[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20070806C-006900
Length:
1,016
Sequence:
[FASTA format sequence]
GGTTTTACAG CCTGCCTCTG ACACCTGCGC GACTTTCGTC TCTGCCCACT CCTGATAAAG
CGCACCAGCG AGCAGCATGG CTACCAAATG TGGGAAGTGT GGACCTGGCT ACCCTACCCC
CCTGGAGGCC ATGAAAGGTA AGTTCGAGAA GACAGATCCA GCATCCCCCG GAAGGGAAGT
AGGCAAGCCA TTGCTGGCAC GTCCTGCACC CCGACTGCCT GCCCTCTACC CTCCAGGACC
CAGGGAGGAG ATTGTCTACC TGCCCTGCAT TTACCGAAAC ACAAGCACCG AGGCCCCGGA
TTATCTGGCC ACTGTGGATG TTGACCCTAA GTCTCCCCAG TATTGCCAGG TCATCCACCG
GCTGCCCATG CCCAACATGA AGGACGAGCT GCATCACTCA GGATGGAACA CCTGCAGCAG
CTGCTTCGGA GACAGCACCA AGTCACGCAC CAAGCTGATG CTGCCCTGCC TCATCTCCTC
CCGAATTTAT GTGGTGGACG TGGGCACCGA ACCCCGTGCC CCAAAGCTGC ACAAGGTCAT
CGAGCCCCAG GACATCCATG CCAAGTGTGA CCTGGGCTAC CTACACACCA GCCACTGCCT
GGCCAGTGGG GAGGTGATGA TCAGTGCCCT GGGAGATCCC AAGGGCAATG GCAAAGGGGG
GTTTGTGCTG CTGGATGGAG AGACCTTTGA GGTGAAGGGG ACATGGGAGA GGCCTGGAGG
TGCTGCTCCC TTGGGCTATG ACTTCTGGTA CCAGCCTCGA CACAATGTCA TGATCAGCAC
CGAATGGGCG GCTCCCAATG TCTTACGAGA TGGCTTCAAC CCCGCTGATG TACAGGCAGG
GCTGTATGGG AGCTGCTTAC ACGTGTGGGA CTGGCAGCGC CACGAGATGG TGCAAACCCT
GCATCTGCAG GATGGGCTCA TCCCCCTGGA GGTCCGATTC CTGCACCACC CGGCCGCTTC
CCCAGGGCTT CGTAGGCTGT GCCCTGGGCT CCAACATCCC ACCGCTTCTA CAAGAA
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) |
|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | SELENBP1 | selenium-binding protein 1 [Homo sapiens]. | 494 | e-140 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Selenbp2 | selenium-binding protein 2 [Mus musculus]. | 454 | e-129 | O |
|
| Selenbp1 | selenium-binding protein 1 [Mus musculus]. | 454 | e-129 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC475847 | PREDICTED: similar to selenium binding protein 1 [Canis familiaris]. | 489 | e-139 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| SELENBP1 | selenium-binding protein 1 [Bos taurus]. | 494 | e-142 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| SELENBP1 | PREDICTED: selenium-binding protein 1 [Sus scrofa]. | 539 | e-155 | O |
|
20070806C-006900 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0094_D01.b : tggxxxxxxxxxxxxxxxxxxxx
OVRM1_0182_F10.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ADR01_0039_H05.b : nnggtgaaacaxxxxxxxxxxxxxxxxxx
LVR01_0017_F12.b : gcaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20070806C-006900 : ..................GGTTTTACAGCCTGCCTCTGACACCTGCGCGACTTTCGTCTC
---------+---------+---------+---------+---------+---------+ 42
LVRM1_0094_D01.b : xxxxxxxxxxxxxxxxxxGGTTTTACAGCCTGCCTCTGACACCTGCGCGACTTTCGTCTC
OVRM1_0182_F10.b : xxxxxxxxxxxxxxxxxxxxxxxxxCAGCCTGCCTCTGACACCTGCGCGACTTTCGTCTC
ADR01_0039_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxCAGCCTGCCTCTGACACCTGCGCGACTTTCGTCTC
LVR01_0017_F12.b : xxxxxxxxxxxxxxxxxxxxxxxxxCAGCCTGCCTCTGACACCTGCGCGACTTTCGTCTC
20070806C-006900 : TGCCCACTCCTGATAAAGCGCACCAGCGAGCAGCATGGCTACCAAATGTGGGAAGTGTGG
---------+---------+---------+---------+---------+---------+ 102
LVRM1_0094_D01.b : TGCCCACTCCTGATAAAGCGCACCAGCGAGCAGCATGGCTACCAAATGTGGGAAGTGTGG
OVRM1_0182_F10.b : TGCCCACTCCTGATAAAGCGCACCAGCGAGCAGCATGGCTACCAAATGTGGGAAGTGTGG
ADR01_0039_H05.b : TGCCCACTCCTGATAAAGCGCACCAGCGAGCAGCATGGCTACCAAATGTGGGAAGTGTGG
LVR01_0017_F12.b : TGCCCACTCCTGATAAAGCGCACCAGCGAGCAGCATGGCTACCAAATGTGGGAAGTGTGG
20070806C-006900 : ACCTGGCTACCCTACCCCCCTGGAGGCCATGAAAGGTAAGTTCGAGAAGACAGATCCAGC
---------+---------+---------+---------+---------+---------+ 162
LVRM1_0094_D01.b : ACCTGGCTACCCTACCCCCCTGGAGGCCATGAAAGGTAAGTTCGAGAAGACAGATCCAGC
OVRM1_0182_F10.b : ACCTGGCTACCCTACCCCCCTGGAGGCCATGAAAGGTAAGTTCGAGAAGACAGATCCAGC
ADR01_0039_H05.b : ACCTGGCTACCCTACCCCCCTGGAGGCCATGAAAGGTAAGTTCGAGAAGACAGATCCAGC
LVR01_0017_F12.b : ACCTGGCTACCCTACCCCCCTGGAGGCCATGAAAGGTAAGTTCGAGAAGACAGATCCAGC
20070806C-006900 : ATCCCCCGGAAGGGAAGTAGGCAAGCCATTGCTGGCACGTCCTGCACCCCGACTGCCTGC
---------+---------+---------+---------+---------+---------+ 222
LVRM1_0094_D01.b : ATCCCCCGGAAGGGAAGTAGGCAAGCCATTGCTGGCACGTCCTGCACCCCGACTGCCTGC
OVRM1_0182_F10.b : ATCCCCCGGAAGGGAAGTAGGCAAGCCATTGCTGGCACGTCCTGCACCCCGACTGCCTGC
ADR01_0039_H05.b : ATCCCCCGGAAGGGAAGTAGGTAAGCCATTGCTGGCACGTCCTGCACCCCGACTGCCTGC
LVR01_0017_F12.b : ATCCCCCGGAAGGGAAGTAGGCAAGCCATTGCTGGCACGTCCTGCACCCCGACTGCCTGC
20070806C-006900 : CCTCTACCCTCCAGGACCCAGGGAGGAGATTGTCTACCTGCCCTGCATTTACCGAAACAC
---------+---------+---------+---------+---------+---------+ 282
LVRM1_0094_D01.b : CCTCTACCCTCCAGGACCCAGGGAGGAGATTGTCTACCTGCCCTGCATTTACCGAAACAC
OVRM1_0182_F10.b : CCTCTACCCTCCAGGACCCAGGGAGGAGATTGTCTACCTGCCCTGCATTTACCGAAACAC
ADR01_0039_H05.b : CCTCTACCCTCCAGGACCCAGGGAGGAGATTGTCTACCTGCCCTGCATTTACCGAAACAC
LVR01_0017_F12.b : CCTCTACCCTCCAGGACCCAGGGAGGAGATTGTCTACCTGCCCTGCATTTACCGAAACAC
20070806C-006900 : AAGCACCGAGGCCCCGGATTATCTGGCCACTGTGGATGTTGACCCTAAGTCTCCCCAGTA
---------+---------+---------+---------+---------+---------+ 342
LVRM1_0094_D01.b : AAGCACCGAGGCCCCGGATTATCTGGCCACTGTGGATGTTGACCCTAAGTCTCCCCAGTA
OVRM1_0182_F10.b : AAGCACCGAGGCCCCGGATTATCTGGCCACTGTGGATGTTGACCCTAAGTCTCCCCAGTA
ADR01_0039_H05.b : AAGCACCGAGGCCCCGGATTATCTGGCCACTGTGGATGTTGACCCTAAGTCTCCCCAGTA
LVR01_0017_F12.b : AAGCACCGAGGCCCCGGATTATCTGGCCACTGTGGATGTTGACCCTAAGTCTCCCCAGTA
20070806C-006900 : TTGCCAGGTCATCCACCGGCTGCCCATGCCCAACATGAAGGACGAGCTGCATCACTCAGG
---------+---------+---------+---------+---------+---------+ 402
LVRM1_0094_D01.b : TTGCCAGGTCATCCACCGGCTGCCCATGCCCAACATGAAGGACGAGCTGCATCACTCAGG
OVRM1_0182_F10.b : TTGCCAGGTCATCCACCGGCTGCCCATGCCCAACATGAAGGACGAGCTGCATCACTCAGG
ADR01_0039_H05.b : TTGCCAGGTCATCCACCGGCTGCCCATGCCCAACGTGAAGGACGAGCTGCATCACTCAGG
LVR01_0017_F12.b : TTGCCAGGTCATCCACCGGCTGCCCATGCCCAACGTGAAGGACGAGCTGCATCACTCAGG
20070806C-006900 : ATGGAACACCTGCAGCAGCTGCTTCGGAGACAGCACCAAGTCACGCACCAAGCTGATGCT
---------+---------+---------+---------+---------+---------+ 462
LVRM1_0094_D01.b : ATGGAACACCTGCAGCAGCTGCTTCGGAGACAGCACCAAGTCACGCACCAAGCTGATGCT
OVRM1_0182_F10.b : ATGGAACACCTGCAGCAGCTGCTTCGGAGACAGCACCAAGTCACGCACCAAGCTGATGCT
ADR01_0039_H05.b : ATGGAACACCTGCAGCAGCTGCTTCGGAGACAGCACCAAGTCACGCACCAAGCTGATGCT
LVR01_0017_F12.b : ATGGAACACCTGCAGCAGCTGCTTCGGAGACAGCACCAAGTCACGCACCAAGCTGATGCT
20070806C-006900 : GCCCTGCCTCATCTCCTCCCGAATTTATGTGGTGGACGTGGGCACCGAACCCCGTGCCCC
---------+---------+---------+---------+---------+---------+ 522
LVRM1_0094_D01.b : GCCCTGCCTCATCTCCTCCCGAATTTATGTGGTGGACGTGGGCACCGAACCCCGTGCCCC
OVRM1_0182_F10.b : GCCCTGCCTCATCTCCTCCCGAATTTATGTGGTGGACGTGGGCACCGAACCCCGTGCCCC
ADR01_0039_H05.b : GCCCTGCCTCATCTCCTCCCGAATTTATGTGGTGGACGTGGGCACCGAACCCCGTGCCCC
LVR01_0017_F12.b : GCCCTGCCTCATCTCCTCCCGAATTTATGTGGTGGACGTGGGCACCGAACCCCGTGCCCC
20070806C-006900 : AAAGCTGCACAAGGTCATCGAGCCCCAGGACATCCATGCCAAGTGTGACCTGGGCTACCT
---------+---------+---------+---------+---------+---------+ 582
LVRM1_0094_D01.b : AAAGCTGCACAAGGTCATCGAGCCCCAGGACATCCATGCCAAGTGTGACCTGGGCTACCT
OVRM1_0182_F10.b : AAAGCTGCACAAGGTCATCGAGCCCCAGGACATCCATGCCAAGTGTGACCTGNGCTACCT
ADR01_0039_H05.b : AAAGCTGCACAAGGTCATCGAGCCCCAGGACATCCATGCCAAGTGTGACCTGNGCTACCT
LVR01_0017_F12.b : AAAGCTGCACAAGGTCATCGAGCCCCAGGACATCCATGCCAAGTGTGACCTGGGCTACCT
20070806C-006900 : ACACACCAGCCACTGCCTGGCCAGTGGGGAGGTGATGATCAGTGCCCTGG*GAGATCCCA
---------+---------+---------+---------+---------+---------+ 641
LVRM1_0094_D01.b : ACACACCAGCCACTGCCTGGCCAGTGGGGAGGTGATGATCAGTGCCCTGG*GAGATCCCA
OVRM1_0182_F10.b : ACACACCAGCCACTGCCTGGCCAGTGNGGAGGTGATGATCAGTGCCCTGG*GAGATCCCA
ADR01_0039_H05.b : ACACACCAGCCACTGCCTGGCCAGTGGGGAGGTGATGATCAGTGCCCTGGNGAGATCC*A
LVR01_0017_F12.b : ACACACCAGCCACTGCCTGGCCAGTGGGGAGGTGATGATCAGTGCCCTGG*GAGATCCCA
20070806C-006900 : AGGGCAATGGCAAAGGGGGGTTTGTGCTGCTGGATGGAGAGACCTTTGAGGTGAAGGGGA
---------+---------+---------+---------+---------+---------+ 701
LVRM1_0094_D01.b : AGGGCAATGGGCAAGGtaccggccggcactgtaggcacatctgtgagggaagtagatccc
OVRM1_0182_F10.b : AGGGCAATGGNCAAGGGGGGTTTGTGCTGCTGGATGGAGAGACCTTTGAGGTGAAGGGGA
ADR01_0039_H05.b : AGGGCAATGGCAAAGGGGGGTTTGTGCTGCTGGATGGANAGA*CTTTGANGTGAANGGGA
LVR01_0017_F12.b : AGGGCAATGGCAAAGGGGGGTTTGTGCTGCTGGATGGAGAGACCTTTGAGGTGAAGGGGA
20070806C-006900 : CATGGGAGAGGCCTGGAGGTGCTGCTCCCTTGGGCTATGACTTCTGGTACCAGCCTCGAC
---------+---------+---------+---------+---------+---------+ 761
LVRM1_0094_D01.b : aagctggggaagggatggaatgacctnacagac
OVRM1_0182_F10.b : CATGGGAGAGGCCTGGAGGTGCTGCTCCCTTGGGCTATGACTTCTGGTACCA
ADR01_0039_H05.b : CATGGGAGAAGCCTGGAAGTGCTGCTCCCTTGGGCTATGACTTCTGGTACCACCCTCGAC
LVR01_0017_F12.b : CATGGGAGAGGCCTGGAGGTGCTGCTCCCTTGGGCTATGACTTCTGGTACCAGCCTCGAC
20070806C-006900 : ACAATGTCATGATCAGCACCGAATGGGCGGCTCCCAATGTCTTACGAGATGGCTTCAACC
---------+---------+---------+---------+---------+---------+ 821
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : ACAATGTCATGATCAGCACCGAATGGGCGGCTCCCAATGTCTTACGAAATGGCTTCTACC
LVR01_0017_F12.b : ACAATGTCATGATCAGCACCGAATGGGCGGCTCCCAATGTCTTACGAGATGGCTTCAACC
20070806C-006900 : CCGCTGATGTACAGGCAGGGCTGTATGGGAGCTGCTTACACGTGTGGGACTGGCAGCGCC
---------+---------+---------+---------+---------+---------+ 881
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : CC*CTGAAGTTCAGGCAGGGCTGTTATGGACCTGCTTA*ACGTGTGGGCACTGCAACCGC
LVR01_0017_F12.b : CCGCTGATGTACAGGCAGGGCTGTATGGGAGCTGCTTACACGTGTGGGACTGGCAGCGCC
20070806C-006900 : ACGAGATGGTGCAAACCCTGCATCTGCAGGATGGGCTCATCCCCCTGGAGGTCCGATTCC
---------+---------+---------+---------+---------+---------+ 941
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : CCAAAATG*TGCAAACCCTGCATCTGCAGGAGGGCCTC*TCCCCCTGGaaatccaatcct
LVR01_0017_F12.b : ACGAGATGGTGCAGACCCTGCATCTGCAGGATGGGCTCATCCCCCTGGAGGTCCGATTCC
20070806C-006900 : TGCACCACCCGGCCGCTTCCCCAGGGCTTCGTAGGCTGTGCCCTGGGCTCCAACATCCCA
---------+---------+---------+---------+---------+---------+ 1001
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : ggaagacccggcgcttcccagggtttctaggctgggcctgggttccaaatcaaggcttta
LVR01_0017_F12.b : TGCACCACCCGGCCGCTTCCCCAGGGCTTCGTAGGCTGTGCCCTGGGCTCCAACATCCCA
20070806C-006900 : CCGCTTCTACAAGAA.............................................
---------+---------+---------+---------+---------+---------+ 1016
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : aaaattgaaggaagtactgctcggaaaaaggggatccagtgcccccaaaaagtgagggct
LVR01_0017_F12.b : CCGCTTCTACAAGAAatgagggtggcatgtggctctggcccctcttccttctcaccagtc
20070806C-006900 : ............................................................
---------+---------+---------+---------+---------+---------+ 1016
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : ggagctgctgaatgccagcctctcctgaaatctgggtcctgggaaacgtttcttaattaa
LVR01_0017_F12.b : cctggttatgcctcttgctacaaggaacccccc
20070806C-006900 : ............................................................
---------+---------+---------+---------+---------+---------+ 1016
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : aatgtttgccgggaattgcacttaaattcccaaccaaaagccccttcagaaaaccttctt
LVR01_0017_F12.b :
20070806C-006900 : ............................................................
---------+---------+---------+---------+---------+---------+ 1016
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : ggggcatatgtaggggcccccgcaaggtgtaaaaaaaataatcctcaaacctgtggttgg
LVR01_0017_F12.b :
20070806C-006900 : ............................................................
---------+---------+---------+---------+---------+---------+ 1016
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : gaaaaaatggagcctcaataccctcccggggaggcctttttcctcgttggggggaaaatt
LVR01_0017_F12.b :
20070806C-006900 : ............................................................
---------+---------+---------+---------+---------+---------+ 1016
LVRM1_0094_D01.b :
OVRM1_0182_F10.b :
ADR01_0039_H05.b : tttccttcggggggtgtgttaagtaaaaaagggtattattcttggttgga
LVR01_0017_F12.b :
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