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[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]

Assembly Name:  20030531C-003556

Length: 996

Sequence:  [FASTA format sequence]
CTTGCGGAGC CCATAGGTGT GGCCCACTGA CGATCGGTGG GAGTCGTGCG TGGGGTTGGG
AGTTGACTCC GGGTGTACTT CTGTGTTTCT GCTCATCCTT TCCGTAGATG TCTCATATGG
AGCTGGGGTT GGACTCGGGT GACGATGACT TGCTGGGCTT CCTGTTAGAG GAAAGCGGAG
GTCTGGGGGC GGCGCGGGAC GAAGCCTTGG AGGCGCCCCT GGATTGGGAG CTACCACTTT
CCGAGGCATT GAGCGATTGG GACGTAGAGG ATTTCCTGAG CTGCCTGTCG AGTCCCCCAG
CATCGTTGAC CGATTTTAGC CACTCTGACC CCTATCTTGT CCACCATGAT CACACCTATT
CCCTGTCACA GGAGTATGTC TCCATAGATC TAGATAATGA GGATTATGAG AAGGAAGGGG
CCCAAATGAC TTCACTGCGT GTGGAGGCGC CCGCAGAGCA GGAGATTGGT GAGCTGATAC
TGACGGAGGA GGAGAAGAGG CTTTTGGAGA AGGAGGGGCT TACTCTGCCC GGGACACTTC
CTCTCACTAA GATGGAGGAA CAAGTTCTGA GACGAGTGCG AAGGAAGATT CGAAACAAAA
AGTCTGCTCA AGAGAGCCGC AGGAAGAAGA AGGTGTATGT GGGGAGTTTA GAGAGCAGGG
TCCTGAAATA CTCGGCCCAG AATCTGGAGC TACAGAACAA AGTACAGCTC CTGGAGGAGC
AGAATCTGTC CCTTTTGGAT CAGTTGAGGA GGCTGCAGTC CATGGTGATT CAGACGGCAA
ACAAAGCCAG CAGCAGCAGC ACCTGCATCT TGGTCCTGCT CTTCTCCTTC TGTCTCCTCT
TCGTACCTGC CATGTACTCC TCGGACACAA GGGGGAGCCC GCCAGCCGAG CATGGAGTGT
TGTCCCGCCA GCTTCGTGCC CTCCCCAGCG AGGACGTTTC CCAGCGGGAC CTGCCTGCAC
TGCAGTCAGA GGTACCACAG GACAGCTCAA CCCACG


Assembly Overview:      TOP


BLAST on RefSeq (Human):      TOP
LocusDefinitionScoreE valueFL
Nucleotide ProteinCREB3cAMP responsive element binding protein 3; luman; cyclic AMP response element (CRE)-binding protein/activating transcription factor 1; basic leucine zipper protein; transcription factor LZIP-alpha2992e-81O
Nucleotide ProteinCREB3L4androgen-induced basic leucine zipper1001e-21
Nucleotide ProteinCREB3L3CREB/ATF family transcription factor86.33e-17
Nucleotide ProteinCREB3L1OASIS protein; BBF-2 (drosophila) homolog68.67e-12


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Nucleotide ProteinCreb3cAMP responsive element binding protein 3 2353e-62O
Nucleotide ProteinCreb3l4androgen-induced basic leucine zipper 95.54e-20
Nucleotide ProteinCreb3l3cDNA sequence BC010786; similar to CREB/ATF family transcription factor 86.32e-17
Nucleotide ProteinCreb3l2RIKEN cDNA C530025K05 gene 724e-13
Nucleotide ProteinCreb3l1old astrocyte specifically induced substance; BBF-2 (drosophila) homolog 69.72e-12


BLAST on UniGene:      TOP
DefinitionScoreE valueFL
UniGene GenBank376399 MARC 2PIG Sus scrofa cDNA 5', mRNA sequence9710.0
UniGene GenBankBos taurus cAMP responsive element binding protein 3 (luman) (CREB3), mRNA8940.0O
UniGene GenBankHomo sapiens cAMP responsive element binding protein 3 (luman) (CREB3), mRNA567e-160O
UniGene GenBankMus musculus cAMP responsive element binding protein 3 (Creb3), mRNA2938e-78O
UniGene GenBank304008 MARC 1PIG Sus scrofa cDNA 5', mRNA sequence1722e-41
UniGene GenBankH3105D08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3105D08 3'.42.10.048
UniGene GenBankHomo sapiens similar to endothelial cell-selective adhesion molecule (ESAM), mRNA40.10.19
UniGene GenBankAU045786 Mouse sixteen-cell-embryo cDNA Mus musculus cDNA clone J0941D05 3'.40.10.19
UniGene GenBankMus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230072E10 product:hypothetical protein, full insert sequence.40.10.19
UniGene GenBankUI-H-BI4-aov-a-03-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3086093 3', mRNA sequence38.20.76


Assembly Members: 7      TOP
LibraryPlateLoc.Read NameAccession
LVR010101H09LVR01_0101_H09.b.ab1BP447906
LVR010102B03LVR01_0102_B03.b.ab1BP442087
OVRM10007E11OVRM1_0007_E11.b.ab1BP150924
OVRM10100C08OVRM1_0100_C08.b.ab1BP148176
OVRM10110G06OVRM1_0110_G06.b.ab1BP152968
OVRM10158D08OVRM1_0158_D08.b.ab1BP458067
UTR010016G11UTR01_0016_G11.b.ab1BP173018

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
196C110.400ONCCG/P
G120.600CGG/R


Alignment:      TOP

20030531C-003556     : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRM1_0158_D08.b.ab1 : cagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0110_G06.b.ab1 : ccgttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0016_G11.b.ab1 : ggggggccctatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0007_E11.b.ab1 :
LVR01_0101_H09.b.ab1 : caggcattggtgxxxxxxxxxxxxx
LVR01_0102_B03.b.ab1 : ccctagggtgxxxxxxxxxxxx
OVRM1_0100_C08.b.ab1 :
20030531C-003556 : .........CTTGCGGAGCCCATAGGTGTGGCCCACTGACGATCGGTGGGAGTCGTGCGT
---------+---------+---------+---------+---------+---------+ 51
OVRM1_0158_D08.b.ab1 : xxxxxxxxxCTTGCGGAGCCCATAGGTGTGGCCCACTGACGATCGGTGGGAGTCGTGCGT
OVRM1_0110_G06.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxAGGTGTGGCCCACTGACGATCGGTGGGAGTCGTGCGT
UTR01_0016_G11.b.ab1 : xxxxxxxxxxxxxxxxxxxxxatAGGTGTGGCCCACTGACGATCGGTGGGAGTCGTGCGT
OVRM1_0007_E11.b.ab1 : agtgtgtcgaacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0101_H09.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0102_B03.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0100_C08.b.ab1 :
20030531C-003556 : GGGGTTGGGAGTTGACTCCGGGTGTACTTCTGTGTTTCTGCTCATCCTTTCCGTAGATGT
---------+---------+---------+---------+---------+---------+ 111
OVRM1_0158_D08.b.ab1 : GGGGTTGGGAGTTGACTCCGGGTGTACTTCTGTGTTTCTGCTCATCCTTTCCGTAGATGT
OVRM1_0110_G06.b.ab1 : GGGGTTGGGAGTTGACTCCGGGTGTACTTCTGTGTTTCTGCTCATCCTTTCCGTAGATGT
UTR01_0016_G11.b.ab1 : GGGGTTGGGAGTTGACTCCGGGTGTACTTCTGTGTTTCTGCTCATCCTTTCCGTAGATGT
OVRM1_0007_E11.b.ab1 : xxxxxxxxxgccacctccggcatccaggaggaaaaccccgcttgcggagcccaTAGATGT
LVR01_0101_H09.b.ab1 : xxxttgtgagccacctccggcatccaggaggaaaaccccgcttgcggagcccaTAGATGT
LVR01_0102_B03.b.ab1 : xxxttgtgagccacctccggcatccaggaggaaaaccccgcttgcggagcccaTAGATGT
OVRM1_0100_C08.b.ab1 : ccgttgtcxxxxxxxxxxxxxxxxxxxxxxx
20030531C-003556 : CTCATATGGAGCTGGGGTTGGACTCGGGTGACGATGACTTGCTGGGCTTCCTGTTAGAGG
---------+---------+---------+---------+---------+---------+ 171
OVRM1_0158_D08.b.ab1 : CTCATATGGAGCTGGGGTTGGACTCGGGTGACGATGACTTGCTGGGCTTCCTGTTAGAGG
OVRM1_0110_G06.b.ab1 : CTCATATGGAGCTGGGGTTGGACTCGGGTGACGATGACTTGCTGGGCTTCCTGTTAGAGG
UTR01_0016_G11.b.ab1 : CTCATATGGAGCTGGGGTTGGACTCGGGTGACGATGACTTGCTGGGCTTCCTGTTAGAGG
OVRM1_0007_E11.b.ab1 : CTCATATGGAGCTGGGGTTGGACTCGGGTGACGATGACTTGCTGGGCTTCCTGTTAGAGG
LVR01_0101_H09.b.ab1 : CTCATATGGAGCTGGGGTTGGACTCGGGTGACGATGACTTGCTGGGCTTCCTGTTAGAGG
LVR01_0102_B03.b.ab1 : CTCATATGGAGCTGGGGTTGGACTCGGGTGACGATGACTTGCTGGGCTTCCTGTTAGAGG
OVRM1_0100_C08.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxacttgtgtggtgttggaagtggctaagactc
20030531C-003556 : AAAGCGGAGGTCTGGGGGCGGCGCGGGACGAAGCCTTGGAGGCGCCCCTGGATTGGGAGC
---------+---------+---------+---------+---------+---------+ 231
OVRM1_0158_D08.b.ab1 : AAAGCGGAGGTCTGGGGGCGGCGCGGGACGAAGCCTTGGAGGCGCCCCTGGATTGGGAGC
OVRM1_0110_G06.b.ab1 : AAAGCGGAGGTCTGGGGGCGGCGCCGGACGAAGCCTTGGAGGCGCCCCTGGATTGGGAGC
UTR01_0016_G11.b.ab1 : AAAGCGGAGGTCTGGGGGCGGCGCCGGACGAAGCCTTGGAGGCGCCCCTGGATTGGGAGC
OVRM1_0007_E11.b.ab1 : AAAGCGGAGGTCTGGGGGCGGCGCGGGACGAAGCCTTGGAGGCGCCCCTGGATTGGGAGC
LVR01_0101_H09.b.ab1 : AAAGCGGAGGTCTGGGGGCGGCGCGGGACGAAGCCTTGGAGGCGCCCCTGGATTGGGAGC
LVR01_0102_B03.b.ab1 : AAAGCGGAGGTCTGGGGGCGGCGCGGGACGAAGCCTTGGAGGCGCCCCTGGATTGGGAGC
OVRM1_0100_C08.b.ab1 : aggctgggaggcgggtcgggtttgtgagccacctccggcatccaggaggaaaaccccgct
20030531C-003556 : TACCACTTTCCGAGGCATTGAGCGATTGGGACGTAGAGGATTTCCTGAGCTGCCTGTCGA
---------+---------+---------+---------+---------+---------+ 291
OVRM1_0158_D08.b.ab1 : TACCACTTTCCGAGGCATTGAGCGATTGGGACGTAGAGGATTTCCTGAGCTGCCTGTCGA
OVRM1_0110_G06.b.ab1 : TACCACTTTCCGAGGCATTGAGCGATTGGGACGTAGAGGATTTCCTGAGCTGCCTGTCGA
UTR01_0016_G11.b.ab1 : TACCACTTTCCGAGGCATTGAGCGATTGGGACGTAGAGGATTTCCTGAGCTGCCTGTCGA
OVRM1_0007_E11.b.ab1 : TACCACTTTCCGAGGCATTGAGCGATTGGGACGTAGAGGATTTCCTGAGCTGCCTGTCGA
LVR01_0101_H09.b.ab1 : TACCACTTTCCGAGGCATTGAGCGATTGGGACGTATAGGATTTCCTGAGCTGCCTGTCTA
LVR01_0102_B03.b.ab1 : TACCACTTTCCGAGGCATTGAGCGATTGGGACGTAGAGGATTTCCTGAGCTGCCTGTCGA
OVRM1_0100_C08.b.ab1 : tgcggagcccatAGGCATTGAGCGATTGGGACGTAGAGGATTTCCTGAGCTGCCTGTCGA
20030531C-003556 : GTCCCCCAGCATCGTTGACCGATTTTAGCCACTCTGACCCCTATCTTGTCCACCATGATC
---------+---------+---------+---------+---------+---------+ 351
OVRM1_0158_D08.b.ab1 : GTCCCCCAGCATCGTTGACCGATTTTAGCCACTCTGACCCCTATCTTGTCCACCATGATC
OVRM1_0110_G06.b.ab1 : GTCCCCCAGCATCGTTGACCGATTTTAGCCACTCTGACCCCTATCTTGTCCACCATGATC
UTR01_0016_G11.b.ab1 : GTCCCCCAGCATCGTTGACCGATTTTAGCCACTCTGACCCCTATCTTGTCCACCATGATC
OVRM1_0007_E11.b.ab1 : GTCCCCCAGCATCGTTGACCGATTTTAGCCACTCTGACCCCTATCTTGTCCACCATGATC
LVR01_0101_H09.b.ab1 : GTCCCCCAGCATCGTTGACCGATTTTAGCCACTCTGACCCCTATCTTGTCCACCATGATC
LVR01_0102_B03.b.ab1 : GTCCCCCAGCATCGTTGACCGATTTTAGCCACTCTGACCCCTATCTTGTCCACCATGATC
OVRM1_0100_C08.b.ab1 : GTCCCCCAGCATCGTTGACCGATTTTAGCCACTCTGACCCCTATCTTGTCCACCATGATC
20030531C-003556 : ACACCTATTCCCTGTCACAGGAGTATGTCTCCATAGATCTAGATAATGAGGATTATGAGA
---------+---------+---------+---------+---------+---------+ 411
OVRM1_0158_D08.b.ab1 : ACACCTATTCCCTGTCACAGGAGTATGTCTCCATAGATCTAGATAATGAGGATTATGAGA
OVRM1_0110_G06.b.ab1 : ACACCTATTCCCTGTCACAGGAGTATGTCTCCATAGATCTAGATAATGAGGATTATGAGA
UTR01_0016_G11.b.ab1 : ACACCTATTCCCTGTCACAGGAGTATGTCTCCATAGATCTAGATAATGAGGATTATGAGA
OVRM1_0007_E11.b.ab1 : ACACCTATTCCCTGTCACAGGAGTATGTCTCCATAGATCTAGATCATGAGGATTATGAGA
LVR01_0101_H09.b.ab1 : ACACCTATTCCCTGTCACAGGAGTATGTCTCCATAGATCTAGATAATGAGGATTATGAGA
LVR01_0102_B03.b.ab1 : ACACCTATTCCCTGTCACAGGAGTATGTCTCCATAGATCTAGATAATGAGGATTATGAGA
OVRM1_0100_C08.b.ab1 : ACACCTATTCCCTGTCACAGGAGTATGTCTCCATAGATCTAGATAATGAGGATTATGAGA
20030531C-003556 : AGGAAGGGGCCCAAATGACTTCACTGCGTGTGGAGGCGCCCGCAGAGCAGGAGATTGGTG
---------+---------+---------+---------+---------+---------+ 471
OVRM1_0158_D08.b.ab1 : AGGAAGGGGCCCGAATGACTTCACTGCGTGTGGAGGCGCCCGCAGAGCAGGAGATTGGTG
OVRM1_0110_G06.b.ab1 : AGGAAGGGGCCCAAATGACTTCACTGCGTGTGGAGGCGCCCGCAGAGCAGGAGATTGGTG
UTR01_0016_G11.b.ab1 : AGGAAGGGGCCCAAATGACTTCACTGCGTGTGGAGGCGCCCGCAGAGCAGGAGATTGGTG
OVRM1_0007_E11.b.ab1 : AGGAAGGGGCCCAAATGACTTCACTGCGTGCGGAGGCGCCCGCATAGCACGAGATTGGTG
LVR01_0101_H09.b.ab1 : AGGAAGGGGCCCAAATGACTTCCCTGCGTGTGGAGGCGCCCGCAGAGCACGAGATTGGTG
LVR01_0102_B03.b.ab1 : AGGAAGGGGCCCAAATGACTTCCCTGCGTGTGGAGGCGCCCGCAGAGCAGGAGATTGGTG
OVRM1_0100_C08.b.ab1 : AGGAAGGGGCCCAAATGACTTCACTGCGTGTGGAGGCGCCCGCAGAGCAGGAGATTGGTG
20030531C-003556 : AGCTGATACTGACGGAGGAGGAGAAGAGGCTTTTGGAGAAGGAGGGGCTTACTCTGCCCG
---------+---------+---------+---------+---------+---------+ 531
OVRM1_0158_D08.b.ab1 : AGCTGATACTGACGGAGGAGGAGAAGAGGCTTTTGGAGAAGGAGGGGCTTACTCTGCCCG
OVRM1_0110_G06.b.ab1 : AGCTGATACTGACGGAGGAGGAGAAGAGGCTTTTGGAGAAGGAGGGGCTTACTCTGCCCG
UTR01_0016_G11.b.ab1 : AGCTGATACTGACGGAGGAGGAGAAGAGGCTTTTGGAGAAGGAGGGGCTTACTCTGCCCG
OVRM1_0007_E11.b.ab1 : AGCTGATACTGACCGAGGATGAGAATAGGCTATTGGAGAATGAGGGGCTTACTCTGTCCG
LVR01_0101_H09.b.ab1 : AGCTGATACTGACGGAGGAGGAGAAGAGGCTTTTGGAGAAGGAGGGGCTTACTCTGCCCG
LVR01_0102_B03.b.ab1 : AGCTGATACTGACGGAGGAGGAGAAGAGGCTTTTGGAGAAGGAGGGGCTTACTCTGCCCG
OVRM1_0100_C08.b.ab1 : AGCTGATACTGACGGAGGAGGAGAAGAGGCTTTTGGAGAAGGAGGGGCTTACTCTGCCCG
20030531C-003556 : GGACACTTCCTCTCACTAAGATGGAGGAACAAGTTCTGAGACGAGTGCGAAGGAAGATTC
---------+---------+---------+---------+---------+---------+ 591
OVRM1_0158_D08.b.ab1 : GGACACTTCCTCTCACTAGGATGGAGGAACAAGTTCTGAGACGAGTGCGAAGGAAGATTC
OVRM1_0110_G06.b.ab1 : GGACACTTCCTCTCACTAAGATGGAGGAACAAGTTCTGAGACGAGTGCGAAGGAAGATTC
UTR01_0016_G11.b.ab1 : GGACACTTCCTCTCACTAAGATGGAGGAACAAGTTCTGAGACGAGTGCGAAGGAAGATTC
OVRM1_0007_E11.b.ab1 : GGACACTTCCTCTCACTAAGATGGGGGAACAAGTTTTGTGACTAGTGCTAAGGATTATTC
LVR01_0101_H09.b.ab1 : GGACACTTCCTCTCACTAAGATGGAGGAACAAGTTCTGAGACAAGTGCGAAGGAAGATTC
LVR01_0102_B03.b.ab1 : GGACACTTCCTCTCACTAAGATGGAGGAACAAGTTCTGAGACGAGTGCGAAGGAAGATTC
OVRM1_0100_C08.b.ab1 : GGACACTTCCTCTCACTAAGATGGAGGAACAAGTTCTGAGACGAGTGCGAAGGAAGATTC
20030531C-003556 : GAAACAAAAAGTCTGCTCAAGAGAGCCGCAGGAAGAAGAAGGTGTATGTGGGGAGTTTAG
---------+---------+---------+---------+---------+---------+ 651
OVRM1_0158_D08.b.ab1 : GAAACAAAAAGTCTGCTCAAGAGAGCCGCACGAAGAAGAAGGTGTATGTGG
OVRM1_0110_G06.b.ab1 : GAAACATAAAGTCTGCTNCAGAGAGCCGCAGGAAGAAGAAGGTGTATGTGGGGAGTTTAG
UTR01_0016_G11.b.ab1 : GAAACAAAAAGTCTGCTCAAGAGAGCCGCAGGAAGAAGAAGGTGTATGTGGGGAGTTTAG
OVRM1_0007_E11.b.ab1 : GTAACTAATAGTCTGATCAAGAGAGCTTGAGGAAGAATAACGTGTATGCGGGGAGATTAG
LVR01_0101_H09.b.ab1 : CAAACAAAAAGTCTGCTCAAGAGAGCCGCAGGAAGAAGAAGGTGTATGTGGGGAGTTTAG
LVR01_0102_B03.b.ab1 : GAAACAAAAAGTCTGCTCAAGAGAGCCGCAGGAAGAAGAAGGTGTATGTGGGGAGTTTAG
OVRM1_0100_C08.b.ab1 : GAAACAAAAAGTCTGCTCAAGAGAGCCGCAGGAAGAAGAAGGTGTATGTGGGGAGTTTAG
20030531C-003556 : AGAGCAGGGTCCTGAAATACTCGGCCCAGA*ATCTGGAGCTACAGAACAAAGTACAGCTC
---------+---------+---------+---------+---------+---------+ 710
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 : AGAGCAGGTTCCTGAAATACTCGGCCCAGA*ATCTGGAGCTACAGAACAAAGTACAGCTC
UTR01_0016_G11.b.ab1 : AGAGCAGGGTCCTGAAATACTCGGCCCAGA*ATCTGGAGCTACAGAACAAAGTACAGCTC
OVRM1_0007_E11.b.ab1 : AGAGCATGGTTCTGAAATACCAGGCCCAAACATTTGGTTCTTCACAACTAATTACATATT
LVR01_0101_H09.b.ab1 : AGAGCATGGTCCTGAAATACTCGGCCCAGA*ATCTGGAGCTACAGAACAAAGTACAGCTC
LVR01_0102_B03.b.ab1 : AGAGCAGGGTCCTGAAATACTCGGCCCAGA*ATCTGGAGCTACAGAACAAAGTACAGCTC
OVRM1_0100_C08.b.ab1 : AGAGCAGGGTCCTGAAATACTCGGCCCAGA*ATCTGGAGCTACAGAACAAAGTACAGCTC
20030531C-003556 : CTGGAGGAGCAGAATCTGTCCCTTTTGGATCAGTTGAGGAGGCTGCAGTCCATGGTGATT
---------+---------+---------+---------+---------+---------+ 770
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 : CTGGAGGAGCAGAATCTGTCCCTTTTGGATCAGTTGAGGAAGCTGCAGTCCATGTTGATT
UTR01_0016_G11.b.ab1 : CTGGAGGAGCAGAATCTGTCCCTTTTGGATCAGTTGAGGAGGCTGCAGTCCATGGTGATT
OVRM1_0007_E11.b.ab1 : CTGGAGGAGCAGAATCTGACCCTTTTGTATCAGacggagaggcttgagtcattgggtata
LVR01_0101_H09.b.ab1 : CTGGAGGAGCAGAATCTGTCCCTTTTGGATCAGTTGAGGAGGCTGCAGTCCATGGTGGTT
LVR01_0102_B03.b.ab1 : CTGGAGGAGCAGAATCTGTCCCTTTTGGATCAGTTGAGGAGGCTGCAGTCCATGGTGGTT
OVRM1_0100_C08.b.ab1 : CTGGAGGAGCAGAATCTGTCCCTCTTGGATCAGTTGAGGAGGCTGCAGTCCATGGTGATT
20030531C-003556 : CAGACGGCAAACAAAGCCAGCAGCAGCAGCACCTGCATCTTGGTCCTGCTCTTCTCCTTC
---------+---------+---------+---------+---------+---------+ 830
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 : CAGACTGCAAATCAAGCCAGCAACAGCAGCccc
UTR01_0016_G11.b.ab1 : CAGACGGCAAACAAAGCCAGCAGCAGCAGCACCTGCATCTTGGTCCTGCTCTTCTCCTTC
OVRM1_0007_E11.b.ab1 : cgaacggataccgagccacatcagcaactaccgcatataggtcctgctatatatcttttt
LVR01_0101_H09.b.ab1 : CAGACGGCAAACAAAGCCAGCAGCAGCAGCACCTGCATCTTGGTCCTGCTCTTCTCCTTC
LVR01_0102_B03.b.ab1 : CAGACGGCAAACAAAGCCAGCAGCAGCAGCACCTGCATCTTGGTCCTGCTCTTCTCCTTC
OVRM1_0100_C08.b.ab1 : CAGACGGCAAACAAAGCCAGCAGCAGCAGCACCTGCATCTTGGTCCTGCTCTTCTCCTTC
20030531C-003556 : TGTCTCCTCTTCGTACCTGCCATGTACTCCTCGGACACAAGGGGGAGCCCGCC*AGCCGA
---------+---------+---------+---------+---------+---------+ 889
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 :
UTR01_0016_G11.b.ab1 : TGTCTCCTCTTCGTACCTGCCATG
OVRM1_0007_E11.b.ab1 : ctactgtgagact
LVR01_0101_H09.b.ab1 : TGTCTCCTCTTCGTACCTGCCATGTACTCCTCGGACACAAGGGGGAGCCCGCCCAACTGA
LVR01_0102_B03.b.ab1 : TGTCTCCTCTTCGTACCTGCCATGTACTCCTCGGACANCAGGGGGAGCCCGCC*AGCCGA
OVRM1_0100_C08.b.ab1 : TGTCTCCTCTTCGTACCTGCCATGTACTCCTCGGACACAAGGGGGAGCCCGTC*AGCCGA
20030531C-003556 : GCATGGAGTGTTGTCCCGCCAGCTTCGTGCCCTCCCCAGCGAGGACGTTTCCCAGCGGGA
---------+---------+---------+---------+---------+---------+ 949
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 :
UTR01_0016_G11.b.ab1 :
OVRM1_0007_E11.b.ab1 :
LVR01_0101_H09.b.ab1 : GCATGGAGTGTTGTCCCGCCAGCTTcgtgccctccccaacgaggacgttcccccagcggg
LVR01_0102_B03.b.ab1 : GCATGGAGTGTTGTCCCGCCAGCTTCGTGCCCTCCCCAGCGAGGACGTTTCCCAGCGGGA
OVRM1_0100_C08.b.ab1 : GCATGCAGTGTTGTCCCGCCAGCTTCGTGCCTTCCCa
20030531C-003556 : CCTGCCTGCACTGCAGTCAGAGGTACCACAGGACAGCTCAACCCACG.............
---------+---------+---------+---------+---------+---------+ 996
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 :
UTR01_0016_G11.b.ab1 :
OVRM1_0007_E11.b.ab1 :
LVR01_0101_H09.b.ab1 : acctgcctgcactgcaatcagaggtaccacatgaacacctcaccccaacgacctccaggg
LVR01_0102_B03.b.ab1 : CCTGCCTGCACTGCAGTCAGAGGTACCACAGGACAGCTCAACCCACGagctccaagcctc
OVRM1_0100_C08.b.ab1 :
20030531C-003556 : ............................................................
---------+---------+---------+---------+---------+---------+ 996
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 :
UTR01_0016_G11.b.ab1 :
OVRM1_0007_E11.b.ab1 :
LVR01_0101_H09.b.ab1 : ctcctggcaactcttggcttccctgtttccaccaccagggttttggggcttcctgggggt
LVR01_0102_B03.b.ab1 : ctggcaacctcttgctgcctgttccaccacatgggcttgggctcctgggggcaaaatccc
OVRM1_0100_C08.b.ab1 :
20030531C-003556 : ............................................................
---------+---------+---------+---------+---------+---------+ 996
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 :
UTR01_0016_G11.b.ab1 :
OVRM1_0007_E11.b.ab1 :
LVR01_0101_H09.b.ab1 : caaaaatttccccctttgaacccttccccctttgccccaacccccctttctccaaggggt
LVR01_0102_B03.b.ab1 : cccattgaagctggcccctggccccgaccgctttctcaagggtctttccaacccccaggt
OVRM1_0100_C08.b.ab1 :
20030531C-003556 : ............................................................
---------+---------+---------+---------+---------+---------+ 996
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 :
UTR01_0016_G11.b.ab1 :
OVRM1_0007_E11.b.ab1 :
LVR01_0101_H09.b.ab1 : ccttctctaacccccaaggtttccccctttttttcccccccctgcccattgcaaaaattc
LVR01_0102_B03.b.ab1 : tccccttctttcccccctgccattgcaaaatctcccaaaaaaaaagaagggaagggaaat
OVRM1_0100_C08.b.ab1 :
20030531C-003556 : ............................................................
---------+---------+---------+---------+---------+---------+ 996
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 :
UTR01_0016_G11.b.ab1 :
OVRM1_0007_E11.b.ab1 :
LVR01_0101_H09.b.ab1 : tcctccataaaaaaaaaaaaaaggggggaaagaaaaatgggggcttcccccccccctttc
LVR01_0102_B03.b.ab1 : ggggcttcccccctcccccccccaacccccccccctttttttcctgtgttttacccccct
OVRM1_0100_C08.b.ab1 :
20030531C-003556 : ............................................................
---------+---------+---------+---------+---------+---------+ 996
OVRM1_0158_D08.b.ab1 :
OVRM1_0110_G06.b.ab1 :
UTR01_0016_G11.b.ab1 :
OVRM1_0007_E11.b.ab1 :
LVR01_0101_H09.b.ab1 : tcccccccctcccccccccc
LVR01_0102_B03.b.ab1 : ttgttcccaaggggggcggcaaggggg
OVRM1_0100_C08.b.ab1 :