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[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]

Assembly Name:  20050322C-001377

Length: 1,273

Sequence:  [FASTA format sequence]
GCAGACTGGT TTAAATTACC CACCAGGAAA TATGTGGCTG TAGGAGTATG CTTAATTCAT
GCTCATTGAA AGTGAGCCAG GGCTGTTTTC TCCCCCTCCC TCCTTGCCTC CCGGTTCATA
TAACCCCCGC TGCCTCCAGC CTGCCTTTGC CCACTTGACT TGCTGGCCCT GAGCACGGAG
AGGTGCAGGG AGAATCTGAG AATGGGCACG TTCTTCTCTG AGACAGGGTG GCTCTGCCTG
ACTGTCACGG CAGTGCTGGG AGCAGTAATT CTTTGCAAAC TCAAGAAGAA CCACAGGCAG
GAGGGCAGAA AGATGGTCTG CCTGGCTGGC CTCTGGGGAG GGGCTTGCCT GCTCAGCCTC
TCTCTCTTCT GGGGCTTGAT CCTCTTCTCC CTGTCATGTT TTCTCATGTA TGCTTACTTT
TCTGGCCAAG AGTTTTTACC TGTGGATCAA AAGGCGGTGC TGATCACAGG TGGCGATTCT
GGGATTGGCC ATGCTTTGTC CAAGTATCTG GATAAGCTGG GATTCACAGT ATTTGCTGGA
GTTCTGGATG AAAAGGGATC AGGAGCAGAG GAACTACGAA GAACCTGCTC CAAGCACCTG
TCTGTGCTCC AGCTGGACAT CACCAACTCG CAGCAGATAA GAGATGCTCA CAGCAAAGTG
ATGGAAAAGG TGCAGAACAG AGGACTGTGG GCTGTGGTCA ACAACGCAGG GATCCTTGGC
TTCCCAATCG ATGGGGAGCT CATTCCCATG ACCCAATACA AACGATGCAT GGCCGTGAAC
TTCTTCGGGG CCGTGGAAGT CACCAAGGCA TTTTTGCCTC TTCTTAGGAA ATCCAAGGGC
AGGCTGGTGA ACATCAGCAG CATGGCAGGA GGGGTTCCAA TGGAGAAGAT GGCGGCCTAC
AGCTCAACCA AGGCAGCTCT GACCATGTTT TCGGCAGTCA TGAGAAAAGA GCTATCCAAA
TGGGGAGTTA AAGTCTCTGT CATCCAGCCT GGAAGCTTCC AAACAAACAT CGCAGGCACG
AGTGACCTGT GGGACAAGCT GGAGAAAAAC ATCCTGGATG ACCTCACCCC TAACCTGCAG
GAGGACTACG GCCAGGACTA TATCCTTAAG CAACGCAGTT TTCTCAAGTT CATGAGCAAC
AGCTCTGAAC CGGACGTCTC CCCAGTGCTC CTGGACGTCC AGCATGCCAT CTCTGCTAAG
AGCCCCTATG CATTTTACAC GCCCGAAAAA TGTCTTTTTT GTGGCTCTGC TTTGCTTTCA
TTAGCCCTAC TGT


Assembly Overview:      TOP


BLAST on RefSeq (Human):      TOP
LocusDefinitionScoreE valueFL
Nucleotide ProteinHSD17B2hydroxysteroid (17-beta) dehydrogenase 2442e-124O
Nucleotide ProteinHSD11B2hydroxysteroid (11-beta) dehydrogenase 21955e-50O
Nucleotide ProteinBDH13-hydroxybutyrate dehydrogenase, type 11724e-43O
Nucleotide ProteinBDH13-hydroxybutyrate dehydrogenase, type 11724e-43O
Nucleotide ProteinBDH13-hydroxybutyrate dehydrogenase, type 11724e-43O
Nucleotide ProteinSDR-Oorphan short-chain dehydrogenase / reductase1571e-38O
Nucleotide ProteinDHRS9dehydrogenase/reductase (SDR family) member 91572e-38O
Nucleotide ProteinDHRS9dehydrogenase/reductase (SDR family) member 91572e-38O
Nucleotide ProteinRDH16retinol dehydrogenase 16 (all-trans and 13-cis)1502e-36O
Nucleotide ProteinHSD17B6hydroxysteroid (17-beta) dehydrogenase 61494e-36O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Nucleotide ProteinHsd17b2hydroxysteroid (17-beta) dehydrogenase 2405e-113O
Nucleotide ProteinHsd11b2hydroxysteroid 11-beta dehydrogenase 21962e-50O
Nucleotide ProteinBdh13-hydroxybutyrate dehydrogenase, type 11772e-44O
Nucleotide ProteinRdh7retinol dehydrogenase 71641e-40O
Nucleotide ProteinRdh1retinol dehydrogenase 1 (all trans)1632e-40O
Nucleotide ProteinSdroorphan short chain dehydrogenase/reductase1617e-40O
Nucleotide ProteinRdhsretinol dehydrogenase similar1601e-39O
Nucleotide ProteinBC089597cDNA sequence BC0895971602e-39O
Nucleotide ProteinRdh9retinol dehydrogenase 91595e-39O
Nucleotide ProteinRdh16retinol dehydrogenase 161588e-39O


BLAST on UniGene:      TOP
DefinitionScoreE valueFL
UniGene GenBankBP434140 full-length enriched swine cDNA library, adult lung Sus scrofa cDNA clone LNG010011B03 5', mRNA sequence11380.0
UniGene GenBank4073443 BARC 10BOV Bos taurus cDNA clone 10BOV24_L15 5', mRNA sequence8880.0
UniGene GenBankHomo sapiens mRNA; cDNA DKFZp779N2235 (from clone DKFZp779N2235)564e-06
UniGene GenBankPREDICTED: Homo sapiens hypothetical protein LOC145757 (LOC145757), mRNA38.20.90
UniGene GenBankHomo sapiens ATP-binding cassette, sub-family D (ALD), member 2 (ABCD2), mRNA38.20.90
UniGene GenBankHomo sapiens cDNA FLJ46436 fis, clone THYMU301559238.20.90
UniGene GenBankMus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830016O14 product:hypothetical protein, full insert sequence38.20.90
UniGene GenBankHomo sapiens cadherin-like 23 (CDH23), transcript variant 1, mRNA38.20.90
UniGene GenBankHomo sapiens cDNA FLJ33368 fis, clone BRACE200578738.20.90
UniGene GenBankHomo sapiens cDNA FLJ46395 fis, clone THYMU300335038.20.90


Assembly Members: 10      TOP
LibraryPlateLoc.Read NameAccession
LVR010053A10LVR01_0053_A10.b.ab1BP441682
LVRM10122H12LVRM1_0122_H12.b.ab1BP454610
LVRM10166C07LVRM1_0166_C07.b.ab1CJ004325
LVRM10184D03LVRM1_0184_D03.b.ab1CJ005769
TCH010007H12TCH01_0007_H12.b.ab1CJ023004
TCH010069E08TCH01_0069_E08.b.ab1CJ027384
TCH010078C01TCH01_0078_C01.b.ab1CJ028051
TES010043E11TES01_0043_E11.b.ab1
TES010075G12TES01_0075_G12.b.ab1CJ034852
TES010103F09TES01_0103_F09.b.ab1CJ036793

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
527C400.571WNACA/T
T300.429ATA/I


Alignment:      TOP

20050322C-001377     : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0184_D03.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0122_H12.b.ab1 : nagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0053_A10.b.ab1 : gagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 :
TCH01_0007_H12.b.ab1 :
TES01_0075_G12.b.ab1 :
TES01_0103_F09.b.ab1 :
TES01_0043_E11.b.ab1 :
TCH01_0069_E08.b.ab1 :
20050322C-001377 : .GCAGACTGGTTTAAATTACCCACCAGGAAATATGTGGCTGTAGGAGTATGCTTAATTCA
---------+---------+---------+---------+---------+---------+ 59
LVRM1_0184_D03.b.ab1 : xGCAGACTGGTTTAAATTACCCACCAGGAAATATGTGGCTGTAGGAGTATGCTTAATTCA
LVRM1_0122_H12.b.ab1 : xGCAGACTGGTTTAAATTACCCACCAGGAAATATGTGGCTGTAGGAGTATGCTTAATTCA
LVR01_0053_A10.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggAGGAGTATGCTTAATTCA
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 :
TCH01_0007_H12.b.ab1 :
TES01_0075_G12.b.ab1 :
TES01_0103_F09.b.ab1 :
TES01_0043_E11.b.ab1 :
TCH01_0069_E08.b.ab1 :
20050322C-001377 : TGCTCATTGAAAGTGAGCCAGGGCTGTTTTCTCCCCCTCCCTCCTTGCCTCCCGGTTCAT
---------+---------+---------+---------+---------+---------+ 119
LVRM1_0184_D03.b.ab1 : TGCTCATTGAAAGTGAGCCAGGGCTGTTTTCTCCCCCTCCCTCCTTGCCTCCCGGTTCAT
LVRM1_0122_H12.b.ab1 : TGCTCATTGAAAGTGAGCCAGGGCTGTTTTCTCCCCCTCCCTCCTTGCCTCCCGGTTCAT
LVR01_0053_A10.b.ab1 : TGCTCATTGAAAGTGAGCCAGGGCTGTTTTCTCCCCCTCCCTCCTTGCCTCCCGGTTCAT
LVRM1_0166_C07.b.ab1 : xxxxxxx
TCH01_0078_C01.b.ab1 : nnnngggctgtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0007_H12.b.ab1 : nnnaagatagtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TES01_0075_G12.b.ab1 :
TES01_0103_F09.b.ab1 :
TES01_0043_E11.b.ab1 :
TCH01_0069_E08.b.ab1 :
20050322C-001377 : ATAACCCCCGCTGCCTCCAGCCTGCCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
---------+---------+---------+---------+---------+---------+ 179
LVRM1_0184_D03.b.ab1 : ATAACCCCCGCTGCCTCCAGCCTGCCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
LVRM1_0122_H12.b.ab1 : ATAACCCCCGCTGCCTCCAGCCTGCCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
LVR01_0053_A10.b.ab1 : ATAACCCCCGCTGCCTCCAGCCTGCCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
LVRM1_0166_C07.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
TCH01_0078_C01.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxctTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
TCH01_0007_H12.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxtTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
TES01_0075_G12.b.ab1 : nttatggcggtggctctgcttgCCACTTGACTTGCTGGCCCTGAGCACGGA
TES01_0103_F09.b.ab1 : ttttctactgttgctattgcttgCCACTTGACTTGCTGGCCCTGAGCACGGA
TES01_0043_E11.b.ab1 :
TCH01_0069_E08.b.ab1 :
20050322C-001377 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
---------+---------+---------+---------+---------+---------+ 239
LVRM1_0184_D03.b.ab1 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
LVRM1_0122_H12.b.ab1 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
LVR01_0053_A10.b.ab1 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
LVRM1_0166_C07.b.ab1 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TCH01_0078_C01.b.ab1 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TCH01_0007_H12.b.ab1 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TES01_0075_G12.b.ab1 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TES01_0103_F09.b.ab1 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TES01_0043_E11.b.ab1 :
TCH01_0069_E08.b.ab1 :
20050322C-001377 : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
---------+---------+---------+---------+---------+---------+ 299
LVRM1_0184_D03.b.ab1 : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
LVRM1_0122_H12.b.ab1 : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
LVR01_0053_A10.b.ab1 : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
LVRM1_0166_C07.b.ab1 : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
TCH01_0078_C01.b.ab1 : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
TCH01_0007_H12.b.ab1 : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
TES01_0075_G12.b.ab1 : GACTGTCACAGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
TES01_0103_F09.b.ab1 : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
TES01_0043_E11.b.ab1 : tggcgcaactcagaataccCAGGCA
TCH01_0069_E08.b.ab1 : nnn
20050322C-001377 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
---------+---------+---------+---------+---------+---------+ 359
LVRM1_0184_D03.b.ab1 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
LVRM1_0122_H12.b.ab1 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
LVR01_0053_A10.b.ab1 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
LVRM1_0166_C07.b.ab1 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TCH01_0078_C01.b.ab1 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TCH01_0007_H12.b.ab1 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TES01_0075_G12.b.ab1 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TES01_0103_F09.b.ab1 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TES01_0043_E11.b.ab1 : GGAGGGCAGAAA*ATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TCH01_0069_E08.b.ab1 : nggctagtactaagacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20050322C-001377 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
---------+---------+---------+---------+---------+---------+ 419
LVRM1_0184_D03.b.ab1 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
LVRM1_0122_H12.b.ab1 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
LVR01_0053_A10.b.ab1 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
LVRM1_0166_C07.b.ab1 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TCH01_0078_C01.b.ab1 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TCH01_0007_H12.b.ab1 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TES01_0075_G12.b.ab1 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TES01_0103_F09.b.ab1 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TES01_0043_E11.b.ab1 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TCH01_0069_E08.b.ab1 : xxxxxxxxxxxxxxxxxxxxTCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
20050322C-001377 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
---------+---------+---------+---------+---------+---------+ 479
LVRM1_0184_D03.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
LVRM1_0122_H12.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
LVR01_0053_A10.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
LVRM1_0166_C07.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TCH01_0078_C01.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TCH01_0007_H12.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TES01_0075_G12.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TES01_0103_F09.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TES01_0043_E11.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TCH01_0069_E08.b.ab1 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
20050322C-001377 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
---------+---------+---------+---------+---------+---------+ 539
LVRM1_0184_D03.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
LVRM1_0122_H12.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
LVR01_0053_A10.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
LVRM1_0166_C07.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
TCH01_0078_C01.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCATAGTATTTGCTGG
TCH01_0007_H12.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
TES01_0075_G12.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
TES01_0103_F09.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
TES01_0043_E11.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCATAGTATTTGCTGG
TCH01_0069_E08.b.ab1 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCATAGTATTTGCTGG
20050322C-001377 : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
---------+---------+---------+---------+---------+---------+ 599
LVRM1_0184_D03.b.ab1 : AGTTCTGGATGATAAGGGATCAGGAGCAAAGGAACTACGAAGAACCTGCTCCAAGCACCT
LVRM1_0122_H12.b.ab1 : AGTTCTGGATGAAAAGGGATCANGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
LVR01_0053_A10.b.ab1 : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
LVRM1_0166_C07.b.ab1 : AGTTCTGGATGAAAAGGGATCACGAGCAGAGGAACTACGATAAACCTGCTCCAAGCACCT
TCH01_0078_C01.b.ab1 : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TCH01_0007_H12.b.ab1 : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TES01_0075_G12.b.ab1 : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TES01_0103_F09.b.ab1 : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TES01_0043_E11.b.ab1 : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TCH01_0069_E08.b.ab1 : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
20050322C-001377 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
---------+---------+---------+---------+---------+---------+ 659
LVRM1_0184_D03.b.ab1 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCGCAGCAAAGT
LVRM1_0122_H12.b.ab1 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
LVR01_0053_A10.b.ab1 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
LVRM1_0166_C07.b.ab1 : GTCTGTGCTCCAGCTGGACATCAGCAACTCGCAGCAAATAAGAGATGCTCACAGCAGAAT
TCH01_0078_C01.b.ab1 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TCH01_0007_H12.b.ab1 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TES01_0075_G12.b.ab1 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TES01_0103_F09.b.ab1 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TES01_0043_E11.b.ab1 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TCH01_0069_E08.b.ab1 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
20050322C-001377 : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
---------+---------+---------+---------+---------+---------+ 718
LVRM1_0184_D03.b.ab1 : GATGGAAAAGGTGCAGAACAGAGGACTGTGAGCTGTGG*TCAACACGC*AAGGATTCTTG
LVRM1_0122_H12.b.ab1 : GATGGAAAAGGTGCAGAACAAAGGACTGTGGGCTGTGGGTCACAACAC*AAGGATCCTTG
LVR01_0053_A10.b.ab1 : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
LVRM1_0166_C07.b.ab1 : GATGGAAAACGTGCATAACAGACGACTGTGGGCTGTGGTGAAAAACGGGAGGGATCCATG
TCH01_0078_C01.b.ab1 : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TCH01_0007_H12.b.ab1 : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TES01_0075_G12.b.ab1 : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TES01_0103_F09.b.ab1 : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TES01_0043_E11.b.ab1 : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TCH01_0069_E08.b.ab1 : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
20050322C-001377 : *GCTTCCCAATC*GATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGT
---------+---------+---------+---------+---------+---------+ 776
LVRM1_0184_D03.b.ab1 : *GCTTCCCAtcgatggn
LVRM1_0122_H12.b.ab1 : *GCTTCCAA*TC*GATGGGGAGCTCAT
LVR01_0053_A10.b.ab1 : *GCTTCCCAATC*GATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGT
LVRM1_0166_C07.b.ab1 : AGCTTCCCAATCCGATGGGGtagctccctcccgtgacgaacataagaacaatgcttgagc
TCH01_0078_C01.b.ab1 : *GCTTCCCAATC*GATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGT
TCH01_0007_H12.b.ab1 : *GCTTCCCAATC*GATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGT
TES01_0075_G12.b.ab1 : *GCTTCC*AATC*GATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGGCGT
TES01_0103_F09.b.ab1 : *GCTTCCCAATC*GATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGCCCGT
TES01_0043_E11.b.ab1 : *GCTTCCCAATC*GATGGGGAGCTCATTCCTATGACCCAATACAAACGATGCATGGCCGT
TCH01_0069_E08.b.ab1 : *GCTTCCCAATC*GATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGT
20050322C-001377 : GAACTTCTTCGGGGCCGTGG*AAGTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCA
---------+---------+---------+---------+---------+---------+ 835
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 : GAACTTCTTCGGGGCCGTGG*AAGTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCA
LVRM1_0166_C07.b.ab1 : gacagaaatgcatcgaggacagatggagaccagacagggaagtttgtgacacatgcctaa
TCH01_0078_C01.b.ab1 : GAACTTCTTCGGGGCCGTGG*AAGTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCA
TCH01_0007_H12.b.ab1 : GAACTTCTTCGGGGCCGTGG*AAGTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCA
TES01_0075_G12.b.ab1 : GAACTTCTTCGGGGCCGTGG*AAGTCACCAAGGCATTTTTGCCTTCTCTTAAGAAAATCC
TES01_0103_F09.b.ab1 : GAACTTCTTCNGGGCCGTGGAAAGTCAACA*GGCATTTTTGCCTCCTCTTAGGAAATCCA
TES01_0043_E11.b.ab1 : GAACTTCTTCGGGGCCGTGG*AAGTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCA
TCH01_0069_E08.b.ab1 : GAACTTCTTCGGGGCCGTGG*AAGTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCA
20050322C-001377 : AGGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGGCGG
---------+---------+---------+---------+---------+---------+ 895
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 : AGGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAAAAGATGGCGG
LVRM1_0166_C07.b.ab1 : agaacacctaagggccaggctcagtcgaacatcaacaaatcaaagtctagaaaagtattc
TCH01_0078_C01.b.ab1 : AGGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGGCGG
TCH01_0007_H12.b.ab1 : AGGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGGCGG
TES01_0075_G12.b.ab1 : AGGGCAGGCTGGTGAACATCAGCCGCTTGCCAAGAAGGGTTCAATTGGAAAAAATGGCGG
TES01_0103_F09.b.ab1 : AGGGCAGGCTGGTGAACATCAGCAGCATGCCAGGAGGGGTTCCAATGGAGAAGATGGCNG
TES01_0043_E11.b.ab1 : AGGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGGCGG
TCH01_0069_E08.b.ab1 : AGGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGGCGG
20050322C-001377 : CCTACAGCTCAACCAAGGCAGCTCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CTA
---------+---------+---------+---------+---------+---------+ 954
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 : CCTACAGCTCAACCAAGGCAGCTCTGAACCTGTTTTCGGCAGTCATGAGAAAAGAG*CTA
LVRM1_0166_C07.b.ab1 : gccatagagagcg
TCH01_0078_C01.b.ab1 : CCTACAGCTCAACCAAGGCAGCTCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CTA
TCH01_0007_H12.b.ab1 : CCTACAGCTCAACCAAGGCAGCTCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CTA
TES01_0075_G12.b.ab1 : CCTTACGCTCAAACAAGGCAGCTCTGACCATGTTTTCGGCAGTCCTGAAAAAAaaacctt
TES01_0103_F09.b.ab1 : CCTACAGCTCAACCAAAGCAACTCTGAACATGTTTTCGGCCGTCATGAGAAAAGAGCCTA
TES01_0043_E11.b.ab1 : CCTACAGCTCAACCAAGGCAGCTCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CTA
TCH01_0069_E08.b.ab1 : CCTACAGCTCAACCAAGGCAGCTCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CTA
20050322C-001377 : TCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTCCAAACAAACATCGC
---------+---------+---------+---------+---------+---------+ 1013
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 : TCCAAATGGGGAAATTAAATTCTCTGTCATCCAACCTGGAAACTTCCAAAacaaccttcc
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 : TCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTCCAAC*AAACATCGC
TCH01_0007_H12.b.ab1 : TCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTCCAAA*CAACATCGC
TES01_0075_G12.b.ab1 : tcaaatgggggagttaaagtcctcggccttccacccggaagctttccaaaaaaattcccc
TES01_0103_F09.b.ab1 : TCAAAATGGGGAATTTAAAGTCCCTGTCCTCCAACCTGGAAaccttccaaaacaacttcg
TES01_0043_E11.b.ab1 : TCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTCCAAACAAACATCGC
TCH01_0069_E08.b.ab1 : TCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTCCAAACAAACATCGC
20050322C-001377 : AGGCACGAGTGACCTGTGGGACAAGCTGGAGAAAAACATCCTGGATGACCTCACCCCTAA
---------+---------+---------+---------+---------+---------+ 1073
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 : caggcac
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 : AAGCACGAGTGACCTGTGGGAACAGCTGAGA*AAAACATCCtggatgacctcacccctaa
TCH01_0007_H12.b.ab1 : AGGCACGAGTGACCTGTGGGAACAGCTGGAG*AAAACATCCTGGATGACCTCACCCCTAA
TES01_0075_G12.b.ab1 : gggcccaaaggaacctggggaaaaacctggaaaaaaaatcccggaaaaccccccccctta
TES01_0103_F09.b.ab1 : caggcccaaatgaaccggtggaaacagctgaaaaaaaaacttcctgaatgacctcccccc
TES01_0043_E11.b.ab1 : AGGCACGAGTGACCTGTGGGACAAGCTGGAGAAAAACATCCTGGACAACCTCACCCCTAA
TCH01_0069_E08.b.ab1 : AGGCACGAGTGACCTGTGGGACAAGCTGGAGAAAAACATCCTGGATGACCTCACCCCTAA
20050322C-001377 : CCTGCAGGAGGACTACGGCCAGGACTATATCCTTAAGCAACGCAGTTTTCTCAAGTTCAT
---------+---------+---------+---------+---------+---------+ 1133
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 :
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 : ctgcaggaagactacggccagaactatttccttaacaacgcagtttctcaagtcattgac
TCH01_0007_H12.b.ab1 : C*TGCAGGAAGACTACGGCCAGGACTATATCCTTAN*CAACGCAGTTTTCTCAAGT*CAT
TES01_0075_G12.b.ab1 : cccggcgggaagaactcggcccaaaatttttcctttaacaaccccatttttccaagtttt
TES01_0103_F09.b.ab1 : caaccggcgggaagaaaccggcccagactatttccttaaccaacccatttttcccagttc
TES01_0043_E11.b.ab1 : CCTGCAGGAGGACTACGGCCAGGACTATATCCTTAAGCAACGCAGTTTTCTCAAGTTCAT
TCH01_0069_E08.b.ab1 : CCTGCAGGAGGACTACGGCCAGGACTATATCCTTAAGCAACGCAGTTTTCTCAAGTTCAT
20050322C-001377 : GAGCAACAGCTCTGAACCGGACGTCTCCCCAGTGCTCCTGGACGTCCAGCATGCCATCTC
---------+---------+---------+---------+---------+---------+ 1193
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 :
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 : acagctctgaaccggacgtcccccatggctcctggactcagcaggccatcctggcaaaag
TCH01_0007_H12.b.ab1 : GAGCAACAGCTCTGAAACGGAAGTCTCCCCAGGGTTCCTGGACGTCCAGCATGGCATCTC
TES01_0075_G12.b.ab1 : tgaaaaaaaccttttaaaaggaaacttcccccgggtcccgggaaaccccaatggcctttt
TES01_0103_F09.b.ab1 : atgaacaaaagctcttaacccggaatttccccagggccccgggaatccccaaaggccttc
TES01_0043_E11.b.ab1 : GAGCAACAGCTCTGAACCGGATATCTCCCCAGTGCTCCTGGACGTCCAGCATGCCATCTC
TCH01_0069_E08.b.ab1 : GAGCAACAGCTCTGAACCGGACGTCTCCCCAGTGCTCCTGGACGTCCAGCATGCCATCTC
20050322C-001377 : TGCTAAGAGCCCCTATGCATTTTACACGCCCGA*AAAATGTCTTTTTTGTGGCTCTGCTT
---------+---------+---------+---------+---------+---------+ 1252
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 :
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 : cccctggcttttaaagcccggaaaaatgcctttttggggcccgctttgctcctttaccct
TCH01_0007_H12.b.ab1 : TGCTAAaacccccatgcatttaaacccccggaaaaagtctttttgggggcccgctttctt
TES01_0075_G12.b.ab1 : ttttaaaaaccccctttttttttttccccccaaaaaaaattttttttggggccccctttg
TES01_0103_F09.b.ab1 : ctgctaaaaacccctttcctttttaccccccgcaaaaaaggccttttttggggccctcct
TES01_0043_E11.b.ab1 : TGCTAAGAG*CCCTATGCA*TTTACACGCCCGA*AAAATGTCTTTTTTGTGGCTCTGCTT
TCH01_0069_E08.b.ab1 : TGCTAAGAGCCCCTATGCATTTTACACGCCCGGGAAAATGTCTTTTTTGTGGCTCTGCTT
20050322C-001377 : TGCTTTCATTAGCCCTACTGT.......................................
---------+---------+---------+---------+---------+---------+ 1273
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 :
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 : acggccctattgatactttgcaaaaccccaatatttttaagggctggccaaacattt
TCH01_0007_H12.b.ab1 : cctttacccaacgtgcctttttatttttttcaaacccccaatttttttaggggatccccc
TES01_0075_G12.b.ab1 : ttttttttcccccttgggcctttttttttttttctaaaaaccctcttttttttttagggg
TES01_0103_F09.b.ab1 : tttccctttttatcccccagtgccctttttgaattcctttccaaaaactccccttttttt
TES01_0043_E11.b.ab1 : TGCctcatttagccctactgtcccatttgattacttagcaaaaactcccatagtttttca
TCH01_0069_E08.b.ab1 : TGCTTTCATTAGCCCTACTGTcctatttgattactttagcaaaagctacataattttaca
20050322C-001377 : ............................................................
---------+---------+---------+---------+---------+---------+ 1273
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 :
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 :
TCH01_0007_H12.b.ab1 : acctttacaggctactgaaaaaaaggcctttgcaaatt
TES01_0075_G12.b.ab1 : gctccccccacatttttccgggctttcgtgaaaaaaaccccctctcggaaaccctg
TES01_0103_F09.b.ab1 : ttaagagggccgccccccaaccttttacaagggttatttgaaaaataaggctctttgccc
TES01_0043_E11.b.ab1 : aggggcctgcccaaaacattgaacaaggctacctggaaaattgaggcctgtaggcaaaac
TCH01_0069_E08.b.ab1 : aggggcatgcccagaacattgagcaaggctaatggaagaatgaggcatgtaggcaatacc
20050322C-001377 : ............................................................
---------+---------+---------+---------+---------+---------+ 1273
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 :
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 :
TCH01_0007_H12.b.ab1 :
TES01_0075_G12.b.ab1 :
TES01_0103_F09.b.ab1 : aaaaccgggaaaatttctctttttgaaagaaaaggaaatcccccctccaccaaaaagggg
TES01_0043_E11.b.ab1 : ctgggaaatgttctttgccggaagaaaggaagtccctggctcccataaaatgtgggtttt
TCH01_0069_E08.b.ab1 : tgggaaatgtctattgtggaattaaaggaattttccggctcccataaaatttgggttaac
20050322C-001377 : ............................................................
---------+---------+---------+---------+---------+---------+ 1273
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 :
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 :
TCH01_0007_H12.b.ab1 :
TES01_0075_G12.b.ab1 :
TES01_0103_F09.b.ab1 : tgtctccccaaaaaaaaaaaaaaaggcggctgt
TES01_0043_E11.b.ab1 : cctccccaaanctccacttttaaaataattataaagggcctttttctccacacctaggcg
TCH01_0069_E08.b.ab1 : ccaaaaaaaaaaaaaaaaaaaagcccatgggtccaacgtcagggccggccccctaaaata
20050322C-001377 : ............................................................
---------+---------+---------+---------+---------+---------+ 1273
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 :
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 :
TCH01_0007_H12.b.ab1 :
TES01_0075_G12.b.ab1 :
TES01_0103_F09.b.ab1 :
TES01_0043_E11.b.ab1 : gcccctaaaattctaaaaaaaaccccccctcccccaaccaaaaaaaaaaaaagaatgttg
TCH01_0069_E08.b.ab1 : ccctgggggggcaagcttaccgtaccccttttttgtaaagagtcccctaaggggcgtata
20050322C-001377 : ............................................................
---------+---------+---------+---------+---------+---------+ 1273
LVRM1_0184_D03.b.ab1 :
LVRM1_0122_H12.b.ab1 :
LVR01_0053_A10.b.ab1 :
LVRM1_0166_C07.b.ab1 :
TCH01_0078_C01.b.ab1 :
TCH01_0007_H12.b.ab1 :
TES01_0075_G12.b.ab1 :
TES01_0103_F09.b.ab1 :
TES01_0043_E11.b.ab1 : gtaactgtttgcccctaaggttaaaaaa
TCH01_0069_E08.b.ab1 : aaaaaggccgggccgcttttaacccctgagggaaaacatacttggt