Search to UniGene2 database
Query= 20050322S-024291 (20050322S-024291) 20050322S-024291
(672 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
151,043 sequences; 222,131,506 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Mm#S10867028 Mus musculus adult male spinal cord cDNA, RI... 38 0.47
Alignment gnl|UG|Mm#S10859067 Mus musculus 13 days embryo lung cDNA, RIKEN... 38 0.47
Alignment gnl|UG|Hs#S2139606 Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polyp... 36 1.8
Alignment gnl|UG|Hs#S4619549 Homo sapiens cDNA FLJ34547 fis, clone HLUNG20... 36 1.8
Alignment gnl|UG|Hs#S1728373 Homo sapiens cathepsin O (CTSO), mRNA /cds=p(... 36 1.8
Alignment gnl|UG|Hs#S15115860 Homo sapiens solute carrier family 5 (sodium... 36 1.8
Alignment gnl|UG|Hs#S21284203 full-length cDNA clone CS0DM002YC04 of Fetal... 36 1.8
Alignment gnl|UG|Mm#S21504976 Mus musculus cDNA clone MGC:90739 IMAGE:6816... 36 1.8
Alignment gnl|UG|Mm#S14887553 Mus musculus zinc finger, FYVE domain contai... 36 1.8
Alignment gnl|UG|Mm#S9107953 Mus musculus abl-interactor 1, mRNA (cDNA clo... 36 1.8
>gnl|UG|Mm#S10867028 Mus musculus adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330062J17
product:unknown EST, full insert sequence /gb=AK039561
/gi=26087253 /ug=Mm.351266 /len=2197
Length = 2197
Score = 38.2 bits (19), Expect = 0.47
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 27 tttgaacagaacttggagggaga 49
||||||||||||||| |||||||
Sbjct: 459 tttgaacagaacttgcagggaga 437
>gnl|UG|Mm#S10859067 Mus musculus 13 days embryo lung cDNA, RIKEN
full-length enriched library, clone:D430047J20
product:unknown EST, full insert sequence /gb=AK052542
/gi=26095248 /ug=Mm.253257 /len=911
Length = 911
Score = 38.2 bits (19), Expect = 0.47
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 326 attagaagaaatgtgggtc 344
|||||||||||||||||||
Sbjct: 392 attagaagaaatgtgggtc 374
>gnl|UG|Hs#S2139606 Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46 (DDX46), mRNA /cds=p(169,3264)
/gb=NM_014829 /gi=41327772 /ug=Hs.533245 /len=5695
Length = 5695
Score = 36.2 bits (18), Expect = 1.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 108 agaaagctgaggggaaaa 125
||||||||||||||||||
Sbjct: 2447 agaaagctgaggggaaaa 2464
>gnl|UG|Hs#S4619549 Homo sapiens cDNA FLJ34547 fis, clone HLUNG2009067
/gb=AK091866 /gi=21750335 /ug=Hs.453331 /len=2672
Length = 2672
Score = 36.2 bits (18), Expect = 1.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 58 tccagttgagggaaccag 75
||||||||||||||||||
Sbjct: 1440 tccagttgagggaaccag 1457
>gnl|UG|Hs#S1728373 Homo sapiens cathepsin O (CTSO), mRNA
/cds=p(50,1015) /gb=NM_001334 /gi=38327639 /ug=Hs.75262
/len=2943
Length = 2943
Score = 36.2 bits (18), Expect = 1.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 109 gaaagctgaggggaaaac 126
||||||||||||||||||
Sbjct: 2102 gaaagctgaggggaaaac 2085
>gnl|UG|Hs#S15115860 Homo sapiens solute carrier family 5
(sodium/glucose cotransporter), member 9, mRNA (cDNA
clone IMAGE:5189864), with apparent retained intron
/gb=BC048332 /gi=29477008 /ug=Hs.37890 /len=3844
Length = 3844
Score = 36.2 bits (18), Expect = 1.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 253 tggcagtgagcccgcaga 270
||||||||||||||||||
Sbjct: 2229 tggcagtgagcccgcaga 2212
>gnl|UG|Hs#S21284203 full-length cDNA clone CS0DM002YC04 of Fetal
liver of Homo sapiens (human) /gb=CR617868 /gi=50498675
/ug=Hs.28149 /len=2774
Length = 2774
Score = 36.2 bits (18), Expect = 1.8
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 566 agcccagaagagagtctgggggaggt 591
|||||||||||||| |||||| ||||
Sbjct: 1738 agcccagaagagaggctggggcaggt 1713
>gnl|UG|Mm#S21504976 Mus musculus cDNA clone MGC:90739
IMAGE:6816252, complete cds /cds=p(83,1435) /gb=BC079642
/gi=50927509 /ug=Mm.370500 /len=2962
Length = 2962
Score = 36.2 bits (18), Expect = 1.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 351 gacagcttctttaaatca 368
||||||||||||||||||
Sbjct: 751 gacagcttctttaaatca 768
>gnl|UG|Mm#S14887553 Mus musculus zinc finger, FYVE domain containing
20, mRNA (cDNA clone MGC:61215 IMAGE:6412839), complete
cds /cds=p(271,2622) /gb=BC049106 /gi=29145068
/ug=Mm.290734 /len=5242
Length = 5242
Score = 36.2 bits (18), Expect = 1.8
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 107 gagaaagctgaggggaaa 124
||||||||||||||||||
Sbjct: 3737 gagaaagctgaggggaaa 3720
>gnl|UG|Mm#S9107953 Mus musculus abl-interactor 1, mRNA (cDNA clone
MGC:6064 IMAGE:3498068), complete cds /cds=p(128,1558)
/gb=BC004657 /gi=13435559 /ug=Mm.205647 /len=3371
Length = 3371
Score = 36.2 bits (18), Expect = 1.8
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 351 gacagcttctttaaatca 368
||||||||||||||||||
Sbjct: 796 gacagcttctttaaatca 813
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: Mar 18, 2005 8:01 PM
Number of letters in database: 222,131,506
Number of sequences in database: 151,043
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 672
length of database: 222,131,506
effective HSP length: 19
effective length of query: 653
effective length of database: 219,261,689
effective search space: 143177882917
effective search space used: 143177882917
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)