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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20070806C-000022

Length: 1,075

Sequence [FASTA format sequence]
TCATTGCTCT ACAACTCCGA AGAGCAACAG CTGAGACCAC CTTGAGAAGA GCATGGTCCC
AGCGGCTATT ATACCCATGA ATTTGATGGC GACGAGGAAT TCTACGTGGA CCTGGGGAAG
AAGGAGACTG TCTGGCAGCT GCCTCTGTTT AGCAAATTTA GAAGTTTTGA CCCACAGGGT
GCACTGAGGA ACATAGCTAC GGCAAAACAT AATTTGAACA TCCTGATTAA ACGTTCCAAC
AACACCGCGG CTGTCAATCA GGTTCCTGAG GTGACTGTGT TTCCCAAGTC TCCAGTGATG
CTGGGTCAGC CCAACACCCT CATCTGTCAT GTGGACAACA TCTTTCCTCC TGTGATCAAC
ATCACGTGGT TGAAGAACGG GCACTCTGTC ACAGAAGGTT TTTCTGAGAC CAGCTTCCTC
TCCAAAAATG ATCATTCCTT CCTCAAGATC AGTTATCTCA CCTTCCTCCC TTCTGATGAT
GATTTTTATG ACTGCAAAGT GGAGCACTGG GGCCTGGATA AGCCACTTCT GAAACACTGG
GAACCTGAGA TTCCAGCCCC CATGTCAGAG CTGACAGAGA CAGTGGTCTG CGCCCTGGGA
TTGATCGTGG GCCTTGTGGG CATCGTGGTG GGCACTGTCT TCATCATTCA AGGCCTGCGC
TCAGGTGGTC CCTCTAGACA CCAAGGGTCC TTGTGAGTCA CACTCCAGAA GGGAAGGTGC
ACTGCCCGCC TACAAGAGCT GAAGAGTGGA TGTGCTCAAC GACCTAGAAC TATTTTCTGG
CCAAATTCAT CATATACCTT CTCTCTTCCT ACATTCTTCT TCTCACCTCT TCTCTGGAAC
TTAAGGTGCT GTGTCATCTC AGAATTCATA TGCCCTTGGA ATCCTCTTCC TGACCTTCTA
GGTTTTTTTT CTTTTCTCAG TTGTTACCTG TTATGGGATC TCTGAGATAT CCCACTCGGC
TACCTGATCC CTCAGTGACC CTAAACTAAT ATGTACATGG AAACAATAAA TCACTTCATG
AGGTTTTTGT ACTGAAAAAA AAAAAAAAAC CTGTCTTTCA TCTCAAGGCT GACTA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100507718"PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 3 [Homo sapiens]. "3349e-92
Contig/Assembly ProteinLOC100507718"PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 2 [Homo sapiens]. "3349e-92
Contig/Assembly ProteinLOC100507718"PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 1 [Homo sapiens]. "3349e-92
Contig/Assembly ProteinLOC100507718"PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 3 [Homo sapiens]. "3323e-91
Contig/Assembly ProteinLOC100507718"PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 2 [Homo sapiens]. "3323e-91
Contig/Assembly ProteinLOC100507718"PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 1 [Homo sapiens]. "3323e-91
Contig/Assembly ProteinLOC100507686"PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 3 [Homo sapiens]. "3292e-90
Contig/Assembly ProteinLOC100507686"PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 2 [Homo sapiens]. "3292e-90
Contig/Assembly ProteinLOC100507686"PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 1 [Homo sapiens]. "3292e-90
Contig/Assembly ProteinHLA-DQA2"HLA class II histocompatibility antigen, DQ alpha 2 chain precursor [Homo sapiens]. "3272e-89


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinH2-Aa"histocompatibility 2, class II antigen A, alpha precursor [Mus musculus]. "2954e-80
Contig/Assembly ProteinH2-Ea-ps"histocompatibility 2, class II antigen E alpha precursor [Mus musculus]. "2171e-56
Contig/Assembly ProteinLOC100504404"PREDICTED: h-2 class II histocompatibility antigen, E-K alpha chain-like [Mus musculus]. "2155e-56
Contig/Assembly ProteinH2-Oa"histocompatibility 2, O region alpha locus [Mus musculus]. "2101e-54
Contig/Assembly ProteinH2-DMa"class II histocompatibility antigen, M alpha chain precursor [Mus musculus]. "796e-15
Contig/Assembly ProteinH2-Ob"histocompatibility 2, O region beta locus [Mus musculus]. "70.92e-12
Contig/Assembly ProteinB2mbeta-2-microglobulin precursor [Mus musculus]. 67.42e-11O
Contig/Assembly ProteinH2-Eb1"H-2 class II histocompatibility antigen, I-E beta chain precursor [Mus musculus]. "63.92e-10
Contig/Assembly ProteinH2-Eb2"histocompatibility 2, class II antigen E beta2 [Mus musculus]. "63.53e-10
Contig/Assembly ProteinH2-Ab1"histocompatibility 2, class II antigen A, beta 1 precursor [Mus musculus]. "63.53e-10


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinHLA-DQA1"major histocompatibility complex, class II, DQ alpha [Canis lupus familiaris]. "3331e-91
Contig/Assembly ProteinDLA-DRAMHC class II DR alpha chain [Canis lupus familiaris]. 2262e-59
Contig/Assembly ProteinLOC474869"PREDICTED: similar to HLA class II histocompatibility antigen, DO alpha chain precursor (MHC class II antigen DOA) (MHC DZ alpha) (MHC DN-alpha) isoform 11 [Canis familiaris]. "2217e-58O
Contig/Assembly ProteinLOC474869"PREDICTED: similar to HLA class II histocompatibility antigen, DO alpha chain precursor (MHC class II antigen DOA) (MHC DZ alpha) (MHC DN-alpha) isoform 10 [Canis familiaris]. "79.74e-15
Contig/Assembly ProteinHLA-DQB1"major histocompatibility complex, class II, DQ beta 1 [Canis lupus familiaris]. "68.21e-11
Contig/Assembly ProteinHLA-DRB1"DLA class II histocompatibility antigen, DR-1 beta chain precursor [Canis lupus familiaris]. "67.82e-11
Contig/Assembly ProteinHLA-DMA"major histocompatibility complex, class II, DM alpha [Canis lupus familiaris]. "67.82e-11O
Contig/Assembly ProteinLOC478284PREDICTED: similar to beta-2-microglobulin precursor isoform 2 [Canis familiaris]. 65.59e-11O
Contig/Assembly ProteinLOC478284PREDICTED: similar to beta-2-microglobulin precursor isoform 3 [Canis familiaris]. 65.59e-11O
Contig/Assembly ProteinHLA-DOB"major histocompatibility complex, class II, DO beta [Canis lupus familiaris]. "60.53e-09


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinHLA-DQA1"major histocompatibility complex, class II, DQ alpha 5 [Bos taurus]. "3262e-89
Contig/Assembly ProteinBOLA-DQA1"major histocompatibility complex, class II, DQ alpha, type 1 [Bos taurus]. "3253e-89
Contig/Assembly ProteinLOC100336394PREDICTED: BOLA-DQA2 protein-like [Bos taurus]. 3225e-88
Contig/Assembly ProteinBOLA-DQA3"major histocompatibility complex, class II, DQ alpha, type 3 [Bos taurus]. "3124e-85
Contig/Assembly ProteinBOLA-DQA2"major histocompatibility complex, class II, DQ alpha 2 [Bos taurus]. "2955e-80
Contig/Assembly ProteinBOLA-DYA"major histocompatibility complex, class II, DY alpha [Bos taurus]. "2693e-72
Contig/Assembly ProteinBOLA-DRA"major histocompatibility complex, class II, DR alpha [Bos taurus]. "2287e-60
Contig/Assembly ProteinLOC525727PREDICTED: MHC class II antigen-like [Bos taurus]. 2217e-58
Contig/Assembly ProteinLOC525727PREDICTED: MHC class II antigen-like isoform 1 [Bos taurus]. 2217e-58
Contig/Assembly ProteinLOC525727PREDICTED: MHC class II antigen-like [Bos taurus]. 2095e-54


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLA-DQA1"SLA class II histocompatibility antigen, DQ haplotype D alpha chain precursor [Sus scrofa]. "391e-109
Contig/Assembly ProteinSLA-DQA"SLA class II histocompatibility antigen, DQ haplotype C alpha chain precursor [Sus scrofa]. "364e-101
Contig/Assembly ProteinLOC100157996MHC class II antigen [Sus scrofa]. 2407e-64
Contig/Assembly ProteinSLA-DRAMHC class II DR-alpha [Sus scrofa]. 2245e-59
Contig/Assembly ProteinSLA-DOA"major histocompatibility complex, class II, DO alpha [Sus scrofa]. "73.91e-13
Contig/Assembly ProteinSLA-DMASLA-DM alpha chain [Sus scrofa]. 73.91e-13
Contig/Assembly ProteinLOC100517624PREDICTED: beta-2-microglobulin-like isoform 5 [Sus scrofa]. 71.28e-13O
Contig/Assembly ProteinLOC100517624PREDICTED: beta-2-microglobulin-like isoform 4 [Sus scrofa]. 71.28e-13O
Contig/Assembly ProteinLOC100517624PREDICTED: beta-2-microglobulin-like isoform 2 [Sus scrofa]. 71.28e-13O
Contig/Assembly ProteinLOC100517624PREDICTED: beta-2-microglobulin-like isoform 1 [Sus scrofa]. 71.28e-13O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010076B10AMP01_0076_B10.bBW960454 
ITT010086H05ITT01_0086_H05.bBW983670 AK345232
LNG010063C07LNG01_0063_C07.bBP435486 
MLN010019G06MLN01_0019_G06.bCJ009096 AK233762
MLN010022F02MLN01_0022_F02.bCJ009328 
MLN010063D04MLN01_0063_D04.bCJ012599 

  

Alignment:      TOP

20070806C-000022 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
MLN01_0019_G06.b : gcctttaggnggcttggcctataacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0086_H05.b :
MLN01_0063_D04.b :
MLN01_0022_F02.b :
LNG01_0063_C07.b :
AMP01_0076_B10.b :
20070806C-000022 : ...........................TCATTGCTCTACAACTCCGAAGAGCAACAGCTG
---------+---------+---------+---------+---------+---------+ 33
MLN01_0019_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxTCATTGCTCTACAACTCCGAAGAGCAACAGCTG
ITT01_0086_H05.b :
MLN01_0063_D04.b :
MLN01_0022_F02.b :
LNG01_0063_C07.b :
AMP01_0076_B10.b :
20070806C-000022 : AGACCACCTTGAGAAGAGCATGGTCCCAGCGGCTATTATACCCATGAATTTGATGGCGAC
---------+---------+---------+---------+---------+---------+ 93
MLN01_0019_G06.b : AGACCACCTTGAGAAGAGCATGGTCCCAGCGGCTATTATACCCATGAATTTGATGGCGAC
ITT01_0086_H05.b : nnttgatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0063_D04.b :
MLN01_0022_F02.b :
LNG01_0063_C07.b :
AMP01_0076_B10.b :
20070806C-000022 : GAGGAATTCTACGTGGACCTGGGGAAGAAGGAGACTGTCTGGCAGCTGCCTCTGTTTAGC
---------+---------+---------+---------+---------+---------+ 153
MLN01_0019_G06.b : GAGGAATTCTACGTGGACCTGGGGAAGAAGGAGACTGTCTGGCAGCTGCCTCTGTTTAGC
ITT01_0086_H05.b : xxxxxxxxxxxxxxxtcattgctctacaactccgaagagcaaCAGCTGCCTCTGTTTAGC
MLN01_0063_D04.b : nnggctaggactatgac
MLN01_0022_F02.b : n
LNG01_0063_C07.b :
AMP01_0076_B10.b : aatcctttaagatatcttaxxxxx
20070806C-000022 : AAATTTAGAAGTTTTGACCCACAGGGTGCACTGAGGAACATAGCTACGGCAAAACATAAT
---------+---------+---------+---------+---------+---------+ 213
MLN01_0019_G06.b : AAATTTAGAAGTTTTGACCCACAGGGTGCACTGAGGAACATAGCTACGGCAAAACATAAT
ITT01_0086_H05.b : AAATTTAGAAGTTCTGACCCACAGGGTGCACTGAGGAACATAGCTACGGCAAAACATAAT
MLN01_0063_D04.b : agtttgtacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0022_F02.b : nnnggtaggacatgacagtttgtacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0063_C07.b : nttttcgcggcttggactatgacxxxxxxxxxxx
AMP01_0076_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20070806C-000022 : TTGAACATCCTGATTAAACGTTCCAACAACACCGCGGCTGTCAATCAGGTTCCTGAGGTG
---------+---------+---------+---------+---------+---------+ 273
MLN01_0019_G06.b : TTGAACATCCTGATTAAACGTTCCAACAACACCGCGGCTGTCAATCAGGTTCCTGAGGTG
ITT01_0086_H05.b : TTGAACATCCTGATTAAACGTTCCAACAACACCGCGGCTGTCAATCAGGTTCCTGAGGTG
MLN01_0063_D04.b : TTGAACATCCTGATTAAACGTTCCAACAACACCGCGGCTGTCAATCAGGTTCCTGAGGTG
MLN01_0022_F02.b : xxxxxxxxxxxxxxxxggtGTTCCAACAACACCGCGGCTGTCAATCAGGTTCCTGAGGTG
LNG01_0063_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAATCAGGTTCCTGAGGTG
AMP01_0076_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20070806C-000022 : ACTGTGTTTCCCAAGTCTCCAGTGATGCTGGGTCAGCCCAACACCCTCATCTGTCATGTG
---------+---------+---------+---------+---------+---------+ 333
MLN01_0019_G06.b : ACTGTGTTTCCCAAGTCTCCAGTGATGCTGGGTCAGCCCAACACCCTCATCTGTCATGTG
ITT01_0086_H05.b : ACTGTGTTTCCCAAGTCTCCAGTGATGCTGGGTCAGCCCAACACCCTCATCTGTCATGTG
MLN01_0063_D04.b : ACTGTGTTTCCCAAGTCTCCAGTGATGCTGGGTCAGCCCAACACCCTCATCTGTCATGTG
MLN01_0022_F02.b : ACTGTGTTTCCCAAGTCTCCAGTGATGCTGGGTCAGCCCAACACCCTCATCTGTCATGTG
LNG01_0063_C07.b : ACTGTGTTTCCCAAGTCTCCAGTGATGCTGGGTCAGCCCAACACCCTCATCTGTCATGTG
AMP01_0076_B10.b : xxxxxxxxxxxxxxxxxxxCAGTGATGCTGGGTCAGCCCAACACCCTCATCTGTCATGTG
20070806C-000022 : GACAACATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACTCTGTCACA
---------+---------+---------+---------+---------+---------+ 393
MLN01_0019_G06.b : GACAACATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACTCTGTCACA
ITT01_0086_H05.b : GACAACATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACTCTGTCACA
MLN01_0063_D04.b : GACAACATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACTCTGTCACA
MLN01_0022_F02.b : GACAACATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACTCTGTCACA
LNG01_0063_C07.b : GACAACATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACTCTGTCACA
AMP01_0076_B10.b : GACAACATCTTTCCTCCTGTGGTCAACATCACGTGGTTGAAGAACGGGCACTCTGTCACA
20070806C-000022 : GAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGATCAGT
---------+---------+---------+---------+---------+---------+ 453
MLN01_0019_G06.b : GAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGATCAGT
ITT01_0086_H05.b : GAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGATCAGT
MLN01_0063_D04.b : GAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGATCAGT
MLN01_0022_F02.b : GAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGATCAGT
LNG01_0063_C07.b : GAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGATCAGT
AMP01_0076_B10.b : GAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGATCAGT
20070806C-000022 : TATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACTGGGGC
---------+---------+---------+---------+---------+---------+ 513
MLN01_0019_G06.b : TATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACTGGGGC
ITT01_0086_H05.b : TATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACTGGGGC
MLN01_0063_D04.b : TATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACTGGGGC
MLN01_0022_F02.b : TATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACTGGGGC
LNG01_0063_C07.b : TATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACTGGGGC
AMP01_0076_B10.b : TATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACTGGGGC
20070806C-000022 : CTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAGAGCTG
---------+---------+---------+---------+---------+---------+ 573
MLN01_0019_G06.b : CTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAGAGCTG
ITT01_0086_H05.b : CTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAGAGCTG
MLN01_0063_D04.b : CTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAGAGCTG
MLN01_0022_F02.b : CTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAGAGCTG
LNG01_0063_C07.b : CTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAGAGCTG
AMP01_0076_B10.b : CTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAGAGCTG
20070806C-000022 : ACAGAGACAGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGGTGGGC
---------+---------+---------+---------+---------+---------+ 633
MLN01_0019_G06.b : ACAGAGACAGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGGTGGGC
ITT01_0086_H05.b : ACAGAGACAGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGGTGGGC
MLN01_0063_D04.b : ACAGAGACAGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGGTGGGC
MLN01_0022_F02.b : ACAGAGACAGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGGTGGGC
LNG01_0063_C07.b : ACAGAGACAGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGGTGGGC
AMP01_0076_B10.b : ACAGAGACAGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGGTGGGC
20070806C-000022 : ACTGTCTTCATCATTCAAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGTCCTTG
---------+---------+---------+---------+---------+---------+ 693
MLN01_0019_G06.b : ACTGTCTTCATCATTCAAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGTCCTTG
ITT01_0086_H05.b : ACTGTCTTCATCATTCAAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGTCCTTG
MLN01_0063_D04.b : ACTGTCTTCATCATTCAAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGTCCTTG
MLN01_0022_F02.b : ACTGTCTTCATCATTCAAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGTCCTTG
LNG01_0063_C07.b : ACTGTCTTCATCATTCAAGGCCTACGCTCAGGTGGTCCCTCTAGACACCAAGGGTCCTTG
AMP01_0076_B10.b : ACTGTCTTCATCATTCAAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGTCCTTG
20070806C-000022 : TGAGTCACACTCCAGAAGGGAAGGTGCACTGCCCGCCTACAAGAGCTGAAGAGTGGATGT
---------+---------+---------+---------+---------+---------+ 753
MLN01_0019_G06.b : TGAGTCACACTCCAGAAGGGAAGGTGCACTGCCCGCCTACAAGAGCTGAAGAGTGGATGT
ITT01_0086_H05.b : TGAGTCACACTCCAGAAGGGAAGGTGCACTGCCCGCCTACAAGAGCTGAAGAGTGGATGT
MLN01_0063_D04.b : TGAGTCACACTCCAGAAGGGAAGGTGCACTGCCCGCCTACAAGAGCTGAAGAGTGGATGT
MLN01_0022_F02.b : TGAGTCACACTCCAGAAGGGAAGGTGCACTGCCCGCCTACAAGAGCTGAAGAGTGGATGT
LNG01_0063_C07.b : TGAGTCACACTCCAGAAGGGAAGGTGCACTGCCCGCCTACAAGAGCTGAAGAGTGGATGT
AMP01_0076_B10.b : TGAGTCACACTCCAGAAGGGAAGGTGCACTGCCCGCCTACAAGAGCTGAAGAGTGGATGT
20070806C-000022 : GCTCAACGACCTAGAACTATTTTCTGGCCAAATTCATCATATACCTTCTCTCTTCCTACA
---------+---------+---------+---------+---------+---------+ 813
MLN01_0019_G06.b : GCTCAACGACCTAGAACTATTTTCTGGCAAAATTCATCATATACCTTCTCTCTTCCTACA
ITT01_0086_H05.b : GCTCAACGACCTAGAACTATTTTCTGGCCAAATTCATCATATACCTTCTCTCTTCCTACA
MLN01_0063_D04.b : GCTCAACGACCTAGAACTATTTTCTGGCCAAATTCATCATATACCTTCTCTCTTCCTACA
MLN01_0022_F02.b : GCTCAACGACCTAGAACTATTTTCTGGCCAAATTCATCATATACCTTCTCTCTTCCTACA
LNG01_0063_C07.b : GCTCAACGACCTAGAACTATTTTCTGGCCAAATTCATCATATACCTTCTCTCTTCCTACA
AMP01_0076_B10.b : GCTCAACGACCTAGAACTATTTTCTGGCCAAATTCATCATATACCTTCCCTCTTCCTACA
20070806C-000022 : TTCTTCTTCTCACCTCTTCTCTGGAACTTAAGGTGCTGTGTCATCTCAGAATTCATATGC
---------+---------+---------+---------+---------+---------+ 873
MLN01_0019_G06.b : TTCTTCTTCTCACCTCTTCTCTGGAACTTAAGGTGCTGTGTCATCTCAGAATTCATATGC
ITT01_0086_H05.b : TTCTTCTTCTCACCTCTTCTCTGGAACTTAAGGTGCTGTGTCATCTCAGAATTCATATGC
MLN01_0063_D04.b : TTCTTCTTCTCACCTCTTCTCTGGAACTTAAGGTGCTGTGTCATCTCAGAATTCATATGC
MLN01_0022_F02.b : TTCTTCTTCTCACCTCTTCTCTGGAACTTAAGGTGCTGTGTCATCTCAGAATTCATATGC
LNG01_0063_C07.b : TTCTTCTTCTCACCTCTTCTCTGGAACTTAAGGTGCTGTGTCATCTCAGAATTCATATGC
AMP01_0076_B10.b : TTCTTCTTCTCACCTCTTCTCTGGAACTTAAGGTGCTGTGTCATCTCAGAATTCATATGC
20070806C-000022 : CCTTGGAATCCTCTTCCTGACCTTCTAGGTTTTTTTTCTTTTCTCAGTTGTTACCTGTTA
---------+---------+---------+---------+---------+---------+ 933
MLN01_0019_G06.b : CCTTGGAATCCTCTTCCTGACCTTCTAAGTTTTTTTTCTTTTCTCAAGTGGTACCTGGTA
ITT01_0086_H05.b : CCTTGGAATCCTCTTCCTGACCTTCTNAGGTTTTTTTCTTTTCTCAGTTGTTACCTGGTA
MLN01_0063_D04.b : CCTTGGAATCCTCTTCCTGACCTTCTAGGTTTTTTTTCTTTTCTCAGTTGTTACCTGTTA
MLN01_0022_F02.b : CCTTGGAATCCTCTTCCTGACCTTCTAGGTTTTTTTTCTTTTCTCAGTTGTTACCTGTTA
LNG01_0063_C07.b : CCTTGGAATCCTCTTCCTGACCTTCTAGGTTTTTTTTCTTTTCTCAGTTGTTACCTGTTA
AMP01_0076_B10.b : CCTTGGAATCCTCTTCCTGACCTTCTAGGTTTTTTTTCTTTTCTCAGTTGTTACCTGTTA
20070806C-000022 : TGGGATCTCTGAGATATCCCACTCGGCTACCTGATCCCTCAGTGACCCTAAACTAATATG
---------+---------+---------+---------+---------+---------+ 993
MLN01_0019_G06.b : TGGGATCTCTGAGA*ATCCCACTCGGCTACCTGATCCCTCAGTGACCCTAAACTAATATG
ITT01_0086_H05.b : TGGGATCTCTGAGATATCCCACTCGGCTACCTGATCCCTCAGTGACCCTAAACTAATATG
MLN01_0063_D04.b : TGGGATCTCTGAGATATCCCACTCGGCTACCTGATCCCTCAGTGACCCTAAACTAATATG
MLN01_0022_F02.b : TGGGATCTCTGAGATATCCCACTCGGCTACCTGATCCCTCAGTGACCCTAAACTAATATG
LNG01_0063_C07.b : TGGGATCTCTGAGATATCCCACTCGGCTACCTGATCCCTCAGTGACCCTAAACTAATATG
AMP01_0076_B10.b : TGGGATCTCTGAGATATCCCACTCGGCTACCTGATCCCTCAGTGACCCTAAACTAATATG
20070806C-000022 : TACATGGAAACAATAAATCACTTCATGAGGTTTTTGTACTGAAAAAAAAAAAAAAACCTG
---------+---------+---------+---------+---------+---------+ 1053
MLN01_0019_G06.b : T*CATG*AAAACATAAATCACTTCTGAAGTTTTTTGTACTGAAAAAAAAAAAAAAAAggc
ITT01_0086_H05.b : TACATGGAAAACATAAATCACTTCATGAGGTTTTTGTACTG*******AATTCTTTCCTG
MLN01_0063_D04.b : TACATGGAAACAATAAATCACTTCATGAGGTTTTTGTACTGnnnnnaannannnnnnnnn
MLN01_0022_F02.b : TACATGGAAACAATAAATCACTTCATGAGGTTTTTGTACTGAAAAAAAAAAAAAAaaaax
LNG01_0063_C07.b : TACATGGAAACAATAAATCACTTCATGAGGTTTTTGTACTGAAAAAAAAAAAAAAAaxxx
AMP01_0076_B10.b : TACATGGAAACAATAAATCACTTCATGAGGTTTTTGTACTGTaananaaaanannaaaaa
20070806C-000022 : TCTTTCATCTCAAGGCTGACTA......................................
---------+---------+---------+---------+---------+---------+ 1075
MLN01_0019_G06.b : ccattggcctccactgcagttcccgccgctcagagttatcctcagggcccagcttagcgt
ITT01_0086_H05.b : TCTTTCATCTCAAGGCTGACTAngaccatggtctcttgcacttcaggcccattaatctca
MLN01_0063_D04.b : nnnnnnnnnnnnannnnnnnntnnnnnnannnnnaaxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0022_F02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0063_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0076_B10.b : aaaaaaaaaaaaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20070806C-000022 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
MLN01_0019_G06.b : acccgctttctgtaaagggggcccttatgggtcgtttaaacctaggcctggcgtcgttta
ITT01_0086_H05.b : tttccagggtaggcttcatgcccagtaacacggaagagcatggatgactgacaataatat
MLN01_0063_D04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0022_F02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0063_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0076_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20070806C-000022 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
MLN01_0019_G06.b : aagtccggccgggaaacgcccccttgaatcttgtagagacttactcgggggggcatttgg
ITT01_0086_H05.b : ttgccgtctaaaaaaaaaaaaaaaaggcacttgtctccagctgcagtcccgcccctccaa
MLN01_0063_D04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0022_F02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0063_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0076_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20070806C-000022 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
MLN01_0019_G06.b : gcacccccccgatattagcccggggaaaaaatttatggaagggtaaaacccccgcccgcc
ITT01_0086_H05.b : tatccctcgagggccaacttaacctaacactttttgaaaaagggtcccaagggatcgatt
MLN01_0063_D04.b : xxxxxxxxxctttggaattttggaagaacactattttcggggggaacaattggaaaaccc
MLN01_0022_F02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0063_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0076_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaagccactcaaatcaattcccccccc
20070806C-000022 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
MLN01_0019_G06.b : tgaattctccggatattaaattaccgggcgg
ITT01_0086_H05.b : aagctagcccgccgccttttaactccgacggaaacactactgggattttaagaacctact
MLN01_0063_D04.b : cctaaaattttaaccccaaggaaaaaaaaatttttaaggtaaaggttaacaaccccatac
MLN01_0022_F02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxactgcaatgctgctgcttgaagattgctta
LNG01_0063_C07.b : xxxxxxxxxxxxxxaagggtaaacaacgccaagctgctgctgaaaattgctactggttga
AMP01_0076_B10.b : ctgccccatcgaataggttgaattcttaccttcgccaatggaacctccaaagggttgata
20070806C-000022 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
MLN01_0019_G06.b :
ITT01_0086_H05.b : tcgggggacaatgcaaacccccagattaacccggaaaaaattttaggtaagggtaacacc
MLN01_0063_D04.b : cctgcccttaaaattttcttcgggttgattttaaatatttcccgggacttgtttttata
MLN01_0022_F02.b : cgagtagaattagaaaatttaaccgggacggggatcaatgtttgggttttaattcaaacc
LNG01_0063_C07.b : ttttgaaaataacccggcccgggtctatttttgggtttaattaatccaaggcttttggcc
AMP01_0076_B10.b : accaatccccgggaacccccttgcccttggaaatattcccggggaaagggggaaaaattc
20070806C-000022 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
MLN01_0019_G06.b :
ITT01_0086_H05.b : accccgcccgaaatctttgaaaataaaaaataccgcggttt
MLN01_0063_D04.b :
MLN01_0022_F02.b : caggttttaggccccactccaagggttttgaaataacccaaacattgtaagttatgttta
LNG01_0063_C07.b : cccccccatcgttggttaacccaacacatgaaggtttttttaaaacccccccccaccaaa
AMP01_0076_B10.b : ctttcccctttaaaaagggaaaccccgggtggtaaaaaaaaat
20070806C-000022 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
MLN01_0019_G06.b :
ITT01_0086_H05.b :
MLN01_0063_D04.b :
MLN01_0022_F02.b : aaacccaccccccaacgaaaaaaaaaatttttgtattttttcctagggtaaaaaaaacaa
LNG01_0063_C07.b : aaaaaatttgtattttgctagtaaagaacaataaat
AMP01_0076_B10.b :
20070806C-000022 : ............................................................
---------+---------+---------+---------+---------+---------+ 1075
MLN01_0019_G06.b :
ITT01_0086_H05.b :
MLN01_0063_D04.b :
MLN01_0022_F02.b : tcaaaaatttttcttggggacacaacaaact
LNG01_0063_C07.b :
AMP01_0076_B10.b :