl|UG|Hs#S6119497 UI-H-EU1-baj-n-23-0-UI.s1 NCI_CGAP_Ct1 Homo s... 40 0.21
Alignment gnl|UG|Hs#S4284383 Homo sapiens mRNA for FLJ00143 protein. /cds=... 40 0.21
Alignment gnl|UG|Mm#S10862158 Mus musculus 10 days neonate cerebellum cDNA... 40 0.21
Alignment gnl|UG|Bt#S15223001 Bos taurus SMC1 structural maintenance of ch... 40 0.21
Alignment gnl|UG|Hs#S2038970 hj08h10.y1 Soares_NFL_T_GBC_S1 Homo sapiens c... 38 0.81
Alignment gnl|UG|Hs#S15970711 Homo sapiens protein kinase, AMP-activated, ... 38 0.81
>gnl|UG|Ssc#S18262440 BP158931 full-length enriched swine cDNA
library, adult spleen Sus scrofa cDNA clone SPL010035G08
5', mRNA sequence /clone=SPL010035G08 /clone_end=5'
/gb=BP158931 /gi=40408404 /ug=Ssc.4829 /len=819
Length = 819
Score = 1614 bits (814), Expect = 0.0
Identities = 817/818 (99%)
Strand = Plus / Plus
Query: 32 atcccgtttcctcggccgctccgctccctggcgtgactcggcactgagagccccgggaga 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atcccgtttcctcggccgctccgctccctggcgtgactcggcactgagagccccgggaga 61
Query: 92 agacgccacggtcgccacctcctgtgtccaggcctcggccttcctgagtctacccccgtc 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agacgccacggtcgccacctcctgtgtccaggcctcggccttcctgagtctacccccgtc 121
Query: 152 ccctcccgggtcgtcttctccttcagttttgaaaccggtggcgtcgcggccaccttgcca 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ccctcccgggtcgtcttctccttcagttttgaaaccggtggcgtcgcggccaccttgcca 181
Query: 212 ggctctctgagaatggtaggtgtaaagccggtcgggagtgacccggatttccagccggag 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggctctctgagaatggtaggtgtaaagccggtcgggagtgacccggatttccagccggag 241
Query: 272 ctgagcggcgcgggctccagactcgctgtggtcaaattcaccatgcgagggtgtggacca 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctgagcggcgcgggctccagactcgctgtggtcaaattcaccatgcgagggtgtggacca 301
Query: 332 tgtttaaggattgccccagcattcagttctatgagtaataagtatccacaagcagttttc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgtttaaggattgccccagcattcagttctatgagtaataagtatccacaagcagttttc 361
Query: 392 ttggaagtagatgtacatcagtgtcagggaactgctgccaccaacaacatatcagcgaca 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttggaagtagatgtacatcagtgtcagggaactgctgccaccaacaacatatcagcgaca 421
Query: 452 cctacatttttgtttttccgaaacaaagtgagaattgatcagtatcaaggagcagatgcc 511
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 422 cctacatttttgtttttccgaaacaaagtgaggattgatcagtatcaaggagcagatgcc 481
Query: 512 gtgggattagaagaaaaaatcaagcagcacttagaaaacgaccctggaagcaatgaggac 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtgggattagaagaaaaaatcaagcagcacttagaaaacgaccctggaagcaatgaggac 541
Query: 572 acagatattccaaaaggctatatggatttaatgccttttattaacaaagctggctgtgaa 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 acagatattccaaaaggctatatggatttaatgccttttattaacaaagctggctgtgaa 601
Query: 632 tgtcttaatgaaagtgacgagcatggatttgacaactgtttacgaaaagacatgaccttc 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgtcttaatgaaagtgacgagcatggatttgacaactgtttacgaaaagacatgaccttc 661
Query: 692 ctggaatctgattgtgatgaacagctacttattactgtggcattcaatcagcctgttaag 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ctggaatctgattgtgatgaacagctacttattactgtggcattcaatcagcctgttaag 721
Query: 752 ctttactcaatgaaatttcaagggccagataatggtcagggtcctaaatatgtaaaaatt 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ctttactcaatgaaatttcaagggccagataatggtcagggtcctaaatatgtaaaaatt 781
Query: 812 tttatcaatctaccccgatctatggattttgaagaggc 849
||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tttatcaatctaccccgatctatggattttgaagaggc 819
>gnl|UG|Hs#S1729344 Homo sapiens thioredoxin-like, 32kDa (TXNL),
mRNA /cds=(206,1075) /gb=NM_004786 /gi=4759273
/ug=Hs.114412 /len=1285
Length = 1285
Score = 1277 bits (644), Expect = 0.0
Identities = 851/915 (93%), Gaps = 5/915 (0%)
Strand = Plus / Plus
Query: 41 cctcggccgctccgc-tccctggcgtgactcggcactgagagccccgggagaagacgcca 99
||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 21 cctcggccgctccgcgtccctggcgtgactcggcactgagagtcccgggagaagactcgg 80
Query: 100 cggtcgccacctcctgtgtccaggcctcggccttcctgagtctacccccgtcccctcccg 159
||||||| ||||| | |||||||||||||||||||||||| | | || ||| |||||
Sbjct: 81 cggtcgc-acctcttctgtccaggcctcggccttcctgagcatctctccttcctctccca 139
Query: 160 ggtcgtcttctccttcagttttgaaaccggtggcgtcgcggccaccttgccaggctctct 219
| ||||||||||||||||||| || || ||||||||||||||||| |||| ||||||||
Sbjct: 140 gatcgtcttctccttcagtttcaaagccagtggcgtcgcggccaccctgccgggctctct 199
Query: 220 gaga--atggtaggtgtaaagccggtcgggagtgacccggatttccagccggagctgagc 277
| || ||||| || || ||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 200 gtgaggatggtgggggtgaagcccgtcgggagcgacccggatttccagccagagctgagc 259
Query: 278 ggcgcgggctccagactcgctgtggtcaaattcaccatgcgagggtgtggaccatgttta 337
|||||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||
Sbjct: 260 ggcgcgggctccagactcgccgtggtcaagttcaccatgagagggtgtgggccatgtttg 319
Query: 338 aggattgccccagcattcagttctatgagtaataagtatccacaagcagttttcttggaa 397
||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct: 320 aggattgccccagcattcagttctatgagtaataaatatccacaggctgttttcttggaa 379
Query: 398 gtagatgtacatcagtgtcagggaactgctgccaccaacaacatatcagcgacacctaca 457
|| ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 380 gtcgatgtacatcagtgtcagggaacagctgccaccaacaatatatcagcaacacctaca 439
Query: 458 tttttgtttttccgaaacaaagtgagaattgatcagtatcaaggagcagatgccgtggga 517
||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 440 tttttgttttttcgaaacaaagtgagaattgatcaatatcaaggagcagatgctgtggga 499
Query: 518 ttagaagaaaaaatcaagcagcacttagaaaacgaccctggaagcaatgaggacacagat 577
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 500 ttagaagaaaaaatcaagcagcacttagaaaatgaccctggaagcaatgaggacacagat 559
Query: 578 attccaaaaggctatatggatttaatgccttttattaacaaagctggctgtgaatgtctt 637
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 560 attccaaaaggctatatggatttaatgccttttattaacaaagctggttgtgaatgtctt 619
Query: 638 aatgaaagtgacgagcatggatttgacaactgtttacgaaaagacatgaccttcctggaa 697
||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 620 aatgaaagtgatgagcatggatttgacaactgtttacgaaaagacacaaccttcttggaa 679
Query: 698 tctgattgtgatgaacagctacttattactgtggcattcaatcagcctgttaagctttac 757
||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 680 tctgactgtgatgaacagctgcttattactgtggcattcaatcaacctgttaagctttat 739
Query: 758 tcaatgaaatttcaagggccagataatggtcagggtcctaaatatgtaaaaatttttatc 817
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 740 tccatgaaatttcaagggccagataatggtcagggccctaaatatgtaaaaatttttatc 799
Query: 818 aatctaccccgatctatggattttgaagaggcagaaagaagcgaaccaactcaagctctg 877
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 800 aacctaccccgatctatggattttgaagaggcagaaagaagtgaaccaactcaagctctg 859
Query: 878 gaactaacagaggatgatattaaagaagatggtattgttccacttcgttatgttaaagtt 937
||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 860 gaactgacagaggatgatattaaagaagatggcattgttccacttcgttatgtt-aagtt 918
Query: 938 tcagaatgttaacag 952
|||||||||||||||
Sbjct: 919 tcagaatgttaacag 933
>gnl|UG|Mm#S8539445 Mus musculus thioredoxin-like (Txnl), mRNA
/cds=(188,1057) /gb=NM_016792 /gi=31543901 /ug=Mm.19169
/len=2561
Length = 2561
Score = 952 bits (480), Expect = 0.0
Identities = 709/783 (90%), Gaps = 3/783 (0%)
Strand = Plus / Plus
Query: 172 cttcagttttgaaaccggtggcgtcgcggccaccttgccaggctctctgaga--atggta 229
|||||||||||| |||| ||||||||||| || |||| ||||||||| || |||||
Sbjct: 134 cttcagttttgaggccggaagcgtcgcggccgccctgccgggctctctgtgaggatggtg 193
Query: 230 ggtgtaaagccggtcgggagtgacccggatttccagccggagctgagcggcgcgggctcc 289
|| || |||||||||||||| || || ||||||||||||||||||||||| |||||||||
Sbjct: 194 ggagtgaagccggtcgggagcgatccagatttccagccggagctgagcggggcgggctcc 253
Query: 290 agactcgctgtggtcaaattcaccatgcgagggtgtggaccatgtttaaggattgcccca 349
||||| || |||||||| ||||||||| ||||||||||||| ||| | ||||||||||
Sbjct: 254 agacttgccgtggtcaagttcaccatgagagggtgtggaccgtgtcttcggattgccccg 313
Query: 350 gcattcagttctatgagtaataagtatccacaagcagttttcttggaagtagatgtacat 409
|| ||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||| |||
Sbjct: 314 gcgttcagctctatgagtaataagtacccacaggcagtcttcttggaagtagatgtgcat 373
Query: 410 cagtgtcagggaactgctgccaccaacaacatatcagcgacacctacatttttgtttttc 469
||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 374 cagtgccagggaacagctgccaccaacaacatatcagcaacacctacgtttttgtttttt 433
Query: 470 cgaaacaaagtgagaattgatcagtatcaaggagcagatgccgtgggattagaagaaaaa 529
||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||
Sbjct: 434 cgaaacaaagtgagaatcgatcagtatcaaggagcagatgctgtgggactagaagagaaa 493
Query: 530 atcaagcagcacttagaaaacgaccctggaagcaatgaggacacagatattccaaaaggc 589
|||||||||||||||||||| || |||||||||||||||||| |||| |||||||| |||
Sbjct: 494 atcaagcagcacttagaaaatgatcctggaagcaatgaggacgcagacattccaaagggc 553
Query: 590 tatatggatttaatgccttttattaacaaagctggctgtgaatgtcttaatgaaagtgac 649
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 554 tatatggatttaatgccttttattaacaaagctggttgtgaatgtcttaatgaaagtgat 613
Query: 650 gagcatggatttgacaactgtttacgaaaagacatgaccttcctggaatctgattgtgat 709
||||| || ||||||||||||||||||||||||||| ||||| |||| ||||| ||||||
Sbjct: 614 gagcacggctttgacaactgtttacgaaaagacatgtccttcttggagtctgactgtgat 673
Query: 710 gaacagctacttattactgtggcattcaatcagcctgttaagctttactcaatgaaattt 769
|| ||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 674 gagcagctccttattactgtggcattcaatcagcctgttaagctttattccatgaagttt 733
Query: 770 caagggccagataatggtcagggtcctaaatatgtaaaaatttttatcaatctaccccga 829
||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 734 caaggaccagataacggtcagggtcctaaatatgtaaaaatttttatcaacctaccccga 793
Query: 830 tctatggattttgaagaggcagaaagaagcgaaccaactcaagctctggaactaacagag 889
|||||||||||||| ||||| ||||| || || |||||||||||||||||||| |||||
Sbjct: 794 tctatggattttgaggaggcggaaaggagtgagccaactcaagctctggaactgacagaa 853
Query: 890 gatgatattaaagaagatggtattgttccacttcgttatgttaaagtttcagaatgttaa 949
||||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||
Sbjct: 854 gatgacattaaagaagatggcattgttcctcttcgttatgttaaa-tttcagaatgtcaa 912
Query: 950 cag 952
|||
Sbjct: 913 cag 915
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gctccctggcgtgactcggcact 76
|||||||||||||||||||||||
Sbjct: 22 gctccctggcgtgactcggcact 44
>gnl|UG|Bt#S12372634 OTM602700301.R1 CSEQFXL05 stomach-rumen Bos
taurus cDNA, mRNA sequence /gb=CB167998 /gi=28154123
/ug=Bt.9716 /len=862
Length = 862
Score = 680 bits (343), Expect = 0.0
Identities = 449/479 (93%), Gaps = 4/479 (0%)
Strand = Plus / Minus
Query: 476 aaagtgagaattgatcagtatcaaggagcagatgccgtgggattagaagaaaaaatcaag 535
|||||||||||||||||||||||||| | ||||| |||| | |||| ||||||||||||
Sbjct: 862 aaagtgagaattgatcagtatcaagggaccgatgctgtgg-actagaggaaaaaatcaag 804
Query: 536 cagcactt-agaaaacgaccctggaagcaatgaggacacagatattccaaaaggctatat 594
|||||||| ||| ||||||||||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 803 cagcactttagagaacgaccctgggagcaacgaggacaccgatattccgaaaggctatat 744
Query: 595 ggatttaatgccttttattaacaaagctggctgtgaatgtcttaatgaaagtgacgagca 654
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 743 ggatttaatgccttttattaacaaagctggctgtgaatgtctgaatgaaagtgatgagca 684
Query: 655 tggatttgacaactgtttacgaaaagacatgaccttcctggaatctgattgtgatgaaca 714
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 683 tggatttgacaactgtttgcgaaaagacatgaccttcttggaatctgattgtgatgaaca 624
Query: 715 gctacttattactgtggcattcaatcagcctgttaagctttactcaatgaaatttcaagg 774
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 623 gcttcttattactgtggcattcaatcagcctgttaagctttattcaatgaaatttcaagg 564
Query: 775 gccagataatggtcagggtcctaaatatgtaaaaatttttatcaatctaccccgatctat 834
||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 563 gccagataacggtcagggtcctaaatacgtaaaaatttttatcaatctaccgcgatctat 504
Query: 835 ggattttgaagaggcagaaagaagcgaaccaactcaagctctggaactaacagaggatga 894
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 503 ggattttgaagaggcagaaagaagtgagccaactcaagctctggaactaacagaggatga 444
Query: 895 ta-ttaaagaagatggtattgttccacttcgttatgttaaagtttcagaatgttaacag 952
|| ||||||||||||||||||| || |||||||| ||| ||||||||||| ||||||||
Sbjct: 443 tagttaaagaagatggtattgtccctcttcgttacgtt-aagtttcagaacgttaacag 386
>gnl|UG|Hs#S6119497 UI-H-EU1-baj-n-23-0-UI.s1 NCI_CGAP_Ct1 Homo
sapiens cDNA clone UI-H-EU1-baj-n-23-0-UI 3', mRNA
sequence /clone=UI-H-EU1-baj-n-23-0-UI /clone_end=3'
/gb=CA414219 /gi=24776870 /ug=Hs.420564 /len=748
Length = 748
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 793 tcctaaatatgtaaaaattt 812
||||||||||||||||||||
Sbjct: 359 tcctaaatatgtaaaaattt 378
>gnl|UG|Hs#S4284383 Homo sapiens mRNA for FLJ00143 protein.
/cds=(1,1122) /gb=AK074072 /gi=18676491 /ug=Hs.145047
/len=5496
Length = 5496
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 tccaggcctcggccttcctg 137
||||||||||||||||||||
Sbjct: 4977 tccaggcctcggccttcctg 4996
>gnl|UG|Mm#S10862158 Mus musculus 10 days neonate cerebellum cDNA,
RIKEN full-length enriched library, clone:B930056C04
product:unclassifiable, full insert sequence
/gb=AK047402 /gi=26092149 /ug=Mm.208705 /len=3257
Length = 3257
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 205 cttgccaggctctctgagaa 224
||||||||||||||||||||
Sbjct: 408 cttgccaggctctctgagaa 389
>gnl|UG|Bt#S15223001 Bos taurus SMC1 structural maintenance of
chromosomes 1-like 1 (yeast) (SMC1L1), mRNA
/cds=(1,3702) /gb=NM_174614 /gi=30172565 /ug=Bt.217
/len=3702
Length = 3702
Score = 40.1 bits (20), Expect = 0.21
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 915 ttccacttcgttatgttaaagttt 938
||||||||||||||| ||||||||
Sbjct: 702 ttccacttcgttatgataaagttt 679
>gnl|UG|Hs#S2038970 hj08h10.y1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA
clone IMAGE:2981251 5', mRNA sequence
/clone=IMAGE:2981251 /clone_end=5' /gb=BE041827
/gi=8358880 /ug=Hs.274837 /len=412
Length = 412
Score = 38.2 bits (19), Expect = 0.81
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 382 agcagttttcttggaagta 400
|||||||||||||||||||
Sbjct: 250 agcagttttcttggaagta 268
>gnl|UG|Hs#S15970711 Homo sapiens protein kinase, AMP-activated, beta
2 non-catalytic subunit, mRNA (cDNA clone MGC:61468
IMAGE:6091476), complete cds /cds=(140,958) /gb=BC053610
/gi=31566344 /ug=Hs.50732 /len=5430
Length = 5430
Score = 38.2 bits (19), Expect = 0.81
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 449 acacctacatttttgtttt 467
|||||||||||||||||||
Sbjct: 1756 acacctacatttttgtttt 1774
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: Jan 30, 2004 10:32 AM
Number of letters in database: 272,110,533
Number of sequences in database: 238,354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 952
length of database: 272,110,533
effective HSP length: 19
effective length of query: 933
effective length of database: 267,581,807
effective search space: 249653825931
effective search space used: 249653825931
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)