>20050322S-034384 (20050322S-034384) 20050322S-034384 CAGCGCGATG GCGGCGGCTC CTTCAGGCCC CTGAAGGGGG ATTTAGGCCC GGGAGATCCG AGTCCATCCG CGGCGGGGAG AGGGCGAACG GGGTTGGCGG AGGCCGCCAT GGAGCTCAGA GTGGGGAACA GGTACCGGCT GGGCCGGAAG ATCGGCAGCG GGTCCTTCGG AGACATCTAT CTCGGTACGG ACATTGCTGC GGGAGAAGAA GTTGCCATCA AGCTTGAATG TGTCAAAACT AAGCACCCTC AGCTCCACAT CGAGAGCAAA ATCTACAAGA TGATGCAGGG AGGAGTGGGC ATCCCCACCA TCCGGTGGTG TGGGGCCGAG GGCGACTACA ACGTCATGGT CATGGAGCTG CTGGGGCCCA GCCTGGAGGA CCTCTTCAAC TTCTGCTCCA GGAAGTTCAG CCTCAAGACC GTCCTGCTGC TCGCTGACCA GATGATCAGC CGCATCGAGT ACATCCACTC GAAGAACTTC ATCCACCGGG ACGTGAAGCC GGACAACTTC CTCATGGGGC TGGGCAAGAA GGGCAACCTG GTGTACATCA TCGACTTCGG GCTGGCCAAG AAGTACCGGG ACGCCCGCAC CCACCAGCAC ATCCCCTACC GCGAGAACAA GAACCTCACC GGCACCGCGC GCTACGCCTC CATCAACACG CACCTCGGCA TCGAACAATC TCGGAGGGAC GACCTGGAAT CTCTGGGCTA CGTGCTCATG TACTTCAACC TGNGCTCGCT GCCCTGGCAG GGCCTGAANG CGGCCATCCA GCGCCAGAAG TACGAGCGCA TCAGCGAGAA GAAGATGTCC ACGCCCATCG AGGTGCTCTG NCAAGGCTAC CCCTCCGAGT TCGCCACGTA CCTGAACTTC TGCCGTTCCC TGCGCTTTGA TGACAAGCCT GACTACTCCT ACCTGAAGCA GCTCTTCCGG AACCTGTTCC ACCGCAGGGC TTCTCCTACG ATAACTTCTT GAATGGAACT GCTCAATTTT GGAGCCGTCC GGGAACCGAC AACCCAAACG GAACCCCGGG ACCAAAGGAG CGCTGAAAAA TTCCGAACCC ATCCCCCGGG CCTCCCTCAA GGCTTAGCGG CTGAAGGGGA CCAGAGGGGG CCTCCACCCC TTACCTAATT AAAAGGGAAC CTTTCCCGCC CGTTCGCTTG AAAA
Query= 20050322S-034384 (20050322S-034384) 20050322S-034384
(1164 letters)
Database: UniGene(Bt+Hs+Ssc+Mm)
151,043 sequences; 222,131,506 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gnl|UG|Ssc#S18336355 BP463602 full-length enriched swine cDNA li... 1546 0.0
Alignment gnl|UG|Hs#S5518205 Homo sapiens casein kinase 1, epsilon (CSNK1E... 787 0.0
Alignment gnl|UG|Bt#S22247476 CR849891 Normalized and Subtracted bovine en... 630 e-179
Alignment gnl|UG|Hs#S16883841 Homo sapiens cDNA FLJ46820 fis, clone TSTOM2... 513 e-144
Alignment gnl|UG|Bt#S11999909 340518 BARC 5BOV Bos taurus cDNA 5', mRNA se... 400 e-110
Alignment gnl|UG|Mm#S10869622 Mus musculus adult male urinary bladder cDNA... 165 5e-39
Alignment gnl|UG|Hs#S16592238 Homo sapiens casein kinase I gamma 2 primary... 70 2e-10
Alignment gnl|UG|Mm#S17971788 Mus musculus casein kinase 1, gamma 2, mRNA ... 70 2e-10
Alignment gnl|UG|Mm#S10857618 Mus musculus 0 day neonate skin cDNA, RIKEN ... 66 4e-09
Alignment gnl|UG|Ssc#S22286632 CJ029362 full-length enriched swine cDNA li... 54 1e-05
>gnl|UG|Ssc#S18336355 BP463602 full-length enriched swine cDNA
library, adult uterus Sus scrofa cDNA clone UTR010066D03
5', mRNA sequence /clone=UTR010066D03 /clone_end=5'
/gb=BP463602 /gi=40482492 /ug=Ssc.9746 /len=847
Length = 847
Score = 1546 bits (780), Expect = 0.0
Identities = 805/813 (99%), Gaps = 1/813 (0%)
Strand = Plus / Plus
Query: 103 gccgccatggagctcagagtggggaacaggtaccggctgggccggaagatcggcagcggg 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 gccgccatggagctcagagtggggaacaggtaccggctgggccggaagatcggcagcggg 94
Query: 163 tccttcggagacatctatctcggtacggacattgctgcgggagaagaagttgccatcaag 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tccttcggagacatctatctcggtacggacattgctgcgggagaagaagttgccatcaag 154
Query: 223 cttgaatgtgtcaaaactaagcaccctcagctccacatcgagagcaaaatctacaagatg 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 cttgaatgtgtcaaaactaagcaccctcagctccacatcgagagcaaaatctacaagatg 214
Query: 283 atgcagggaggagtgggcatccccaccatccggtggtgtggggccgagggcgactacaac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atgcagggaggagtgggcatccccaccatccggtggtgtggggccgagggcgactacaac 274
Query: 343 gtcatggtcatggagctgctggggcccagcctggaggacctcttcaacttctgctccagg 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtcatggtcatggagctgctggggcccagcctggaggacctcttcaacttctgctccagg 334
Query: 403 aagttcagcctcaagaccgtcctgctgctcgctgaccagatgatcagccgcatcgagtac 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aagttcagcctcaagaccgtcctgctgctcgctgaccagatgatcagccgcatcgagtac 394
Query: 463 atccactcgaagaacttcatccaccgggacgtgaagccggacaacttcctcatggggctg 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atccactcgaagaacttcatccaccgggacgtgaagccggacaacttcctcatggggctg 454
Query: 523 ggcaagaagggcaacctggtgtacatcatcgacttcgggctggccaagaagtaccgggac 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggcaagaagggcaacctggtgtacatcatcgacttcgggctggccaagaagtaccgggac 514
Query: 583 gcccgcacccaccagcacatcccctaccgcgagaacaagaacctcaccggcaccgcgcgc 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gcccgcacccaccagcacatcccctaccgcgagaacaagaacctcaccggcaccgcgcgc 574
Query: 643 tacgcctccatcaacacgcacctcggcatcgaacaatctcggagggacgacctggaatct 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tacgcctccatcaacacgcacctcggcatcgaacaatctcggagggacgacctggaatct 634
Query: 703 ctgggctacgtgctcatgtacttcaacctgngctcgctgccctggcagggcctgaangcg 762
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 635 ctgggctacgtgctcatgtacttcaacctgggctcgctgccctggcagggcctgaaggcg 694
Query: 763 gccatccagcgccagaagtacgagcgcatcagcgagaagaagatgtccacgcccatcgag 822
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gccaccaagcgccagaagtacgagcgcatcagcgagaagaagatgtccacgcccatcgag 754
Query: 823 gtgctctgncaaggctacccctccgagttcgccacgtacctgaacttctgccgtt-ccct 881
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 755 gtgctctgcaaaggctacccctccgagttcgccacgtacctgaacttctgccgttcccct 814
Query: 882 gcgctttgatgacaagcctgactactcctacct 914
||||||||||||||||||||||||||| |||||
Sbjct: 815 gcgctttgatgacaagcctgactactcgtacct 847
>gnl|UG|Hs#S5518205 Homo sapiens casein kinase 1, epsilon (CSNK1E),
transcript variant 1, mRNA /cds=p(262,1512) /gb=NM_152221
/gi=40549400 /ug=Hs.474833 /len=2820
Length = 2820
Score = 787 bits (397), Expect = 0.0
Identities = 740/854 (86%), Gaps = 1/854 (0%)
Strand = Plus / Plus
Query: 106 gccatggagctcagagtggggaacaggtaccggctgggccggaagatcggcagcgggtcc 165
||||||||||| | |||||||||| |||||| ||||| ||||||||||| |||||||||
Sbjct: 259 gccatggagctacgtgtggggaacaagtaccgcctgggacggaagatcgggagcgggtcc 318
Query: 166 ttcggagacatctatctcggtacggacattgctgcgggagaagaagttgccatcaagctt 225
|||||||| ||||| || ||| | |||| || | || || ||||| |||||||||||
Sbjct: 319 ttcggagatatctacctgggtgccaacatcgcctctggtgaggaagtcgccatcaagctg 378
Query: 226 gaatgtgtcaaaactaagcaccctcagctccacatcgagagcaaaatctacaagatgatg 285
|| ||||| || || |||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct: 379 gagtgtgtgaagacaaagcacccccagctgcacatcgagagcaagttctacaagatgatg 438
Query: 286 cagggaggagtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtc 345
||||| || ||||| ||||| ||||| |||||| || || |||||||||||||||||
Sbjct: 439 cagggtggcgtggggatcccgtccatcaagtggtgcggagctgagggcgactacaacgtg 498
Query: 346 atggtcatggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaag 405
||||||||||||||||||||||| ||||| |||||||| ||||||||||| ||| | ||
Sbjct: 499 atggtcatggagctgctggggcctagcctcgaggacctgttcaacttctgttcccgcaaa 558
Query: 406 ttcagcctcaagaccgtcctgctgctcgctgaccagatgatcagccgcatcgagtacatc 465
|||||||||||||| || ||||| | || |||||||||||||||||||||||||| |||
Sbjct: 559 ttcagcctcaagacggtgctgctcttggccgaccagatgatcagccgcatcgagtatatc 618
Query: 466 cactcgaagaacttcatccaccgggacgtgaagccggacaacttcctcatggggctgggc 525
||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 619 cactccaagaacttcatccaccgggacgtcaagcccgacaacttcctcatggggctgggg 678
Query: 526 aagaagggcaacctggtgtacatcatcgacttcgggctggccaagaagtaccgggacgcc 585
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 679 aagaagggcaacctggtctacatcatcgacttcggcctggccaagaagtaccgggacgcc 738
Query: 586 cgcacccaccagcacatcccctaccgcgagaacaagaacctcaccggcaccgcgcgctac 645
||||||||||||||||| |||||||| || ||||||||||| |||||||| || ||||||
Sbjct: 739 cgcacccaccagcacattccctaccgggaaaacaagaacctgaccggcacggcccgctac 798
Query: 646 gcctccatcaacacgcacctcggcatcgaacaatctcggagggacgacctggaatctctg 705
|| ||||||||||||||||| ||||| || ||| || | || |||||||| |||
Sbjct: 799 gcttccatcaacacgcacctgggcattgagcaaagccgtcgagatgacctggagagcctg 858
Query: 706 ggctacgtgctcatgtacttcaacctgngctcgctgccctggcagggcctgaangcggcc 765
||||||||||||||||||||||||||| |||| |||||||||||||| || || || |||
Sbjct: 859 ggctacgtgctcatgtacttcaacctgggctccctgccctggcaggggctcaaagcagcc 918
Query: 766 atccagcgccagaagtacgagcgcatcagcgagaagaagatgtccacgcccatcgaggtg 825
| | ||||||||||||| || || |||||||||||||||||||| ||||||||||||||
Sbjct: 919 accaagcgccagaagtatgaacggatcagcgagaagaagatgtcaacgcccatcgaggtc 978
Query: 826 ctctgncaaggctacccctccgagttcgccacgtacctgaacttctgccgttccctgcgc 885
||||| ||||||| |||||||| ||| | || ||||| ||||||||||| ||||||||
Sbjct: 979 ctctgcaaaggctatccctccgaattctcaacatacctcaacttctgccgctccctgcgg 1038
Query: 886 tttgatgacaagcctgactactcctacctgaagcagctcttccggaacctgttccacc-g 944
||||| |||||||| |||||||| ||||| ||||||||||| ||||| ||||||| |
Sbjct: 1039 tttgacgacaagcccgactactcttacctacgtcagctcttccgcaacctcttccaccgg 1098
Query: 945 cagggcttctccta 958
||||||||||||||
Sbjct: 1099 cagggcttctccta 1112
>gnl|UG|Bt#S22247476 CR849891 Normalized and Subtracted bovine
endometrium tissues (bcbp) Bos taurus cDNA clone
bcbp0002c.m.22 5', mRNA sequence /clone=bcbp0002c.m.22
/clone_end=5' /gb=CR849891 /gi=54564762 /ug=Bt.28499
/len=791
Length = 791
Score = 630 bits (318), Expect = e-179
Identities = 475/527 (90%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 436 gaccagatgatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtg 495
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 10 gaccagatgatcagccgcattgagtacatccactccaagaacttcatccaccgggacgtc 69
Query: 496 aagccggacaacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgac 555
||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct: 70 aagcctgacaacttcctcatggggctggggaagaagggcaacttggtgtacatcattgac 129
Query: 556 ttcgggctggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgag 615
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 130 ttcggcctggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgggaa 189
Query: 616 aacaagaacctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcgaa 675
||||||||| | || ||||| || |||||||||||||||||||| ||||| ||||||||
Sbjct: 190 aacaagaacttgactggcactgcccgctacgcctccatcaacacccacctgggcatcgag 249
Query: 676 caatctcggagggacgacctggaatctctgggctacgtgctcatgtacttcaacctgngc 735
||| || | ||||||||||| |||||||||||| |||||||||||||||||| ||
Sbjct: 250 caaagccgtcgagacgacctggagagtctgggctacgttctcatgtacttcaacctgggc 309
Query: 736 tcgctgccctggcagggcctgaangcggccatccagcgccagaagtacgagcgcatcagc 795
|| ||||||||||||||||| || || |||| | ||||||||||||||||||| ||||||
Sbjct: 310 tccctgccctggcagggcctcaaagcagccaccaagcgccagaagtacgagcggatcagc 369
Query: 796 gagaagaagatgtccacgcccatcgaggtgctctgncaaggctacccctccgagttcgcc 855
|||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||
Sbjct: 370 gagaagaagatgtcaacgcccatcgaggtcctctgcaaaggctacccctccgagttctcc 429
Query: 856 acgtacctgaacttctgccgttccctgcgctttgatgacaagcctgactactcctacctg 915
|| ||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 430 acatacctcaacttctgccgttcgctgcggtttgatgacaagcccgactactcctacctg 489
Query: 916 aagcagctcttccggaacctgttccacc-gcagggcttctcctacga 961
||||||||||| ||||| ||||||| ||||||||||||||||||
Sbjct: 490 cgccagctcttccgcaacctcttccaccggcagggcttctcctacga 536
>gnl|UG|Hs#S16883841 Homo sapiens cDNA FLJ46820 fis, clone
TSTOM2001571, highly similar to Casein kinase I, delta
isoform (EC 2.7.1.-) /gb=AK128863 /gi=34536442
/ug=Hs.477070 /len=3170
Length = 3170
Score = 513 bits (259), Expect = e-144
Identities = 452/516 (87%), Gaps = 1/516 (0%)
Strand = Plus / Plus
Query: 444 gatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaagccgga 503
|||||| |||||||| ||||| || || |||||||||||||||||||| |||||||| ||
Sbjct: 1714 gatcagtcgcatcgaatacattcattcaaagaacttcatccaccgggatgtgaagccaga 1773
Query: 504 caacttcctcatggggctgggcaagaagggcaacctggtgtacatcatcgacttcgggct 563
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 caacttcctcatgggcctggggaagaagggcaacctggtgtacatcatcgacttcgggct 1833
Query: 564 ggccaagaagtaccgggacgcccgcacccaccagcacatcccctaccgcgagaacaagaa 623
|||||||||||||||||| || ||||||||||||||||||||||| || |||||||||||
Sbjct: 1834 ggccaagaagtaccgggatgcacgcacccaccagcacatcccctatcgtgagaacaagaa 1893
Query: 624 cctcaccggcaccgcgcgctacgcctccatcaacacgcacctcggcatcgaacaatctcg 683
|||||| || || ||||| ||||||||||||||||||||||| || || |||||||| ||
Sbjct: 1894 cctcacggggacggcgcggtacgcctccatcaacacgcaccttggaattgaacaatcccg 1953
Query: 684 gagggacgacctggaatctctgggctacgtgctcatgtacttcaacctgngctcgctgcc 743
|| || ||| |||| ||||||||||||||||| ||||||||||||||| |||| || ||
Sbjct: 1954 aagagatgacttggagtctctgggctacgtgctaatgtacttcaacctgggctctctccc 2013
Query: 744 ctggcagggcctgaangcggccatccagcgccagaagtacgagcgcatcagcgagaagaa 803
||||||||| ||||| || |||| | || | ||||| ||||| | || |||||||||||
Sbjct: 2014 ctggcaggggctgaaggctgccaccaagagacagaaatacgaaaggattagcgagaagaa 2073
Query: 804 gatgtccacgcccatcgaggtgctctgncaaggctacccctccgagttcgccacgtacct 863
|||||||| |||||||| ||| | || |||||||||| ||||| || ||||| |||||
Sbjct: 2074 aatgtccacccccatcgaagtgttgtgtaaaggctacccttccgaatttgccacatacct 2133
Query: 864 gaacttctgccgttccctgcgctttgatgacaagcctgactactcctacctgaagcagct 923
||| |||||||||||| |||| ||||| ||||||||||||||||| |||||| ||||||
Sbjct: 2134 gaatttctgccgttccttgcgttttgacgacaagcctgactactcgtacctgcggcagct 2193
Query: 924 cttccggaacctgttccaccg-cagggcttctccta 958
|||||||| |||||||| || ||||||||||||||
Sbjct: 2194 tttccggaatctgttccatcgccagggcttctccta 2229
>gnl|UG|Bt#S11999909 340518 BARC 5BOV Bos taurus cDNA 5', mRNA
sequence /clone_end=5' /gb=BG691369 /gi=13933189
/ti=444768028 /ug=Bt.5485 /len=873
Length = 873
Score = 400 bits (202), Expect = e-110
Identities = 268/290 (92%)
Strand = Plus / Plus
Query: 103 gccgccatggagctcagagtggggaacaggtaccggctgggccggaagatcggcagcggg 162
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gccgccatggagcttagagtggggaacaggtaccggctgggccggaagatcggcagcggc 140
Query: 163 tccttcggagacatctatctcggtacggacattgctgcgggagaagaagttgccatcaag 222
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 141 tccttcggagacatctatctcggtacggacattgctgcaggagaagaagttgccatcaag 200
Query: 223 cttgaatgtgtcaaaactaagcaccctcagctccacatcgagagcaaaatctacaagatg 282
||||||||||||| ||| || ||||||||||||||||| ||||||||||||||| | |||
Sbjct: 201 cttgaatgtgtcagaaccaaacaccctcagctccacattgagagcaaaatctactaaatg 260
Query: 283 atgcagggaggagtgggcatccccaccatccggtggtgtggggccgagggcgactacaac 342
||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||
Sbjct: 261 atgcagggaggagtgggcatccccaccatccggtggtgtcgggctgagggggactacaac 320
Query: 343 gtcatggtcatggagctgctggggcccagcctggaggacctcttcaactt 392
||||||| || | ||| || | |||||||||||||||| || ||||||
Sbjct: 321 gtcatggggatcaaactgttgcgacccagcctggaggacccctacaactt 370
>gnl|UG|Mm#S10869622 Mus musculus adult male urinary bladder cDNA,
RIKEN full-length enriched library, clone:9530058P14
product:casein kinase 1, epsilon, full insert sequence
/gb=AK035516 /gi=26084659 /ug=Mm.30199 /len=3770
Length = 3770
Score = 165 bits (83), Expect = 5e-39
Identities = 134/151 (88%)
Strand = Plus / Minus
Query: 294 agtgggcatccccaccatccggtggtgtggggccgagggcgactacaacgtcatggtcat 353
|||||| ||||| ||||| |||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 2644 agtggggatcccgtccatcaagtggtgcggggctgagggagactataacgtgatggtcat 2585
Query: 354 ggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttcagcct 413
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 2584 ggagctgctggggcccagcctggaggacctcttcaacttctgttcccggaagttcagcct 2525
Query: 414 caagaccgtcctgctgctcgctgaccagatg 444
|||||| || ||| |||| || |||||||||
Sbjct: 2524 caagacggtgctgttgctggccgaccagatg 2494
Score = 87.7 bits (44), Expect = 1e-15
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 208 gaagttgccatcaagcttgaatgtgtcaaaactaagcaccctcagctccacatcgagagc 267
||||| ||||||||||| |||||||| || || || || || ||||||||||||||||||
Sbjct: 2915 gaagtagccatcaagctcgaatgtgtgaagacgaaacatccccagctccacatcgagagc 2856
Query: 268 aaaatctacaagatgatgcagggaggag 295
|| ||||||||||||||||||| ||||
Sbjct: 2855 aagttctacaagatgatgcagggcggag 2828
>gnl|UG|Hs#S16592238 Homo sapiens casein kinase I gamma 2 primary
transcript, complete cds /gb=AF001177 /gi=2199528
/ug=Hs.181390 /len=2773
Length = 2773
Score = 69.9 bits (35), Expect = 2e-10
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 337 tacaacgtcatggtcatggagctgctggggcccagcctggaggacct 383
||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 1585 tacaacgccatggtgctggagctgctggggcccagcctggaggacct 1631
Score = 67.9 bits (34), Expect = 9e-10
Identities = 103/126 (81%)
Strand = Plus / Plus
Query: 545 acatcatcgacttcgggctggccaagaagtaccgggacgcccgcacccaccagcacatcc 604
|||||||||||||||||||||||||| ||||| ||| || ||| | |||||||||
Sbjct: 1799 acatcatcgacttcgggctggccaaggagtacatcgaccccgagaccaagaagcacatcc 1858
Query: 605 cctaccgcgagaacaagaacctcaccggcaccgcgcgctacgcctccatcaacacgcacc 664
| ||||||||| |||||| ||| || ||||| ||||||||| ||||||||||||||
Sbjct: 1859 cgtaccgcgagcacaagagcctgacgggcacggcgcgctacatgagcatcaacacgcacc 1918
Query: 665 tcggca 670
| ||||
Sbjct: 1919 tgggca 1924
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 809 ccacgcccatcgaggtgctctg 830
||||||||||||||||||||||
Sbjct: 2063 ccacgcccatcgaggtgctctg 2084
>gnl|UG|Mm#S17971788 Mus musculus casein kinase 1, gamma 2, mRNA (cDNA
clone IMAGE:6821458), partial cds /gb=BC063083
/gi=38969918 /ug=Mm.29873 /len=4192
Length = 4192
Score = 69.9 bits (35), Expect = 2e-10
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 337 tacaacgtcatggtcatggagctgctggggcccagcctggaggacct 383
||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 1957 tacaacgccatggtgctggagctgctggggcccagcctggaggacct 2003
Score = 48.1 bits (24), Expect = 9e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 545 acatcatcgacttcgggctggccaagaagtac 576
||||||||||||| |||||||||||| |||||
Sbjct: 2171 acatcatcgactttgggctggccaaggagtac 2202
Score = 38.2 bits (19), Expect = 0.82
Identities = 61/75 (81%)
Strand = Plus / Plus
Query: 438 ccagatgatcagccgcatcgagtacatccactcgaagaacttcatccaccgggacgtgaa 497
|||| |||||| ||||| |||||| | ||| | |||| | ||||| |||| ||||||||
Sbjct: 2058 ccagctgatcacgcgcatggagtacgtgcacaccaagagcctcatctaccgtgacgtgaa 2117
Query: 498 gccggacaacttcct 512
||| || ||||||||
Sbjct: 2118 gcccgagaacttcct 2132
>gnl|UG|Mm#S10857618 Mus musculus 0 day neonate skin cDNA, RIKEN
full-length enriched library, clone:4632404G05
product:CASEIN KINASE I, ALPHA ISOFORM (EC 2.7.1.-)
(CKI-ALPHA) (CK1) homolog [Bos taurus], full insert
sequence /gb=AK076264 /gi=26096697 /ug=Mm.26908
/len=3053
Length = 3053
Score = 65.9 bits (33), Expect = 4e-09
Identities = 84/101 (83%)
Strand = Plus / Plus
Query: 349 gtcatggagctgctggggcccagcctggaggacctcttcaacttctgctccaggaagttc 408
|||||||| || ||||| |||||||| || ||||||||||||||||| || |||| ||||
Sbjct: 695 gtcatggatctcctgggacccagccttgaagacctcttcaacttctgttcaaggaggttc 754
Query: 409 agcctcaagaccgtcctgctgctcgctgaccagatgatcag 449
| | |||||||| || || | |||||||||||||||||
Sbjct: 755 actatgaagaccgtacttatgttagctgaccagatgatcag 795
>gnl|UG|Ssc#S22286632 CJ029362 full-length enriched swine cDNA
library, adult trachea Sus scrofa cDNA clone
TCH01C020095 5', mRNA sequence /clone=TCH01C020095
/clone_end=5' /gb=CJ029362 /gi=54542407 /ug=Ssc.21784
/len=872
Length = 872
Score = 54.0 bits (27), Expect = 1e-05
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 596 agcacatcccctaccgcgagaacaagaacctcaccggcaccgcgcgctacgcctccatca 655
|||||||||| ||||||||| |||||| ||| || ||||| ||||||||| |||||
Sbjct: 48 agcacatcccgtaccgcgagcacaagagcctgacgggcacggcgcgctacatgagcatca 107
Query: 656 acacgcacctcggca 670
|||||||||| ||||
Sbjct: 108 acacgcacctgggca 122
Score = 36.2 bits (18), Expect = 3.2
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 809 ccacgcccatcgaggtgctctg 830
|||||||||| |||||||||||
Sbjct: 261 ccacgcccattgaggtgctctg 282
Database: UniGene(Bt+Hs+Ssc+Mm)
Posted date: Mar 18, 2005 8:01 PM
Number of letters in database: 222,131,506
Number of sequences in database: 151,043
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 1164
length of database: 222,131,506
effective HSP length: 19
effective length of query: 1145
effective length of database: 219,261,689
effective search space: 251054633905
effective search space used: 251054633905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)