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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-000333

Length: 1,311

Sequence:  [FASTA format sequence]
GGAGCAAGAT GGCTGCGCCC GAAGCTGCCA CGGTGCCGCA AGCTTCCGGG GGTCCCCGGG
CTCCGGCGTG CCTGTTGGTG CTGGGAATGG CGGGGTCTGG GAAAACCACC TTTGTACAGA
GGCTCACCGG ACATCTGCAT AGTCAAGGCT CTCCACCTTA TGTGATCAAC CTGGACCCAG
CTGTGCATGA AGTTCCCTTT CCTGCCAATA TTGATATTCG TGACACTGTG AAGTATAAAG
AAGTCATGAA ACAGTATGGA CTTGGACCGA ACGGCGGCAT AGTGACCTCA CTCAATCTCT
TTGCTAGCCT GGAGCCCCGG CTTCTCAGAC AACATGAAGA CTCTCCTCGT TCTTGCGCTT
CTCCTCCTTT CTGTCTCTGT ACAGGCCAAG GTCTATGATC GGTGCGAGTT CGCCAGAATT
CTGAAAAAGT CTGGCATGGA CGGCTATAGG GGAGTCAGCC TGGCGAACTG GGTGTGTTTG
GCCAAGTGGG AAAGTGATTT TAACACAAAA GCTATAAACC ACAATGTTGG AAGCACTGAT
TATGGAATAT TTCAAATTAA TAGCCGCTAC TGGTGTAATG ATGGCAAGAC ACCCAAAGCA
GTTAATGCCT GTCACATATC CTGCAAAGTT TTGCTGGACG ATGACCTCAG TCAAGATATA
GAATGTGCAA AGAGGGTTGT CAGAGATCCA CTAGGCGTTA AAGCATGGGT GGCATGGAGA
GCTCATTGTC AGAACAAAGA TGTCTCGCAG TACATTCGGG GTTGCAAACT GTAACTGTGC
AGTTTTCCTT CTTCAGCTCA CCTTGTCTCT TTTTCATATT TAGGAAATAA TAGTTGAATG
AAAGGTCATA CTACCATTCT TGCGAACAAA TCATGGTTTT ACCGAAGCAA GAGCATAAGG
TCTTTCTTTA AGAGGCTTAA TGTTTACCTA ATGTGTTTAT TGTTTGTGTT TATTGTTTTA
TAGGCCTACA ATATTTTTCA ATTTGCTAAG AGAATTATTG TTGGTCTGAA ATCTTAATTA
TCAAATATAC CTCCAGTACA TTCAGTTCTT AATCAAAGAA ATAAACCAGA AACAGTCTTC
ATCTGTTCAG TTATCTCTAA AAACAGTAAA AGATAACCAG TCTTTGTTGG GTAATATAAA
ATTTTAAAAG GAGCAGAATG CCAGATGGCT TAAAATGAAG ACAACCTGAA TTAAGAATTT
TGCTTTCATA AAGTGTGACC TTTGGCTTAA ATGTTTTCTC AAAGATGATT CGTTCATTTA
AACGAATTTT AAAATAGTCT CACATTTAGG TATCCATCTC TTTTAGCCTT T

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		LYZ	lysozyme C precursor [Homo sapiens].	213	2e-55	O
		GPN1	GPN-loop GTPase 1 isoform a [Homo sapiens].	186	4e-47
		SPACA5B	sperm acrosome-associated protein 5 precursor [Homo sapiens].	142	5e-34	O
		SPACA5	sperm acrosome-associated protein 5 precursor [Homo sapiens].	142	5e-34	O
		SPACA3	sperm acrosome membrane-associated protein 3 [Homo sapiens].	140	3e-33	O
		LYZL1	lysozyme-like protein 1 [Homo sapiens].	136	4e-32	O
		LYZL6	lysozyme-like protein 6 precursor [Homo sapiens].	134	2e-31	O
		LYZL6	lysozyme-like protein 6 precursor [Homo sapiens].	134	2e-31	O
		LYZL2	lysozyme-like protein 2 [Homo sapiens].	134	2e-31	O
		GPN1	GPN-loop GTPase 1 isoform b [Homo sapiens].	133	3e-31	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Lyz2	lysozyme C-2 precursor [Mus musculus].	214	2e-55	O
		Lyz1	lysozyme C-1 precursor [Mus musculus].	208	7e-54	O
		Gpn1	GPN-loop GTPase 1 [Mus musculus].	180	2e-45	O
		9530003J23Rik	lysozyme C-like [Mus musculus].	174	1e-43	O
		Spaca5	sperm acrosome-associated protein 5 precursor [Mus musculus].	140	3e-33	O
		Lyzl1	lysozyme-like protein 1 precursor [Mus musculus].	139	4e-33	O
		Spaca3	sperm acrosome membrane-associated protein 3 [Mus musculus].	139	6e-33	O
		Lyzl6	lysozyme-like protein 6 precursor [Mus musculus].	135	5e-32	O
		Lyzl4	lysozyme-like protein 4 precursor [Mus musculus].	109	5e-24	O
		Lalba	alpha-lactalbumin precursor [Mus musculus].	104	2e-22	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC474442	PREDICTED: similar to lysozyme precursor [Canis familiaris].	218	1e-56	O
		LOC475707	PREDICTED: similar to XPA binding protein 1 isoform 1 [Canis familiaris].	185	7e-47	O
		LOC475707	PREDICTED: similar to XPA binding protein 1 isoform 2 [Canis familiaris].	185	7e-47	O
		LOC608308	PREDICTED: similar to XPA binding protein 1 isoform 6 [Canis familiaris].	185	7e-47	O
		LOC608308	PREDICTED: similar to XPA binding protein 1 isoform 1 [Canis familiaris].	185	7e-47	O
		LOC610638	PREDICTED: similar to XPA binding protein 1 [Canis familiaris].	165	8e-41	O
		LOC609038	PREDICTED: similar to lysozyme [Canis familiaris].	165	1e-40	O
		SPACA3	sperm acrosome membrane-associated protein 3 [Canis lupus familiaris].	142	7e-34	O
		LOC480901	PREDICTED: similar to PNPK6288 [Canis familiaris].	137	2e-32	O
		LOC487083	PREDICTED: similar to lysozyme-like protein 2 [Canis familiaris].	134	2e-31	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		LYZ1	lysozyme C, milk isozyme precursor [Bos taurus].	209	4e-54	O
		LYZ	lysozyme C, non-stomach isozyme precursor [Bos taurus].	205	6e-53	O
		LYZ1	lysozyme C-1 precursor [Bos taurus].	190	3e-48	O
		GPN1	GPN-loop GTPase 1 [Bos taurus].	189	6e-48	O
		LYZ3	lysozyme C-3 precursor [Bos taurus].	189	5e-48	O
		LYZ2	lysozyme C-2 precursor [Bos taurus].	189	6e-48	O
		LOC785803	PREDICTED: lysozyme 14D [Bos taurus].	179	4e-45	O
		LOC785803	PREDICTED: lysozyme 14D [Bos taurus].	179	4e-45	O
		LYSB	lysozyme C, intestinal isozyme precursor [Bos taurus].	178	8e-45	O
		LOC781146	lysozyme C, tracheal isozyme precursor [Bos taurus].	176	3e-44	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		LYZ	lysozyme C-3 precursor [Sus scrofa].	282	3e-76	O
		LOC100521316	PREDICTED: GPN-loop GTPase 1-like [Sus scrofa].	204	1e-52	O
		SPACA3	sperm acrosome membrane-associated protein 3 [Sus scrofa].	149	3e-36	O
		SPACA5	sperm acrosome-associated protein 5 [Sus scrofa].	143	2e-34	O
		LOC100517051	PREDICTED: lysozyme-like protein 1-like [Sus scrofa].	142	5e-34	O
		LOC100522642	PREDICTED: lysozyme-like protein 4-like isoform 1 [Sus scrofa].	120	2e-27	O
		LOC100522642	PREDICTED: lysozyme-like protein 4-like isoform 2 [Sus scrofa].	120	2e-27	O
		LALBA	alpha-lactalbumin precursor [Sus scrofa].	109	4e-24	O
		GPN3	GPN-loop GTPase 3 [Sus scrofa].	58.5	8e-09	O
		LOC100525877	PREDICTED: GPN-loop GTPase 2-like [Sus scrofa].	57	2e-08	O

Alignment:      TOP

20110601C-000333 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
CLNT1_0032_E01.b : ttttacgtctgcgnacgagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0063_B05.b :                                                             
CLNT1_0016_A08.b :                                                             
CLNT1_0054_F02.b :                                                             
CLNT1_0083_G02.b :                                                             
SKNB1_0065_D10.b :                                                             


20110601C-000333 : ............GGAGCAAGATGGCTGCGCCCGAAGCTGCCACGGTGCCGCAAGCTTCCG
                   ---------+---------+---------+---------+---------+---------+ 48
CLNT1_0032_E01.b : xxxxxxxxxxxxGGAGCAAGATGGCTGCGCCCGAAGCTGCCACGGTGCCGCAAGCTTCCG
CLNT1_0063_B05.b :                                                             
CLNT1_0016_A08.b :                                                             
CLNT1_0054_F02.b :                                                             
CLNT1_0083_G02.b :                                                             
SKNB1_0065_D10.b :                                                             


20110601C-000333 : GGGGTCCCCGGGCTCCGGCGTGCCTGTTGGTGCTGGGAATGGCGGGGTCTGGGAAAACCA
                   ---------+---------+---------+---------+---------+---------+ 108
CLNT1_0032_E01.b : GGGGTCCCCGGGCTCCGGCGTGCCTGTTGGTGCTGGGAATGGCGGGGTCTGGGAAAACCA
CLNT1_0063_B05.b :                                                             
CLNT1_0016_A08.b :                                                             
CLNT1_0054_F02.b :                                                             
CLNT1_0083_G02.b :                                                             
SKNB1_0065_D10.b :                                                             


20110601C-000333 : CCTTTGTACAGAGGCTCACCGGACATCTGCATAGTCAAGGCTCTCCACCTTATGTGATCA
                   ---------+---------+---------+---------+---------+---------+ 168
CLNT1_0032_E01.b : CCTTTGTACAGAGGCTCACCGGACATCTGCATAGTCAAGGCTCTCCACCTTATGTGATCA
CLNT1_0063_B05.b :                                                             
CLNT1_0016_A08.b :                                                             
CLNT1_0054_F02.b :                                                             
CLNT1_0083_G02.b :                                                             
SKNB1_0065_D10.b :                                                             


20110601C-000333 : ACCTGGACCCAGCTGTGCATGAAGTTCCCTTTCCTGCCAATATTGATATTCGTGACACTG
                   ---------+---------+---------+---------+---------+---------+ 228
CLNT1_0032_E01.b : ACCTGGACCCAGCTGTGCATGAAGTTCCCTTTCCTGCCAATATTGATATTCGTGACACTG
CLNT1_0063_B05.b :                                                             
CLNT1_0016_A08.b :                                                             
CLNT1_0054_F02.b :                                                        ngatt
CLNT1_0083_G02.b :                                                      nnngggt
SKNB1_0065_D10.b :                                                             


20110601C-000333 : TGAAGTATAAAGAAGTCATGAAACAGTATGGACTTGGACCGAACGGCGGCATAGTGACCT
                   ---------+---------+---------+---------+---------+---------+ 288
CLNT1_0032_E01.b : TGAAGTATAAAGAAGTCATGAAACAGTATGGACTTGGACCGAACGGCGGCATAGTGACCT
CLNT1_0063_B05.b :      nnnnccgttagctgacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0016_A08.b :        nntttcgtctgcgncggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0054_F02.b : ttnnnnnnanacgttagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0083_G02.b : acttnnnnnnnacgttagcgnacgagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SKNB1_0065_D10.b :                                                          ngg


20110601C-000333 : CACTCAATCTCTTTGCTAGCCTGGAGCCCCGGCTTCTCAGACAACATGAAGACTCTCCTC
                   ---------+---------+---------+---------+---------+---------+ 348
CLNT1_0032_E01.b : CACTCAATCTCTTTGCTAGCCTGGAGCCCCGGCTTCTCAGACAACATGAAGACTCTCCTC
CLNT1_0063_B05.b : xxxxxxxxxxxxxxxxxxGCCTGGAGCCCCGGCTTCTCAGACAACATGAAGACTCTCCTC
CLNT1_0016_A08.b : xxxxxxxxxxxxxxxxxxGCCTGGAGCCCCGGCTTCTCAGACAACATGAAGACTCTCCTC
CLNT1_0054_F02.b : xxxxxxxxxxxxxxxxxxGCCTGGAGCCCCGGCTTCTCAGACAACATGAAGACTCTCCTC
CLNT1_0083_G02.b : xxxxxxxxxxxccctaacaaCTGGAGCCCCGGCTTCTCAGACAACATGAAGACTCCTTTC
SKNB1_0065_D10.b : ggcctgacgttggctatgcacctggagCCCGGCTTCTCAGACA*CATGAAGACTCTCCTC


20110601C-000333 : GTTCTTGCGCTTCTCCTCCTTTCTGTCTCTGTACAGGCCAAGGTCTATGATCGGTGCGAG
                   ---------+---------+---------+---------+---------+---------+ 408
CLNT1_0032_E01.b : GTTCTTGCGCTTCTCCTCCTTTCTGTCTCTGTACAGGCCAAGGTCTATGATCGGTGCGAG
CLNT1_0063_B05.b : GTTCTTGCGCTTCTCCTCCTTTCTGTCTCTGTACAGGCCAAGGTCTATGATCGGTGCGAG
CLNT1_0016_A08.b : GTTCTTGCGCTTCTCCTCCTTTCTGTCTCTGTACAGGCCAAGGTCTACGATCGGTGCGAG
CLNT1_0054_F02.b : GTTCTTGCGCTTCTCCTCCTTTCTGTCTCTGTACAGGCCAAGGTCTATGATCGGTGCGAG
CLNT1_0083_G02.b : GTTCTTGCGCTTCTCCTCCTTTCTGTCTCTGTACAGGCCAAGGTCTACGATCGGTGCGAG
SKNB1_0065_D10.b : GTTCTTGCGCTTCTCCTCCTTTCTGTCTCTGTACAGGCCAAGGTCTATGATCGGTGCGAG


20110601C-000333 : TTCGCCAGAATTCTGAAAAAGTCTGGCATGGACGGCTATAGGGGAGTCAGCCTGGCGAAC
                   ---------+---------+---------+---------+---------+---------+ 468
CLNT1_0032_E01.b : TTCGCCAGAATTCTGAAAAAGTCTGGCATGGACGGCTATAGGGGAGTCAGCCTGGCGAAC
CLNT1_0063_B05.b : TTCGCCAGAATTCTGAAAAAGTCTGGCATGGACGGCTATAGGGGAGTCAGCCTGGCGAAC
CLNT1_0016_A08.b : TTCGCCAGAATTCTGAAAAAGTCTGGCATGGACGGCTATAGGGGAGTCAGCCTGGCGAAC
CLNT1_0054_F02.b : TTCGCCAGAATTCTGAAAAAGTCTGGCATGGACGGCTATAGGGGAGTCAGCCTGGCGAAC
CLNT1_0083_G02.b : TTCGCCAGAATTCTGAAAAAGTCTGGCATGGACGGCTATAGGGGAGTCAGCCTGGCGAAC
SKNB1_0065_D10.b : TTCGCCAGAATTCTGAAAAAGTCTGGCATGGACGGCTATAGGGGAGTCAGCCTGGCGAAC


20110601C-000333 : TGGGTGTGTTTGGCCAAGTGGGAAAGTGATTTTAACACAAAAGCTATAAACCACAATGTT
                   ---------+---------+---------+---------+---------+---------+ 528
CLNT1_0032_E01.b : TGGGTGTGTTTGGCCAAGTGGGAAAGTGATTTTAACACAAAAGCTATAAACCGCAATGTT
CLNT1_0063_B05.b : TGGGTGTGTTTGGCCAAGTGGGAAAGTGATTTTAACACAAAAGCTATAAACCACAATGTT
CLNT1_0016_A08.b : TGGGTGTGTTTGGCCAAGTGGGAAAGTGATTTTAACACAAAAGCTATAAACCACAATGTT
CLNT1_0054_F02.b : TGGGTGTGTTTGGCCAAGTGGGAAAGTGATTTTAACACAAAAGCTATAAACCACAATGTT
CLNT1_0083_G02.b : TGGGTGTGTTTGGCCAAGTGGGAAAGTGATTTTAACACAAAAGCTATAAACCACAATGTT
SKNB1_0065_D10.b : TGGGTGTGTTTGGCCAAGTGGGAAAGTGATTTTAACACAAAAGCTATAAACCACAATGTT


20110601C-000333 : GGAAGCACTGATTATGGAATATTTCAAATTAATAGCCGCTACTGGTGTAATGATGGCAAG
                   ---------+---------+---------+---------+---------+---------+ 588
CLNT1_0032_E01.b : GGAAGCACTGATTATGGAATATTTCAAATTAATAGCCGCTACTGGTGTAATGATGGCAAG
CLNT1_0063_B05.b : GGAAGCACTGATTATGGAATATTTCAAATTAATAGCCGCTACTGGTGTAATGATGGCAAG
CLNT1_0016_A08.b : GGAAGCACTGATTATGGAATATTTCAAATTAATAGCCGCTACTGGTGTAATGATGGCAAG
CLNT1_0054_F02.b : GGAAGCACTGATTATGGAATATTTCAAATTAATAGCCGCTACTGGTGTAATGATGGCAAG
CLNT1_0083_G02.b : GGAAGCACTGATTATGGAATATTTCAAATTAATAGCCGCTACTGGTGTAATGATGGCAAG
SKNB1_0065_D10.b : GGAAGCACTGATTATGGAATATTTCAAATTAATAGCCGCTACTGGTGTAATGATGGCAAG


20110601C-000333 : ACACCCAAAGCAGTTAATGCCTGTCACATATCCTGCAAAGTTTTGCTGGACGATGACCTC
                   ---------+---------+---------+---------+---------+---------+ 648
CLNT1_0032_E01.b : ACACCCAAAGCAGTTAATGCCTGTCACATATCCTGCAAAGTTTTGCTGGACGATGACCTC
CLNT1_0063_B05.b : ACACCCAAAGCAGTTAATGCCTGTCACATATCCTGCAAAGTTTTGCTGGACGATGACCTC
CLNT1_0016_A08.b : ACACCCAAAGCAGTTAATGCCTGTCACATATCCTGCAAAGTTTTGCTGGACGATGACCTC
CLNT1_0054_F02.b : ACACCCAAAGCAGTTAATGCCTGTCACATATCCTGCAAAGTTTTGCTGGACGATGACCTC
CLNT1_0083_G02.b : ACACCCAAAGCAGTTAATGCCTGTCACATATCCTGCAAAGTTTTGCTGGACGATGACCTC
SKNB1_0065_D10.b : ACACCCAAAGCAGTTAATGCCTGTCACATATCCTGCAAAGTTTTGCTGGACGATGACCTC


20110601C-000333 : AGTCAAGATATAGAATGTGCAAAGAGGGTTGTCAGAGATCCACTAGGCGTTAAAGCATGG
                   ---------+---------+---------+---------+---------+---------+ 708
CLNT1_0032_E01.b : AGTCAAGATATAGAATGTGCAAAGAGGGTTGTCAGAGATCCACAAGGCATTAAAGCATGG
CLNT1_0063_B05.b : AGTCAAGATATAGAATGTGCAAAGAGGGTTGTCAGAGATCCACTAGGCGTTAAAGCATGG
CLNT1_0016_A08.b : AGTCAAGATATAGAATGTGCAAAGAGGGTTGTCAGAGATCCACTAGGCGTTAAAGCATGG
CLNT1_0054_F02.b : AGTCAAGATATAGAATGTGCAAAGAGGGTTGTCAGAGATCCACTAGGCGTTAAAGCATGG
CLNT1_0083_G02.b : AGTCAAGATATAGAATGTGCAAAGAGGGTTGTCAGAGATCCACTAGGCGTTAAAGCATGG
SKNB1_0065_D10.b : AGTCAAGATATAGAATGTGCAAAGAGGGTTGTCAGAGATCCACTAGGCGTTAAAGCATGG


20110601C-000333 : GTGGCATGGAGAGCTCATTGTCAGAACAAAGATGTCTCGCAGTACATTCGGGGTTGCAAA
                   ---------+---------+---------+---------+---------+---------+ 768
CLNT1_0032_E01.b : GTGGCATGGAGAACTCATTGTCAGAACAAAGATGTCTCGCAGTACATTCGGGGTTGCAAA
CLNT1_0063_B05.b : GTGGCATGGAGAGCTCATTGTCAGAACAAAGATGTCTCGCAGTACATTCGGGGTTGCAAA
CLNT1_0016_A08.b : GTGGCATGGAGAGCTCATTGTCAGAACAAAGATGTCTCGCAGTACATTCGGGGTTGCAAA
CLNT1_0054_F02.b : GTGGCATGGAGAGCTCATTGTCAGAACAAAGATGTCTCGCAGTACATTCGGGGTTGCAAA
CLNT1_0083_G02.b : GTGGCATGGAGAGCTCATTGTCAGAACAAAGATGTCTCGCAGTACATTCGGGGTTGCAAA
SKNB1_0065_D10.b : GTGGCATGGAGAGCTCATTGTCAGAACAAAGATGTCTCGCAGTACATTCGGGGTTGCAAA


20110601C-000333 : CTGTAACTGTGCAGTTTTCCTTCTTCAGCTCACCTTGTCTCTTTTTCATATTTAGGAAAT
                   ---------+---------+---------+---------+---------+---------+ 828
CLNT1_0032_E01.b : CTGTAACTGTGCAGTTTTCCTTCTTCAGCTCACCTTGTCTCTTTTTCATATTTGGGAAAT
CLNT1_0063_B05.b : CTGTAACTGTGCAGTTCTCCTTCTTCAGCTCACCCTGTCTCTTTTTCATATTTAGGAAAT
CLNT1_0016_A08.b : CTGTAACTGTGCAGTTTTCCTTCTTCAGCTCACCTTGTCTCTTTTTCATATTTAGGAAAT
CLNT1_0054_F02.b : CTGTAACTGTGCAGTTTTCCTTCTTCAGCTCACCTTGTCTCTTTTTCATATTTAGGAAAT
CLNT1_0083_G02.b : CTGTAACTGTGCAGTTTTCCTTCTTCAGCTCACCTTGTCTCTTTTTCATATTTAGGAAAT
SKNB1_0065_D10.b : CTGTAACTGTGCAGTTTTCCTTCTTCAGCTCACCTTGTCTCTTTTTCATATTTAGGAAAT


20110601C-000333 : AATAGTTGAATGAAAGGTCATACTACCATTCTTGCGAACAAATCATGGTTTTACCGAAGC
                   ---------+---------+---------+---------+---------+---------+ 888
CLNT1_0032_E01.b : AATAGTTGAATGAAAGGTCATACTACCATTCTTGTGAACAAATCATGGTTTTACCGAAGC
CLNT1_0063_B05.b : AATAGTTGAATGAAAGGTCATACTACCATTCTTGCGAACAAATCATGGTTTTACCGAAGC
CLNT1_0016_A08.b : AATAGTTGAATGAAAGGTCATACTGCCATTCTTGCGAACAAATCATGGTTTTACCGAAGC
CLNT1_0054_F02.b : AATAGTTGAATGAAAGGTCATACTACCATTCTTGCGAACAAATCATGGTTTTACCGAAGC
CLNT1_0083_G02.b : AATAGTTGAATGAAAGGTCATACTGCCATTCTTGCGAACAAATCATGGTTTTACCGAAGC
SKNB1_0065_D10.b : AATAGTTGAATGAAAGGTCATACTACCATTCTTGCGAACAAATCATGGTTTTACCGAAGC


20110601C-000333 : AAGAGCATAAGGTCTTTCTTT*AAGAGGCTTAATGTTTACCTAATGTGTTTATTGTTTGT
                   ---------+---------+---------+---------+---------+---------+ 947
CLNT1_0032_E01.b : AAGAGCATAAGGTCTTTCTTTTAAGAGGCTTAATGTTTACCTAAAGGGNTTATGGGTTGG
CLNT1_0063_B05.b : AAGAGCATAAGGTCTTTCTTT*AAGAGGCTTAATGTTTACCTAATGTGTTTATTGTTTGT
CLNT1_0016_A08.b : AAGAGCATAAGGTCTTTCTTT*AAGAGGCTTAATGTTTACCTAATGTGTTTATTGTTTGT
CLNT1_0054_F02.b : AAGAGCATAAGGTCTTTCTTT*AAGAGGCTTAATGTTTACCTAATGTGTTTATTGTTTGT
CLNT1_0083_G02.b : AAGAGCATAAGGTCTTTCTTT*AAGAGGCTTAATGTTTACCTAATGTGTTTATTGTTTGT
SKNB1_0065_D10.b : AAGAGCATAAGGTCTTTCTTT*AAGAGGCTTAATGTTTACCTAATGTGTTTATTGTTTGT


20110601C-000333 : GTTTATTGTTTTATAGGCCTACAATATTTTTCAATTTGCTAAGAGAATTATTGTTGGTCT
                   ---------+---------+---------+---------+---------+---------+ 1007
CLNT1_0032_E01.b : GTTTTATGTTTTATAGGCCTACAATATTTTTCAATTTGCTAAAAAAATTATTGTTGGTCT
CLNT1_0063_B05.b : GTTTATTGTTTTATAGGCCTACAATATTTTTCAATTTGCTAAGAGAATTATTGTTGGTCT
CLNT1_0016_A08.b : GTTTATTGTTTTATAGGCCTACAATATTTTTCAATTTGCTAAGAGAATTATTGTTGGTCT
CLNT1_0054_F02.b : GTTTATTGTTTTATAGGCCTACAATATTTTTCAATTTGCTAAGAGAATTATTGTTGGTCT
CLNT1_0083_G02.b : GTTTATTGTTTTATAGGCCTACAATATTTTTCAATTTGCTAAGAGAATTATTGTTGGTCT
SKNB1_0065_D10.b : GTTTATTGTTTTATAGGCCTACAATATTTTTCAATTTGCTAAGAGAATTATTGTTGGTCT


20110601C-000333 : GAAATCTTAATTATCAAATATACCTCCAGTACATTCAGTTCTTAATCAAAGAAATAAACC
                   ---------+---------+---------+---------+---------+---------+ 1067
CLNT1_0032_E01.b : GAAATCTTTATTATCAAATATACCTTCAGTACATTCAttcttaatcaaagaaatacccca
CLNT1_0063_B05.b : GAAATCTTAATTATCAAATATACCTCCAGTACATTCAGTTCTTAATCAAAGAAATAAACC
CLNT1_0016_A08.b : GAAATCTTAATTATCAAATATACCTCCAGTACATTCAGTTCTTAATCAAAGAAATAAACC
CLNT1_0054_F02.b : GAAATCTTAATTATCAAATATACCTCCAGTACATTCAGTTCTTAATCAAAGAAATAAACC
CLNT1_0083_G02.b : GAAATCTTAATTATCAAATATACCTCCNGTACATTCAGTTCTTAATTCAAGAAATAAACC
SKNB1_0065_D10.b : GAAATCTTAATTATCAAATATACCTCCAGTACATTCAGTTCTTAATCAAAGAAATAAACC


20110601C-000333 : AGAAACAGTCTTCATCTGTTCAGTTATCTCTAAAAACAGTAAAAGATAACCAGTCTTT*G
                   ---------+---------+---------+---------+---------+---------+ 1126
CLNT1_0032_E01.b : aaccgtcttcttctgttcattttctctaaaaacagtaaagataaccaggcttgttgggaa
CLNT1_0063_B05.b : AGAAACAGTCTTCATCTGTTCAGTTATCTCTAAAAACAGTAAAAGATAACCAGTCTTT*G
CLNT1_0016_A08.b : AGAAACAGTCTTCATCTGTTCAGTTATCTCTAAAAACAGTAAAAGATAACCAGTCTTT*G
CLNT1_0054_F02.b : AGAAACAGTCTTCATCTGTTCAGTTATCTCTAAAAACAGTAAAAGATAACCAGTCTTT*G
CLNT1_0083_G02.b : AGAAACAGTCTTCATCTGTTCAGTTATCTCTAAAAACAGTAAAAGATAACCAGTCTTTTG
SKNB1_0065_D10.b : AGAAACAGTCTTCATCTGTTCAGTTATCTCTAAAAACAGTANAAGATAACCAGTCTTT*G


20110601C-000333 : TTGGGTAATATAAAATTTTAAAAGGAGCAGAATGCCAGATGGCTTAAAATGAAGACAACC
                   ---------+---------+---------+---------+---------+---------+ 1186
CLNT1_0032_E01.b : aataaattttaaaggaacaaaatgccaaagggtaaaaggaaaacaccggattaaaaattt
CLNT1_0063_B05.b : TTGGGT*AATATAAAATTTTAAAGGAGCAGAATGCCAGATGGNCTAAAATGAAGACNACC
CLNT1_0016_A08.b : NTGGGTAAATATAAATTTTAAAAAGAGCAGAATGCCAGATGGCTAANAATGAAGACAACC
CLNT1_0054_F02.b : TTGGGGTATATAAAATTTTAAAAGGAGCAGAATGCCAGAATGGCTAAAAATGAGAACACC
CLNT1_0083_G02.b : TTGGGTAATATAAAATTTTAAAAGGAGCAGAATGCCAGATGGCTAAAAATGAAGACAACC
SKNB1_0065_D10.b : TTGGGTAATATAAAATTTTAAAAGGAGCAGAATGCCAGATGGCTAANAATGAAGACNACC


20110601C-000333 : TGAA*TTAAGAATTTTGCTTTCATAAAGTGTGACCTTTGGCTTAAATGTTTTCTCAAAGA
                   ---------+---------+---------+---------+---------+---------+ 1245
CLNT1_0032_E01.b : gcttcaaaagggaacctttggcttagggtttccaaaaaaa                   
CLNT1_0063_B05.b : TGAA*TTNAGAATTTTTGCTTCATAAAGTGTGACCTTTGGCTTAAATGTTTTCcaaagat
CLNT1_0016_A08.b : TGAA*TT*AGAAATTTGCTTTCATAAAGTGTGACCTTTGGCTTAAATGTTTTCTCAAAGA
CLNT1_0054_F02.b : TGNA*TTTAGAATTTTGCTTTCATAAAGTGTGACCTTTGGCTTAAATGTTTTCTCGA*GA
CLNT1_0083_G02.b : TGAAATTAAAAATTTTGCTTTCATAAAGTGGGACCTTGGGGCTAAATGTTTTCTCAGAaa
SKNB1_0065_D10.b : TGAA*TTAAGAATTTTGCTTTCATAAAGTGTGACCTTGGGCTTAAATGGTTTCTCAGAGA


20110601C-000333 : TGATTCGTTCATTTAAACGAATTTTAAAATAGTCTCACATTTAGGTATCCATCTCTTTTA
                   ---------+---------+---------+---------+---------+---------+ 1305
CLNT1_0032_E01.b :                                                             
CLNT1_0063_B05.b : gaatcgttcattaaaacgattttaaatagtctcacatttaggtatcatctctttaacctt
CLNT1_0016_A08.b : TGATTCGNTCATTTAAACGAATTTTAAAatagtctcacattttaggtatccatctctttt
CLNT1_0054_F02.b : TGAATCGTTCATTAAAACGAATTTaaaataatcccaacatttaggttccatctcctttta
CLNT1_0083_G02.b : ataatccttcattaaaaacaattttaaaatagtctcaaaatttaggttacatctcctttt
SKNB1_0065_D10.b : TGATTCGTTCATTTAAACGAATTTTAAAATAGTCTCACATTTAGGTATCCATCTCTTTTA


20110601C-000333 : GCCTTT......................................................
                   ---------+---------+---------+---------+---------+---------+ 1311
CLNT1_0032_E01.b :                                                             
CLNT1_0063_B05.b : taaaactcattaagcttttgctgacttgaggaattaagagggattaatgagcttgctttc
CLNT1_0016_A08.b : accttttaaaaactcattttgcattttgctggacctgaaggaatttaagaagggataaat
CLNT1_0054_F02.b : gccttttaaaaactcctttatgattttgctgaacctgagggaattaaggggggattagat
CLNT1_0083_G02.b : acctttttaaaactcatttaggcttttgcggacctgaaggaattaaaaggggattaaata
SKNB1_0065_D10.b : GCCTTTtaaaactcatttatgcattttgctgaccatgaggaatataaagagggattagat


20110601C-000333 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1311
CLNT1_0032_E01.b :                                                             
CLNT1_0063_B05.b : ctgaacttacacctgaatctgcatagaacaatcaaaggaaagaatcccgggctgaaaatt
CLNT1_0016_A08.b : gaactgggcttccctgaactttacagcttgaatcctgcttaggacaaatccaaggcaatg
CLNT1_0054_F02.b : gactgggcttttccgaacttttcaacctggaatcttggctttttgaccaatttcaaggcg
CLNT1_0083_G02.b : acttgggttttcggaattttacggctgaattcgggcttagaaaaatttcaaggcaatgaa
SKNB1_0065_D10.b : gagctgtgcttttccgaactttatcacctggaatcatgcctatgactaattccaaggcga


20110601C-000333 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1311
CLNT1_0032_E01.b :                                                             
CLNT1_0063_B05.b : gctattacccgggtgaatttcctcggtaaaaacaaccttttttaaaatttggctttcnnn
CLNT1_0016_A08.b : aatccccggctttaaaaattgcaatttaccaggggggattttgcgggcgtaaaagtaaaa
CLNT1_0054_F02.b : aaagaattccggggcttgtaaatattgcaatttaacccaggggtggaatatttcgcgcgg
CLNT1_0083_G02.b : ttccgggtttgaaaatttgtatataccacagggtggattttgcgcggtaaaagaaaactt
SKNB1_0065_D10.b : gaattcccaggcttgaaataatgctaattaccccggggggaattttgcgtgcttaaaata


20110601C-000333 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1311
CLNT1_0032_E01.b :                                                             
CLNT1_0063_B05.b : nnnnnngnnnannnnaaaaaaaaaaannnnnnnnnnnnnnnnnnnngggggagggggtgg
CLNT1_0016_A08.b : ctttctttaaagcttggtttaaannnaaaaannnnnnnnnnnnnnnnnnnnnnnggggct
CLNT1_0054_F02.b : gaaaaaaaccaaattttctctaaaagttttcggtttaaaaaaaaaaaaaagaccagtgtt
CLNT1_0083_G02.b : ttcttaaagcttgctctcnaaaaaaaaaaaannnnnnannnnnnnnnnnnngggcngtgt
SKNB1_0065_D10.b : caacattttctttaaaacttggct                                   


20110601C-000333 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1311
CLNT1_0032_E01.b :                                                             
CLNT1_0063_B05.b : gggggcgcgccaaaaaaaaaacccccccccacaaaagagtgtgttttttttttataaaaa
CLNT1_0016_A08.b : ttttcccatggtgggcgcctaaatataaa                              
CLNT1_0054_F02.b : tcttattggtggcggccccaaataa                                  
CLNT1_0083_G02.b : tttaatggtggggccattatattaaaaaacccccct                       
SKNB1_0065_D10.b :                                                             


20110601C-000333 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1311
CLNT1_0032_E01.b :                                                             
CLNT1_0063_B05.b : aaaaaaaattatcgttt                                          
CLNT1_0016_A08.b :                                                             
CLNT1_0054_F02.b :                                                             
CLNT1_0083_G02.b :                                                             
SKNB1_0065_D10.b :