[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20030826C-002929
Length:
878
Sequence:
[FASTA format sequence]
AGCAGCGTCA TGGCGCGCTT CTTCCGCGCG GGCCCGGGCT TACCCTTCCG AGAGGTGCTC
TCGCGGGCAG TGTGGGGTCG TGCCGACAAT GGCGGCCTCA GCCCGAAGGT CGGAACCGGA
GACGCAGGGT CCCTTACAAA GCGTGAGCCG TTCCTCTCCA AGAGTGAGTG GCAAAAGAAG
CTGACTCCAG AGCAATTCCA CGTCACGAGA GAAAAAGGGA CAGAACCGCC TTTCAGTGGG
ACCTACCTGA ATAACAAGGA AGCAGGAATG TATCACTGTG TGTGCTGTGA CAGCCCACTC
TTCAGCTCTG AGAAAAAGTA CTGCTCTGGC ACTGGATGGC CTTCATTTTC TGAGGCTCAC
GGCACATCTG GCTCTGATGA GAGTGACACA GGGATCCTGA GACGTGTGGA CACCTCGCTG
GGAACAGCTC GCACGGAGGT TGTCTGCAAG CAGTGCGAAG CTCACCTTGG CCATGTGTTT
CCTGATGGAC CTGGGCCTAC AGGTCAGAGG TTTTGCATCA ACAGTGTGGC ACTCAAGTTC
AAACCAAGGA AACACTGACC ATCGCCAGGA GTCCCTTTCT CTTCCACCCT CTCATTTCCA
AACTCGATTT TCATAATTTA TGCAAATGAC TAGTTTTATT AATGACCAAA CTAGGCTAAG
CTTGCTGGCA TACCTTCTCT AATTCATTAC CTGGAGTCAG CTCCACCCTG GCTCTGGCTC
TGGCTAGAAT TTCACGGAAT GACAGAGGGG CAGTCCTTTC CCTTAATCAA CATCTGTGGG
CTTTGCCAGG ACCAGAGGGC ATGACTCTTT GGGGACATTA GGAGGCTGAT GGATAAGCCA
AAGAACTCCT ATAAAACTAT GCTGAATTTT CCATTGCA
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | MSRB2 | pilin-like transcription factor | 294 | 5e-80 | |
|
|
| SEPX1 | selenoprotein X, 1; selenoprotein R | 51.6 | 5e-07 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Msrb2 | pilin-like transcription factor | 273 | 5e-74 | O |
|
|
| Msrb3 | RIKEN cDNA D430026P16 gene | 141 | 3e-34 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | UNL-P-FN-bi-d-04-0-UNL.s1 UNL-P-FN Sus scrofa cDNA clone UNL-P-FN-bi-d-04-0-UNL 3', mRNA sequence | 728 | 0.0 | |
|
|
| Homo sapiens pilin-like transcription factor (PILB), mRNA | 480 | e-134 | |
|
|
| UI-E-CL1-afb-a-16-0-UI.s1 UI-E-CL1 Homo sapiens cDNA clone UI-E-CL1-afb-a-16-0-UI 3', mRNA sequence | 416 | e-115 | |
|
|
| Mus musculus pilin-like transcription factor (Pilb-pending), mRNA | 272 | 3e-71 | O |
|
|
| UNL-P-FN-cu-b-04-0-UNL.s1 UNL-P-FN Sus scrofa cDNA clone UNL-P-FN-cu-b-04-0-UNL 3', mRNA sequence | 248 | 4e-64 | |
|
|
| 481179 MARC 2BOV Bos taurus cDNA 5', mRNA sequence | 75.8 | 3e-12 | |
|
|
| Mus musculus RIKEN cDNA 2700064H14 gene (2700064H14Rik), mRNA | 40.1 | 0.18 | |
|
|
| 122300 MARC 1PIG Sus scrofa cDNA 5', mRNA sequence | 40.1 | 0.18 | |
|
|
| uq21f09.x1 Ren Stubbs mouse thymus Mus musculus cDNA clone IMAGE:2803145 3'. | 38.2 | 0.71 | |
|
|
| Mus musculus PAX interacting (with transcription-activation domain) protein 1 (Paxip1), mRNA | 38.2 | 0.71 |
|
20030826C-002929 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
TCH01_0043_A11.b.ab1 : tttttggctagtgacttnacagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0027_F12.b.ab1 : ggggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20030826C-002929 : ............................AGCAGCGTCATGGCGCGCTTCTTCCGCGCGGG
---------+---------+---------+---------+---------+---------+ 32
TCH01_0043_A11.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxAGCAGCGTCATGGCGCGCTTCTTCCGCGCGGG
OVR01_0027_F12.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxAGCAGCGTCATGGCGCGCTTCTTCCGCGCGGG
20030826C-002929 : CCCGGGCTTACCCTTCCGAGAGGTGCTCTCGCGGGCAGTGTGGGGTCGTGCCGACAATGG
---------+---------+---------+---------+---------+---------+ 92
TCH01_0043_A11.b.ab1 : CCCGGGCTTACCCTTCCGAGAGGTGCTCTCGCGGGCAGTGTGGGGTCGTGCCGACAATGG
OVR01_0027_F12.b.ab1 : CCCGGGCTTACCCTTCCGAGAGGTGCTCTCGCGGGCAGTGTGGGGTCGTGCCGACAATGG
20030826C-002929 : CGGCCTCAGCCCGAAGGTCGGAACCGGAGACGCAGGGTCCCTTACAAAGCGTGAGCCGTT
---------+---------+---------+---------+---------+---------+ 152
TCH01_0043_A11.b.ab1 : CGGCCTCAGCCCGAAGGTCGGAACCGGAGACGCAGGGTCCCTTACAAAGCGTGAGCCGTT
OVR01_0027_F12.b.ab1 : CGGCCTCAGCCCGAAGGTCGGAACCGGAGACGCAGGGTCCCTTACAAAGCGTGAGCCGTT
20030826C-002929 : CCTCTCCAAGAGTGAGTGGCAAAAGAAGCTGACTCCAGAGCAATTCCACGTCACGAGAGA
---------+---------+---------+---------+---------+---------+ 212
TCH01_0043_A11.b.ab1 : CCTCTCCAAGAGTGAGTGGCAAAAGAAGCTGACTCCAGAGCAATTCCACGTCACGAGAGA
OVR01_0027_F12.b.ab1 : CCTCTCCAAGAGTGAGTGGCAAAAGAAGCTGACTCCAGAGCGATTCCACGTCACGAGAGA
20030826C-002929 : AAAAGGGACAGAACCGCCTTTCAGTGGGACCTACCTGAATAACAAGGAAGCAGGAATGTA
---------+---------+---------+---------+---------+---------+ 272
TCH01_0043_A11.b.ab1 : AAAAGGGACAGAACCGCCTTTCAGTGGGACCTACCTGAATAACAAGGAAGCAGGAATGTA
OVR01_0027_F12.b.ab1 : AAAAGGGACAGAACCGCCTTTCAGTGGGACCTACCTGAATAACAAGGAAGCAGGAATGTA
20030826C-002929 : TCACTGTGTGTGCTGTGACAGCCCACTCTTCAGCTCTGAGAAAAAGTACTGCTCTGGCAC
---------+---------+---------+---------+---------+---------+ 332
TCH01_0043_A11.b.ab1 : TCACTGTGTGTGCTGTGACAGCCCACTCTTCAGCTCTGAGAAAAAGTACTGCTCTGGCAC
OVR01_0027_F12.b.ab1 : TCACTGTGTGTGCTGTGACAGCCCACTCTTCAGCTCTGAGAAAAAGTACTGCTCTGGCAC
20030826C-002929 : TGGATGGCCTTCATTTTCTGAGGCTCACGGCACATCTGGCTCTGATGAGAGTGACACAGG
---------+---------+---------+---------+---------+---------+ 392
TCH01_0043_A11.b.ab1 : TGGATGGCCTTCATTTTCTGAGGCTCACGGCACATCTGGCTCTGATGAGAGTGACACAGG
OVR01_0027_F12.b.ab1 : TGGATGGCCTTCATTTTCTGAGGCTCACGGCACATCTGGCTCTGATGAGAGTGACACAGG
20030826C-002929 : GATCCTGAGACGTGTGGACACCTCGCTGGGAACAGCTCGCACGGAGGTTGTCTGCAAGCA
---------+---------+---------+---------+---------+---------+ 452
TCH01_0043_A11.b.ab1 : GATCCTGAGACGTGTGGACACCTCGCTGGGAACAGCTCGCACGGAGGTTGTCTGCAAGCA
OVR01_0027_F12.b.ab1 : GATCCTGAGACGTGTGGACACCTCGCTGGGAACAGCTCGCACGGAGGTTGTCTGCAAGCA
20030826C-002929 : GTGCGAAGCTCACCTTGGCCATGTGTTTCCTGATGGACCTGGGCCTACAGGTCAGAGGTT
---------+---------+---------+---------+---------+---------+ 512
TCH01_0043_A11.b.ab1 : GTGCGAAGCTCACCTTGGCCATGTGTTTCCTGATGGACCTGGGCCTACAGGTCAGAGGTT
OVR01_0027_F12.b.ab1 : GTGCGAAGCTCACCTTGGCCATGTGTTTCCTGATGGACCTGGGCCTACAGGTCAGAGGTT
20030826C-002929 : TTGCATCAACAGTGTGGCACTCAAGTTCAAACCAAGGAAACACTGACCATCGCCAGGAGT
---------+---------+---------+---------+---------+---------+ 572
TCH01_0043_A11.b.ab1 : TTGCATCAACAGTGTGGCACTCAAGTTCAAACCAAGGAAACACTGACCATCGCCAGGAGT
OVR01_0027_F12.b.ab1 : TTGCATCAACAGTGTGGCACTCAAGTTCAAACCAAGGAAACACTGACCATCGCCAGGAGT
20030826C-002929 : CCCTTTCTCTTCCACCCTCTCATTTCCAAACTCGATTTTCATAATTTATGCAAATGACTA
---------+---------+---------+---------+---------+---------+ 632
TCH01_0043_A11.b.ab1 : CCCTTTCTCTTCCACCCTCTCATTTCCAAACTCGATTTTCATAATTTATGCAAATGACTA
OVR01_0027_F12.b.ab1 : CCCTTTCTCTTCCACCCTCTCATTTCCAAACTCGATTTTCATAATTTATGCAAATGACTA
20030826C-002929 : GTTTTATTAATGACCAAACTAGGCTAAGCTTGCTGGCATACCTTCTCTAATTCATTACCT
---------+---------+---------+---------+---------+---------+ 692
TCH01_0043_A11.b.ab1 : GTTTTATTAATGACCAAACTAGGCTAAGCTTGCTGGCATACCTTCTCTAATTCATTACCT
OVR01_0027_F12.b.ab1 : GTTTTATTAATGACCAAACTAGGCTAAGCTTGCTGGCATACCTTCTCTAATTCATTACCT
20030826C-002929 : GGAGTCAGCTCCACCCTGGCTCTGGCTCTGGCTAGAATTTCACGGAATGACAGAGGGGCA
---------+---------+---------+---------+---------+---------+ 752
TCH01_0043_A11.b.ab1 : GGAGTCAGCTCCACCCTGGCTCTGGCTCTGGCTAGAATTTCACGGAATGACAGAGGGGCA
OVR01_0027_F12.b.ab1 : GGAGTCAGCTCCACCCTGGCTCTGGCTCTGACTAGAATTTCACGGAATGACAGAGGGGCA
20030826C-002929 : GTCCTTTCCCTTAA*TCAACATCTGTGGGC*TTTGCC*AGGACCAGAGGGCATGACTC*T
---------+---------+---------+---------+---------+---------+ 808
TCH01_0043_A11.b.ab1 : GTCCTTTCCCTTAA*TCAACATCTGTGGGC*TTTGCC*AGGACCAGAGGGCATGACTC*T
OVR01_0027_F12.b.ab1 : GTCCTTTCCCTTAAATCAACATCTGTGGGCTTTTGCCCAGGACCAGAGGGCATGACTCTT
20030826C-002929 : TTGGGGACATTAGGAGGCTGATGGATAAGCCAAAGAACTCCTATAAAACTATGCTGAATT
---------+---------+---------+---------+---------+---------+ 868
TCH01_0043_A11.b.ab1 : TTGGGGACATTAGGAGGCTGATGGATAAGCCAAAGAACTCCTATAAAACTATGCTGAATT
OVR01_0027_F12.b.ab1 : TTGGGGACATTANGAGGCTGATGGATAAGCCAAAGAACTCCTATAAAACTATGCTGAATT
20030826C-002929 : TTCCATTGCA..................................................
---------+---------+---------+---------+---------+---------+ 878
TCH01_0043_A11.b.ab1 : TTCCATTGCAgtcaagtggttcacagacatgtataggtgagagggtcaacgagaagaggg
OVR01_0027_F12.b.ab1 : TTCCATTGCAgtcaagtgtttcacaaacttgtataggtgagaaggtcaaacgaaaagagg
20030826C-002929 : ............................................................
---------+---------+---------+---------+---------+---------+ 878
TCH01_0043_A11.b.ab1 : atgaaaatacgggatgaggatgatccaccgtcccagtgtggaaaagcaataaggaggcag
OVR01_0027_F12.b.ab1 : aatgaaaatacgggatgaagattatccacagtcccagtggtgaaaaaggcaattaaggag
20030826C-002929 : ............................................................
---------+---------+---------+---------+---------+---------+ 878
TCH01_0043_A11.b.ab1 : gtttgtggaccacctgcttttgggaaggccatggtggggatcccggggaagcaggaaatt
OVR01_0027_F12.b.ab1 : ggagggtttggggaccaaacttgcgttttgggggagggcccattgtggggggatcccccg
20030826C-002929 : ............................................................
---------+---------+---------+---------+---------+---------+ 878
TCH01_0043_A11.b.ab1 : tttccaaaacctttaacggtcttaaaattcaattccacctctctaccgcaactattttaa
OVR01_0027_F12.b.ab1 : gggaaatgccggggaaaattttttttccccaaaaac
20030826C-002929 : ............................................................
---------+---------+---------+---------+---------+---------+ 878
TCH01_0043_A11.b.ab1 : ggggcgttgtaaaccttaggaaaagaaaacaagggctcaaaagttacctttaaaggtcaa
OVR01_0027_F12.b.ab1 :
20030826C-002929 : ............................................................
---------+---------+---------+---------+---------+---------+ 878
TCH01_0043_A11.b.ab1 : taaa
OVR01_0027_F12.b.ab1 :
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