[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20050322C-004300
Length:
1,114
Sequence:
[FASTA format sequence]
TGGCGCGCTG TGCGGCGCAG GGCGGCTGGC ACAAACGGCG GCGCCGGGGC CGGAGGAAAA
AGCTGGCCAT CGTGACAGTT CTCTTCCCAA GCCCCTAGGG ACATCAGAGG ATTTGGGGAC
CAGCGAGCAC CCCCAGGGCA CGAGAAAAGT TTCTGTCACC TGCCCTGCCT CATCCTGCCC
CACGCCAGGC CCAGCTGCCC TGGCCCCCGG CTGCATCAAG TGGAGGAGGA GGAGGTGGAG
GAGGGTGGCA CCATGGGCCT GGGCCGTGCC CTCCATGCCC GGGGGATGAA GACACTGCTG
CCATGGACAG CCCGTGCCAG CCGCAGCCCC TGAGTCAGGC TCTCCCTCAG TTGCCTGGTT
CCGTGTCAGA ACCGTTGGAG CCTAACCGGG CCAGGATGGG GGTGGAGAGT TACCTGCCCT
GTCCCCTGCT GTCCTCCTAC CACTGTCCAG GAGCGCCTGG TGAGGCCTCG GCGGGAAGTG
GGACCCCCAG AGCCACAGCT ACTTCCACCA CAGCCAGCCC CCTGCGGGAG GGCTTCGGTG
GGCAGGATGG CGGCGAGCTG CGGCCGCTGC AGAGTGAGGG TGCTGCGGCA CTGGTCACCA
AGGGGTGCCA GCGGCTGGCA GCCCAGGGCG CCCGGCCTGA GGCCCCCAAA CGGAAATGGG
CAGAGGGTGG TGGGGATGCC CCCGCACCCA GCAAACGGCC CTGGGCCAGG CAGGAGAACC
AGGAGGCTGA GGCCGAGGGG GAGGGCTGCA GCAGTGGCAG TGGTGAGCCC AGTGCTGGGC
TGAGGGAGGA GGTGCTGCCC GCTGCACCGG AGCGCCTGGC CCTGGACTAT ATTGTGCCCT
GCATGCGGTA CTATGGCATC TGCGTCAAGG ACAGTTTCCT GGGGGCGGCA CTAGGTGGCC
GTGTGCTGGC CGAGGTGGAG GCCCTGAAGC GGGGCGGGCG CCTGCGTGAC GGGCAGCTAG
TGAGCCAGCG GGCTATCCCG CCACGCAGCA TCCGTGGGGA CCAGATTGCC TGGGTGGAAA
GCCATGAGCC CGGCTGCCGA AGCATTGGTG CTCTTATGGC CCACGTGGAT GCTGTAATCC
GCCACTGTGC TGGGAGGCTG GGCAGCTACG TCAT
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | EGLN2 | egl nine homolog 2 (C. elegans) | 377 | e-104 | O |
|
|
| EGLN1 | egl nine homolog 1 (C. elegans) | 119 | 5e-27 | O |
|
|
| EGLN3 | egl nine homolog 3 (C. elegans) | 97.4 | 2e-20 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Egln2 | EGL nine homolog 2 (C. elegans) | 355 | 3e-98 | O |
|
|
| Egln3 | EGL nine homolog 3 (C. elegans) | 98.6 | 6e-21 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Mus musculus mRNA for EGLN2 protein | 442 | e-122 | O |
|
|
| Human CX3C chemokine precursor, mRNA, alternatively spliced, complete cds | 42.1 | 0.050 | |
|
|
| 375549 MARC 2PIG Sus scrofa cDNA 5', mRNA sequence | 40.1 | 0.20 | |
|
|
| 960996 MARC 2BOV Bos taurus cDNA 3', mRNA sequence | 40.1 | 0.20 | |
|
|
| PREDICTED: Homo sapiens similar to ribosomal protein S15 isoform (LOC388568), mRNA | 38.2 | 0.78 | |
|
|
| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 6, mRNA | 38.2 | 0.78 | |
|
|
| Homo sapiens nipsnap homolog 1 (C. elegans) (NIPSNAP1), mRNA | 38.2 | 0.78 | |
|
|
| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932441J09 product:insulin-like growth factor 2, binding protein 3, full insert sequence | 38.2 | 0.78 | |
|
|
| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732470B18 product:CDNA FLJ12851 FIS, CLONE NT2RP2003401, WEAKLY SIMILAR TO UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC 3.1.2.15) homolog [Homo sapiens], full inser ... | 38.2 | 0.78 | |
|
|
| PREDICTED: Mus musculus microtubule-actin crosslinking factor 1 (Macf1), mRNA | 38.2 | 0.78 |
|
20050322C-004300 : .....................................................TGGCGCG
---------+---------+---------+---------+---------+---------+ 7
THY01_0126_D09.b.scf : ttgtcaaaacagcggtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGGCGCG
TCH01_0042_G04.b.ab1 :
20050322C-004300 : CTGTGCGGCGCAGGGCGGCTGGCACAAACGGCGGCGCCGGGGCCGGAGGAAAAAGCTGGC
---------+---------+---------+---------+---------+---------+ 67
THY01_0126_D09.b.scf : CTGTGCGGCGCAGGGCGGCTGGCACAAACGGCGGCGCCGGGGCCGGAGGAAAAAGCTGGC
TCH01_0042_G04.b.ab1 :
20050322C-004300 : CATCGTGACAGTTCTCTTCCCAAGCCCCTAGGGACATCAGAGGATTTGGGGACCAGCGAG
---------+---------+---------+---------+---------+---------+ 127
THY01_0126_D09.b.scf : CATCGTGACAGTTCTCTTCCCAAGCCCCTAGGGACATCAGAGGATTTGGGGACCAGCGAG
TCH01_0042_G04.b.ab1 :
20050322C-004300 : CACCCCCAGGGCACGAGAAAAGTTTCTGTCACCTGCCCTGCCTCATCCTGCCCCACGCCA
---------+---------+---------+---------+---------+---------+ 187
THY01_0126_D09.b.scf : CACCCCCAGGGCACGAGAAAAGTTTCTGTCACCTGCCCTGCCTCATCCTGCCCCACGCCA
TCH01_0042_G04.b.ab1 : nnnaagcttggactatgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20050322C-004300 : GGCCCAGCTGCCCTGGCCCCCGGCTGCATCAAGTGGAGGAGGAGGAGGTGGAGGAGGGTG
---------+---------+---------+---------+---------+---------+ 247
THY01_0126_D09.b.scf : GGCCCAGCTGCCCTGGCCCCCGGCTGCATCAAGTGGAGGAGGAGGAGGTGGAGGAGGGTG
TCH01_0042_G04.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtggcgcgctgtgcggcgcagggcggctg
20050322C-004300 : GCACCATGGGCCTGGGCCGTGCCCTCCATGCCCGGGGGATGAAGACACTGCTGCCATGGA
---------+---------+---------+---------+---------+---------+ 307
THY01_0126_D09.b.scf : GCACCATGGGCCTGGGCCGTGCCCTCCATGCCCGGGGGATGAAGACACTGCTGCCATGGA
TCH01_0042_G04.b.ab1 : gcacaaacggcggcgccggggccggaggaaaaagctggccatcgtgacagttctcttccc
20050322C-004300 : CAGCCCGTGCCAGCCGCAGCCCCTGAGTCAGGCTCTCCCTCAGTTGCCTGGTTCCGTGTC
---------+---------+---------+---------+---------+---------+ 367
THY01_0126_D09.b.scf : CAGCCCGTGCCAGCCGCAGCCCCTGAGTCAGGCTCTCCCTCAGTTGCCTGGTTCCGTGTC
TCH01_0042_G04.b.ab1 : aagcccctagggacatCAGCCCCTGAGTCAGGCTCTCCCTCAGTTGCCTGGTTCCGTGTC
20050322C-004300 : AGAACCGTTGGAGCCTAACCGGGCCAGGATGGGGGTGGAGAGTTACCTGCCCTGTCCCCT
---------+---------+---------+---------+---------+---------+ 427
THY01_0126_D09.b.scf : AGAACCGTTGGAGCCTAACCGGGCCAGGATGGGGGTGGAGAGTTACCTGCCCTGTCCCCT
TCH01_0042_G04.b.ab1 : AGAACCGTTGGAGCCTAACCGGGCCAGGATGGGGGTGGAGAGTTACCTGCCCTGTCCCCT
20050322C-004300 : GCTGTCCTCCTACCACTGTCCAGGAGCGCCTGGTGAGGCCTCGGCGGGAAGTGGGACCCC
---------+---------+---------+---------+---------+---------+ 487
THY01_0126_D09.b.scf : GCTGTCCTCCTACCACTGTCCAGGAGCGCCTGGTGAGGCCTCGGCGGGAAGTGGGACCCC
TCH01_0042_G04.b.ab1 : GCTGTCCTCCTACCACTGTCCAGGAGCGCCTGGTGAGGCCTCGGCGGGAAGTGGGACCCC
20050322C-004300 : CAGAGCCACAGCTACTTCCACCACAGCCAGCCCCCTGCGGGAGGGCTTCGGTGGGCAGGA
---------+---------+---------+---------+---------+---------+ 547
THY01_0126_D09.b.scf : CAGAGCCACAGCTACTTCCACCACAGCCACCCCCCTGCGGGAAGGCTTCGGTGGGCAGGA
TCH01_0042_G04.b.ab1 : CAGAGCCACAGCTACTTCCACCACAGCCAGCCCCCTGCGGGAGGGCTTCGGTGGGCAGGA
20050322C-004300 : TGGCGGCGAGCTGCGGCCGCTGCAGAGTGAGGGTGCTGCGGCACTGGTCACCAAGGGGTG
---------+---------+---------+---------+---------+---------+ 607
THY01_0126_D09.b.scf : TGGGGGGCAGCTGCGGCCCCTGCAaattaggttgctgcggccttgttcaccagggtgcgg
TCH01_0042_G04.b.ab1 : TGGCGGCGAGCTGCGGCCGCTGCAGAGTGAGGGTGCTGCGGCACTGGTCACCAAGGGGTG
20050322C-004300 : CCAGCGGCTGGCAGCCCAGGGCGCCCGGCCTGAGGCCCCCAAACGGAAATGGGCAGAGGG
---------+---------+---------+---------+---------+---------+ 667
THY01_0126_D09.b.scf : ccgttggcg
TCH01_0042_G04.b.ab1 : CCAGCGGCTGGCAGCCCAGGGCGCCCGGCCTGAGGCCCCCAAACGGAAATGGGCAGAGGG
20050322C-004300 : TGGTGGGGATGCCCCCGCACCCAGCAAACGGCCCTGGGCCAGGCAGGAGAACCAGGAGGC
---------+---------+---------+---------+---------+---------+ 727
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : TGGTGGGGATGCCCCCGCACCCAGCAAACGGCCCTGGGCCAGGCAGGAGAACCAGGAGGC
20050322C-004300 : TGAGGCCGAGGGGGAGGGCTGCAGCAGTGGCAGTGGTGAGCCCAGTGCTGGGCTGAGGGA
---------+---------+---------+---------+---------+---------+ 787
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : TGAGGCCGAGGGGGAGGGCTGCAGCAGTGGCAGTGGTGAGCCCAGTGCTGGGCTGAGGGA
20050322C-004300 : GGAGGTGCTGCCCGCTGCACCGGAGCGCCTGGCCCTGGACTATATTGTGCCCTGCATGCG
---------+---------+---------+---------+---------+---------+ 847
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : GGAGGTGCTGCCCGCTGCACCGGAGCGCCTGGCCCTGGACTATATTGTGCCCTGCATGCG
20050322C-004300 : GTACTATGGCATCTGCGTCAAGGACAGTTTCCTGGGGGCGGCACTAGGTGGCCGTGTGCT
---------+---------+---------+---------+---------+---------+ 907
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : GTACTATGGCATCTGCGTCAAGGACAGTTTCCTGGGGGCGGCACTAGGTGGCCGTGTGCT
20050322C-004300 : GGCCGAGGTGGAGGCCCTGAAGCGGGGCGGGCGCCTGCGTGACGGGCAGCTAGTGAGCCA
---------+---------+---------+---------+---------+---------+ 967
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : GGCCGAGGTGGAGGCCCTGAAGCGGGGCGGGCGCCTGCGTGACGGGCAGCTAGTGAGCCA
20050322C-004300 : GCGGGCTATCCCGCCACGCAGCATCCGTGGGGACCAGATTGCCTGGGTGGAAAGCCATGA
---------+---------+---------+---------+---------+---------+ 1027
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : GCGGGCTATCCCGCCACGCAGCATCCGTGGGGACCAGATTGCCTGGGTGGAAAGCCATGA
20050322C-004300 : GCCCGGCTGCCGAAGCATTGGTGCTCTTATGGCCCACGTGGATGCTGTAATCCGCCACTG
---------+---------+---------+---------+---------+---------+ 1087
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : GCCCGGCTGCCGAAGCATTGGTGCTCTTATGGCCCACGTGGATGCTGTAATCCGCCACTG
20050322C-004300 : TGCTGGGAGGCTGGGCAGCTACGTCAT.................................
---------+---------+---------+---------+---------+---------+ 1114
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : TGCTGGGAGGCTGGGCAGCTACGTCATccaagggcgcacccaagccatggtggcatgtta
20050322C-004300 : ............................................................
---------+---------+---------+---------+---------+---------+ 1114
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : cccagcaacgggctggggtacgtgagacacgttgacatccccacggcgatgggcgctgct
20050322C-004300 : ............................................................
---------+---------+---------+---------+---------+---------+ 1114
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : caccgtatctatacctgaatcaaactgggactcagggtcatggcggcctgctgcaaaatt
20050322C-004300 : ............................................................
---------+---------+---------+---------+---------+---------+ 1114
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : cccaaaggccggctggggtagcaacatcgagccatctttaacggttggtatttcttgttc
20050322C-004300 : ............................................................
---------+---------+---------+---------+---------+---------+ 1114
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : gatggcgaaccccagtagggaaacagcctttccccggtatgcctcctgtttggtttttgc
20050322C-004300 : ............................................................
---------+---------+---------+---------+---------+---------+ 1114
THY01_0126_D09.b.scf :
TCH01_0042_G04.b.ab1 : ccct
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