>20050322C-001159 (20050322C-001159) 20050322C-001159 GGATTGTGGG ATCTGCAGGC CGGCTGCGCG GTGGAGGTCC CGGTTCTCCG TCATGGGGTT CCAGCCGGGC GGCGGTCACG CTGCCCCTTC TGCCCACAGA GTCCAGTCCT GCTGGCTTCC CTGGGGGTGG GGCTGCTGAG TCTGCTTGGC CTAGCTCTGG GCTCCTACCT CCTGCGGAGA TCCCGCCGGC CGCTGGTCAC GCTCCTGGAC CCCAATGAAA AGTACCTGCT GCGACTGTTA GATAAAACGA CCGTGAACCA CAACACTAAG AAGTTCCGCT TTGCCCTGCC CACCGCCCAC CACGTTCTGG GGCTGCCTGT GGGCAAACAT GTCTACCTCT CTGCCCGCAT CGACGGCAGT CTTGTCATCA GGCCCTACAC TCCCATCACC AGCGATGAGG ACCAAGGCTA CGTGGATCTT GTCATCAAGG TCTACCTGAA GGGCGTGCAC CCCAAATTTC CTGAGGGAGG GAAGATGTCT CAGTACCTGA ATAGCCTGAA GCTTGGGGAT GTGGTGGAGT TTCGAGGGCC CAGTGGGTTG CTCACTTACA CCGGGAAAGG AAAGTTCAGC ATTCAGCCCA ACAAGAAATC TCCGCCGGAA CCCCGAGTGG CCAGGAAACT GGGAATGATT GCCGGAGGCA CAGGGATCAC CCCGATGCTG CAGCTGATCC GGGCCATCCT GAAAGACCCA GAAGATCCAA CCCAGTGCTT TCTGCTTTTT GCCAACCAGA CCGAAAAGGA CATAATCTTA CGGGAGGACT TGGAGGAGCT GCANGCACGA CACCCCAATC AGTTTAAGCT CTGGTTCACT CTGGATCAGC CCCCAGAAGA TTGGACCTAC AGCAAGGGTT TTGTGTCTGC CGACATGATC CGGGAGCACC TGCCTGCCCC ANCAAAAGAC GTGTTGCTGC TGCTGTGTGG GCCACCCCCC ATGGTGCAGC TGGCCTGCCA CCCCAACTAG ACAAACTGGG CTACTCACAG AAGATGCGCT TCACTACTGA GCATCCTCTC GTTTCCCTGG TCTCGCTGCC AGCATCTGCC CC
Query= 20050322C-001159 (20050322C-001159) 20050322C-001159
(1042 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
151,043 sequences; 222,131,506 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Ssc#S23213393 Sus scrofa clone Clu_19980.scr.msk.p1.Conti... 1978 0.0
Alignment gnl|UG|Mm#S9552723 Mus musculus NAD(P)H:quinone oxidoreductase t... 389 e-106
Alignment gnl|UG|Hs#S16888999 Homo sapiens cDNA FLJ41711 fis, clone HLUNG2... 218 4e-55
Alignment gnl|UG|Bt#S18946844 957927 MARC 1BOV Bos taurus cDNA 3', mRNA se... 113 2e-23
Alignment gnl|UG|Hs#S1732320 Homo sapiens diaphorase (NADH) (cytochrome b-... 72 5e-11
Alignment gnl|UG|Mm#S9087054 Mus musculus voltage-dependent calcium channe... 44 0.012
Alignment gnl|UG|Mm#S11829324 Mus musculus DNA segment, Chr 7, ERATO Doi 4... 40 0.19
Alignment gnl|UG|Mm#S23007833 Mus musculus Smith-Magenis syndrome chromoso... 38 0.73
Alignment gnl|UG|Ssc#S6061047 MI-P-AY1-nqz-a-06-0-UI.s1 MI-P-AY1 Sus scrof... 38 0.73
Alignment gnl|UG|Hs#S1407270 tx30g09.x1 NCI_CGAP_Lu24 Homo sapiens cDNA cl... 36 2.9
>gnl|UG|Ssc#S23213393 Sus scrofa clone Clu_19980.scr.msk.p1.Contig2,
mRNA sequence /gb=AY609584 /gi=52351179 /ug=Ssc.1238
/len=1618
Length = 1618
Score = 1978 bits (998), Expect = 0.0
Identities = 1025/1032 (99%), Gaps = 2/1032 (0%)
Strand = Plus / Plus
Query: 13 ctgcaggccggctgcgcggtggaggtcccggttctccgtcatggggttccagccgggcgg 72
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcaggccggctgcgcggtggaggtcgcggttctccgtcatggggttccagccgggcgg 60
Query: 73 cggtcacgctgccccttctgcccacagagtccagtcctgctggcttccctgggggtgggg 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggtcacgctgccccttctgcccacagagtccagtcctgctggcttccctgggggtgggg 120
Query: 133 ctgctgagtctgcttggcctagctctgggctcctacctcctgcggagatcccgccggccg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgctgagtctgcttggcctagctctgggctcctacctcctgcggagatcccgccggccg 180
Query: 193 ctggtcacgctcctggaccccaatgaaaagtacctgctgcgactgttagataaaacgacc 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctggtcacgctcctggaccccaatgaaaagtacctgctgcgactgttagataaaacgacc 240
Query: 253 gtgaaccacaacactaagaagttccgctttgccctgcccaccgcccaccacgttctgggg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgaaccacaacactaagaagttccgctttgccctgcccaccgcccaccacgttctgggg 300
Query: 313 ctgcctgtgggcaaacatgtctacctctctgcccgcatcgacggcagtcttgtcatcagg 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgcctgtgggcaaacatgtctacctctctgcccgcatcgacggcagtcttgtcatcagg 360
Query: 373 ccctacactcccatcaccagcgatgaggaccaaggctacgtggatcttgtcatcaaggtc 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccctacactcccatcaccagcgatgaggaccaaggctacgtggatcttgtcatcaaggtc 420
Query: 433 tacctgaagggcgtgcaccccaaatttcctgagggagggaagatgtctcagtacctgaat 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacctgaagggcgtgcaccccaaatttcctgagggagggaagatgtctcagtacctgaat 480
Query: 493 agcctgaagcttggggatgtggtggagtttcgagggcccagtgggttgctcacttacacc 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agcctgaagcttggggatgtggtggagtttcgagggcccagtgggttgctcacttacacc 540
Query: 553 gggaaaggaaagttcagcattcagcccaacaagaaatctccgccggaaccccgagtggcc 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gggaaaggaaagttcagcattcagcccaacaagaaatctccgccggaaccccgagtggcc 600
Query: 613 aggaaactgggaatgattgccggaggcacagggatcaccccgatgctgcagctgatccgg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aggaaactgggaatgattgccggaggcacagggatcaccccgatgctgcagctgatccgg 660
Query: 673 gccatcctgaaagacccagaagatccaacccagtgctttctgctttttgccaaccagacc 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccatcctgaaagacccagaagatccaacccagtgctttctgctttttgccaaccagacc 720
Query: 733 gaaaaggacataatcttacgggaggacttggaggagctgcangcacgacaccccaatcag 792
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 721 gaaaaggacataatcttacgggaggacttggaggagctgcaggcacgacaccccaatcag 780
Query: 793 tttaagctctggttcactctggatcagcccccagaagattggacctacagcaagggtttt 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tttaagctctggttcactctggatcagcccccagaagattggacctacagcaagggtttt 840
Query: 853 gtgtctgccgacatgatccgggagcacctgcctgccccancaaaagacgtgttgctgctg 912
||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 841 gtgtctgccgacatgatccgggagcacctgcctgccccagcagaggacgtgttgctgctg 900
Query: 913 ctgtgtgggccaccccccatggtgcagctggcctgccaccccaa-ctagacaaactgggc 971
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 901 ctgtgtgggccaccccccatggtgcagctggcctgccaccccaacctagacaaactgggc 960
Query: 972 tactcacagaagatgcgcttca-ctactgagcatcctctcgtttccctggtctcgctgcc 1030
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 961 tactcacagaagatgcgcttcacctactgagcatcctctcgtttccctggtctcgctgcc 1020
Query: 1031 agcatctgcccc 1042
||||||||||||
Sbjct: 1021 agcatctgcccc 1032
>gnl|UG|Mm#S9552723 Mus musculus NAD(P)H:quinone oxidoreductase type
3, polypeptide A2, mRNA (cDNA clone MGC:28918
IMAGE:4924006), complete cds /cds=p(259,945)
/gb=BC016266 /gi=16740797 /ug=Mm.280230 /len=2433
Length = 2433
Score = 389 bits (196), Expect = e-106
Identities = 367/424 (86%)
Strand = Plus / Plus
Query: 121 ctgggggtggggctgctgagtctgcttggcctagctctgggctcctacctcctgcggaga 180
||||||||||||||||| | |||||| ||||| |||||||| ||||| | | || |||
Sbjct: 295 ctgggggtggggctgcttactctgctcggcctggctctgggtacctacttggttcgaaga 354
Query: 181 tcccgccggccgctggtcacgctcctggaccccaatgaaaagtacctgctgcgactgtta 240
||||||||||||| ||| || |||| |||||| |||| ||||||||||||||| || ||
Sbjct: 355 tcccgccggccgcaggttactctccaggacccggatgagaagtacctgctgcgattgcta 414
Query: 241 gataaaacgaccgtgaaccacaacactaagaagttccgctttgccctgcccaccgcccac 300
|| || ||||| |||| ||||||||| | || ||||||||||||| ||||||||||||||
Sbjct: 415 gacaagacgacagtgagccacaacaccaggaggttccgctttgccttgcccaccgcccac 474
Query: 301 cacgttctggggctgcctgtgggcaaacatgtctacctctctgcccgcatcgacggcagt 360
||| ||||||||||||||||||| || || ||||||||||||||||| || || ||||||
Sbjct: 475 cacattctggggctgcctgtgggtaagcacgtctacctctctgcccgaattgatggcagt 534
Query: 361 cttgtcatcaggccctacactcccatcaccagcgatgaggaccaaggctacgtggatctt 420
|| ||||||||||| ||||| || ||||||| ||||| ||||||||||| || ||||||
Sbjct: 535 ctggtcatcaggccttacacccctgtcaccagtgatgaagaccaaggctatgtagatctt 594
Query: 421 gtcatcaaggtctacctgaagggcgtgcaccccaaatttcctgagggagggaagatgtct 480
||||||||||| || ||||| || |||||||||||||||||||| |||||||||||||||
Sbjct: 595 gtcatcaaggtttatctgaaaggtgtgcaccccaaatttcctgaaggagggaagatgtct 654
Query: 481 cagtacctgaatagcctgaagcttggggatgtggtggagtttcgagggcccagtgggttg 540
|| |||||| ||||||||||| |||||||| |||||||||| || ||||| || ||||||
Sbjct: 655 caatacctggatagcctgaagattggggatatggtggagttccgggggccgagcgggttg 714
Query: 541 ctca 544
||||
Sbjct: 715 ctca 718
Score = 349 bits (176), Expect = 1e-94
Identities = 371/434 (85%), Gaps = 2/434 (0%)
Strand = Plus / Plus
Query: 571 attcagcccaacaagaaatctccgccggaaccccgagtggccaggaaactgggaatgatt 630
|||||||||||||| |||||||| || |||| |||||||| | |||| |||||||||||
Sbjct: 1332 attcagcccaacaaaaaatctccacctgaactgcgagtggcgaagaaattgggaatgatt 1391
Query: 631 gccggaggcacagggatcaccccgatgctgcagctgatccgggccatcctgaaagaccca 690
|| || || ||||| |||||||| |||||||||||||||||||||||| |||||| |||
Sbjct: 1392 gctggtgggacaggaatcaccccaatgctgcagctgatccgggccatcttgaaagtccct 1451
Query: 691 gaagatccaacccagtgctttctgctttttgccaaccagaccgaaaaggacataatctta 750
||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |
Sbjct: 1452 gaagatccaacccagtgctttctgctttttgccaaccagactgaaagggatataatcctg 1511
Query: 751 cgggaggacttggaggagctgcangcacgacaccccaatcagtttaagctctggttcact 810
||||||||| | ||||| || || || | | || |||| ||||||||||||||||||
Sbjct: 1512 cgggaggacctagaggaacttcaggcccagtatcctaatcgctttaagctctggttcact 1571
Query: 811 ctggatcagcccccagaagattggacctacagcaagggttttgtgtctgccgacatgatc 870
||||| || |||||||| ||||||||||||||||| ||||| | || |||||||||
Sbjct: 1572 ctggactctcctccagaagactggacctacagcaagggctttgttacggctgacatgatc 1631
Query: 871 cgggagcacctgcctgccccancaaaagacgtgttgctgctgctgtgtgggccacccccc 930
| ||||||||||||||||||| || | || ||| |||||||||| ||||| ||||| |||
Sbjct: 1632 caggagcacctgcctgccccagcagaggatgtgctgctgctgctctgtggaccaccaccc 1691
Query: 931 atggtgcagctggcctgccaccccaac-tagacaaactgggctactcacagaagatgcgc 989
||||||||||||||||||||||| ||| | || || |||||||| ||||| ||||||||
Sbjct: 1692 atggtgcagctggcctgccaccctaacttggataagctgggctattcacaaaagatgcga 1751
Query: 990 ttca-ctactgagc 1002
|||| |||||||||
Sbjct: 1752 ttcacctactgagc 1765
>gnl|UG|Hs#S16888999 Homo sapiens cDNA FLJ41711 fis, clone
HLUNG2011298, moderately similar to Homo sapiens
cytochrome b5 reductase 1 (B5R.1) mRNA /gb=AK123705
/gi=34529317 /ug=Hs.334832 /len=3033
Length = 3033
Score = 218 bits (110), Expect = 4e-55
Identities = 166/185 (89%)
Strand = Plus / Plus
Query: 641 cagggatcaccccgatgctgcagctgatccgggccatcctgaaagacccagaagatccaa 700
|||| |||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 1655 caggaatcaccccaatgctacagctgatccgggccatcctgaaagtccctgaagatccaa 1714
Query: 701 cccagtgctttctgctttttgccaaccagaccgaaaaggacataatcttacgggaggact 760
||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||||
Sbjct: 1715 cccagtgctttctgctttttgccaaccagacagaaaaggatatcatcttgcgggaggact 1774
Query: 761 tggaggagctgcangcacgacaccccaatcagtttaagctctggttcactctggatcagc 820
| ||||| ||||| || || | ||||||| |||||||||||||||||||||||||| |
Sbjct: 1775 tagaggaactgcaggcccgctatcccaatcgctttaagctctggttcactctggatcatc 1834
Query: 821 cccca 825
|||||
Sbjct: 1835 cccca 1839
Score = 168 bits (85), Expect = 3e-40
Identities = 170/196 (86%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 828 agattggacctacagcaagggttttgtgtctgccgacatgatccgggagcacctgcctgc 887
||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||| ||
Sbjct: 2208 agattgggcctacagcaagggctttgtgactgccgacatgatccgggaacacctgcccgc 2267
Query: 888 cccancaaaagacgtgttgctgctgctgtgtgggccaccccccatggtgcagctggcctg 947
||| | || ||| || | ||||| |||||||||||||| |||||||||||||||||
Sbjct: 2268 tccaggggatgatgtgctggtactgctttgtgggccacccccaatggtgcagctggcctg 2327
Query: 948 ccaccccaac-tagacaaactgggctactcacagaagatgcgcttca-ctactgagcatc 1005
||| |||||| | |||||||||||||||||||| |||||||| |||| ||||||||||||
Sbjct: 2328 ccatcccaacttggacaaactgggctactcacaaaagatgcgattcacctactgagcatc 2387
Query: 1006 ctctcgtttccctggt 1021
||| | |||||||||
Sbjct: 2388 ctccagcttccctggt 2403
Score = 101 bits (51), Expect = 6e-20
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 570 cattcagcccaacaagaaatctccgccggaaccccgagtggccaggaaactgggaatgat 629
|||||||||||||||||||||||| || |||||||||||||| | |||||||||||||||
Sbjct: 700 cattcagcccaacaagaaatctccaccagaaccccgagtggcgaagaaactgggaatgat 759
Query: 630 tgccggaggcacagg 644
|||||| || |||||
Sbjct: 760 tgccggcgggacagg 774
>gnl|UG|Bt#S18946844 957927 MARC 1BOV Bos taurus cDNA 3', mRNA
sequence /clone_end=3' /gb=CK769823 /gi=42723917
/ti=431028184 /ug=Bt.997 /len=938
Length = 938
Score = 113 bits (57), Expect = 2e-23
Identities = 116/136 (85%)
Strand = Plus / Minus
Query: 820 cccccagaagattggacctacagcaagggttttgtgtctgccgacatgatccgggagcac 879
|||||||||| |||| | |||||||||||||| || | || ||||||||||||||||||
Sbjct: 928 cccccagaaggttgggcttacagcaagggtttcgtctttgtggacatgatccgggagcac 869
Query: 880 ctgcctgccccancaaaagacgtgttgctgctgctgtgtgggccaccccccatggtgcag 939
||||| || || |||||||| ||||| |||| || ||||||||||| |||||||||
Sbjct: 868 ctgcccgctcccggggaagacgtgctgctgttgctttgcgggccacccccgatggtgcag 809
Query: 940 ctggcctgccacccca 955
||||||||||||||||
Sbjct: 808 ctggcctgccacccca 793
>gnl|UG|Hs#S1732320 Homo sapiens diaphorase (NADH) (cytochrome b-5
reductase) (DIA1), transcript variant S, mRNA
/cds=p(176,1012) /gb=NM_007326 /gi=6552327 /ug=Hs.517666
/len=1970
Length = 1970
Score = 71.9 bits (36), Expect = 5e-11
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 620 tgggaatgattgccggaggcacagggatcaccccgatgctgcagctgatccgggccatcc 679
|||| ||||| || ||||| ||||| |||||||||||||||||| ||||||| ||||||
Sbjct: 630 tgggcatgatcgcgggagggacaggcatcaccccgatgctgcaggtgatccgcgccatca 689
Query: 680 tgaaagacccagaagatccaacccagtgctttctgctttttgccaaccagaccgaaaagg 739
|||| ||||| || || | || |||| ||||| ||||||||||||||||| ||||
Sbjct: 690 tgaaggaccctgatgaccacactgtgtgccacctgctctttgccaaccagaccgagaagg 749
Query: 740 acat 743
||||
Sbjct: 750 acat 753
Score = 69.9 bits (35), Expect = 2e-10
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 371 ggccctacactcccatcaccagcgatgaggaccaaggctacgtggatcttgtcatcaagg 430
||||||| || |||||| |||||||||| ||| | |||| |||||| || ||||||||||
Sbjct: 381 ggccctatacacccatctccagcgatgatgacaagggcttcgtggacctggtcatcaagg 440
Query: 431 tctacctgaagggcgtgcaccccaaatttcctgagggagggaagatgtctcagtacctg 489
| ||| | |||| | || ||||| ||||| | ||||||||||||||||||||||||
Sbjct: 441 tttacttcaaggacacccatcccaagtttcccgctggagggaagatgtctcagtacctg 499
>gnl|UG|Mm#S9087054 Mus musculus voltage-dependent calcium channel
alpha-2-delta-2 subunit (Cacna2d2) mRNA, complete cds
/cds=p(444,3914) /gb=AF247139 /gi=12044401 /ug=Mm.273084
/len=5498
Length = 5498
Score = 44.1 bits (22), Expect = 0.012
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 916 tgtgggccaccccccatggtgc 937
||||||||||||||||||||||
Sbjct: 4552 tgtgggccaccccccatggtgc 4531
>gnl|UG|Mm#S11829324 Mus musculus DNA segment, Chr 7, ERATO Doi 458,
expressed (D7Ertd458e), mRNA /cds=p(73,1299)
/gb=NM_027514 /gi=28076964 /ug=Mm.358660 /len=2862
Length = 2862
Score = 40.1 bits (20), Expect = 0.19
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 212 ccaatgaaaagtacctgctg 231
||||||||||||||||||||
Sbjct: 2763 ccaatgaaaagtacctgctg 2782
>gnl|UG|Mm#S23007833 Mus musculus Smith-Magenis syndrome chromosome
region, candidate 7 homolog (human) (Smcr7), mRNA
/cds=p(177,1541) /gb=NM_001009927 /gi=57862818
/ug=Mm.339760 /len=2522
Length = 2522
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 902 tgttgctgctgctgtgtgg 920
|||||||||||||||||||
Sbjct: 1243 tgttgctgctgctgtgtgg 1261
>gnl|UG|Ssc#S6061047 MI-P-AY1-nqz-a-06-0-UI.s1 MI-P-AY1 Sus scrofa
cDNA clone MI-P-AY1-nqz-a-06-0-UI 3', mRNA sequence
/clone=MI-P-AY1-nqz-a-06-0-UI /clone_end=3' /gb=BF710434
/gi=12009911 /ug=Ssc.9394 /len=540
Length = 540
Score = 38.2 bits (19), Expect = 0.73
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 907 ctgctgctgtgtgggccac 925
|||||||||||||||||||
Sbjct: 286 ctgctgctgtgtgggccac 268
>gnl|UG|Hs#S1407270 tx30g09.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone
IMAGE:2271136 3' similar to contains element TAR1 TAR1
repetitive element ;, mRNA sequence /clone=IMAGE:2271136
/clone_end=3' /gb=AI689748 /gi=4901042 /ug=Hs.547152
/len=485
Length = 485
Score = 36.2 bits (18), Expect = 2.9
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 449 accccaaatttcctgagggagg 470
||||| ||||||||||||||||
Sbjct: 230 acccccaatttcctgagggagg 251
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: Mar 18, 2005 8:01 PM
Number of letters in database: 222,131,506
Number of sequences in database: 151,043
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 1042
length of database: 222,131,506
effective HSP length: 19
effective length of query: 1023
effective length of database: 219,261,689
effective search space: 224304707847
effective search space used: 224304707847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)