[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20080515C-003346
Length:
1,259
Sequence:
[FASTA format sequence]
GCAGACTGGT TTAAATTACC CACCAGGAAA TATGTGGCTG TAGGAGTATG CTTAATTCAT
GCTCATTGAA AGTGAGCCAG GGCTGTTTTC TCCCCCTCCC TCCTTGCCTC CCGGTTCATA
TAACCCCCGC TGCCTCCAGC CTGCCTTTGC CCACTTGACT TGCTGGCCCT GAGCACGGAG
AGGTGCAGGG AGAATCTGAG AATGGGCACG TTCTTCTCTG AGACAGGGTG GCTCTGCCTG
ACTGTCACGG CAGTGCTGGG AGCAGTAATT CTTTGCAAAC TCAAGAAGAA CCACAGGCAG
GAGGGCAGAA AGATGGTCTG CCTGGCTGGC CTCTGGGGAG GGGCTTGCCT GCTCAGCCTC
TCTCTCTTCT GGGGCTTGAT CCTCTTCTCC CTGTCATGTT TTCTCATGTA TGCTTACTTT
TCTGGCCAAG AGTTTTTACC TGTGGATCAA AAGGCGGTGC TGATCACAGG TGGCGATTCT
GGGATTGGCC ATGCTTTGTC CAAGTATCTG GATAAGCTGG GATTCACAGT ATTTGCTGGA
GTTCTGGATG AAAAGGGATC AGGAGCAGAG GAACTACGAA GAACCTGCTC CAAGCACCTG
TCTGTGCTCC AGCTGGACAT CACCAACTCG CAGCAGATAA GAGATGCTCA CAGCAAAGTG
ATGGAAAAGG TGCAGAACAG AGGACTGTGG GCTGTGGTCA ACAACGCAGG GATCCTTGGC
TTCCCAATCG ATGGGGAGCT CATTCCCATG ACCCAATACA AACGATGCAT GGCCGTGAAC
TTCTTCGGGG CCGTGGAAGT CACCAAGGCA TTTTTGCCTC TTCTTAGGAA ATCCAAGGGC
AGGCTGGTGA ACATCAGCAG CATGGCAGGA GGGGTTCCAA TGGAGAAGAT GGCGGCCTAC
AGCTCAACCA AGGCAGCTCT GACCATGTTT TCGGCAGTCA TGAGAAAAGA GCTATCCAAA
TGGGGAGTTA AAGTCTCTGT CATCCAGCCT GGAAGCTTCC AAACAAACAT CGCAGGCACG
AGTGACCTGT GGGACAAGCT GGAGAAAAAC ATCCTGGATG ACCTCACCCC TAACCTGCAG
GAGGACTACG GCCAGGACTA TATCCTTAAG CAACGCAGTT TTCTCAAGTT CATGAGCAAC
AGCTCTGAAC CGGACGTCTC CCCAGTGCTC CTGGACGTCC AGCATGCCAT CTCTGCTAAA
ACCCCTATGC ATTTTACACG CCCGGAAAAT GTCTTTTTTG TGGCTCTGCT TTGCTTCAT
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) |
|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | HSD17B2 | hydroxysteroid (17-beta) dehydrogenase 2 | 430 | e-121 | O |
|
| HSD11B2 | hydroxysteroid (11-beta) dehydrogenase 2 | 193 | 3e-49 | O |
|
| BDH1 | 3-hydroxybutyrate dehydrogenase precursor | 168 | 8e-42 | O |
|
| BDH1 | 3-hydroxybutyrate dehydrogenase precursor | 168 | 8e-42 | O |
|
| BDH1 | 3-hydroxybutyrate dehydrogenase precursor | 168 | 8e-42 | O |
|
| DHRS9 | NADP-dependent retinol dehydrogenase/reductase | 155 | 9e-38 | O |
|
| DHRS9 | NADP-dependent retinol dehydrogenase/reductase | 155 | 9e-38 | O |
|
| RDH16 | retinol dehydrogenase 16 | 154 | 2e-37 | O |
|
| SDR-O | orphan short-chain dehydrogenase / reductase | 153 | 3e-37 | O |
|
| HSD17B6 | hydroxysteroid (17-beta) dehydrogenase 6 | 147 | 1e-35 | O |
| Locus | Definition | Score | E value | FL |
|---|
| Locus | Definition | Score | E value | FL |
|---|
| Locus | Definition | Score | E value | FL |
|---|
| Locus | Definition | Score | E value | FL |
|---|
|
Assembly Members: 11
|
20080515C-003346 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0184_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0122_H12.b : nagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0053_A10.b : ggcatttggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0166_C07.b :
SKNB1_0099_A04.b :
TCH01_0078_C01.b :
TCH01_0007_H12.b :
TES01_0075_G12.b :
TES01_0103_F09.b :
TES01_0043_E11.b :
TCH01_0069_E08.b :
20080515C-003346 : .GCAGACTGGTTTAAATTACCCACCAGGAAATATGTGGCTGTAGGAGTATGCTTAATTCA
---------+---------+---------+---------+---------+---------+ 59
LVRM1_0184_D03.b : xGCAGACTGGTTTAAATTACCCACCAGGAAATATGTGGCTGTAGGAGTATGCTTAATTCA
LVRM1_0122_H12.b : xGCAGACTGGTTTAAATTACCCACCAGGAAATATGTGGCTGTAGGAGTATGCTTAATTCA
LVR01_0053_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggAGGAGTATGCTTAATTCA
LVRM1_0166_C07.b :
SKNB1_0099_A04.b :
TCH01_0078_C01.b :
TCH01_0007_H12.b :
TES01_0075_G12.b :
TES01_0103_F09.b :
TES01_0043_E11.b :
TCH01_0069_E08.b :
20080515C-003346 : TGCTCATTGAAAGTGAGCCAGGGCTGTTTTCTCCCCCTCCCTCCTTGCCTCCCGGTTCAT
---------+---------+---------+---------+---------+---------+ 119
LVRM1_0184_D03.b : TGCTCATTGAAAGTGAGCCAGGGCTGTTTTCTCCCCCTCCCTCCTTGCCTCCCGGTTCAT
LVRM1_0122_H12.b : TGCTCATTGAAAGTGAGCCAGGGCTGTTTTCTCCCCCTCCCTCCTTGCCTCCCGGTTCAT
LVR01_0053_A10.b : TGCTCATTGAAAGTGAGCCAGGGCTGTTTTCTCCCCCTCCCTCCTTGCCTCCCGGTTCAT
LVRM1_0166_C07.b : xxxxxxx
SKNB1_0099_A04.b : nnnnnaagattnn
TCH01_0078_C01.b : nnnngggctgtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0007_H12.b : nnnaagatagtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TES01_0075_G12.b :
TES01_0103_F09.b :
TES01_0043_E11.b :
TCH01_0069_E08.b :
20080515C-003346 : ATAACCCCCGCTGCCTCCAGCCTGCCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
---------+---------+---------+---------+---------+---------+ 179
LVRM1_0184_D03.b : ATAACCCCCGCTGCCTCCAGCCTGCCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
LVRM1_0122_H12.b : ATAACCCCCGCTGCCTCCAGCCTGCCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
LVR01_0053_A10.b : ATAACCCCCGCTGCCTCCAGCCTGCCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
LVRM1_0166_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxCTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
SKNB1_0099_A04.b : nnnnncctcgcgtcggcactgcttttTTTGCCC*CTTGACTTGCTGGCCCTGAGCACGGA
TCH01_0078_C01.b : xxxxxxxxxxxxxxxxxxxxxxxxctTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
TCH01_0007_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxxtTTTGCCCACTTGACTTGCTGGCCCTGAGCACGGA
TES01_0075_G12.b : nttcctgctgttgctctgcttgCCACTTGACTTGCTGGCCCTGAGCACGGA
TES01_0103_F09.b : ttncctactgttgctattgcttgCCACTTGACTTGCTGGCCCTGAGCACGGA
TES01_0043_E11.b :
TCH01_0069_E08.b :
20080515C-003346 : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
---------+---------+---------+---------+---------+---------+ 239
LVRM1_0184_D03.b : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
LVRM1_0122_H12.b : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
LVR01_0053_A10.b : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
LVRM1_0166_C07.b : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
SKNB1_0099_A04.b : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TCH01_0078_C01.b : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TCH01_0007_H12.b : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TES01_0075_G12.b : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TES01_0103_F09.b : GAGGTGCAGGGAGAATCTGAGAATGGGCACGTTCTTCTCTGAGACAGGGTGGCTCTGCCT
TES01_0043_E11.b :
TCH01_0069_E08.b :
20080515C-003346 : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
---------+---------+---------+---------+---------+---------+ 299
LVRM1_0184_D03.b : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
LVRM1_0122_H12.b : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
LVR01_0053_A10.b : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
LVRM1_0166_C07.b : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
SKNB1_0099_A04.b : GACTGTCACGGCAGTGCTGGGAGCAGTAACTCTTTGCAAACTCAAGAAGAACCACAGGCA
TCH01_0078_C01.b : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
TCH01_0007_H12.b : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
TES01_0075_G12.b : GACTGTCACAGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
TES01_0103_F09.b : GACTGTCACGGCAGTGCTGGGAGCAGTAATTCTTTGCAAACTCAAGAAGAACCACAGGCA
TES01_0043_E11.b : tggcgcactcagaataccCAGGCA
TCH01_0069_E08.b : nnn
20080515C-003346 : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
---------+---------+---------+---------+---------+---------+ 359
LVRM1_0184_D03.b : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
LVRM1_0122_H12.b : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
LVR01_0053_A10.b : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
LVRM1_0166_C07.b : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
SKNB1_0099_A04.b : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TCH01_0078_C01.b : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TCH01_0007_H12.b : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TES01_0075_G12.b : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TES01_0103_F09.b : GGAGGGCAGAAAGATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TES01_0043_E11.b : GGAGGGCAGAAA*ATGGTCTGCCTGGCTGGCCTCTGGGGAGGGGCTTGCCTGCTCAGCCT
TCH01_0069_E08.b : aagctagtactatgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20080515C-003346 : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
---------+---------+---------+---------+---------+---------+ 419
LVRM1_0184_D03.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
LVRM1_0122_H12.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
LVR01_0053_A10.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
LVRM1_0166_C07.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
SKNB1_0099_A04.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TCH01_0078_C01.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TCH01_0007_H12.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TES01_0075_G12.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TES01_0103_F09.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TES01_0043_E11.b : CTCTCTCTTCTGGGGCTTGATCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
TCH01_0069_E08.b : xxxxxxxxxxxxxxxxxxxxTCCTCTTCTCCCTGTCATGTTTTCTCATGTATGCTTACTT
20080515C-003346 : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
---------+---------+---------+---------+---------+---------+ 479
LVRM1_0184_D03.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
LVRM1_0122_H12.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
LVR01_0053_A10.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
LVRM1_0166_C07.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
SKNB1_0099_A04.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TCH01_0078_C01.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TCH01_0007_H12.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TES01_0075_G12.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TES01_0103_F09.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TES01_0043_E11.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
TCH01_0069_E08.b : TTCTGGCCAAGAGTTTTTACCTGTGGATCAAAAGGCGGTGCTGATCACAGGTGGCGATTC
20080515C-003346 : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
---------+---------+---------+---------+---------+---------+ 539
LVRM1_0184_D03.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
LVRM1_0122_H12.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
LVR01_0053_A10.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
LVRM1_0166_C07.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
SKNB1_0099_A04.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
TCH01_0078_C01.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCATAGTATTTGCTGG
TCH01_0007_H12.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
TES01_0075_G12.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
TES01_0103_F09.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCACAGTATTTGCTGG
TES01_0043_E11.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCATAGTATTTGCTGG
TCH01_0069_E08.b : TGGGATTGGCCATGCTTTGTCCAAGTATCTGGATAAGCTGGGATTCATAGTATTTGCTGG
20080515C-003346 : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
---------+---------+---------+---------+---------+---------+ 599
LVRM1_0184_D03.b : AGTTCTGGATGATAAGGGATCAGGAGCAAAGGAACTACGAAGAACCTGCTCCNAGCACCT
LVRM1_0122_H12.b : AGTTCTGGATGAAAAGGGATCANGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
LVR01_0053_A10.b : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
LVRM1_0166_C07.b : AGTTCTGGATGACAAGGGATCACGAGCAGAGGAACTACGATAAACCTGCTCCAAGCACCT
SKNB1_0099_A04.b : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGATGAACCTGCTCCAAGCACCT
TCH01_0078_C01.b : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TCH01_0007_H12.b : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TES01_0075_G12.b : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TES01_0103_F09.b : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TES01_0043_E11.b : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
TCH01_0069_E08.b : AGTTCTGGATGAAAAGGGATCAGGAGCAGAGGAACTACGAAGAACCTGCTCCAAGCACCT
20080515C-003346 : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
---------+---------+---------+---------+---------+---------+ 659
LVRM1_0184_D03.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCGCAGCAAAGT
LVRM1_0122_H12.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
LVR01_0053_A10.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
LVRM1_0166_C07.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAAATAAGAGATGCTCACAGCAGAAT
SKNB1_0099_A04.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TCH01_0078_C01.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TCH01_0007_H12.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TES01_0075_G12.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TES01_0103_F09.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TES01_0043_E11.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
TCH01_0069_E08.b : GTCTGTGCTCCAGCTGGACATCACCAACTCGCAGCAGATAAGAGATGCTCACAGCAAAGT
20080515C-003346 : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
---------+---------+---------+---------+---------+---------+ 718
LVRM1_0184_D03.b : GATGGAAAAGGTGCAGAACATAGGACTGTGAGCTGTGGTCAACAACGC*AAGGATTCTTG
LVRM1_0122_H12.b : GATGGAAAAGGTGCAGAACAAAGGACTGTGGGCTGTGGGTCACAACAC*AAGGATCCTTG
LVR01_0053_A10.b : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
LVRM1_0166_C07.b : GATGGAAAACGTGCATAACAGACGACTGTGGGCTGTGGTGAAAAACGGGAAGGATCCTTG
SKNB1_0099_A04.b : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TCH01_0078_C01.b : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TCH01_0007_H12.b : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TES01_0075_G12.b : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TES01_0103_F09.b : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TES01_0043_E11.b : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
TCH01_0069_E08.b : GATGGAAAAGGTGCAGAACAGAGGACTGTGGGCTGTGGTCAACAACGC*AGGGATCCTTG
20080515C-003346 : G*CTTCCCAATCGATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGTG
---------+---------+---------+---------+---------+---------+ 777
LVRM1_0184_D03.b : G*CTTCCCAtcaaagga
LVRM1_0122_H12.b : G*CTTCCAA*TCGATGGGGAGCTCAT
LVR01_0053_A10.b : G*CTTCCCAATCGATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGTG
LVRM1_0166_C07.b : GACTTCCCAAaccgatggggtagctccctcccgtgacgaacatagagaaaatgcatgggc
SKNB1_0099_A04.b : G*CTTCCCAATCGATGGGGAGCTCATTCCCATGACCCAATACAAGCGATGCATGGCCGTG
TCH01_0078_C01.b : G*CTTCCCAATCGATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGTG
TCH01_0007_H12.b : G*CTTCCCAATCGATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGTG
TES01_0075_G12.b : G*CTTCCCAATCGATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGTG
TES01_0103_F09.b : G*CTTCCCAATCGATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGTG
TES01_0043_E11.b : G*CTTCCCAATCGATGGGGAGCTCATTCCTATGACCCAATACAAACGATGCATGGCCGTG
TCH01_0069_E08.b : G*CTTCCCAATCGATGGGGAGCTCATTCCCATGACCCAATACAAACGATGCATGGCCGTG
20080515C-003346 : AACTTCTTCGGGGCCGTGGAA*GTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCAA
---------+---------+---------+---------+---------+---------+ 836
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b : AACTTCTTCGGGGCCGTGGAA*GTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCAA
LVRM1_0166_C07.b : gacagaaatgcatcgaggagcagaggagaccagacagggaagtttgtgacacattcctaa
SKNB1_0099_A04.b : AACTTCTTCGGGGCCGTGGAA*GTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCAA
TCH01_0078_C01.b : AACTTCTTCGGGGCCGTGGAA*GTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCAA
TCH01_0007_H12.b : AACTTCTTCGGGGCCGTGGAA*GTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCAA
TES01_0075_G12.b : AACTTCTTCGGGGC*GTGAAA*GTCACAAA*GCATTTTTGCCTTCTCTTAAGAAATCCAA
TES01_0103_F09.b : AACTTCTTCGG*GCCGTGGAAAGTCAACA*GGCATTTTTGCCTCCTCTTAGGAAATCCAA
TES01_0043_E11.b : AACTTCTTCGGGGCCGTGGAA*GTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCAA
TCH01_0069_E08.b : AACTTCTTCGGGGCCGTGGAA*GTCACCAAGGCATTTTTGCCTCTTCTTAGGAAATCCAA
20080515C-003346 : GGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGG*CGG
---------+---------+---------+---------+---------+---------+ 895
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b : GGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAAAAGATGG*CGG
LVRM1_0166_C07.b : agaacacctaagggccaggctcactcgaacatcaataaatcaaagtctagaaaagtattc
SKNB1_0099_A04.b : GGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGG*CGG
TCH01_0078_C01.b : GGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGG*CGG
TCH01_0007_H12.b : GGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGG*CGG
TES01_0075_G12.b : GGGCAGGCTGGTGAACATCCGCAGCTTGCCCAGAGGGGTTCCNATGGAAAAAATGGGCGG
TES01_0103_F09.b : GGGCAGGCTGGTGAACATCAGCAGCATGCCAGGAGGGGTTCCAATGGAGAAGATGG*CGN
TES01_0043_E11.b : GGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGG*CGG
TCH01_0069_E08.b : GGGCAGGCTGGTGAACATCAGCAGCATGGCAGGAGGGGTTCCAATGGAGAAGATGG*CGG
20080515C-003346 : CCTACAGCTCAACCAAGGCAGC*TCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CT
---------+---------+---------+---------+---------+---------+ 953
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b : CCTACAGCTCAACCAAGGCAGC*TCTGAACCTGTTTTCGGCAGTCATGAGAAAAGAG*CT
LVRM1_0166_C07.b : gccatagagagcg
SKNB1_0099_A04.b : CCTACAGCTCAACCAAGGCAGC*TCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CT
TCH01_0078_C01.b : CCTACAGCTCAACCAAGGCAGC*TCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CT
TCH01_0007_H12.b : CCTACAGCTCAACCAAGGCAGC*TCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CT
TES01_0075_G12.b : CTTAC*GCTCAACCAAGGCAGCCTCTGACCAGGTTTTCcggcgccttgaaaaaaaaactt
TES01_0103_F09.b : CCTACAGCTCAACCAAGGCAGC*TCTGAACATGTTTTCGGCCGTCATGAGAAAAGAGCCT
TES01_0043_E11.b : CCTACAGCTCAACCAAGGCAGC*TCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CT
TCH01_0069_E08.b : CCTACAGCTCAACCAAGGCAGC*TCTGACCATGTTTTCGGCAGTCATGAGAAAAGAG*CT
20080515C-003346 : ATCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTCCAAACAAACATCG
---------+---------+---------+---------+---------+---------+ 1012
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b : ATCCAAATGGGGAAATTAAAGTCTCTGTCATCCAACCTGGAAacttccaaaacaaccttc
LVRM1_0166_C07.b :
SKNB1_0099_A04.b : ATCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCT*TCAAACAAACATCC
TCH01_0078_C01.b : ATCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTTCCAACAAACATCG
TCH01_0007_H12.b : ATCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTTCAAACAAACATCG
TES01_0075_G12.b : tccaaagggggagttaagtccctggcatcccacccggaagctttccaaaaaacttcccag
TES01_0103_F09.b : ATCAAAATGGGGAATTTAAAGTCCCTGTCCTCCAACCTGGAAaccttccaaaacaacttc
TES01_0043_E11.b : ATCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTCCAAACAAACATCG
TCH01_0069_E08.b : ATCCAAATGGGGAG*TTAAAGTCTCTGTCATCCAGCCTGGAAGCTTCCAAACAAACATCG
20080515C-003346 : CAGGCACGAGTGACCTGTGGGACAAGCTGGAGAAAAACATCCTGGATGACCTCACCCCTA
---------+---------+---------+---------+---------+---------+ 1072
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b : ccaggcac
LVRM1_0166_C07.b :
SKNB1_0099_A04.b : CAGGCACCAATGACCTGTGGGACAAGCTGGagaaaaacatcctggatgacctcaccccta
TCH01_0078_C01.b : CAGGCACGAGTGACCTGTGGGGACAGCTGaagaaaacatcctggatgacctcacccctaa
TCH01_0007_H12.b : CAGGCACGAGTGACCTGTGGGAACAGCTGGAGAAAA*CATCCTGGATGACCTCACCCCTA
TES01_0075_G12.b : ggccaaaaggacctgggggaaaaaccttgaaaaaaacatcccgggaggacccccccccct
TES01_0103_F09.b : cccaggcccaaatgaaccggtggaaacacctgaaaaaaaaacttcctgaatgacctcccc
TES01_0043_E11.b : CAGGCACGAGTGACCTGTGGGACAAGCTGGAGAAAAACATCCTGGACAACCTCACCCCTA
TCH01_0069_E08.b : CAGGCACGAGTGACCTGTGGGACAAGCTGGAGAAAAACATCCTGGATGACCTCACCCCTA
20080515C-003346 : ACCTGCAGGAGGACTACGGCCAGGACTATATCCTTAAGCAACGCAGTTTTCTCAAGTTCA
---------+---------+---------+---------+---------+---------+ 1132
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b :
LVRM1_0166_C07.b :
SKNB1_0099_A04.b : cctgcaggaagactaccgccaggactatatccttaaacaacccatttttctccattcctg
TCH01_0078_C01.b : ctgcaggaagactacggccagaactatattccttagcaacgcattttctccaagtcatga
TCH01_0007_H12.b : ACCTGCAGAA*GACTACGGCCAGGACTATATCCTTAA*CAACGCAGTTTTCTCAAGTTC*
TES01_0075_G12.b : acccggcggggagactccggcccggaatttttcctttaacaaccccttttttccaatttt
TES01_0103_F09.b : cccaaccggcgggaggaacacggccaggactatttctttaaccaacccatttttcccatt
TES01_0043_E11.b : ACCTGCAGGAGGACTACGGCCAGGACTATATCCTTAAGCAACGCAGTTTTCTCAAGTTCA
TCH01_0069_E08.b : ACCTGCANGAAGACTACGGCCAGGACTATATCCTTAAGCAACGCAGTTTTCTCAAGTTCA
20080515C-003346 : TGAGCAACAGCTCTGAACCGGACGTCTCCCCAGTGCTCCTGGACGTCCAGCATGCCATCT
---------+---------+---------+---------+---------+---------+ 1192
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b :
LVRM1_0166_C07.b :
SKNB1_0099_A04.b : aaccacactcttaaaccgacttctccccgtgctcctggaactccgcatgccatctctgct
TCH01_0078_C01.b : accacaactctgaaccggacgtctccccattgctcctggacttcagactggccatttctg
TCH01_0007_H12.b : TGAGCAAAAGCTCTGAACCGGACTTCTCCCCAGTGGCTCCGGACGTCCA*CATGCCATCT
TES01_0075_G12.b : tgaaaaaaaacttttaaaccgagactccccccgggtcccgggaaccccaaaggccttttc
TES01_0103_F09.b : tcctgaacaaaagcttttaaccgaaattttccccagggccccgggaatccccaaaggcct
TES01_0043_E11.b : TGAGCAACAGCTCTGAACCGGATATCTCCCCAGTGCTCCTGTACGTCCAGCATGCCATCT
TCH01_0069_E08.b : TGAGCAACAGCTCTGAACCGGACGTCTCCCCAGTGCTCCTGGACGTCCAGCATGCCATCT
20080515C-003346 : CTGCTAAAA*CCCCTATGCATTTTACACGCCCGGAAA*ATGTCTTTTTTGTGGCTCTGCT
---------+---------+---------+---------+---------+---------+ 1250
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b :
LVRM1_0166_C07.b :
SKNB1_0099_A04.b : aaaacccctaagcattttcccccccgaaaaatgtcttttttgggcccctctttgctcctt
TCH01_0078_C01.b : ctaaaacccccatttctttttaaagcccggaaaaatgccttttttggggcctcgctttgc
TCH01_0007_H12.b : CTGCTAAAA*CCCCCTTGCATTTT*AACCCCCGGAAA*Aaagtctttttttggccgggct
TES01_0075_G12.b : ttttaaaacccctttttttttaccccccgaaaaaatttttttgggggcctcttttttttt
TES01_0103_F09.b : tccttctaaaaacccctttcctttttaccccccgcaaaaaaggccttttttggggcccgc
TES01_0043_E11.b : CTGCTAAGA*GCCCTATGCATTTA*CACGCCCGGAAA*ATGTCTTTTTTGTGGCTCTGCT
TCH01_0069_E08.b : CGGCTAAGAGCCCCTATGCATTTTACACGCCCGGAAAAATGTCTTTTTTGTGGCTCTGCT
20080515C-003346 : TTGCTTCAT...................................................
---------+---------+---------+---------+---------+---------+ 1259
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b :
LVRM1_0166_C07.b :
SKNB1_0099_A04.b : taccctctgccccattgataacttaccaaagcctcccaatttttcaagggcctgccccaa
TCH01_0078_C01.b : ttcatttaccccacgggcctatttgatatctttgcaaaagccccaatttttttaaagggg
TCH01_0007_H12.b : ttgtttcttttaccccccgtcccattttattcttttacaaaacccccaaatttttatagg
TES01_0075_G12.b : tttaccccttcgccctttttttttttttttaaaaacccctttttttttaagggggtcccc
TES01_0103_F09.b : ttttccctctttatcccccaaggccctttttaaatcctttccaaaaactccccttttttt
TES01_0043_E11.b : TTGCTTCATttagccctactgtccattttgattacttagcaaaagctcccatagtttttc
TCH01_0069_E08.b : TTGCCTCATttacccctactgtcctatttgattactttagcaaaagctcacataatttta
20080515C-003346 : ............................................................
---------+---------+---------+---------+---------+---------+ 1259
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b :
LVRM1_0166_C07.b :
SKNB1_0099_A04.b : actttaacaagcttatgaaaaaaagccccctggcccaatctttgaaaatttcttttttaa
TCH01_0078_C01.b : gaggccccaaaaatt
TCH01_0007_H12.b : ggggcccccaacctttaaagggctactggaaaaagagccctttggcaaact
TES01_0075_G12.b : cccatttttccgggctttcgagaaaaagggcctttcggaaacctc
TES01_0103_F09.b : taagggggcctcccccaacccttttacaagggttatctgaaaaataaggcttttttgcca
TES01_0043_E11.b : aaggggcctgcccaaaacattgaacaaggctaactggaaaattgaggcctgttaggcaaa
TCH01_0069_E08.b : caaggggcatgcccagaacattgaccaggctaaatggaaaatgaggccatgtaggcaata
20080515C-003346 : ............................................................
---------+---------+---------+---------+---------+---------+ 1259
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b :
LVRM1_0166_C07.b :
SKNB1_0099_A04.b : aaaaggaaaccccctcccctaaatggggttatcctaaaaaaaaaaaaaaaaaaaagcgct
TCH01_0078_C01.b :
TCH01_0007_H12.b :
TES01_0075_G12.b :
TES01_0103_F09.b : ataatgggaaaaattctctttttgaaagaaaaggaaatcccccctcccccaaaagagggg
TES01_0043_E11.b : acctgggaaatgtcttttgcctggaagaaagggaatccctgcctccccataaaatgtggg
TCH01_0069_E08.b : cttgggaaatgtctattgttgaaagaaaaggagttcccgcttcccataaaaatggggtta
20080515C-003346 : ............................................................
---------+---------+---------+---------+---------+---------+ 1259
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b :
LVRM1_0166_C07.b :
SKNB1_0099_A04.b : gtctcctctcgtct
TCH01_0078_C01.b :
TCH01_0007_H12.b :
TES01_0075_G12.b :
TES01_0103_F09.b : gtctcccaaaaaaaaaaaaaaaaggccccttg
TES01_0043_E11.b : ttttccctcccaaagctcctctcttaaaaataattattaagggcctttgtgttcacatct
TCH01_0069_E08.b : acctaaaaaaaaaaaaaaaaaaagccaatggggtccaactcaggtccgcccccctaaata
20080515C-003346 : ............................................................
---------+---------+---------+---------+---------+---------+ 1259
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b :
LVRM1_0166_C07.b :
SKNB1_0099_A04.b :
TCH01_0078_C01.b :
TCH01_0007_H12.b :
TES01_0075_G12.b :
TES01_0103_F09.b :
TES01_0043_E11.b : aggccggcccctaaaattctaaaaaaaactccccccccccccgaaccaaaaaaaaaagaa
TCH01_0069_E08.b : tccctggagggccaagttaccgtacccttttttgaaaaagggcccctagaggccgttaaa
20080515C-003346 : ............................................................
---------+---------+---------+---------+---------+---------+ 1259
LVRM1_0184_D03.b :
LVRM1_0122_H12.b :
LVR01_0053_A10.b :
LVRM1_0166_C07.b :
SKNB1_0099_A04.b :
TCH01_0078_C01.b :
TCH01_0007_H12.b :
TES01_0075_G12.b :
TES01_0103_F09.b :
TES01_0043_E11.b : gcatgtttgttaactggtttgcccctaaaggaacaaaaa
TCH01_0069_E08.b : aagagccgggccgcttttaacacctgaggaaaaacctcttggt
TOP
TOP