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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20060611S-002215

Length: 1,113

Sequence:  [FASTA format sequence]
NNNNNTTGAC TAACAXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
TTGTACCTGT CTTGAGAGGA TAATTTAATA TACTCTTGAA ACTCTTAAAA AAAAATTCCC
TGGAAAGTAA AAGTATCCAC TTTAAGGGAT TAGAGGTAAT TTAACTCCCT ATTTTTTTTT
TTCTGTATTG TAGAAAAATG ATTGTTTGAA TAAATGTCAC TGTTTTGTGT ACATTCGTTA
AACTGTATGA GATCAGTAAA CCACTTTCTG AGTTGTAATA GTAGCATAAA AATATGGGCT
ACGTTTGCGT GACTTTTTTT TTTTTTTTTT TTTCTGCTGC AAATCGTGGC ATATGGAGGT
TCCCAGGCTA GTGGTTGAAT TGGAGCTACA GCTGCCATTG TACACCACAG CCACAGCAGT
GTGGGATCTG AGCTACATCT GTAACCTACA CCACAGCTCA TGGCAAAGCT GGATCCTTAA
CCCACTGAGT GAGACCAGGG ATCGAACCCA CATCCTTGTG GATCCTAGTC GGGTTTGTTA
GCCACTGAAG CCCATGTAGG GAACTCCTTT TTAAAAGGTA TTGTTTATAT CTCTACCTCT
TTCTTTTCCG CCCGCTCCCC CCTCCCCCCG AGCGCCGCTC CGGCTGCACC GCGCTCGCTC
TGAGCTCCCG GTTCCTGCTA AGCTAGCGCC GCCGTCGTCT CCCTCCAGCC GCCATCATGA
TCATCTACCG GGACCTCATC AGCCATGATG AGATGTTTTC CGACATCTAC AAGATCCGGG
AGATCGCGGA CGGGCTGTGT CTGGAGGTGG AGGGGAAGAT GGTCAGTAGG ACAGAGGGTA
ACATTGATGA CTCGCTCATT GGTGGAAATG CCTCCGCTGA AAGGCCCGAG GGCGAAGGTA
CCGAAAGCAC AGTAATCACT GGTGTCGATA TTGTCATGAA CCATCACCTG CAGGAAACCA
GCTTCACAAA GGAAGCCCTA CAGAAGTACA TCAAAGATTA TATGAAAAGT CATCAAGGGA
AANCTCGAGA ACAGAGACCC GAANGAGGTA AACCTTTTAT GACAGGAGCT GCAGAAACAA
TCAAGCCATC CTTGCTATTT CAAAAACTAT CAGTTCCTTA TGGTGAAAAC TGNATCCNGA
CGGCTGGTTG CCTGCTGGAC ACACCGGGAA GGGGGGACCC CTAAGAGATT CCTTAAGAGG
GCTAAAAGGA AAAAGTTACA AATTGGGGTG GGAAGAATAT ACCCGTGTTT AAAGGGGGGC
TGGTTTCTCT CAAAACCGGA TTTAAAGGGG GAGAGGGCCT TGCCCTTTTT AAAAATTTTT
TTG

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		TPT1	tumor protein, translationally-controlled 1	225	5e-59	O
		FLJ44635	TPT1-like protein	191	1e-48	O
		FKSG2	apoptosis inhibitor	168	9e-42	O
		LOC647673	similar to Translationally-controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) (Fortilin)	150	2e-36	O
		LOC389787	similar to Translationally-controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) (Fortilin)	150	2e-36	O
		LOC643870	similar to Translationally-controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) (Fortilin)	132	7e-31	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Tpt1	tumor protein, translationally-controlled 1	219	4e-57	O
		LOC627798	similar to tumor protein, translationally-controlled 1	207	2e-53	O
		LOC627798	similar to tumor protein, translationally-controlled 1	207	2e-53	O
		LOC627798	similar to tumor protein, translationally-controlled 1	207	2e-53	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC476924	similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF)	225	5e-59	O
		LOC476924	similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF)	225	5e-59	O
		LOC476924	similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF)	225	5e-59	O
		LOC476924	similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF)	225	5e-59	O
		LOC476924	similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF)	224	2e-58	O
		LOC476924	similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF)	184	1e-46	O
		LOC476924	similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF)	158	1e-38	O
		LOC611644	similar to Neuromedin-B receptor (NMB-R) (Neuromedin-B-preferring bombesin receptor)	60.8	2e-09	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		TPT1	tumor protein, translationally-controlled 1	225	6e-59	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		TCTP	translationally controlled tumor protein	225	1e-60	O