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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20101001C-011175

Length: 1,216

Sequence:  [FASTA format sequence]
CTCGACCCCG ACGCCGCTGC CGCCGCAGGC CCCTCCACGC CCACACCCCC TACCCACTGC
CCAGCCATGG AGGCCATCAA GAAGAAGATG CAGATGCTGA AGCTGGACAA GGAGAACGCC
ATCGACCGGG CCGAGCAGGC GGAGTCGGAT AAGAAAGCTG CTGAGGAGAA GTGCAAGCAG
GTGGAGGAGG AGCTGACGCA CCTCCAGAAG AAGCTGAAGG GGACAGAGGA TGAGCTGGAC
AAATACTCCG AGAACCTGAA GGACGCGCAG GAAAAGCTGG AGCTGAGCGA GAAGAAAGCC
TCCGACGCCG AAGGGGATGT AGCAGCTCTC AATCGGCGCA TCCAACTCGT TGAGGAGGAG
TTGGACAGGG CTCAGGAACG ACTGGCCACA GCCCTGCAGA AGCTTGAGGA GGCAGAAAAG
GCTGCAGATG AGAGCGAGAG AGGAATGAAG GTGATAGAAA ACCGGGCCAT GAAAGATGAG
GAGAAGATGG AGATTCAGGA GATGCAGCTC AAAGAGGCCA AGCACATTGC CGAGGAGGCC
GACCGCAAAT ACGAGGAGGT AGCTCGTAAG TTGGTCATCC TGGAGGGCGA GCTGGAGAGG
GCAGAGGAGC GTGCCGAGGT GTCTGAACTA AAATGTGGTG ACCTGGAAGA AGAACTCAAG
AATGTCACCA ACAACCTGAA GTCGCTAGAG GCTGCATCTG AAAAGTATTC TGAAAAGGAG
GATAAATATG AAGAAGAGAT TAAACTTCTG TCTGACAAAC TGAAAGAGGC TGAGACCCGT
GCTGAATTTG CAGAGAGAAC AGTTGCAAAA CTGGAAAAGA CCATCGATGA CCTGGAAGAA
AAACTTGTCC AGGCCAAAGA AAAGAACGTG GGCTTTACTC AAACACTGGA TCCGACACTA
AACGACCTAA ACTGTATATA ACCAAACCAA AAAAATCTCG TTCCCTCCAA AACTTCCCAA
GCTACGTTGT TTTTCCCCTT CTCTTGTAAG AAAGTTTTCT TTTGTTTTTT GCCCCCTTTG
CTTTTGCCTG AAAAAGGGCA AGGCAAAATT TATAAATACC CGTGAACCCA ATATTTTTTT
TGTTATCAAA AAAAAACTTT TTTAAACCCC CCAAGTTTAA AAATTCTTTT TTTCCTTTTC
CCTTTTTTTT TTTTCCAAGG GTGGGCCCCC CCCCCCCCTT TTTTTTTTCT CCCACCCCTT
CTTTTTTTTT TTTTTT

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL

Alignment:      TOP

20101001C-011175 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
OVRM1_0200_C05.b :                            gagttgtcatxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0094_A06.b :                            tagttgtcxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0062_E04.b : gccttttatgggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20101001C-011175 : ............................CTCGACCCCGACGCCGCTGCCGCCGCAGGCCC
                   ---------+---------+---------+---------+---------+---------+ 32
OVRM1_0200_C05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGACCCCGACGCCGCTGCCGCCGCAGGCCC
OVRM1_0094_A06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGACACCGACGCCGCTGCCGCCGCAGGCCC
UTR01_0062_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCGACCCCGACGCCGCTGCCGCCGCAGGCCC


20101001C-011175 : CTCCACGCCCACACCCCCTACCCACTGCCCAGCCATGGAGGCCATCAAGAAGAAGATGCA
                   ---------+---------+---------+---------+---------+---------+ 92
OVRM1_0200_C05.b : CTCCACGCCCACACCCCCTACCCACTGCCCAGCCATGGAGGCCATCAAGAAGAAGATGCA
OVRM1_0094_A06.b : CTCCACGCCCACACCCCCTACCCACTGCCCAGCCATGGAGGCCATCAAGAAGAAGATGCA
UTR01_0062_E04.b : CTCCACGCCCACACCCCCTACCCACTGCCCAGCCATGGAGGCCATCAAGAAGAAGATGCA


20101001C-011175 : GATGCTGAAGCTGGACAAGGAGAACGCCATCGACCGGGCCGAGCAGGCGGAGTCGGATAA
                   ---------+---------+---------+---------+---------+---------+ 152
OVRM1_0200_C05.b : GATGCTGAAGCTGGACAAGGAGAACGCCATCGACCGGGCCGAGCAGGCGGAGTCGGATAA
OVRM1_0094_A06.b : GATGCTGAAGCTGGACAAGGAGAACGCCATCGACCGGGCCGAGCAGGCGGAGTCGGATAA
UTR01_0062_E04.b : GATGCTGAAGCTGGACAAGGAGAACGCCATCGACCGGGCCGAGCAGGCGGAGTCGGATAA


20101001C-011175 : GAAAGCTGCTGAGGAGAAGTGCAAGCAGGTGGAGGAGGAGCTGACGCACCTCCAGAAGAA
                   ---------+---------+---------+---------+---------+---------+ 212
OVRM1_0200_C05.b : GAAAGCTGCTGAGGAGAAGTGCAAGCAGGTGGAGGAGGAGCTGACGCACCTCCAGAAGAA
OVRM1_0094_A06.b : GAAAGCTGCTGAGGAGAAGTGCAAGCAGGTGGAGGAGGAGCTGACGCACCTCCAGAAGAA
UTR01_0062_E04.b : GAAAGCTGCTGAGGAGAAGTGCAAGCAGGTGGAGGAGGAGCTGACGCACCTCCAGAAGAA


20101001C-011175 : GCTGAAGGGGACAGAGGATGAGCTGGACAAATACTCCGAGAACCTGAAGGACGCGCAGGA
                   ---------+---------+---------+---------+---------+---------+ 272
OVRM1_0200_C05.b : GCTGAAGGGGACAGAGGATGAGCTGGACAAATACTCCGAGAACCTGAAGGACGCGCAGGA
OVRM1_0094_A06.b : GCTGAAGGGGACAGAGGATGAGCTGGACAAATACTCCGAGAACCTGAAGGACGCGCAGGA
UTR01_0062_E04.b : GCTGAAGGGGACAGAGGATGAGCTGGACAAATACTCCGAGAACCTGAAGGACGCGCAGGA


20101001C-011175 : AAAGCTGGAGCTGAGCGAGAAGAAAGCCTCCGACGCCGAAGGGGATGTAGCAGCTCTCAA
                   ---------+---------+---------+---------+---------+---------+ 332
OVRM1_0200_C05.b : AAAGCTGGAGCTGAGCGAGAAGAAAGCCTCCGACGCCGAAGGGGATGTAGCAGCTCTCAA
OVRM1_0094_A06.b : AAAGCTGGAGTTGAGCGAGAAGAAAGCCTCCGACGCCGAAGGGGATGTAGCAGCTCTCAA
UTR01_0062_E04.b : AAAGCTGGAGCTGAGCGAGAAGAAAGCCTCCGACGCCGAAGGGGATGTAGCAGCTCTCAA


20101001C-011175 : TCGGCGCATCCAACTCGTTGAGGAGGAGTTGGACAGGGCTCAGGAACGACTGGCCACAGC
                   ---------+---------+---------+---------+---------+---------+ 392
OVRM1_0200_C05.b : TCGGCGCATCCAACTCGTTGAGGAGGAGTTGGACAGGGCTCAGGAACGACTGGCCACAGC
OVRM1_0094_A06.b : TCGGCGCATCCAACTCGTTGAGGAGGAGTTGGACAGGGCTCAGGAACGACTGGCCACAGC
UTR01_0062_E04.b : TCGGCGCATCCAACTCGTTGAGGAGGAGTTGGACAGGGCTCAGGAACGACTGGCCACAGC


20101001C-011175 : CCTGCAGAAGCTTGAGGAGGCAGAAAAGGCTGCAGATGAGAGCGAGAGAGGAATGAAGGT
                   ---------+---------+---------+---------+---------+---------+ 452
OVRM1_0200_C05.b : CCTGCAGAAGCTTGAGGAGGCAGAAAAGGCTGCAGATGAGAGCGAGAGAGGAATGAAGGT
OVRM1_0094_A06.b : CCTGCAGAAGCTTGAGGAGGCAGAAAAGGCTGCAGATGAGAGCGAGAGAGGAATGAAGGT
UTR01_0062_E04.b : CCTGCAGAAGCTTGAGGAGGCAGAAAAGGCTGCAGATGAGAGCGAGAGAGGAATGAAGGT


20101001C-011175 : GATAGAAAACCGGGCCATGAAAGATGAGGAGAAGATGGAGATTCAGGAGATGCAGCTCAA
                   ---------+---------+---------+---------+---------+---------+ 512
OVRM1_0200_C05.b : GATAGAAAACCGGGCCATGAAAGATGAGGAGAAGATGGAGATTCAGGAGATGCAGCTCAA
OVRM1_0094_A06.b : GATAGAAAACCGGGCCATGAAAGATGAGGAGAAGATGGAGATTCGGGAGATGCAGCTCAA
UTR01_0062_E04.b : GATAGAAAACCGGGCCATGAAAGATGAGGAGAAGATGGAGATTCAGGAGATGCAGCTCAA


20101001C-011175 : AGAGGCCAAGCACATTGCCGAGGAGGCCGACCGCAAATACGAGGAGGTAGCTCGTAAGTT
                   ---------+---------+---------+---------+---------+---------+ 572
OVRM1_0200_C05.b : AGAGGCCAAGCACATTGCCGAGGAGGCCGACCGCAAATACGAGGAGGTAGCTCGTAAGTT
OVRM1_0094_A06.b : AGAGGCCAAGCACATTGCCGAGGAGGCCGACCGCAAATACGAGGAGGTAGCTCGTAAGTT
UTR01_0062_E04.b : AGAGGCCAAGCACATTGCCGAGGAGGCCGACCGCAAATACGAGGAGGTAGCTCGTAAGTT


20101001C-011175 : GGTCATCCTGGAGGGCGAGCTGGAGAGGGCAGAGGAGCGTGCCGAGGTGTCTGAACTAAA
                   ---------+---------+---------+---------+---------+---------+ 632
OVRM1_0200_C05.b : GGTCATCCTGGAGGGCGAGCTGGAGAGGGCAGAGGAGCGTGCCGAGGTGTCTGAACTAAA
OVRM1_0094_A06.b : GGTCATCCTGGAGGGCGAGCTGGAGAGGGCAGAGGAGCGTGCCGAGGTGTCTGAACTAAA
UTR01_0062_E04.b : GGTCATCCTGGAGGGCGAGCTGGAGAGGGCAGAGGAGCGTGCCGAGGTGTCTGAACTAAA


20101001C-011175 : ATGTGGTGACCTGGAAGAAGAACTCAAGAATGTCACCAACAACCTGAAGTCGCTAGAGGC
                   ---------+---------+---------+---------+---------+---------+ 692
OVRM1_0200_C05.b : ATGTGGTGACCTGGAAGAAGAACTCAAGAATGTCACCAACAACCTGAAGTCGCTAGAGGC
OVRM1_0094_A06.b : ATGTGGTGACCTGGAAGAAGAACTCTAGAATGTCACCAACAACCTGAAGTCGCTAGAGGC
UTR01_0062_E04.b : ATGTGGTGACCTGGAAGAAGAACTCAAGAATGTCACCAACAACCTGAAGTCGCTAGAGGC


20101001C-011175 : TGCATCTGAAAAGTATTCTGAAAAGGAGGATAAATATGAAGAAGAGATTAAACTTCTGTC
                   ---------+---------+---------+---------+---------+---------+ 752
OVRM1_0200_C05.b : TGNCATCTGAAAGTATTCTGAAAAGGAGGATAAATATGAn                   
OVRM1_0094_A06.b : TGCATCTCGAAAGTATTCTGAAAAGGAGGATAAATACGAAGAAGAGATTCAACTTCTGTC
UTR01_0062_E04.b : TGCATCTGAAAAGTATTCTGAAAAGGAGGATAAATATGAAGAAGAGATTAAACTTCTGTC


20101001C-011175 : TGACAAACTGAAAGAGGCTGAGACCCGTGCTGAATTTGCAGAGAGAACAGTTGCAAAACT
                   ---------+---------+---------+---------+---------+---------+ 812
OVRM1_0200_C05.b :                                                             
OVRM1_0094_A06.b : TGACAAACTGAAAGAGGCT                                        
UTR01_0062_E04.b : TGACAAACTGAAAGAGGCTGAGACCCGTGCTGAATTTGCAGAGAGAACAGTTGCAAAACT


20101001C-011175 : GGAAAAGACCATCGATGACCTGGAAGAAAAACTTGTCCAGGCCAAAGAAAAGAACGTGGG
                   ---------+---------+---------+---------+---------+---------+ 872
OVRM1_0200_C05.b :                                                             
OVRM1_0094_A06.b :                                                             
UTR01_0062_E04.b : GGAAAAGACCATCGATGACCTGGAAGAAAAACTTGTCCAGGCCAAAGAAAAGAACGTGGG


20101001C-011175 : CTTTACTCAAACACTGGATCCGACACTAAACGACCTAAACTGTATATAACCAAACCAAAA
                   ---------+---------+---------+---------+---------+---------+ 932
OVRM1_0200_C05.b :                                                             
OVRM1_0094_A06.b :                                                             
UTR01_0062_E04.b : CTTTACTCAAACACTGGATCCGACACTAAACGACCTAAACTGTATATAACCAAACCAAAA


20101001C-011175 : AAATCTCGTTCCCTCCAAAACTTCCCAAGCTACGTTGTTTTTCCCCTTCTCTTGTAAGAA
                   ---------+---------+---------+---------+---------+---------+ 992
OVRM1_0200_C05.b :                                                             
OVRM1_0094_A06.b :                                                             
UTR01_0062_E04.b : AAATCTCGTTCCCTCCAAAACTTCCCAAGCTACGTTGTTTTTCCCCTTCTCTTGTAAGAA


20101001C-011175 : AGTTTTCTTTTGTTTTTTGCCCCCTTTGCTTTTGCCTGAAAAAGGGCAAGGCAAAATTTA
                   ---------+---------+---------+---------+---------+---------+ 1052
OVRM1_0200_C05.b :                                                             
OVRM1_0094_A06.b :                                                             
UTR01_0062_E04.b : AGTTTTCTTTTGTTTTTTGCCCCCTTTGCTTTTGCCTGAAAAAGGGCAAGGCAAAATTTA


20101001C-011175 : TAAATACCCGTGAACCCAATATTTTTTTTGTTATCAAAAAAAAACTTTTTTAAACCCCCC
                   ---------+---------+---------+---------+---------+---------+ 1112
OVRM1_0200_C05.b :                                                             
OVRM1_0094_A06.b :                                                             
UTR01_0062_E04.b : TAAATACCCGTGAACCCAATATTTTTTTTGTTATCAAAAAAAAACTTTTTTAAACCCCCC


20101001C-011175 : AAGTTTAAAAATTCTTTTTTTCCTTTTCCCTTTTTTTTTTTTCCAAGGGTGGGCCCCCCC
                   ---------+---------+---------+---------+---------+---------+ 1172
OVRM1_0200_C05.b :                                                             
OVRM1_0094_A06.b :                                                             
UTR01_0062_E04.b : AAGTTTAAAAATTCTTTTTTTCCTTTTCCCTTTTTTTTTTTTCCAAGGGTGGGCCCCCCC


20101001C-011175 : CCCCCCTTTTTTTTTTCTCCCACCCCTTCTTTTTTTTTTTTTTT................
                   ---------+---------+---------+---------+---------+---------+ 1216
OVRM1_0200_C05.b :                                                             
OVRM1_0094_A06.b :                                                             
UTR01_0062_E04.b : CCCCCCTTTTTTTTTTCTCCCACCCCTTCTTTTTTTTTTTTTTT