[Overview] [RefSeq] [Assembly & SNP]
Assembly Name: 20101001S-058361
Length:
1,196
Sequence:
[FASTA format sequence]
CTTAGGGTGA ATATANNGAC XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXXXXXXXXX XXGTGTTCGT GTAGGGGAGG CTGGAAGCCG CAGGAGCGGG
AGACGGTGGA GGGGATTTTG AGAAGAAAAC TGCGGTAGCG ACCTCACTCG GTGGTACAAG
AGGGGAACGC TAGTCCCTCC GAAAGCCGGG TTACTGCGAA CGCACCAGCT GAGCCCTTAG
TACTGCAACC CCCACCCTCC TTTGGTTTGT GGAGGAGCCT GACCACTCTG CCTCTTATGG
CCACAATGCT GACCGCCCGC CTCTCCAGAC CCCTGTCGCA GCTCCCAAGG AAAACCCTGA
ATTTCTCTGA GAGAGAAAAT GGAGCAAGAG GCTCGCTGCT GTTTTACTCT CCCTCCTTTG
TCCCTGGCAG CCGTCGGACT TATGCTGATT CGGTGAACCC GGTTGGCAGC AAAGCTGTCC
TGGTCACAGG CTGTGACTCT GGATTTGGGT TCTCACTGGC CAAGCATCTG CATTCAAAAG
GCTTCCTTGT ATTTGCTGGC TGCTTGATGA AGGACAAAGG GCATGACGGG GTCAAGGAAC
TGGACAGCTT GAAGAGTGAT CGATTAAGAA CCGTCCAGCT CAATGTCTGC AAAAGTGAAG
AAGTAGAGAA AGTGGTGGAG ACCATCCGCT CGAGCTTGCA GGACCCTGAG AAAGGCTTGT
GGGGCCTGGT TAACAATGCA GGCATCTCAA CGTTCGGGGA CGTGGAATTC ACCAGCATGG
AGACCTACAA GGAGGTGGCA GAAGTGAACC TCTGGGGCAC GGTGCGGGTG ACAAAATCCT
TTCTCCCTCT CATCCGGAGG GCCAAAGATT TCCAAGAAAC AACAACCTCA AAATGTCCAA
GTCATCAAGG ACCCCATCTG GACGGGAAAG CTTGGTACTG CTCGCTGTTT TACTACCAAG
TTCCCTTGTC ACCTGGGCAA GTCCCTTCTC CATTTTCCAC CTCACTCTCC TCATTTAAAA
ATAGCAGTAA TGACAACAAT CATAACCATT CCTAACACGC TGTGACCCAG GCAGAACATG
CTCTAAAACC AACTGCCTGC CTAATTTCTA CCACCCCTTT TAAGGGAAAC AGCAGTTATT
TTTTATTTCC CGGAAAAACC CCCAAAACAA CCCCAGGGTT TTTTTCATTT TTGCCCCCCA
AGGTTTCCCC CCCCCCAACC AAAAAAGTTC TAAAAAAATG GGAAAGAAAA AAAACTTTTT
TTTAAAAAAA AAAAACAAAA ACCCCC
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) |
|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | BDH1 | "D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor [Homo sapiens]. " | 287 | 2e-77 | O |
|
| BDH1 | "D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor [Homo sapiens]. " | 287 | 2e-77 | O |
|
| BDH1 | "D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor [Homo sapiens]. " | 287 | 2e-77 | O |
|
| HSD17B2 | estradiol 17-beta-dehydrogenase 2 [Homo sapiens]. | 98.6 | 1e-20 | O |
|
| DHRS9 | dehydrogenase/reductase SDR family member 9 [Homo sapiens]. | 92.4 | 7e-19 | O |
|
| DHRS9 | dehydrogenase/reductase SDR family member 9 [Homo sapiens]. | 92.4 | 7e-19 | O |
|
| DHRS9 | dehydrogenase/reductase SDR family member 9 [Homo sapiens]. | 92.4 | 7e-19 | O |
|
| DHRS9 | dehydrogenase/reductase SDR family member 9 [Homo sapiens]. | 92.4 | 7e-19 | O |
|
| RDH16 | retinol dehydrogenase 16 [Homo sapiens]. | 92 | 9e-19 | O |
|
| HSD17B6 | 17-beta-hydroxysteroid dehydrogenase type 6 precursor [Homo sapiens]. | 90.1 | 4e-18 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Bdh1 | "D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor [Mus musculus]. " | 278 | 6e-75 | O |
|
| Bdh1 | "D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor [Mus musculus]. " | 278 | 6e-75 | O |
|
| Hsd17b2 | estradiol 17-beta-dehydrogenase 2 [Mus musculus]. | 108 | 8e-24 | O |
|
| Rdh7 | retinol dehydrogenase 7 [Mus musculus]. | 94 | 2e-19 | O |
|
| Rdh7 | retinol dehydrogenase 7 [Mus musculus]. | 94 | 2e-19 | O |
|
| Rdh16 | retinol dehydrogenase 16 [Mus musculus]. | 94 | 2e-19 | O |
|
| Rdh1 | retinol dehydrogenase 1 (all trans) [Mus musculus]. | 93.6 | 3e-19 | O |
|
| Hsd11b2 | corticosteroid 11-beta-dehydrogenase isozyme 2 [Mus musculus]. | 92 | 8e-19 | O |
|
| Rdh9 | retinol dehydrogenase 9 [Mus musculus]. | 90.9 | 2e-18 | O |
|
| Dhrs9 | dehydrogenase/reductase SDR family member 9 precursor [Mus musculus]. | 90.1 | 3e-18 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC488037 | PREDICTED: similar to 3-hydroxybutyrate dehydrogenase precursor [Canis familiaris]. | 226 | 4e-59 | O |
|
| LOC489690 | PREDICTED: similar to hydroxysteroid (17-beta) dehydrogenase 2 [Canis familiaris]. | 99.8 | 5e-21 | O |
|
| LOC481118 | PREDICTED: similar to 3-hydroxysteroid epimerase isoform 3 [Canis familiaris]. | 90.1 | 4e-18 | O |
|
| LOC481118 | PREDICTED: similar to 3-hydroxysteroid epimerase isoform 4 [Canis familiaris]. | 90.1 | 4e-18 | O |
|
| LOC488391 | PREDICTED: similar to NADP-dependent retinol dehydrogenase/reductase [Canis familiaris]. | 87.4 | 2e-17 | |
|
| LOC474409 | PREDICTED: similar to microsomal NAD+-dependent retinol dehydrogenase 4 isoform 2 [Canis familiaris]. | 86.7 | 4e-17 | O |
|
| LOC474409 | PREDICTED: similar to microsomal NAD+-dependent retinol dehydrogenase 4 isoform 1 [Canis familiaris]. | 86.7 | 4e-17 | O |
|
| LOC481119 | PREDICTED: similar to orphan short-chain dehydrogenase / reductase [Canis familiaris]. | 80.5 | 3e-15 | O |
|
| LOC481099 | PREDICTED: similar to 11-cis retinol dehydrogenase (11-cis RDH) [Canis familiaris]. | 77 | 3e-14 | O |
|
| HSD11B2 | "PREDICTED: similar to Corticosteroid 11-beta-dehydrogenase, isozyme 2 (11-DH2) (11-beta-hydroxysteroid dehydrogenase type 2) (11-beta-HSD2) (NAD-dependent 11-beta-hydroxysteroid dehydrogenase) [Canis familiaris]. " | 75.5 | 9e-14 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| BDH1 | "D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor [Bos taurus]. " | 308 | 6e-84 | O |
|
| HSD17B2 | estradiol 17-beta-dehydrogenase 2 [Bos taurus]. | 105 | 1e-22 | O |
|
| HSD17B6 | 17-beta-hydroxysteroid dehydrogenase type 6 precursor [Bos taurus]. | 100 | 3e-21 | O |
|
| HSD11B2 | corticosteroid 11-beta-dehydrogenase isozyme 2 [Bos taurus]. | 94 | 2e-19 | O |
|
| RDH16 | retinol dehydrogenase 16 [Bos taurus]. | 91.7 | 1e-18 | O |
|
| DHRS9 | dehydrogenase/reductase SDR family member 9 precursor [Bos taurus]. | 88.2 | 1e-17 | O |
|
| SDR9C7 | short-chain dehydrogenase/reductase family 9C member 7 [Bos taurus]. | 81.3 | 2e-15 | O |
|
| RDH5 | 11-cis retinol dehydrogenase [Bos taurus]. | 76.3 | 5e-14 | O |
|
| RDH8 | retinol dehydrogenase 8 [Bos taurus]. | 52.4 | 8e-07 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC100511473 | "PREDICTED: d-beta-hydroxybutyrate dehydrogenase, mitochondrial-like [Sus scrofa]. " | 239 | 2e-63 | O |
|
| BDH1 | "PREDICTED: d-beta-hydroxybutyrate dehydrogenase, mitochondrial [Sus scrofa]. " | 169 | 2e-42 | O |
|
| LOC100156120 | "PREDICTED: d-beta-hydroxybutyrate dehydrogenase, mitochondrial-like, partial [Sus scrofa]. " | 103 | 1e-22 | O |
|
| HSD17B2 | estradiol 17-beta-dehydrogenase 2 [Sus scrofa]. | 97.4 | 1e-20 | O |
|
| HSD11B2 | corticosteroid 11-beta-dehydrogenase isozyme 2 [Sus scrofa]. | 94 | 1e-19 | O |
|
| LOC100519223 | PREDICTED: dehydrogenase/reductase SDR family member 9-like isoform 2 [Sus scrofa]. | 89.4 | 3e-18 | O |
|
| LOC100519223 | PREDICTED: dehydrogenase/reductase SDR family member 9-like isoform 1 [Sus scrofa]. | 89.4 | 3e-18 | O |
|
| LOC100519057 | "PREDICTED: dehydrogenase/reductase SDR family member 9-like, partial [Sus scrofa]. " | 89.4 | 3e-18 | O |
|
| LOC100512656 | PREDICTED: retinol dehydrogenase 16-like isoform 2 [Sus scrofa]. | 87.4 | 1e-17 | O |
|
| LOC100512656 | PREDICTED: retinol dehydrogenase 16-like isoform 1 [Sus scrofa]. | 87.4 | 1e-17 | O |
|
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