[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20050322C-000850
Length:
1,000
Sequence:
[FASTA format sequence]
GAGACCTGGC AGGGATTTGG GACGCTGGAC AGGCAGTTTC TTCACGTAGC CAGAGTGCGA
ACGTGGGGTG CAAAACGGGT CCTTTGCGGC GCGGTGGGTT CGGGGCCCTG GCAGCCGTTT
TGCGGAGGTG CCACGCCCTA GGGGCTGGGC CGTGGTGGGC CCGGGGTCTA CTCCGACCAC
CTGGACCGCG AAGTGGCCTG GGAACTGGAA GGAAGATGTT CCCCGGGCGC TGTCCGCCGC
CCGCGCTACT GGGCCGAGGT CCCCATCTCA ACGTAGATTC TCTTTTTCCC CTCTTCTGCA
GGCTCGTTTC TGGCATGATG GCGCAAAGGG CCTTCCCGAA TCCTTATGCA GATTTTAACA
AATCCCTGGC CGAAGGCTAC TTTGATTCTG CTGGGAGGCT CACTCCTGAG TTCTCACAAC
GTGTGAACAA TAAGATTCGA GAGCTGCTTC AGCAAATGGA GAGAGGCCTA AAATCAGCAG
ACCCTCGCGA TGGCACTGCT TACACTGGAT GGGCAGGTAT CGCTGTGCTT TACTTACACC
TCTATGATGT GTTTGGGGAC CCTGCCTACC TGCAGATGGC ACATGGCTAT GCAAAGCAAA
GTCTGAACTG TTTGACCAAG CGTTCCATCA CCTTCCTGTG TGGTGATGCG GGCCCCCTGG
CAGTGGCTGC TGTGGTGCAT GACAAGATGA ACAATGAGAA GCAGGCAGAA GACTGTATCA
CCCGGCTAAT TCACCTAAAT AAGATTGACC CGCATGCTCC AAATGAAATG CTGTATGGAC
GAATGGGCTA CATCTATGCT CTTCTCTTTG TGAATAAGAA CTTTGGAGTA GAAAAGATTC
CTCGAAGCCA TATTCAGCAG ATTTGTGAAA CAGTCTTAAC CTCTGGAGAA AACCTAGCTA
GAAAAAAAAA CTTCCAGAAA AAACTCCCCT GATGTATGAA GGGAACAAAA AAATTATGTG
GGGGCTGCTC TGGGCCTGGC AGGAATTTAT TACTACCTGA
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | LANCL1 | LanC lantibiotic synthetase component C-like 1 (bacterial) | 392 | e-112 | O |
|
|
| LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) | 175 | 1e-46 | O |
|
|
| LANCL3 | LanC lantibiotic synthetase component C-like 3 (bacterial) | 52.4 | 5e-07 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Lancl1 | LanC (bacterial lantibiotic synthetase component C)-like 1 | 365 | e-104 | O |
|
|
| Lancl2 | LanC (bacterial lantibiotic synthetase component C)-like 2 | 186 | 4e-50 | O |
|
|
| Lancl3 | LanC lantibiotic synthetase component C-like 3 (bacterial) | 52.8 | 3e-07 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | CJ031110 full-length enriched swine cDNA library, adult testis Sus scrofa cDNA clone TES01H060016 5', mRNA sequence | 1201 | 0.0 | |
|
|
| Homo sapiens LanC lantibiotic synthetase component C-like 1 (bacterial) (LANCL1), mRNA | 769 | 0.0 | O |
|
|
| Mus musculus mRNA for LanC-like protein 1 (Lancl1 gene) | 547 | e-154 | O |
|
|
| Homo sapiens LanC lantibiotic synthetase component C-like 2 (bacterial) (LANCL2), mRNA | 44.1 | 0.011 | |
|
|
| Homo sapiens, clone IMAGE:4420333, mRNA | 40.1 | 0.18 | |
|
|
| 968750 MARC 4BOV Bos taurus cDNA 3', mRNA sequence | 40.1 | 0.18 | |
|
|
| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930048L16 product:unknown EST, full insert sequence | 38.2 | 0.70 | |
|
|
| MI-P-CP0-nvs-h-08-0-UI.s1 MI-P-CP0 Sus scrofa cDNA clone MI-P-CP0-nvs-h-08-0-UI 3', mRNA sequence | 38.2 | 0.70 | |
|
|
| 603045316F1 NIH_MGC_116 Homo sapiens cDNA clone IMAGE:5185779 5', mRNA sequence | 36.2 | 2.8 | |
|
|
| Homo sapiens SET domain, bifurcated 1 (SETDB1), mRNA | 36.2 | 2.8 |
|
20050322C-000850 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRM1_0082_H02.b.ab1 : acgttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0061_G05.b.ab1 : agttgtcxxxxxxxxxxxxxxxxxx
UTR01_0058_F08.b.ab1 : cctxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20050322C-000850 : GAGACCTGGCAGGGATTTGGGACGCTGGACAGGCAGTTTCTTCACGTAGCCAGAGTGCGA
---------+---------+---------+---------+---------+---------+ 60
OVRM1_0082_H02.b.ab1 : GAGACCTGGCAGGGATTTGGGACGCTGGACAGGCAGTTTCTTCACGTAGCCAGAGTGCGA
OVRM1_0061_G05.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTTTCTTCACGTAGCCCGAGTGCGA
UTR01_0058_F08.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTAGCCAGAGTGCGA
20050322C-000850 : ACGTGGGGTGCAAAACGG*GTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
---------+---------+---------+---------+---------+---------+ 119
OVRM1_0082_H02.b.ab1 : ACGTGGGGTGCAAAACGGAGTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
OVRM1_0061_G05.b.ab1 : ACGTGGGGTGCAAAACGG*GTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
UTR01_0058_F08.b.ab1 : ACGTGGGGTGCAAAACGG*GTCCTTTGCGGCGCGGTGGGTTCGGGGCCCTGGCAGCCGTT
20050322C-000850 : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
---------+---------+---------+---------+---------+---------+ 179
OVRM1_0082_H02.b.ab1 : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
OVRM1_0061_G05.b.ab1 : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
UTR01_0058_F08.b.ab1 : TTGCGGAGGTGCCACGCCCTAGGGGCTGGGCCGTGGTGGGCCCGGGGTCTACTCCGACCA
20050322C-000850 : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
---------+---------+---------+---------+---------+---------+ 239
OVRM1_0082_H02.b.ab1 : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
OVRM1_0061_G05.b.ab1 : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
UTR01_0058_F08.b.ab1 : CCTGGACCGCGAAGTGGCCTGGGAACTGGAAGGAAGATGTTCCCCGGGCGCTGTCCGCCG
20050322C-000850 : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
---------+---------+---------+---------+---------+---------+ 299
OVRM1_0082_H02.b.ab1 : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
OVRM1_0061_G05.b.ab1 : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
UTR01_0058_F08.b.ab1 : CCCGCGCTACTGGGCCGAGGTCCCCATCTCAACGTAGATTCTCTTTTTCCCCTCTTCTGC
20050322C-000850 : AGGCTCGTTTCTGGCATGATGGCGCAAAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
---------+---------+---------+---------+---------+---------+ 359
OVRM1_0082_H02.b.ab1 : AGGCTCGTTTCTGGCATGATGGCGCAAAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
OVRM1_0061_G05.b.ab1 : AGGCTCGTTTCTGGCATGATGGCGCANAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
UTR01_0058_F08.b.ab1 : AGGCTCGTTTCTGGCATGATGGCGCAAAGGGCCTTCCCGAATCCTTATGCAGATTTTAAC
20050322C-000850 : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
---------+---------+---------+---------+---------+---------+ 419
OVRM1_0082_H02.b.ab1 : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
OVRM1_0061_G05.b.ab1 : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
UTR01_0058_F08.b.ab1 : AAATCCCTGGCCGAAGGCTACTTTGATTCTGCTGGGAGGCTCACTCCTGAGTTCTCACAA
20050322C-000850 : CGTGTGAACAATAAGATTCGAGAGCTGCTTCAGCAAATGGAGAGAGGCCTAAAATCAGCA
---------+---------+---------+---------+---------+---------+ 479
OVRM1_0082_H02.b.ab1 : CGTGTGAACAATAAGATTCGAGAGCTGCTTCAGCAAATGGAGAGAGGCCTAAAATCAGCA
OVRM1_0061_G05.b.ab1 : CGTGTGAACAATAAGATTCGAGAGCTGCTTCAGCAAATGGAGAGAGGCCTAAAATCAGCA
UTR01_0058_F08.b.ab1 : CGCGTGAACAATAAGATTCGAGAGCTTCTTCAGCAAATGGAGAGAGGCCTAAAATCAGCA
20050322C-000850 : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
---------+---------+---------+---------+---------+---------+ 539
OVRM1_0082_H02.b.ab1 : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
OVRM1_0061_G05.b.ab1 : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
UTR01_0058_F08.b.ab1 : GACCCTCGCGATGGCACTGCTTACACTGGATGGGCAGGTATCGCTGTGCTTTACTTACAC
20050322C-000850 : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAA
---------+---------+---------+---------+---------+---------+ 599
OVRM1_0082_H02.b.ab1 : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAN
OVRM1_0061_G05.b.ab1 : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAN
UTR01_0058_F08.b.ab1 : CTCTATGATGTGTTTGGGGACCCTGCCTACCTGCAGATGGCACATGGCTATGCAAAGCAA
20050322C-000850 : AGTCTGAACTGTTTGACCAAGCGTTCCATCACCTTCCTGTGTGGTGATGCGGGCCCCCTG
---------+---------+---------+---------+---------+---------+ 659
OVRM1_0082_H02.b.ab1 : AGTCTGAACTGTTTGACCAAGCGTTCCATCACCTTCCTGTGTGGTGATGCGGGCCCCCTG
OVRM1_0061_G05.b.ab1 : AGTCTGAACTGTTTGACCAAGCGTTCCATCACCTTCCTGTGTGGTGATGCGGGCCCCCTG
UTR01_0058_F08.b.ab1 : AGTCTGAACTGTTTGACCAAGCGTTCCATCACCTTCCTGTGTGGTGATGCGGGCCCCCTG
20050322C-000850 : GCAGTGGCTGCTGTGGTGCATGACAAGATGAACAATGAGAAGCAGGCAGAAGACTGTATC
---------+---------+---------+---------+---------+---------+ 719
OVRM1_0082_H02.b.ab1 : GCAGTGGCTGCTGTGGTGCATGACAAGATGAACAATGAGAAGCCAGCAGAAGACTGTATC
OVRM1_0061_G05.b.ab1 : GCAGTGGCTGCTGTGGTGCATGACAAGATGAACAATGAGAAGCAGGCAGAAGACTGTATC
UTR01_0058_F08.b.ab1 : GCAGTGGCTGCTGTGGTGCATGACAAGATGAACAATGAGAAGCAGGCAGAAGACTGTATC
20050322C-000850 : ACCCGGCTAATTCACCTAAATAAGATTGACCCGCATGCTCCAAATGAAATGCTGTATGGA
---------+---------+---------+---------+---------+---------+ 779
OVRM1_0082_H02.b.ab1 : ACC
OVRM1_0061_G05.b.ab1 : ACCCGGCTAATTCACCTNAATNAGATTGACCCGCATGCTCCAAATGAAATGCTGTATGGA
UTR01_0058_F08.b.ab1 : ACCCGGCTAATTCACCTAAATAAGATTGACCCGCATGCTCCAAATGAAATGCTGTATGGA
20050322C-000850 : CGAATGGGCTACATCTATGCTCTTCTCTTTGTGAATAAGAACTTTGGAGTAGAAAAGATT
---------+---------+---------+---------+---------+---------+ 839
OVRM1_0082_H02.b.ab1 :
OVRM1_0061_G05.b.ab1 : CGAATGGGCTACATCTATGCTCT
UTR01_0058_F08.b.ab1 : CGAATGGGCTACATCTATGCTCTTCTCTTTGTGAATAAGAACTTTGGAGTAGAAAAGATT
20050322C-000850 : CCTCGAAGCCATATTCAGCAGATTTGTGAAACAGTCTTAACCTCTGGAGAAAACCTAGCT
---------+---------+---------+---------+---------+---------+ 899
OVRM1_0082_H02.b.ab1 :
OVRM1_0061_G05.b.ab1 :
UTR01_0058_F08.b.ab1 : CCTCGAAGCCATATTCAGCAGATTTGTGAAACAGTCTTAACCTCTGGAGAAAACCTAGCT
20050322C-000850 : AGAAAAAAAAACTTCCAGAAAAAACTCCCCTGATGTATGAAGGGAACAAAAAAATTATGT
---------+---------+---------+---------+---------+---------+ 959
OVRM1_0082_H02.b.ab1 :
OVRM1_0061_G05.b.ab1 :
UTR01_0058_F08.b.ab1 : AGAAAAAAAAACTTCCAGAAAAAACTCCCCTGATGTATGAAGGGAACAAAAAAATTATGT
20050322C-000850 : GGGGGCTGCTCTGGGCCTGGCAGGAATTTATTACTACCTGA...................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b.ab1 :
OVRM1_0061_G05.b.ab1 :
UTR01_0058_F08.b.ab1 : GGGGGCTGCTCTGGGCCTGGCAGGAATTTATTACTACCTGAatgcaccccaccctccagt
20050322C-000850 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b.ab1 :
OVRM1_0061_G05.b.ab1 :
UTR01_0058_F08.b.ab1 : tgacccttgcaaaagtacaaaatttgggtaaacccaattggtaaattatgtctgcccacc
20050322C-000850 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b.ab1 :
OVRM1_0061_G05.b.ab1 :
UTR01_0058_F08.b.ab1 : tgaaaattccctttcgggcaatttccccttccttgtgggggaaaaaaactccaaaatttt
20050322C-000850 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b.ab1 :
OVRM1_0061_G05.b.ab1 :
UTR01_0058_F08.b.ab1 : gcctattcccatttgggggcccccgggtttccccctgggggggaaaaatcctaaattgcc
20050322C-000850 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRM1_0082_H02.b.ab1 :
OVRM1_0061_G05.b.ab1 :
UTR01_0058_F08.b.ab1 : tcctttttccggggcccact
TOP
TOP