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[Overview] [RefSeq] [Assembly & SNP] 

Assembly Name:  20070806S-002214

Length: 1,113

Sequence:  [FASTA format sequence]
NNNNNTTGAC TAACAXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
TTGTACCTGT CTTGAGAGGA TAATTTAATA TACTCTTGAA ACTCTTAAAA AAAAATTCCC
TGGAAAGTAA AAGTATCCAC TTTAAGGGAT TAGAGGTAAT TTAACTCCCT ATTTTTTTTT
TTCTGTATTG TAGAAAAATG ATTGTTTGAA TAAATGTCAC TGTTTTGTGT ACATTCGTTA
AACTGTATGA GATCAGTAAA CCACTTTCTG AGTTGTAATA GTAGCATAAA AATATGGGCT
ACGTTTGCGT GACTTTTTTT TTTTTTTTTT TTTCTGCTGC AAATCGTGGC ATATGGAGGT
TCCCAGGCTA GTGGTTGAAT TGGAGCTACA GCTGCCATTG TACACCACAG CCACAGCAGT
GTGGGATCTG AGCTACATCT GTAACCTACA CCACAGCTCA TGGCAAAGCT GGATCCTTAA
CCCACTGAGT GAGACCAGGG ATCGAACCCA CATCCTTGTG GATCCTAGTC GGGTTTGTTA
GCCACTGAAG CCCATGTAGG GAACTCCTTT TTAAAAGGTA TTGTTTATAT CTCTACCTCT
TTCTTTTCCG CCCGCTCCCC CCTCCCCCCG AGCGCCGCTC CGGCTGCACC GCGCTCGCTC
TGAGCTCCCG GTTCCTGCTA AGCTAGCGCC GCCGTCGTCT CCCTCCAGCC GCCATCATGA
TCATCTACCG GGACCTCATC AGCCATGATG AGATGTTTTC CGACATCTAC AAGATCCGGG
AGATCGCGGA CGGGCTGTGT CTGGAGGTGG AGGGGAAGAT GGTCAGTAGG ACAGAGGGTA
ACATTGATGA CTCGCTCATT GGTGGAAATG CCTCCGCTGA AAGGCCCGAG GGCGAAGGTA
CCGAAAGCAC AGTAATCACT GGTGTCGATA TTGTCATGAA CCATCACCTG CAGGAAACCA
GCTTCACAAA GGAAGCCCTA CAGAAGTACA TCAAAGATTA TATGAAAAGT CATCAAGGGA
AANCTCGAGA ACAGAGACCC GAANGAGGTA AACCTTTTAT GACAGGAGCT GCAGAAACAA
TCAAGCCATC CTTGCTATTT CAAAAACTAT CAGTTCCTTA TGGTGAAAAC TGNATCCNGA
CGGCTGGTTG CCTGCTGGAC ACACCGGGAA GGGGGGACCC CTAAGAGATT CCTTAAGAGG
GCTAAAAGGA AAAAGTTACA AATTGGGGTG GGAAGAATAT ACCCGTGTTT AAAGGGGGGC
TGGTTTCTCT CAAAACCGGA TTTAAAGGGG GAGAGGGCCT TGCCCTTTTT AAAAATTTTT
TTG

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		TPT1	translationally-controlled tumor protein [Homo sapiens].	225	5e-59	O
		FLJ44635	TPT1-like protein [Homo sapiens].	192	4e-49	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Tpt1	translationally-controlled tumor protein [Mus musculus].	219	3e-57	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC476924	PREDICTED: similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) isoform 7 [Canis familiaris].	225	5e-59	O
		LOC476924	PREDICTED: similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) isoform 6 [Canis familiaris].	225	5e-59	O
		LOC476924	PREDICTED: similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) isoform 4 [Canis familiaris].	225	5e-59	O
		LOC476924	PREDICTED: similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) isoform 1 [Canis familiaris].	225	5e-59	O
		LOC476924	PREDICTED: similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) isoform 3 [Canis familiaris].	224	2e-58	O
		LOC476924	PREDICTED: similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) isoform 2 [Canis familiaris].	184	1e-46	O
		LOC476924	PREDICTED: similar to Translationally controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) isoform 5 [Canis familiaris].	158	1e-38	O
		LOC611644	PREDICTED: similar to Neuromedin-B receptor (NMB-R) (Neuromedin-B-preferring bombesin receptor) [Canis familiaris].	60.8	2e-09	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		LOC100337367	"PREDICTED: tumor protein, translationally-controlled 1-like [Bos taurus]. "	225	6e-59	O
		TPT1	translationally-controlled tumor protein [Bos taurus].	225	6e-59	O
		TPT1	"PREDICTED: tumor protein, translationally-controlled 1-like [Bos taurus]. "	219	3e-57	O
		TPT1	"PREDICTED: tumor protein, translationally-controlled 1 [Bos taurus]. "	219	3e-57	O
		LOC100297647	"PREDICTED: tumor protein, translationally-controlled 1-like [Bos taurus]. "	100	2e-21	O
		LOC100297647	"PREDICTED: tumor protein, translationally-controlled 1-like [Bos taurus]. "	100	2e-21	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		TCTP	translationally-controlled tumor protein [Sus scrofa].	225	3e-59	O