>20050322C-002810 (20050322C-002810) 20050322C-002810 GTGTTCGTGT AGGGGAGGCT GGAAGCCGCA GGAGCGGGAG ACGGTGGAGG GGATTTTGAG AAGAAAACTG CGGTAGCGAC CTCACTCGGT GGTACAAGAG GGGAACGCTA GTCCCTCCGA AAGCCGGGTT ACTGCGAACG CACCAGCTGA GCCCTTAGTA CTGCAACCCC CACCCTCCTT TGGTTTGTGG AGGAGCCTGA CCACTCTGCC TCTTATGGCC ACAATGCTGA CCGCCCGCCT CTCCAGACCC CTGTCGCAGC TCCCAAGGAA AACCCTGAAT TTCTCTGAGA GAGAAAATGG AGCAAGAGGC TCGCTGCTGT TTTACTCTCC CTCCTTTGTC CCTGGCAGCC GTCGGACTTA TGCTGATTCG GTGAACCCGG TTGGCAGCAA AGCTGTCCTG GTCACAGGCT GTGACTCTGG ATTTGGGTTC TCACTGGCCA AGCATCTGCA TTCAAAAGGC TTCCTTGTAT TTGCTGGCTG CTTGATGAAG GACAAAGGGC ATGACGGGGT CAAGGAACTG GACAGCTTGA AGAGTGATCG ATTAAGAACC GTCCAGCTCA ATGTCTGCAA AAGTGAAGAA GTAGAGAAAG TGGTGGAGAC CATCCGCTCG AGCTTGCAGG ACCCTGAGAA AGGCTTGTGG GGCCTGGTTA ACAATGCAGG CATCTCAACG TTCGGGGACG TGGAATTCAC CAGCATGGAG ACCTACAAGG AGGTGGCAGA AGTGAACCTC TGGGGCACGG TGCGGGTGAC AAAATCTTTT CTCCCTCTCA TCCGGAGGGC CAAAGGCCGC GTGGTCAACA TCAGCAGCAT AATGGGCGCT TGGCCAATGT GAGCCGCTCC CCCTACTGCA TCACCAAGTT CGGGGTGGAG GCTTTCTCTG ACTGCCTGCG CTACGAGATG CACCCTCTAG GAGTGAAGGT CAGCGTGGTG GAGCCCGGCA ACTTCATCGT CGCCACCAGC CTCTACAGCC CTGAGCGCAT CCGGGCCATC GCCACTAAGA TGTGGGAGCA GGTGCCCGAG ACGGTGCGTC AAGACTACGG CAGGAAGTAC TTTGATGAGA TGGTCGCCAG GATGGAGAAC TTCTGCAACA GCGGCTCCAC GGACACGTCT CCCGTCATCA ATGCTGTCAC CCACGCCCTG ACCTCCACCA CCCCCTACAC TCGCTACCAC CCCATGGACT A
Query= 20050322C-002810 (20050322C-002810) 20050322C-002810
(1181 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
151,043 sequences; 222,131,506 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Ssc#S5998011 131277 MARC 1PIG Sus scrofa cDNA 5', mRNA se... 1336 0.0
Alignment gnl|UG|Hs#S19132850 Homo sapiens 3-hydroxybutyrate dehydrogenase... 910 0.0
Alignment gnl|UG|Mm#S9678309 Mus musculus 3-hydroxybutyrate dehydrogenase ... 454 e-126
Alignment gnl|UG|Bt#S19028882 968605 MARC 4BOV Bos taurus cDNA 3', mRNA se... 422 e-116
Alignment gnl|UG|Hs#S4096781 UI-E-EJ0-ail-m-07-0-UI.s1 UI-E-EJ0 Homo sapie... 133 2e-29
Alignment gnl|UG|Ssc#S20116794 Sus scrofa hydroxysteroid 11-beta dehydroge... 44 0.013
Alignment gnl|UG|Hs#S572202 Homo sapiens alpha1A-voltage-dependent calcium... 40 0.21
Alignment gnl|UG|Mm#S8885426 602025543F1 NCI_CGAP_Li9 Mus musculus cDNA cl... 40 0.21
Alignment gnl|UG|Hs#S1495012 wh51a07.x1 NCI_CGAP_Kid11 Homo sapiens cDNA c... 38 0.83
Alignment gnl|UG|Hs#S16889922 Homo sapiens cDNA FLJ16333 fis, clone TESOP2... 38 0.83
>gnl|UG|Ssc#S5998011 131277 MARC 1PIG Sus scrofa cDNA 5', mRNA
sequence /clone_end=5' /gb=BE032366 /gi=8327375
/ti=447576872 /ug=Ssc.2997 /len=891
Length = 891
Score = 1336 bits (674), Expect = 0.0
Identities = 784/812 (96%), Gaps = 7/812 (0%)
Strand = Plus / Plus
Query: 100 ggggaacgctagtccctccgaaagccgggttactgcgaacgcaccagctgagcccttagt 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ggggaacgctagtccctccgaaagccgggttactgcgaacgcaccagctgagcccttagt 128
Query: 160 actgcaacccccaccctcctttggtttgtggaggagcctgaccactctgcctcttatggc 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 actgcaacccccaccctcctttggtttgtggaggagcctgaccactctgcctcttatggc 188
Query: 220 cacaatgctgaccgcccgcctctccagacccctgtcgcagctcccaaggaaaaccctgaa 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cacaatgctgaccgcccgcctctccagacccctgtcgcagctcccaaggaaaaccctgaa 248
Query: 280 tttctctgagagagaaaatggagcaagaggctcgctgctgttttactctccctcctttgt 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttctctgagagagaaaatggagcaagaggctcgctgctgttttactctccctcctttgt 308
Query: 340 ccctggcagccgtcggacttatgctgattcggtgaacccggttggcagcaaagctgtcct 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ccctggcagccgtcggacttatgctgattcggtgaacccggttggcagcaaagctgtcct 368
Query: 400 ggtcacaggctgtgactctggatttgggttctcactggccaagcatctgcattcaaaagg 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggtcacaggctgtgactctggatttgggttctcactggccaagcatctgcattcaaaagg 428
Query: 460 cttccttgtatttgctggctgcttgatgaaggacaaagggcatgacggggtcaaggaact 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cttccttgtatttgctggctgcttgatgaaggacaaagggcatgacggggtcaaggaact 488
Query: 520 ggacagcttgaagagtgatcgattaagaaccgtccagctcaatgtctgcaaaagtgaaga 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ggacagcttgaagagtgatcgattaagaaccgtccagctcaatgtctgcaaaagtgaaga 548
Query: 580 agtagagaaagtggtggagaccatccgctcgagcttgcaggaccctgagaaaggcttgtg 639
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agtacagaaagtggtggagaccatccgctcgagcttgcaggaccctgagaaaggcttgtc 608
Query: 640 gggcctggttaacaatgcaggcatctcaacgttcggggacgtggaattcaccagcatgga 699
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 609 gggcctggttaacaatgcaggcatctcaacgttcggggacgtgnaattcaccancatgga 668
Query: 700 ga-cctacaaggaggtggcagaagtgaacctctggggcacggt-gcgggtgacaaaatct 757
|| ||||| ||||||||||| |||||||||||||||||||||| || | |||||||||
Sbjct: 669 gaccctac-aggaggtggcaaaagtgaacctctggggcacggtggcagatgacaaaattc 727
Query: 758 tttctccctctcatccggagggccaaaggccgcgtggtcaacatcagcagcataatggg- 816
|||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 728 tttctccctctcattcggaggaccaaaggccgcgtggtcaacatcagcagcatagtgggc 787
Query: 817 cgcttggccaatgtgagccgctccccctactgcatcaccaagttcggggtgg-aggcttt 875
|||| |||||| | |||||| ||||||||||| |||| ||||||||||| || |||||||
Sbjct: 788 cgctgggccaaagggagccggtccccctactggatcaacaagttcgggggggaaggcttt 847
Query: 876 ctctgac-tgcctgcgctacgagatgcaccct 906
|| |||| |||||| |||| ||||||||||||
Sbjct: 848 ctttgacttgcctg-gctaagagatgcaccct 878
>gnl|UG|Hs#S19132850 Homo sapiens 3-hydroxybutyrate dehydrogenase
(heart, mitochondrial) (BDH), nuclear gene encoding
mitochondrial protein, transcript variant 3, mRNA
/cds=p(400,1431) /gb=NM_203314 /gi=44680135 /ug=Hs.274539
/len=1773
Length = 1773
Score = 910 bits (459), Expect = 0.0
Identities = 742/835 (88%), Gaps = 1/835 (0%)
Strand = Plus / Plus
Query: 348 gccgtcggacttatgctgattcggtgaacccggttggcagcaaagctgtcctggtcacag 407
|||||||||||||||| | ||| | | |||||||||||||||||||||||||||||||
Sbjct: 524 gccgtcggacttatgccagtgcggcggagccggttggcagcaaagctgtcctggtcacag 583
Query: 408 gctgtgactctggatttgggttctcactggccaagcatctgcattcaaaaggcttccttg 467
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 584 gctgtgactctggatttgggttctcattggccaagcatctgcattcaaaaggcttccttg 643
Query: 468 tatttgctggctgcttgatgaaggacaaagggcatgacggggtcaaggaactggacagct 527
| ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 644 tgtttgctggctgcttgatgaaggacaaaggccatgatggggtcaaggagctggacagcc 703
Query: 528 tgaagagtgatcgattaagaaccgtccagctcaatgtctgcaaaagtgaagaagtagaga 587
| || ||||| ||||| ||||||||||||||||||||||||| || ||||| || ||||
Sbjct: 704 taaacagtgaccgattgagaaccgtccagctcaatgtctgcagcagcgaagaggtggaga 763
Query: 588 aagtggtggagaccatccgctcgagcttgcaggaccctgagaaaggcttgtggggcctgg 647
|||||||||||| ||||||||||| || ||||||||||||||||| |||||||||| |
Sbjct: 764 aagtggtggagattgtccgctcgagcctgaaggaccctgagaaaggcatgtggggcctcg 823
Query: 648 ttaacaatgcaggcatctcaacgttcggggacgtggaattcaccagcatggagacctaca 707
|||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||
Sbjct: 824 ttaacaatgccggcatctcaacgttcggggaggtggagttcaccagcctggagacctaca 883
Query: 708 aggaggtggcagaagtgaacctctggggcacggtgcgggtgacaaaatcttttctccctc 767
|| ||||||||||||||||||| |||||||| |||||| |||| ||||| |||||||| |
Sbjct: 884 agcaggtggcagaagtgaacctttggggcacagtgcggatgacgaaatcctttctccccc 943
Query: 768 tcatccggagggccaaaggccgcgtggtcaacatcagcagcataatggg-cgcttggcca 826
||||||| ||||||||||||||||| ||||| ||||||||||| |||| ||| ||||||
Sbjct: 944 tcatccgaagggccaaaggccgcgtcgtcaatatcagcagcatgctgggccgcatggcca 1003
Query: 827 atgtgagccgctccccctactgcatcaccaagttcggggtggaggctttctctgactgcc 886
| | ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 1004 acccggcccgctccccgtactgcatcaccaagttcggggtagaggctttctcggactgcc 1063
Query: 887 tgcgctacgagatgcaccctctaggagtgaaggtcagcgtggtggagcccggcaacttca 946
||||||| |||||| |||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 1064 tgcgctatgagatgtaccccctgggcgtgaaggtcagcgtggtggagcccggcaacttca 1123
Query: 947 tcgtcgccaccagcctctacagccctgagcgcatccgggccatcgccactaagatgtggg 1006
||| ||||||||||| |||||||||||| |||| | ||||||||||| ||||||||||
Sbjct: 1124 tcgctgccaccagcctttacagccctgagagcattcaggccatcgccaagaagatgtggg 1183
Query: 1007 agcaggtgcccgagacggtgcgtcaagactacggcaggaagtactttgatgagatggtcg 1066
|| || |||| ||| ||||| | |||||||||| ||||||||||||||| | | |||
Sbjct: 1184 aggagctgcctgaggtcgtgcgcaaggactacggcaagaagtactttgatgaaaagatcg 1243
Query: 1067 ccaggatggagaacttctgcaacagcggctccacggacacgtctcccgtcatcaatgctg 1126
||| |||||||| || ||||| ||| |||||||| |||||||| || |||||| ||||||
Sbjct: 1244 ccaagatggagacctactgcagcagtggctccacagacacgtcccctgtcatcgatgctg 1303
Query: 1127 tcacccacgccctgacctccaccaccccctacactcgctaccaccccatggacta 1181
|||| |||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 1304 tcacacacgccctgaccgccaccaccccctacacccgctaccaccccatggacta 1358
Score = 71.9 bits (36), Expect = 6e-11
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 224 atgctgaccgcccgcctctccagacccctgtcgcagctcccaaggaaaaccctgaatttc 283
|||||| || |||||||||||||||||||||| | ||||||| | |||||||| | | |
Sbjct: 400 atgctggccacccgcctctccagacccctgtcacggctcccaggaaaaaccctaagtgcc 459
Query: 284 tctgagagagaaaatggagcaaga 307
| ||| ||||||||||||||||||
Sbjct: 460 tgtgatagagaaaatggagcaaga 483
>gnl|UG|Mm#S9678309 Mus musculus 3-hydroxybutyrate dehydrogenase
(heart, mitochondrial), mRNA (cDNA clone IMAGE:5051325),
partial cds /cds=p(1,766) /gb=BC027063 /gi=20071588
/ug=Mm.293470 /len=2592
Length = 2592
Score = 454 bits (229), Expect = e-126
Identities = 566/677 (83%), Gaps = 1/677 (0%)
Strand = Plus / Plus
Query: 506 ggggtcaaggaactggacagcttgaagagtgatcgattaagaaccgtccagctcaatgtc 565
|||||||||||||||||||||||||||||||| ||| | |||||| ||||||||||||||
Sbjct: 17 ggggtcaaggaactggacagcttgaagagtgaccgactgagaaccatccagctcaatgtc 76
Query: 566 tgcaaaagtgaagaagtagagaaagtggtggagaccatccgctcgagcttgcaggaccct 625
||||| |||||||| || ||||| | ||||||||| |||||||| || || | || |||
Sbjct: 77 tgcaacagtgaagaggtggagaaggcggtggagacgatccgctccggcctgaaagatcct 136
Query: 626 gagaaaggcttgtggggcctggttaacaatgcaggcatctcaacgttcggggacgtggaa 685
||||| || ||||||||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct: 137 gagaagggaatgtggggcctggttaacaacgcaggcatctcaacgtttggggaggtggag 196
Query: 686 ttcaccagcatggagacctacaaggaggtggcagaagtgaacctctggggcacggtgcgg 745
||||||||||||||||| || ||||||||||| ||||||||||||||||| || |||||
Sbjct: 197 ttcaccagcatggagacatataaggaggtggctgaagtgaacctctggggaaccgtgcgc 256
Query: 746 gtgacaaaatcttttctccctctcatccggagggccaaaggccgcgtggtcaacatcagc 805
|||||||| || || || || |||| || |||||||| ||||| || |||||||||
Sbjct: 257 accacaaaatccttccttccccttctccgaagagccaaaggtcgcgtcgttaacatcagc 316
Query: 806 agcataatggg-cgcttggccaatgtgagccgctccccctactgcatcaccaagttcggg 864
||||| |||| ||| ||||||| |||||| || ||||||||||||||||| |||
Sbjct: 317 agcatgctgggccgcatggccaaccccgcccgctcgccatactgcatcaccaagtttggg 376
Query: 865 gtggaggctttctctgactgcctgcgctacgagatgcaccctctaggagtgaaggtcagc 924
|| ||||||||||| |||||||||||||| |||||||||||||| || || ||||||||
Sbjct: 377 gtcgaggctttctcggactgcctgcgctatgagatgcaccctctgggtgtcaaggtcagt 436
Query: 925 gtggtggagcccggcaacttcatcgtcgccaccagcctctacagccctgagcgcatccgg 984
|||||||| || ||||||||||| | |||||||| ||||||||||| |||||||||| |
Sbjct: 437 gtggtggaacctggcaacttcatagcggccaccagtctctacagccccgagcgcatccag 496
Query: 985 gccatcgccactaagatgtgggagcaggtgcccgagacggtgcgtcaagactacggcagg 1044
|||||||||| ||||||||||| | |||| ||| || || | ||||| ||||||
Sbjct: 497 gccatcgccaagaagatgtgggatgacctgcctgaggtcgtccgcaaggactatggcagg 556
Query: 1045 aagtactttgatgagatggtcgccaggatggagaacttctgcaacagcggctccacggac 1104
|||||||| ||||| | | | |||| |||||| | || |||||||||||| ||||| ||
Sbjct: 557 aagtacttcgatgaaaagattgccaagatggaaacctactgcaacagcggttccacagat 616
Query: 1105 acgtctcccgtcatcaatgctgtcacccacgccctgacctccaccaccccctacactcgc 1164
|| || | |||||||| |||||||| |||||| ||||| || ||||||| || || |||
Sbjct: 617 acttcctctgtcatcaacgctgtcacacacgccttgaccgccgccaccccgtatacccgc 676
Query: 1165 taccaccccatggacta 1181
||||| |||||||||||
Sbjct: 677 taccatcccatggacta 693
>gnl|UG|Bt#S19028882 968605 MARC 4BOV Bos taurus cDNA 3', mRNA
sequence /clone_end=3' /gb=CK846136 /gi=45206347
/ti=435858429 /ug=Bt.9777 /len=909
Length = 909
Score = 422 bits (213), Expect = e-116
Identities = 317/351 (90%), Gaps = 3/351 (0%)
Strand = Plus / Minus
Query: 834 ccgctccccctactgcatcaccaagttcggggtggaggctttctctgactgcctgcgcta 893
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 ccgctccccgtactgcatcaccaagttcggggtggaggctttctctgactgcctgcgcta 850
Query: 894 cgagatgcaccctctaggagtgaaggtcagcgtggtggagcccggcaacttcatcgtcgc 953
|||||||||||| || ||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 849 cgagatgcacccgctgggagtgaaggtcagcgtggtggaacccggcaacttcatcgccgc 790
Query: 954 caccagcctctacagcc---ctgagcgcatccgggccatcgccactaagatgtgggagca 1010
||||||||||||| || |||||||||||| ||||||||||| |||||||||||| |
Sbjct: 789 caccagcctctacggcggtactgagcgcatccaggccatcgccaacaagatgtgggagga 730
Query: 1011 ggtgcccgagacggtgcgtcaagactacggcaggaagtactttgatgagatggtcgccag 1070
| |||| ||| |||||| || |||||||||||||||||||| ||||||| |||||||||
Sbjct: 729 gctgcctgaggtggtgcgccaggactacggcaggaagtacttcgatgagaaggtcgccag 670
Query: 1071 gatggagaacttctgcaacagcggctccacggacacgtctcccgtcatcaatgctgtcac 1130
|||||||| || ||||| |||||||||||||||||| ||||| |||||||| ||||| ||
Sbjct: 669 gatggagagctactgcaccagcggctccacggacacctctcctgtcatcaaggctgtgac 610
Query: 1131 ccacgccctgacctccaccaccccctacactcgctaccaccccatggacta 1181
||||||||||| ||||||| ||||||||||||||||| |||||||||||
Sbjct: 609 acacgccctgactgccaccactccctacactcgctaccatcccatggacta 559
>gnl|UG|Hs#S4096781 UI-E-EJ0-ail-m-07-0-UI.s1 UI-E-EJ0 Homo sapiens
cDNA clone UI-E-EJ0-ail-m-07-0-UI 3', mRNA sequence
/clone=UI-E-EJ0-ail-m-07-0-UI /clone_end=3' /gb=BM681084
/gi=18990980 /ti=151725972 /ug=Hs.548464 /len=880
Length = 880
Score = 133 bits (67), Expect = 2e-29
Identities = 156/186 (83%), Gaps = 1/186 (0%)
Strand = Plus / Minus
Query: 997 aagatgtgggagcaggtgcccgagacggtgcgtcaagactacggcaggaagtactttgat 1056
|||||||||||| || |||| ||| ||||| | || ||||||| |||||||| ||||
Sbjct: 657 aagatgtgggaggagctgcctgagtncgtgcgcaaggantacggcaagaagtactntgat 598
Query: 1057 gagatggtcgccaggatggagaacttctgcaacagcggctccacggacacgtctcccgtc 1116
|| | | |||||| |||||||| || ||||| ||| |||||||| |||||||| || |||
Sbjct: 597 gaaaagatcgccaagatggagacctactgcagcagtggctccacagacacgtcccctgtc 538
Query: 1117 atcaatgctgtcacccacgccctgacctccacca-ccccctacactcgctaccaccccat 1175
||| |||||||||| |||||||||||| ||| || |||||||||| || |||||||||||
Sbjct: 537 atcgatgctgtcacacacgccctgaccgccancacccccctacacccgntaccaccccat 478
Query: 1176 ggacta 1181
||||||
Sbjct: 477 ggacta 472
>gnl|UG|Ssc#S20116794 Sus scrofa hydroxysteroid 11-beta
dehydrogenase 2 (HSD11B2), mRNA /cds=p(66,1268)
/gb=NM_213913 /gi=47522657 /ug=Ssc.2635 /len=1386
Length = 1386
Score = 44.1 bits (22), Expect = 0.013
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 636 tgtggggcctggttaacaatgcaggc 661
||||||||||||| ||||||||||||
Sbjct: 547 tgtggggcctggtcaacaatgcaggc 572
>gnl|UG|Hs#S572202 Homo sapiens alpha1A-voltage-dependent calcium
channel mRNA, splice form BI-1-Vi-GGCAG, complete cds
/cds=p(218,7735) /gb=U79666 /gi=2281751 /ug=Hs.408449
/len=7827
Length = 7827
Score = 40.1 bits (20), Expect = 0.21
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 706 caaggaggtggcagaagtga 725
||||||||||||||||||||
Sbjct: 2446 caaggaggtggcagaagtga 2465
>gnl|UG|Mm#S8885426 602025543F1 NCI_CGAP_Li9 Mus musculus cDNA clone
IMAGE:4160650 5'. /clone=IMAGE:4160650 /clone_end=5'
/gb=BF235615 /gi=11148373 /ti=44439922 /ug=Mm.6696
/len=1721
Length = 1721
Score = 40.1 bits (20), Expect = 0.21
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 638 tggggcctggttaacaatgcaggcatct 665
||||||||||| |||||||| |||||||
Sbjct: 508 tggggcctggtcaacaatgctggcatct 535
Score = 36.2 bits (18), Expect = 3.3
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 402 tcacaggctgtgactctggatttggg 427
|||| |||||||||||||| ||||||
Sbjct: 290 tcacgggctgtgactctggctttggg 315
>gnl|UG|Hs#S1495012 wh51a07.x1 NCI_CGAP_Kid11 Homo sapiens cDNA
clone IMAGE:2384244 3' similar to contains LOR1.b2 LOR1
LOR1 repetitive element ;, mRNA sequence
/clone=IMAGE:2384244 /clone_end=3' /gb=AI830424
/gi=5451095 /ug=Hs.546990 /len=487
Length = 487
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 53 attttgagaagaaaactgc 71
|||||||||||||||||||
Sbjct: 54 attttgagaagaaaactgc 72
>gnl|UG|Hs#S16889922 Homo sapiens cDNA FLJ16333 fis, clone
TESOP2002150, moderately similar to RETINOL
DEHYDROGENASE TYPE I (EC 1.1.1.105) /gb=AK122782
/gi=34527978 /ug=Hs.380178 /len=1765
Length = 1765
Score = 38.2 bits (19), Expect = 0.83
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 402 tcacaggctgtgactctgg 420
|||||||||||||||||||
Sbjct: 233 tcacaggctgtgactctgg 251
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: Mar 18, 2005 8:01 PM
Number of letters in database: 222,131,506
Number of sequences in database: 151,043
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 1181
length of database: 222,131,506
effective HSP length: 19
effective length of query: 1162
effective length of database: 219,261,689
effective search space: 254782082618
effective search space used: 254782082618
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)