Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-000419

Sequence: [FASTA format sequence] AGCGAGCGGA GGCCAGAGGG CAGCACTGAC AGCCGCATCA GCATTGCTCC CGGGACTGGA CTCTTCGCGG GGCTGCAGAC CAAGGAAAAT CATTACCATG AGAATTGCAG TGATAGCCTT CTGCCTCTGG GGCTTCGCCT CTGCCCTTCC AGTTAAACAG ACTAATTCTG GCAGCTCGGA GGAAAAGCTG CTTTCCAACA AATACACAGA TGCTGTAGCC ACATTGCTAA AGCCTGACCC ATCTCAGAAG CAGACTTTCC TAGCGCCACA GAATACTATT TCCTCGGAGG AAACGGACGA CTTCAAACAA GAGACCCTGC CAAGCAAGTC CAACGAAAGC CCTGAGCAAA CAGACGATGT GGACGACGAC GACGACGAAG ACCACGTGGA CAGCAGGGAC ACGGACTCCG AGGAAGCTGA TCACGCTGAC GACGCTGACC GATCCGACGA GTCTCATCAC TCCGATGAAT CCGATGAGCT GGTCACCGAT TTCCCCACCG ACACCCCAGC AACCGACGTC ACTCCGGCTG TCCCCACGGG AGACCCCAAT GATGGCCGCG GGGATAGTGT GGTCTATGGA CTGAGGTCAA AATCTAAGAA GTTCCGCAGA TCCGAAGCCC AGCAGCTGGA TGCCACAGAG GAAGACCTCA CGTCACATGT GGAAAGTGAG GAGACGGATG GTACCCCCAA GGCCATCCTC GTTGCCCAGC GCCTGCACGT GGCTTCTGAC TTGGACAGCC AAGAGAAGGA CAGTCAGGAG ACGAGTCAGC CGGATGACCG CAGTGTGGAA ACCCGCAGCC AGGAGCAGTC CAAAGAATAC ACGATCAAGA CCTATGATGG GAGCAATGAG CATTCCAATG TGATTGAGAG TCAGGAAAAT TCCCAAGTCA GCCAAGAATT CACAGCCATG AAGACCAGCT GGTCCCAGAC TCTAAGAGCG AAGAAGACAA ACACCTGAAA CTTCGAGTTT CTCATGAATT AGAGAGTGCG TCTTCTGAGA TCAACTGAAA AAAAATACAT GTCTTACTTT GCCTTTAGTA AAAAAAAAAA AAA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
SPP1 osteopontin isoform a precursor [Homo sapiens]. 147 2e-46 O

SPP1 osteopontin isoform b precursor [Homo sapiens]. 147 2e-46 O

SPP1 osteopontin isoform c precursor [Homo sapiens]. 147 2e-46 O

Locus	Definition	Score	E value	FL
SPP1	osteopontin isoform a precursor [Homo sapiens].	147	2e-46	O
SPP1	osteopontin isoform b precursor [Homo sapiens].	147	2e-46	O
SPP1	osteopontin isoform c precursor [Homo sapiens].	147	2e-46	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Spp1 osteopontin isoform 1 precursor [Mus musculus]. 118 9e-27 O

Spp1 osteopontin isoform 3 precursor [Mus musculus]. 116 3e-26 O

Spp1 osteopontin isoform 2 precursor [Mus musculus]. 115 4e-26 O

Spp1 osteopontin isoform 4 precursor [Mus musculus]. 114 2e-25 O

Spp1 osteopontin isoform 4 precursor [Mus musculus]. 114 2e-25 O

Locus	Definition	Score	E value	FL
Spp1	osteopontin isoform 1 precursor [Mus musculus].	118	9e-27	O
Spp1	osteopontin isoform 3 precursor [Mus musculus].	116	3e-26	O
Spp1	osteopontin isoform 2 precursor [Mus musculus].	115	4e-26	O
Spp1	osteopontin isoform 4 precursor [Mus musculus].	114	2e-25	O
Spp1	osteopontin isoform 4 precursor [Mus musculus].	114	2e-25	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC478471 PREDICTED: similar to secreted phosphoprotein 1 [Canis familiaris]. 120 5e-37 O

		Locus	Definition	Score	E value	FL
		LOC478471	PREDICTED: similar to secreted phosphoprotein 1 [Canis familiaris].	120	5e-37	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
SPP1 osteopontin precursor [Bos taurus]. 138 9e-33 O

		Locus	Definition	Score	E value	FL
		SPP1	osteopontin precursor [Bos taurus].	138	9e-33	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
SPP1 osteopontin precursor [Sus scrofa]. 382 e-121 O

		Locus	Definition	Score	E value	FL
		SPP1	osteopontin precursor [Sus scrofa].	382	e-121	O

Assembly Members: 6 TOP

Library Plate Loc. Read Name Accession Full Seq.

DCI01 0008 A05 DCI01_0008_A05.b DB791040 AK399530
DCI01 0085 F05 DCI01_0085_F05.b DB797128
ITT01 0073 C06 ITT01_0073_C06.b BW982483
ITT01 0078 D07 ITT01_0078_D07.b BW982929
OVR01 0089 B05 OVR01_0089_B05.b BW967285
SKNB1 0046 C07 SKNB1_0046_C07.b

SNPs: 4 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
425 A 2 0 0.333 W N ACT/T
G 4 0 0.667 GCT/A
538 A 2 0 0.333 W S ACA/T
G 4 0 0.667 ACG/T
559 A 2 0 0.333 W S CGA/R
C 4 0 0.667 CGC/R
573 C 2 0 0.333 W N GCC/A
T 4 0 0.667 GTC/V

Alignment: TOP

20110601C-000419 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
DCI01_0008_A05.b : acctttagagatacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0085_F05.b :  aaaaanccgatactaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0078_D07.b :                                                             
ITT01_0073_C06.b :                                                             
OVR01_0089_B05.b :                                                             
SKNB1_0046_C07.b :                                                             


20110601C-000419 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
DCI01_0008_A05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0085_F05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0078_D07.b :                                               nnnnggagtaacax
ITT01_0073_C06.b :                                                 nnggatgaacax
OVR01_0089_B05.b :                          nnggcttgtgacttaacxxxxxxxxxxxxxxxxxx
SKNB1_0046_C07.b :                                                             


20110601C-000419 : ...........................................AGCGAGCGGAGGCCAGA
                   ---------+---------+---------+---------+---------+---------+ 17
DCI01_0008_A05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGCGAGCGGAGGCCAGA
DCI01_0085_F05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGCGAGCGGAGGCCACA
ITT01_0078_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCGAGCGGAGGCCAGA
ITT01_0073_C06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCGAGCGGAGGCCAGA
OVR01_0089_B05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCGAGCGGAGGCCAGA
SKNB1_0046_C07.b :                         nnnnnctaacttttcctctggagcggcggaggCAGA


20110601C-000419 : GGGCAGCACTGACAGCCGCATCAGCATTGCTCCCGGGACTGGACTCTTCGCGGGGCTGCA
                   ---------+---------+---------+---------+---------+---------+ 77
DCI01_0008_A05.b : GGGCAGCACTGACAGCCGCATCAGCATTGCTCCCGGGACTGGACTCTTCGCGGGGCTGCA
DCI01_0085_F05.b : GGGCAGCACTGACAGCCGCATCAGCATTGCTCCCGGGACTGGACTCTTCGCGGGGCTGCA
ITT01_0078_D07.b : GGGCAGCACTGACAGCCGCATCAGCATTGCTCCCGGGACTGGACTCTTCGCGGGGCTGCA
ITT01_0073_C06.b : GGGCAGCACTGACAGCCGCATCAGCATTGCTCCCGGGACTGGACTCTTCGCGGGGCTGCA
OVR01_0089_B05.b : GGGCAGCACTGACAGCCGCATCAGCATCGCTCCCGGGACTGGACTCTTCGCGGGGCTGCA
SKNB1_0046_C07.b : GGGCAGCACTGACAGCCGCATCAGCATTGCTCCCGGGACTGGACTCTTCGCGGGGCTGCA


20110601C-000419 : GACCAAGGAAAATCATTACCATGAGAATTGCAGTGATAGCCTTCTGCCTCTGGGGCTTCG
                   ---------+---------+---------+---------+---------+---------+ 137
DCI01_0008_A05.b : GACCAAGGAAAATCATTACCATGAGAATTGCAGTGATAGCCTTCTGCCTCTGGGGCTTCG
DCI01_0085_F05.b : GACCAAGGAAAATCATTACCATGAGAATTGCACTGATAGCCTTCTGCCTCTGGGGCTTCG
ITT01_0078_D07.b : GACCAAGGAAAATCATTACCATGAGAATTGCAGTGATAGCCTTCTGCCTCTGGGGCTTCG
ITT01_0073_C06.b : GACCAAGGAAAATCATTACCATGAGAATTGCAGTGATAGCCTTCTGCCTCTGGGGCTTCG
OVR01_0089_B05.b : GACCAAGGAAAATCATTACCATGAGAATTGCAGTGATAGCCTTCTGCCTCTGGGGCTTCG
SKNB1_0046_C07.b : GACCAAGGAAAATCATTACCATGAGAATTGCAGTGATAGCCTTCTGCCTCTGGGGCTTCG


20110601C-000419 : CCTCTGCCCTTCCAGTTAAACAGACTAATTCTGGCAGCTCGGAGGAAAAGCTGCTTTCCA
                   ---------+---------+---------+---------+---------+---------+ 197
DCI01_0008_A05.b : CCTCTGCCCCTCCAGTTAAACAGACTAATTCTGGCAGCTCGGAGGAAAAGCTGCTTTCCA
DCI01_0085_F05.b : CCTCTGCCCTTCCAGTTAAACAGACTAATTCTGGCAGCTCGGAGGAAAAGCTGCTTTCCA
ITT01_0078_D07.b : CCTCTGCCCTTCCAGTTAAACAGACTAATTCTGGCAGCTCGGAGGAAAAGCTGCTTTCCA
ITT01_0073_C06.b : CCTCTGCCCTTCCAGTTAAACAGACTAATTCTGGCAGCTCGGAGGAAAAGCTGCTTTCCA
OVR01_0089_B05.b : CCTCTGCCCTTCCAGTTAAACAGACTAATTCTGGCAGCTCGGAGGAAAAGCTGCTTTCCA
SKNB1_0046_C07.b : CCTCTGCCCTTCCAGTTAAACAGACTAATTCTGGCAGCTCGGAGGAAAAGCTGCTTTCCA


20110601C-000419 : ACAAATACACAGATGCTGTAGCCACATTGCTAAAGCCTGACCCATCTCAGAAGCAGACTT
                   ---------+---------+---------+---------+---------+---------+ 257
DCI01_0008_A05.b : ACAAATACACAGATGCTGTAGCCACATTGCTAAAGCCTGACCCATCTCAGAAGCAGACTT
DCI01_0085_F05.b : ACAAATACACAGATGCTGTAGCCACATTGCTAAAGCCTGACCCATCTCAAAAACAGACTT
ITT01_0078_D07.b : ACAAATACACAGATGCTGTAGCCACATTGCTAAAGCCTGACCCATCTCAGAAGCAGACTT
ITT01_0073_C06.b : ACAAATACACAGATGCTGTAGCCACATTGCTAAAGCCTGACCCATCTCAGAAGCAGACTT
OVR01_0089_B05.b : ACAAATACACAGATGCTGTAGCCACATTGCTAAAGCCTGACCCATCTCAGAAGCAGACTT
SKNB1_0046_C07.b : ACAAATACACAGATGCTGTAGCCACATTGCTAAAGCCTGACCCATCTCAGAAGCAGACTT


20110601C-000419 : TCCTAGCGCCACAGAATACTATTTCCTCGGAGGAAACGGACGACTTCAAACAAGAGACCC
                   ---------+---------+---------+---------+---------+---------+ 317
DCI01_0008_A05.b : TCCTAGCGCCACAGAATACTATTTCCTCGGAGGAAACGGACGACTTCAAACAAGAGACCC
DCI01_0085_F05.b : TCCTAGCGCCACAGAATACTATTTCCTCGGAGGAAACGGACGACTTCAAACAAGAGACCC
ITT01_0078_D07.b : TCCTAGCGCCACAGAATACTATTTCCTCGGAGGAAACGGACGACTTCAAACAAGAGACCC
ITT01_0073_C06.b : TCCTAGCGCCACAGAATACTATTTCCTCGGAGGAAACGGACGACTTCAAACAAGAGACCC
OVR01_0089_B05.b : TCCTAGCGCCACAGAATACTATTTCCTCGGAGGAAACGGACGACTTCAAACAAGAGACCC
SKNB1_0046_C07.b : TCCTAGCGCCACAGAATACTATTTCCTCGGAGGAAACGGACGACTTCAAACAAGAGACCC


20110601C-000419 : TGCCAAGCAAGTCCAACGAAAGCCCTGAGCAAACAGACGATGTGGACGACGACGACGACG
                   ---------+---------+---------+---------+---------+---------+ 377
DCI01_0008_A05.b : TGCCAAGCAAGTCCAACGAAAGCCCTGAGCAAACAgacgatgtggacgacgacgacgacg
DCI01_0085_F05.b : TGCCAAGCAAGTCCAACGAAAGCCCTGAGCAAACAgacgatgtggacgacgacgacgacg
ITT01_0078_D07.b : TGCCAAGCAAGTCCAACGAAAGCCCTGAGCAAACAgacgatgtggacgacgacgacgacg
ITT01_0073_C06.b : TGCCAAGCAAGTCCAACGAAAGCCCTGAGCAAACAgacgatgtggacgacgacgacgacg
OVR01_0089_B05.b : TGCCAAGCAAGTCCAACGAAAGCCCTGAGCAAACAgacgatgtggacgacgacgacgacg
SKNB1_0046_C07.b : TGCCAAGCAAGTCCAACGAAAGCCCTGAGCAAACAgacgatgtggacgacgacgacgacg


20110601C-000419 : AAGACCACGTGGACAGCAGGGACACGGACTCCGAGGAAGCTGATCACGCTGACGACGCTG
                   ---------+---------+---------+---------+---------+---------+ 437
DCI01_0008_A05.b : aagaccacgtggacagcagggacacggactccgaggaagctgatcacgctgacgacgctg
DCI01_0085_F05.b : aagaccacgtggacagcagggacacggactccgaggaagctgatcacgctgacgacgctg
ITT01_0078_D07.b : aagaccacgtggacagcagggacacggactccgaggaagctgatcacgctgacgacgctg
ITT01_0073_C06.b : aagaccacgtggacagcagggacacggactccgaggaagctgatcacgctgacgacgctg
OVR01_0089_B05.b : aagaccacgtggacagcagggacacggactccgaggaagctgatcacactgacgacgctg
SKNB1_0046_C07.b : aagaccacgtggacagcagggacgcggactccgaggaagctgatcacactgatgacgctg


20110601C-000419 : ACCGATCCGACGAGTCTCATCACTCCGATGAATCCGATGAGCTGGTCACCGATTTCCCCA
                   ---------+---------+---------+---------+---------+---------+ 497
DCI01_0008_A05.b : acCGATCCGACGAGTCTCATCACTCCGATGAATCCGATGAGCTGGTCACCGATTTCCCCA
DCI01_0085_F05.b : acCGATCCGACGAGTCTCATCACTCCGATGAATCCGATGAGCTGGTCACCGATTTCCCCA
ITT01_0078_D07.b : acCGATCCGACGAGTCTCATCACTCCGATGAATCCGATGAGCTGGTCGCCGATTTCCCCA
ITT01_0073_C06.b : acCGATCCGACGAGTCTCATCACTCCGATGAATCCGATGAGCTGGTCACCGATTTCCCCA
OVR01_0089_B05.b : acCGATCCGACGAGTCTCATCACTCCGATGAATCCGATGAGCTGGTCACCGATTTCCCCA
SKNB1_0046_C07.b : acCGATCCGACGAGTCTCATCACTCCGATGAATCCGATGAGCTGGTCACCGATTTCCCCA


20110601C-000419 : CCGACACCCCAGCAACCGACGTCACTCCGGCTGTCCCCACGGGAGACCCCAATGATGGCC
                   ---------+---------+---------+---------+---------+---------+ 557
DCI01_0008_A05.b : CCGACACCCCAGCAACCGACGTCACTCCGGCTGTCCCCACGGGAGACCCCAATGATGGCC
DCI01_0085_F05.b : CCGACACCCCAGCAACCGACGTCACTCCGGCTGTCCCCACGGGAGACCCCAATGATGGCC
ITT01_0078_D07.b : CCGACACCCCAGCAACCGACGTCACTCCGGCTGTCCCCACGGGAGACCCCAATGATGGCC
ITT01_0073_C06.b : CCGACACCCCAGCAACCGACGTCACTCCGGCTGTCCCCACGGGAGACCCCAATGATGGCC
OVR01_0089_B05.b : CCGACACCCCAGCAACCGACGTCACTCCGGCTGTCCCCACAGGAGACCCCAATGATGGCC
SKNB1_0046_C07.b : CCGACACCCCAGCAACCGACGTCACTCCGGCTGTCCCCACAGGAGACCCCAATGATGGCC


20110601C-000419 : GCGGGGATAGTGTGGTCTATGGACTGAGGTCAAAATCTAAGAAGTTCCGCAGATCCGAAG
                   ---------+---------+---------+---------+---------+---------+ 617
DCI01_0008_A05.b : GCGGGGATAGTGTGGTCTATGGACTGAGGTCAAAATCTAAGAAGTTCCGCAGATCCGAAG
DCI01_0085_F05.b : GCGGGGATAGTGTGGTCTATGGACTGAGGTCAAAATCTAAGAAGTTCCGCAGATCCGAAG
ITT01_0078_D07.b : GCGGGGATAGTGTGGTCTATGGACTGAGGTCAAAATCTAAGAAGTTCCGCAGATCCGAAG
ITT01_0073_C06.b : GCGGGGATAGTGTGGTCTATGGACTGAGGTCAAAATCTAAGAAGTTCCGCAGATCCGAAG
OVR01_0089_B05.b : GAGGGGATAGTGTGGCGTATGGACTGAGGTCAAAATCTAAGAAGTTCCGCAGATCCGAAG
SKNB1_0046_C07.b : GAGGGGATAGTGTGGCGTATGGACTGAGGTCAAAATCTAAGAAGTTCCGCAGATCCGAAG


20110601C-000419 : CCCAGCAGCTGGATGCCACAGAGGAAGACCTCACGTCACATGTGGAAAGTGAGGAGACGG
                   ---------+---------+---------+---------+---------+---------+ 677
DCI01_0008_A05.b : CCCAGCAGCTGGATGCCACAGAGGAAGACCTCACGTCACATGTGGAAAGTGAGGAGACGG
DCI01_0085_F05.b : CCCAGCAGCTGGATGCCACAGAGGAAGACCTCACGTCACATGTGGAAAGTGAGGAGACGG
ITT01_0078_D07.b : CCCAGCAGCTGGATGCCACAGAGGAAGACCTCACGTCACATGTGGAAAGTGAGGAGACGG
ITT01_0073_C06.b : CCCAGCAGCTGGATGCCACAGAGGAAGACCTCACGTCACATGTGGAAAGTGAGGAGACGG
OVR01_0089_B05.b : CCCAGCAGCTGGATGCCACAGAGGAAGACCTCACGTCACATGTGGAAAGTGAGGAGGCGG
SKNB1_0046_C07.b : CCCAGCAGCTGGATGCCACAGAGGAAGACCTCACGTCACATGTGGAAAGTGAGGAGACGG


20110601C-000419 : ATGGTACCCCCAAGGCCATCCTCGTTGCCCAGCGCCTGCACGTGGCTTCTGACTTGGACA
                   ---------+---------+---------+---------+---------+---------+ 737
DCI01_0008_A05.b : ATGGTACC*CCAAGGCCATCCTCGTTTGCCAGCGCCTGCACGTGGCTTCTGACTTGGACA
DCI01_0085_F05.b : ATGGTACCTCCTAAGCCATCCTCGTTGCCCAGCGCCTGCACGTGGCTTCTGACTTGGACA
ITT01_0078_D07.b : ATGGTACCCCCAAGGCCATCCTCGTTGCCCAGCGTCTGCACGTGGCTTCTGACTTGGACA
ITT01_0073_C06.b : ATGGTACCCCCAAGGCCATCCTCGTTGCCCAGCGCCTGCACGTGGCTTCTGACTTGGACA
OVR01_0089_B05.b : ATGGTACCCCCAAGGCCATCCTTGTTGCCCAGCGCCTGCACGTGGCTTCTGACTTGGACA
SKNB1_0046_C07.b : ATGGTACCCCCAAGGCCATCCTCGTTGCCCAGCGCCTGCACGTGGCTTCTGACTTGGACA


20110601C-000419 : GCCAAGAGAAGGACAGTCAGGAGACGAGTCAGCCGGATGACCGCAGTGTGGAAACCCGCA
                   ---------+---------+---------+---------+---------+---------+ 797
DCI01_0008_A05.b : GCCAAGAGAAAGACAGTCAGGAGACGAGTCAGCCGGATGACCGCAGTGTGGAAACCCGCA
DCI01_0085_F05.b : GCCTAGAGAAGGACAGTCACGAGACGAGTCAGCCGGATGACCGCAGTGTGNAAACCCGCA
ITT01_0078_D07.b : GCCAAGAGAAGGACAGTCAGGAGACGAGTCAGCCGGATGACCGCAGTGTGGAAACCCGCA
ITT01_0073_C06.b : GCCAAGAGAAGGACAGTCAGGAGACGAGTCAGCCGGATGACCGCAGTGTGGAAACCCGCA
OVR01_0089_B05.b : GCCAAGAGAAGGACAGTCAGGAGACGAGTCAGCCGGATGACCGCAGTGTGGAAACCCGCA
SKNB1_0046_C07.b : GCCAAGAGAAGGACAGTCAGGAGACGAGTCAGCCGGATGACCGCAGTGTGGAAACCCGCA


20110601C-000419 : GCCAGGAGCAGTCCAAAGAATACACGATCAAGACCTATGATGGGAGCAATGAGCATTCCA
                   ---------+---------+---------+---------+---------+---------+ 857
DCI01_0008_A05.b : CCC*GGAGCAGTCCCAAGA*TACACGATC*AGACCTATGATGGGAGCAATGACCATTCGA
DCI01_0085_F05.b : GCCAGGAGCAGTCCTAAGA*TACACGATCCAGACCTATGATGGGAGTCATGAGCATTCCA
ITT01_0078_D07.b : GCCAGGAGCAGTCCAAAGAATACACGATCAAGACCTATGATGGGAGCAATGAGCATTCCA
ITT01_0073_C06.b : GCCAGGAGCAGTCCAAAGA*TACACGATCAAGACCTATGATGGGAGCAATGAGCATTCCA
OVR01_0089_B05.b : GCCAGGAGCAGTCCAAAGAATACACGAATCAGACCTATGATGGGAGCAATAAGCATTCCA
SKNB1_0046_C07.b : GCCAGGAGCAGTCCAAAGAATACACGATCAAGACCTATGATGGGAGCAATGAGCATTCCA


20110601C-000419 : ATGTGATTGAGAGTCAGGAAAATTCCCAAGTCAGCCAAGAATTCACAGCCATGAAGACCA
                   ---------+---------+---------+---------+---------+---------+ 917
DCI01_0008_A05.b : *TGTGATTGAAAGTCAAGAAAA*TCCCAAGTCAACCAAGAATTCACAGCCATGgaaacag
DCI01_0085_F05.b : *TGCTGATGAGAGTCAGGAAAA*TCCCAAGTCAGCCAAGAATTCACAGCCATGAgacagc
ITT01_0078_D07.b : ATGTGNATGAGAGTCAGGAAAAATCCAAAGTCAGCCAAGAATTCACAGCCATGAAGAACA
ITT01_0073_C06.b : ATGTGATTGAGAGTCAGGAAAA*TCCCAAGTCAGCCAAGAATTCACAGCCCTGAAGA*CA
OVR01_0089_B05.b : ATGTGATTGAGAGTCAGGAAAATTTCAAAGTCAGCCCAGAATTCCCAGCCCTGAAGACAA
SKNB1_0046_C07.b : ATGTGATTGAGAGTCANGAAAATTCCAAAGTCAGCCAAGAATTCACAGCCGTGAAGACNA


20110601C-000419 : GCTGGTCCCAGACTCTAAGAGCGAAGAAGACAAACACCTGAAACTTCGAGTTTCTCATGA
                   ---------+---------+---------+---------+---------+---------+ 977
DCI01_0008_A05.b : ctggtcccagatcttagagcgaagagacaacccttgaacttccagttctcagaattaaga
DCI01_0085_F05.b : tggtcccgactctagaccgaagatacaacactggaatctcagtttctcagaatagagaag
ITT01_0078_D07.b : GCTGGGTCCAGACTCTAAGAGCGAAGAAGA*AAACACCTNGAACTTTCGAGTTCTCATGA
ITT01_0073_C06.b : GCTGGTCCCAGACTCTAAGAGCGAAGAAGACAAACACCTGAAACTTCGAGTTTCTCATGA
OVR01_0089_B05.b : GCTGGTCCCCGACTCCTAGAGCGAAGAAAAACAACCCCTGAAACTTCGAGTTTCTCATGA
SKNB1_0046_C07.b : GCTGGTCCCAGACTCTAAGAGCGAAGAAGAC*AACACCTGAAACTTCGAGTTTCTCATGA


20110601C-000419 : ATTAGAGAGTGCGTCTTCTGAGATCAACTGAAAAAAAATACATG*TCTTACTTTGCCTTT
                   ---------+---------+---------+---------+---------+---------+ 1036
DCI01_0008_A05.b : gggctcctccgaaacaacggaaagaatacatgtcttacttggctttaaaaaagaaaaaaa
DCI01_0085_F05.b : cgtctctggatcactgaaaaaaaaaagtctacttggtttaagaaagaaaaaaaccttgaa
ITT01_0078_D07.b : ATTAGAGAGTGCGTCTTCTGAGATNCACTGAGAGAANNTACATG*TCTTACTTTNGCTTT
ITT01_0073_C06.b : AATAGAGAGTGCGTCTTCTGAGATCAACTGAAAAAATACA*ATG*TCTTACTTTGCCTTT
OVR01_0089_B05.b : ATTAAAAAGTGCGTCTTCTGAGATCAACTGAAGAAAAATACAGGGTCTTACTTGCCTTTT
SKNB1_0046_C07.b : AATANAGAGTGCGTCTTCTGAGATCActgagagaatacagtgtcttactttgcnttttag


20110601C-000419 : AGTAAAAAAAAAAAAAA...........................................
                   ---------+---------+---------+---------+---------+---------+ 1053
DCI01_0008_A05.b : aacctggtggggggagggaaaaaggaaagcttttctccccttaatgggaaggtaagtggg
DCI01_0085_F05.b : cggggggaaaaataaaagctatttcccctattgggagtaattgtggccgggaacaaaaat
ITT01_0078_D07.b : AGTAAAAAaaaaaaaaaaggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0073_C06.b : AGTAAAAGAAAAAAAAcaattgtagcgaggtgggaaaaatatgaaaggcttattccacct
OVR01_0089_B05.b : AGTAAAAAAAAAAAAAAaatacctggaaccgaggggggaaaaaaattaaaaggcttattt
SKNB1_0046_C07.b : taaagaaaaaaatacattgtagcgagggggagaaaatatgaaagcttattccanctaant


20110601C-000419 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1053
DCI01_0008_A05.b : gcgccaaaaaaaaaaatttttaacttggtgtgggtgggtcccggcacccctgcacaaagg
DCI01_0085_F05.b : ttacttattaggggggccgggacccgtcccaaaactggttttcaggctctcaaaaacccc
ITT01_0078_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0073_C06.b : tattggggatgtatagtggggggcttggaaaaaaaaaattttgatcatagttaggggggg
OVR01_0089_B05.b : ccccccttattgggaaaggtaatttggggtgcccctggaaacaaaaaaaatttgaacata
SKNB1_0046_C07.b : ggggaaagggaaatgggggggctcttgaacaataaaattttgatccttaattaagggaag


20110601C-000419 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1053
DCI01_0008_A05.b : tttgggttgtctccggcttccaaaaacacaaaccgccggttgtgggtgtctgcttcttta
DCI01_0085_F05.b : ccctttagtggccctttaaaatttgacccaacgcccttagggatatctccctttt    
ITT01_0078_D07.b : xxxaacatagcctggccgccttttaacgcctgacaggaaacgccacctgggactttgaag
ITT01_0073_C06.b : gtcaggaaacccctgtcactaaacttcgggttattcaagttttcctataaaatacaaccc
OVR01_0089_B05.b : aaattaggggggg                                              
SKNB1_0046_C07.b : ctcccgggaaaaccctgtcacaaaaaactcgggggttaaccca                


20110601C-000419 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1053
DCI01_0008_A05.b : tagatgtgagagacaccaccccccccaaaagaacacccgcccgccccttgttaataggat
DCI01_0085_F05.b :                                                             
ITT01_0078_D07.b : gaacttccttgggggggcaattgcaaacaccccaaatttagcccaggaaataaattttag
ITT01_0073_C06.b : cccgaatgaaggtgcctcctttgaagaatttgggagcacaaaccgccccttaaaaaggaa
OVR01_0089_B05.b :                                                             
SKNB1_0046_C07.b :                                                             


20110601C-000419 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1053
DCI01_0008_A05.b : tggagtgtgagagtgaacaaaa                                     
DCI01_0085_F05.b :                                                             
ITT01_0078_D07.b : gtaaggggcacaacccccctcggccgaaatttctcggaatattaaaattccgccgggttt
ITT01_0073_C06.b : aaatcggcccgactttgttttaaaggaattgggaattttggggaaaacaccggaaaaaaa
OVR01_0089_B05.b :                                                             
SKNB1_0046_C07.b :                                                             


20110601C-000419 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1053
DCI01_0008_A05.b :                                                             
DCI01_0085_F05.b :                                                             
ITT01_0078_D07.b : tttgtgttttatcacccgttttggcccccacggtgtgaaacaacctaggtttttaacacc
ITT01_0073_C06.b : aaaaaagggtgttggtggggcgcttattccgggacctaccccttgtgagccagattaaag
OVR01_0089_B05.b :                                                             
SKNB1_0046_C07.b :                                                             


20110601C-000419 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1053
DCI01_0008_A05.b :                                                             
DCI01_0085_F05.b :                                                             
ITT01_0078_D07.b : ccccc                                                      
ITT01_0073_C06.b :                                                            
OVR01_0089_B05.b :                                                             
SKNB1_0046_C07.b :