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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-000661

Length: 1,152

Sequence:  [FASTA format sequence]
GATTCATTTT CAAAGTAAAC GTTTAAGAGC CGAGGCATTC CTATCCTCTT CTAAGGCGTT
ATTCCTGGAG GCTCATTCAC CGCCAGCACC TCCGCTGCCT GCAGGCATTG CTGTCACCGT
CACCGTGACG GCGCGCACGA TTTTCAGTTG GCCCGCTTCC CCTCGTGATT AGGACAGACG
CGGGCACTCT GGCCCAGCCG TCTTGGCTCA GTATCTGCAG GCGTCCGTCT CGGGACGGAG
CTCAGGGGAA GAGCGTGACT CCAGTTGAAC GTGATAGTCG GTGCGTTGAG AGGAGACCCA
GTCGGGTGTC GAGTCAGAAG GGGCCCGGGG CCCGAGGCCC TGGGCAGGAC GGCCCGTGCC
CTGCATCACG GGCCCAGCGT CCTAGAGGCA GGACTCTGGT GGAGAGTGTG AGGGTGCCTG
GGGCCCCTCC GGAGCTGGGG CCGTGCGGTG CAGGTTGGGC TCTCGGCGCG GTGTTGGCTG
TTTCTGCGGG ATTTGGAGGA ATTCTTCCAG TGATGGGAGT CGCCAGTGAC CGGGCACCAG
GCTGAGAGCC AGTCTGCCCC GAATCTCTTC CCCCTCGTCT CCTGCGTCAG CCCCCCGTCC
GATGAGAGCC TGGTGGCCCT GGGCTGCCTG GCCCGGGACT TCCTGCCCAG CTCCGTCACC
TTCTCCTGGA ACTACAAGAA CAGCAGCAAG GTCAGCAGCC AGAACATCCA GGACTTCCCG
TCCGTCCTGA GAGGCGGCAA GTACTTGGCC TCCTCCCGGG TGCTCCTACC CTCTGTGAGC
ATCCCCCAGG ACCCAGAGGC CTTCCTGGTG TGCGAGGTCC AGCACCCCAG TGGCACCAAG
TCCGTGTCCA TCTCTGGGCC AGTCGTAGAG GAGCAGCCCC CCGTCTTGAA CATCTTCGTC
CCCACCCGGG AGTCCTTCTC CAGTACTCCC CAGCGCACGT CCAAGCTCAT CTGCCAGGCC
TCAGACTTCA GCCCCAAGCA GATCTCCATG GCCTGGTTCC GTGATGGGAA ACGGGTGGTG
TCTGGCGTCA GCACAGGCCC CGTGGAAACC CTACAGTCCA GGTCCGGTGA CCTACAGGCT
CCACAGCATG CTGACCGTCA CGGAGTCCGA GTGGCTCAGC CAGAGCGTCT TTCACTGCCC
AGTGGAGCAC AA

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Igh-VJ558	PREDICTED: ig alpha chain C region [Mus musculus].	55.8	6e-08	O
		Igh-VJ558	PREDICTED: ig alpha chain C region isoform 1 [Mus musculus].	53.5	3e-07	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC480788	PREDICTED: similar to T-cell receptor beta chain C region isoform 5 [Canis familiaris].	53.1	5e-07	O
		LOC480788	PREDICTED: similar to T-cell receptor beta chain C region isoform 23 [Canis familiaris].	52.8	6e-07	O
		LOC480788	PREDICTED: similar to T-cell receptor beta chain C region isoform 16 [Canis familiaris].	50.8	2e-06	O
		LOC480788	PREDICTED: similar to T-cell receptor beta chain C region isoform 15 [Canis familiaris].	50.8	2e-06	O
		LOC477182	PREDICTED: similar to Tyrosine-protein phosphatase non-receptor type substrate 1 precursor (SHP substrate-1) (SHPS-1) (Inhibitory receptor SHPS-1) (Signal-regulatory protein alpha-1) (Sirp-alpha-1) (Sirp-alpha-2) (Sirp-alpha-3) (MyD-1 antigen) (Brain Ig-like ... [Canis familiaris].	50.1	2e-06	O
		LOC480788	PREDICTED: similar to T-cell receptor beta chain C region isoform 6 [Canis familiaris].	50.1	4e-06	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		LOC524810	hypothetical protein LOC524810 [Bos taurus].	59.7	5e-09	O

BLAST on RefSeq (Pig):      TOP