[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20070806S-056072
Length:
736
Sequence:
[FASTA format sequence]
TTGTCXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXTTG
CCTTCCATAG ACAGAACCCT TGGGCTTCTC CTCTGCTCTC TCCTCCTAAG GAAGAAAAAT
CAATATAACA AAGAAATTTT ATCCCTTCTT CATGAGCCAT AGAAAATAGT GCTGGGATTA
TTTTAATGCT AAGATGATAT GATATATGTT ACAACATATG ATGATGTACT GATGTGTATA
AGCGGACTTT AAACCTCATA GCATCCCTGC CCACTGCTGC CTGGGGTCAG TCAGTTTTGA
GACCATGACC TGGTTTCTCA CTTAGCATTC CAGATGCCCA CCCTCACGAA CTGTCACTCA
GCCTCGCCCT TGTGCCTTGT TTCAGGTGTC CACTGTGACA GCGTGTGTGC TGAGGGTCGC
TGGGGCCCCA ACTGCTCCCT GCCCTGCTAC TGTAAAAACG GGGCTTCGTG CTCCCCGGAT
GACGGCATCT GTGAGTGTGC ACCGGGGTTC CGAGGCACCA CCTGTCAGCG GAGTAAGTGT
CTCTTTAGGG GACAGCTTCC ATCTTCCCTT CTCAGATCCC CTGTTCTGCC CCTCAATTCA
CAGTTCTGTT GCCGTTGANG GCAGGGAGAG CATCATAGGT CATTCTGTTC TTGGCAGAGC
TGTCCTCCCT CCATAGCCCT GCCCCATAGG CTTCATTCTT TTCCAACTTT GGGACTCACC
TGACAGATGG GGGCATAGCC CCTTCTTCTC TGTAATGATT TTATTGCCTT CCTGGGCAGC
GCCATCGGGT TTCTCCAGTC TTGCCTTAC
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) |
|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | MEGF10 | multiple epidermal growth factor-like domains protein 10 precursor [Homo sapiens]. | 123 | 1e-28 | |
|
| MEGF11 | multiple epidermal growth factor-like domains protein 11 precursor [Homo sapiens]. | 92.8 | 3e-19 | |
|
| PEAR1 | platelet endothelial aggregation receptor 1 precursor [Homo sapiens]. | 75.5 | 5e-14 | |
|
| MEGF6 | multiple epidermal growth factor-like domains protein 6 precursor [Homo sapiens]. | 63.9 | 1e-10 | |
|
| TEK | angiopoietin-1 receptor precursor [Homo sapiens]. | 53.9 | 1e-07 | |
|
| TIE1 | tyrosine-protein kinase receptor Tie-1 precursor [Homo sapiens]. | 53.5 | 2e-07 | |
|
| SCARF1 | endothelial cells scavenger receptor isoform 5 precursor [Homo sapiens]. | 52.4 | 4e-07 | |
|
| SCARF1 | endothelial cells scavenger receptor isoform 1 precursor [Homo sapiens]. | 52.4 | 4e-07 | |
|
| LAMA5 | laminin subunit alpha-5 precursor [Homo sapiens]. | 52.4 | 4e-07 | |
|
| SCARF1 | endothelial cells scavenger receptor isoform 3 precursor [Homo sapiens]. | 52.4 | 4e-07 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Megf10 | multiple epidermal growth factor-like domains protein 10 precursor [Mus musculus]. | 123 | 1e-28 | |
|
| Megf11 | multiple epidermal growth factor-like domains protein 11 isoform 2 [Mus musculus]. | 92.8 | 2e-19 | |
|
| Megf11 | multiple epidermal growth factor-like domains protein 11 isoform 1 [Mus musculus]. | 92.8 | 2e-19 | |
|
| Pear1 | platelet endothelial aggregation receptor 1 precursor [Mus musculus]. | 70.9 | 9e-13 | |
|
| Pear1 | platelet endothelial aggregation receptor 1 precursor [Mus musculus]. | 70.9 | 9e-13 | |
|
| Pear1 | platelet endothelial aggregation receptor 1 precursor [Mus musculus]. | 70.9 | 9e-13 | |
|
| Pear1 | platelet endothelial aggregation receptor 1 precursor [Mus musculus]. | 70.9 | 9e-13 | |
|
| Megf6 | multiple epidermal growth factor-like domains protein 6 precursor [Mus musculus]. | 64.3 | 9e-11 | |
|
| Scarf1 | "scavenger receptor class F, member 1 [Mus musculus]. " | 56.2 | 2e-08 | |
|
| Tek | angiopoietin-1 receptor [Mus musculus]. | 56.2 | 2e-08 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC474665 | PREDICTED: similar to MEGF10 protein [Canis familiaris]. | 125 | 4e-29 | |
|
| LOC487609 | PREDICTED: similar to MEGF11 protein [Canis familiaris]. | 93.2 | 2e-19 | |
|
| LOC490403 | PREDICTED: similar to MEGF10 protein [Canis familiaris]. | 74.3 | 1e-13 | |
|
| LOC489619 | "PREDICTED: similar to EGF-like-domain, multiple 3 [Canis familiaris]. " | 63.9 | 1e-10 | |
|
| LOC482535 | PREDICTED: similar to tyrosine kinase with immunoglobulin-like and EGF-like domains 1 [Canis familiaris]. | 54.3 | 1e-07 | |
|
| LOC491194 | "PREDICTED: similar to scavenger receptor class F, member 1 isoform 1 precursor [Canis familiaris]. " | 53.9 | 1e-07 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| MEGF10 | PREDICTED: multiple EGF-like-domains 10 [Bos taurus]. | 125 | 4e-29 | |
|
| MEGF10 | multiple EGF-like-domains 10 [Bos taurus]. | 125 | 4e-29 | |
|
| MEGF10 | PREDICTED: multiple EGF-like-domains 10 [Bos taurus]. | 125 | 4e-29 | |
|
| LOC100336680 | PREDICTED: MEGF11 protein-like [Bos taurus]. | 95.9 | 3e-20 | |
|
| LOC100139775 | "PREDICTED: multiple EGF-like-domains 11, partial [Bos taurus]. " | 95.9 | 3e-20 | O |
|
| PEAR1 | platelet endothelial aggregation receptor 1 [Bos taurus]. | 72 | 5e-13 | |
|
| MEGF6 | PREDICTED: multiple epidermal growth factor-like domains 6-like [Bos taurus]. | 67 | 2e-11 | |
|
| MEGF11 | "PREDICTED: multiple EGF-like-domains 11, partial [Bos taurus]. " | 67 | 2e-11 | |
|
| MEGF6 | PREDICTED: multiple epidermal growth factor-like domains 6-like [Bos taurus]. | 67 | 2e-11 | |
|
| TIE1 | tyrosine-protein kinase receptor Tie-1 precursor [Bos taurus]. | 53.1 | 2e-07 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC100514939 | PREDICTED: multiple epidermal growth factor-like domains protein 11-like [Sus scrofa]. | 99.4 | 2e-21 | |
|
| LOC100515463 | "PREDICTED: multiple epidermal growth factor-like domains protein 11-like, partial [Sus scrofa]. " | 95.9 | 2e-20 | |
|
| PEAR1 | PREDICTED: platelet endothelial aggregation receptor 1-like [Sus scrofa]. | 74.3 | 5e-14 | |
|
| LOC100153543 | "PREDICTED: multiple epidermal growth factor-like domains protein 10-like, partial [Sus scrofa]. " | 62.4 | 2e-10 | |
|
| LOC100512596 | PREDICTED: n-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like [Sus scrofa]. | 60.5 | 8e-10 | |
|
| TEK | PREDICTED: angiopoietin-1 receptor [Sus scrofa]. | 51.6 | 4e-07 |
|
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