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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-000760

Length: 1,178

Sequence:  [FASTA format sequence]
ACATAGGCCG TCTTCAGCCG CAGCATCGAG TCGGCCGTCT TCAGCCGCAG CATCGAGTCG
GCCTTGTTGG CCTACTGATC ATTGCTCTAC AACTCCGAAG AGCAAGAGCT GAGACCACCT
TGAGAAGAGC ATGGTCCCAG GCCGAGTTCT GATGTGGGGG GCCCTCGCCC TGACCACCGT
GATGAGCGCC TGTGGAGGTG AAGACATTGC GGCCGACCAT GTTGCCTCCT ATGGCTTAAA
TGTCTACCAG TCTTACGGTC CCAGCGGCTA TTTTACCCAT GAATTTGATG GCGACGAGGA
ATTCTACGTG GACCTGGAGA AGAAGGAGAC TGTCTGGCGG CTGCCTCTGT TTAGTGAATT
TACAAGTTTT GACCCGCAGG GTGCACTGAG GAATATAGCT ACGTTAAAAC ATAACTTGAA
CATCGTGACT AAACGCTCCA ACAACACCGC GGCTGTCAAT CAGGTTCCTG AGGTGACTGT
GTTTTCCAAG TCTCCAGTGA TACTGGGTCA GCCCAACACC CTCATCTGTC ATGTGGACAG
CATCTTTCCT CCTGTGATCA ACATCACGTG GTTGAAGAAC GGGCACTCTG TCAAAGGTTT
TTCTGAGACC AGCTTCCTCT CCAAAAATGA TCATTCCTTC CTCAAGATCA GTTATCTCAC
CTTCCTCCCT TCTGATGATG ATTTTTATGA CTGCAAAGTG GAGCACTGGG GCCTGGATAA
GCCACTTCTG AAACACTGGG AACCTGAGAT TCCAGCCCCC ATGTCAGAGC TGACAGAGAC
TGTGGTCTGC GCCCTGGGAT TGATCGTGGG CCTTGTGGGC ATCGTGGTGG GCACTGTCTT
CATCATTCAA GGCCTGCGCT CAGGTGGTCC CTCTAGACAC CAAGGGTCCT TGTGAGTCAC
ACTCCAGAAG GGAAGGAGCA CTGCCCGCCT ACAAGAGCTG AAGAGTGGAT GTGCTCAACG
ACCTAGAACT ATTTTCTGGC CCAATTCATC ATATACCTTC TCTCTTCCTA CATTCTTCTT
CTCACCTCTT CTCTGGAACT TAAGGTGCTG TGTCATCTCA GAATTCATAT GCCCTTGGGA
TCCTTTTTCC GACCTTCTAG GTCTTTTTCT TTTCTCAGTG GTACCTTGTT ATGGGATCTC
TGAAAATCCC ACTCCGCTAC CTGATCCCTC AGTGACCC

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		LOC100507718	PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 2 [Homo sapiens].	385	e-107	O
		LOC100507718	PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 1 [Homo sapiens].	385	e-107	O
		LOC100509457	PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 1 [Homo sapiens].	379	e-105	O
		LOC100509457	PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 3 [Homo sapiens].	379	e-105	O
		HLA-DQA1	HLA class II histocompatibility antigen, DQ alpha 1 chain precursor [Homo sapiens].	372	e-103	O
		LOC100507718	PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 3 [Homo sapiens].	371	e-103	O
		HLA-DQA2	HLA class II histocompatibility antigen, DQ alpha 2 chain precursor [Homo sapiens].	370	e-102	O
		LOC100509457	PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 2 [Homo sapiens].	365	e-101	O
		LOC100507718	PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 4 [Homo sapiens].	347	1e-95	O
		LOC100509457	PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 4 [Homo sapiens].	339	3e-93	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		H2-Aa	histocompatibility 2, class II antigen A, alpha precursor [Mus musculus].	333	2e-91	O
		H2-Oa	histocompatibility 2, O region alpha locus [Mus musculus].	228	9e-60	O
		H2-Ea-ps	histocompatibility 2, class II antigen E alpha precursor [Mus musculus].	214	8e-56	O
		H2-DMa	class II histocompatibility antigen, M alpha chain precursor [Mus musculus].	81.6	1e-15	O
		B2m	beta-2-microglobulin precursor [Mus musculus].	70.1	3e-12	O
		H2-DMb1	class II histocompatibility antigen, M beta 1 chain precursor [Mus musculus].	64.7	1e-10	O
		H2-DMb2	histocompatibility 2, class II, locus Mb2 [Mus musculus].	64.7	1e-10	O
		H2-Ob	histocompatibility 2, O region beta locus [Mus musculus].	64.3	2e-10	O
		LOC100505003	PREDICTED: class II histocompatibility antigen, M beta 1 chain-like [Mus musculus].	64.3	2e-10	O
		H2-Eb1	H-2 class II histocompatibility antigen, I-E beta chain precursor [Mus musculus].	58.2	1e-08	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		HLA-DQA1	major histocompatibility complex, class II, DQ alpha [Canis lupus familiaris].	380	e-105	O
		LOC474869	PREDICTED: similar to HLA class II histocompatibility antigen, DO alpha chain precursor (MHC class II antigen DOA) (MHC DZ alpha) (MHC DN-alpha) isoform 11 [Canis familiaris].	224	9e-59	O
		DLA-DRA	MHC class II DR alpha chain [Canis lupus familiaris].	224	1e-58	O
		LOC474869	PREDICTED: similar to HLA class II histocompatibility antigen, DO alpha chain precursor (MHC class II antigen DOA) (MHC DZ alpha) (MHC DN-alpha) isoform 10 [Canis familiaris].	102	5e-22	O
		HLA-DMA	major histocompatibility complex, class II, DM alpha [Canis lupus familiaris].	70.1	4e-12	O
		LOC478284	PREDICTED: similar to beta-2-microglobulin precursor isoform 2 [Canis familiaris].	68.6	1e-11	O
		LOC478284	PREDICTED: similar to beta-2-microglobulin precursor isoform 3 [Canis familiaris].	68.6	1e-11	O
		HLA-DRB1	DLA class II histocompatibility antigen, DR-1 beta chain precursor [Canis lupus familiaris].	61.6	1e-09	O
		HLA-DQB1	major histocompatibility complex, class II, DQ beta 1 [Canis lupus familiaris].	59.7	5e-09	O
		LOC607827	PREDICTED: similar to HLA class II histocompatibility antigen, DM beta chain precursor (MHC class II antigen DMB) [Canis familiaris].	58.5	1e-08	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		HLA-DQA1	major histocompatibility complex, class II, DQ alpha 5 [Bos taurus].	370	e-102	O
		LOC100336394	PREDICTED: BOLA-DQA2 protein-like [Bos taurus].	362	e-100	O
		BOLA-DQA1	major histocompatibility complex, class II, DQ alpha, type 1 [Bos taurus].	360	1e-99	O
		BOLA-DQA3	major histocompatibility complex, class II, DQ alpha, type 3 [Bos taurus].	348	5e-96	O
		BOLA-DQA2	major histocompatibility complex, class II, DQ alpha 2 [Bos taurus].	333	2e-91	O
		BOLA-DYA	major histocompatibility complex, class II, DY alpha [Bos taurus].	301	7e-82	O
		HLA-DOA	HLA class II histocompatibility antigen, DO alpha chain [Bos taurus].	236	3e-62	O
		LOC525727	PREDICTED: MHC class II antigen-like [Bos taurus].	236	3e-62	O
		LOC525727	PREDICTED: MHC class II antigen-like [Bos taurus].	223	2e-58	O
		BOLA-DRA	major histocompatibility complex, class II, DR alpha [Bos taurus].	216	3e-56	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		SLA-DQA	SLA class II histocompatibility antigen, DQ haplotype C alpha chain precursor [Sus scrofa].	473	e-133	O
		SLA-DQA1	SLA class II histocompatibility antigen, DQ haplotype D alpha chain precursor [Sus scrofa].	453	e-128	O
		SLA	src-like-adapter [Sus scrofa].	254	8e-68	O
		SLA-DRA	MHC class II DR-alpha [Sus scrofa].	224	9e-59	O
		SLA-DMA	SLA-DM alpha chain [Sus scrofa].	81.6	8e-16	O
		SLA-DOA	major histocompatibility complex, class II, DO alpha [Sus scrofa].	81.6	8e-16	O
		B2M	beta-2-microglobulin precursor [Sus scrofa].	70.1	2e-12	O
		SLA-DMB	MHC class II, DM beta [Sus scrofa].	58.5	7e-09	O
		SLA-DQB1	SLA class II histocompatibility antigen, DQ haplotype C beta chain precursor [Sus scrofa].	56.6	3e-08	O
		LOC100513292	PREDICTED: DLA class II histocompatibility antigen, DR-1 beta chain-like [Sus scrofa].	56.2	3e-08	O

Alignment:      TOP

20110601C-000760 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
LNG01_0110_G01.b : nnntttgctgtgacttgacagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0068_B04.b :                                                             
SPL01_0098_H03.b :                                                             
ITT01_0043_F04.b :                                                             
ITT01_0099_C07.b :                                                             
ITT01_0083_F01.b :                                                             
LNG01_0078_H07.b :                                                             


20110601C-000760 : .............ACATAGGCCGTCTTCAGCCGCAGCATCGAGTCGGCCGTCTTCAGCCG
                   ---------+---------+---------+---------+---------+---------+ 47
LNG01_0110_G01.b : xxxxxxxxxcgctACATAGGCCGTCTTCAGCCGCAGCATCGAGTCGGCCGTCTTCAGCCG
ITT01_0068_B04.b :                                 nnnggtgatacaxxxxxxxxxxxxxxxx
SPL01_0098_H03.b :          nnnnggatagtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0043_F04.b :                                    nnnggtgtaacxxxxxxxxxxxxxx
ITT01_0099_C07.b :                                      nggtgcaacxxxxxxxxxxxxxx
ITT01_0083_F01.b :                                      nnnaatgaacaxxxxxxxxxxxx
LNG01_0078_H07.b :            nnntttggctggacttgacagtttgtcxxxxxxxxxxxxxxxxxxxxxx


20110601C-000760 : CAGCATCGAGTCGGCCTTGTTGGCCTACTGATCATTGCTCTACAACTCCGAAGAGCAAGA
                   ---------+---------+---------+---------+---------+---------+ 107
LNG01_0110_G01.b : CAGCATCGAGTCGGCCTTGTTGGCCTACTGATCATTGCTCTACAACTCCGAAGAGCAAGA
ITT01_0068_B04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxTCATCATTGCTCTACAACTCCGAAGAGCAAGA
SPL01_0098_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxcTTCATTGCTCTACAACTCCGAAGAGCAAGA
ITT01_0043_F04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATCATTGCTCTACAACTCCGAAGAGCAAGA
ITT01_0099_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCATTGCTCTACAACTCCGAAGAGCAAGA
ITT01_0083_F01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCATTGCTCTACAACTCCGAAGAGCAAGA
LNG01_0078_H07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCATTGCTCTACAACTCCGAAGAGCAAGA


20110601C-000760 : GCTGAGACCACCTTGAGAAGAGCATGGTCCCAGGCCGAGTTCTGATGTGGGGGGCCCTCG
                   ---------+---------+---------+---------+---------+---------+ 167
LNG01_0110_G01.b : GCTGAGACCACCTTGAGAAGAGCATGGTCCCAGGCCGAGTTCTGATGTGGGGGGCCCTCG
ITT01_0068_B04.b : GCTGAGACCACCTTGAGAAGAGCATGGTCCCAGGCCGAGTTCTGATGTGGGGGGCCCTCG
SPL01_0098_H03.b : GCTGAGACCACCTTGAGAAGAGCATGGTCCCAGGCCGAGTTCTGATGTGGGGGGCCCTCG
ITT01_0043_F04.b : GCTGAGACCACCTTGAGAAGAGCATGGTCCCAGGCCGAGTTCTGATGTGGGGGGCCCTCG
ITT01_0099_C07.b : GCTGAGACCACCTTGAGAAGAGCATGGTCCCAGGCCGAGTTCTGATGTGGGGGGCCCTCG
ITT01_0083_F01.b : GCTGAGACCACCTTGAGAAGAGCATGGTCCCAGGCCGAGTTCTGATGTGGGGGGCCCTCG
LNG01_0078_H07.b : GCTGAGACCACCTTGAGAAGAGCATGGTCCCAGGCCGAGTTCTGATGTGGGGGGCCCTCG


20110601C-000760 : CCCTGACCACCGTGATGAGCGCCTGTGGAGGTGAAGACATTGCGGCCGACCATGTTGCCT
                   ---------+---------+---------+---------+---------+---------+ 227
LNG01_0110_G01.b : CCCTGACCACCGTGATGAGCGCCTGTGGAGGTGAAGACATTGCGGCCGACCATGTTGCCT
ITT01_0068_B04.b : CCCTGACCACCGTGATGAGCGCCTGTGGAGGTGAAGACATTGCGGCCGACCATGTTGCCT
SPL01_0098_H03.b : CCCTGACCACCGTGATGAGCGCCTGTGGAGGTGAAGACATTGCGGCCGACCATGTTGCCT
ITT01_0043_F04.b : CCCTGACCACCGTGATGAGCGCCTGTGGAGGTGAAGACATTGCGGCCGACCATGTTGCCT
ITT01_0099_C07.b : CCCTGACCACCGTGATGAGCGCCTGTGGAGGTGAAGACATTGCGGCCGACCATGTTGCCT
ITT01_0083_F01.b : CCCTGACCACCGTGATGAGCGCCTGTGGAGGTGAAGACATTGCGGCCGACCATGTTGCCT
LNG01_0078_H07.b : CCCTGACCACCGTGATGAGCGCCTGTGGAGGTGAAGACATTGCGGCCGACCATGTTGCCT


20110601C-000760 : CCTATGGCTTAAATGTCTACCAGTCTTACGGTCCCAGCGGCTATTTTACCCATGAATTTG
                   ---------+---------+---------+---------+---------+---------+ 287
LNG01_0110_G01.b : CCTATGGCTTAAATGTCTACCAGTCTTACGGTCCCAGCGGCTATTTTACCCATGAATTTG
ITT01_0068_B04.b : CCTATGGCTTAAATGTCTACCAGTCTTACGGTCCCAGCGGCTATTTTACCCATGAATTTG
SPL01_0098_H03.b : CCTATGGCTTAAATGTCTACCAGTCTTACGGTCCCAGCGGCTATTTTACCCATGAATTTG
ITT01_0043_F04.b : CCTATGGCTTAAATGTCTACCAGTCTTACGGTCCCAGCGGCTATTTTACCCATGAATTTG
ITT01_0099_C07.b : CCTATGGCTTAAATGTCTACCAGTCTTACGGTCCCAGCGGCTATTTTACCCATGAATTTG
ITT01_0083_F01.b : CCTATGGCTTAAATGTCTACCAGTCTTACGGTCCCAGCGGCTATTTTACCCATGAATTTG
LNG01_0078_H07.b : CCTATGGCTTAAATGTCTACCAGTCTTACGGTCCCAGCGGCTATTTTACCCATGAATTTG


20110601C-000760 : ATGGCGACGAGGAATTCTACGTGGACCTGGAGAAGAAGGAGACTGTCTGGCGGCTGCCTC
                   ---------+---------+---------+---------+---------+---------+ 347
LNG01_0110_G01.b : ATGGCGACGAGGAATTCTACGTGGACCTGGAGAAGAAGGAGACTGTCTGGCGGCTGCCTC
ITT01_0068_B04.b : ATGGCGACGAGGAATTCTACGTGGACCTGGAGAAGAAGGAGACTGTCTGGCGGCTGCCTC
SPL01_0098_H03.b : ATGGCGACGAGGAATTCTACGTGGACCTGGAGAAGAAGGAGACTGTCTGGCGGCTGCCTC
ITT01_0043_F04.b : ATGGCGACGAGGAATTCTACGTGGACCTGGAGAAGAAGGAGACTGTCTGGCGGCTGCCTC
ITT01_0099_C07.b : ATGGCGACGAGGAATTCTACGTGGACCTGGAGAAGAAGGAGACTGTCTGGCGGCTGCCTC
ITT01_0083_F01.b : ATGGCGACGAGGAATTCTACGTGGACCTGGAGAAGAAGGAGACTGTCTGGCGGCTGCCTC
LNG01_0078_H07.b : ATGGCGACGAGGAATTCTACGTGGACCTGGAGAAGAAGGAGACTGTCTGGCGGCTGCCTC


20110601C-000760 : TGTTTAGTGAATTTACAAGTTTTGACCCGCAGGGTGCACTGAGGAATATAGCTACGTTAA
                   ---------+---------+---------+---------+---------+---------+ 407
LNG01_0110_G01.b : TGTTTAGTGAATTTACAAGTTTTGACCCGCAGGGTGCACTGAGGAATATAGCTACGTTAA
ITT01_0068_B04.b : TGTTTAGTGAATTTACAAGTTTTGACCCGCAGGGTGCACTGAGGAATATAGCTACGTTAA
SPL01_0098_H03.b : TGTTTAGTGAATTTACAAGTTTTGACCCGCAGGGTGCACTGAGGAATATAGCTACGTTAA
ITT01_0043_F04.b : TGTTTAGTGAATTTACAAGTTTTGACCCGCAGGGTGCACTGAGGAATATAGCTACGTTAA
ITT01_0099_C07.b : TGTTTAGTGAATTTACAAGTTTTGACCCGCAGGGTGCACTGAGGAATATAGCTACGTTAA
ITT01_0083_F01.b : TGTTTAGTGAATTTACAAGTTTTGACCCGCAGGGTGCACTGAGGAATATAGCTACGTTAA
LNG01_0078_H07.b : TGTTTAGTGAATTTACAAGTTTTGACCCGCAGGGTGCACTGAGGAATATAGCTACGTTAA


20110601C-000760 : AACATAACTTGAACATCGTGACTAAACGCTCCAACAACACCGCGGCTGTCAATCAGGTTC
                   ---------+---------+---------+---------+---------+---------+ 467
LNG01_0110_G01.b : AACATAACTTGAACATCGTGACTAAACGCTCCAACAACACCGCGGCTGTCAATCAGGTTC
ITT01_0068_B04.b : AACATAACTTGAACATCGTGACTAAACGCTCCAACAACACCGCGGCTGTCAATCAGGTTC
SPL01_0098_H03.b : AACATAACTTGAACATCGTGACTAAACGCTCCAACAACACCGCGGCTGTCAATCAGGTTC
ITT01_0043_F04.b : AACATAACTTGAACATCGTGACTAAACGCTCCAACAACACCGCGGCTGTCAATCAGGTTC
ITT01_0099_C07.b : AACATAACTTGAACATCGTGACTAAACGCTCCAACAACACCGCGGCTGTCAATCAGGTTC
ITT01_0083_F01.b : AACATAACTTGAACATCGTGACTAAACGCTCCAACAACACCGCGGCTGTCAATCAGGTTC
LNG01_0078_H07.b : AACATAACTTGAACATCGTGACTAAACGCTCCAACAACACCGCGGCTGTCAATCAGGTTC


20110601C-000760 : CTGAGGTGACTGTGTTTTCCAAGTCTCCAGTGATACTGGGTCAGCCCAACACCCTCATCT
                   ---------+---------+---------+---------+---------+---------+ 527
LNG01_0110_G01.b : CTGAGGTGACTGTGTTTTCCAAGTCTCCAGTGATACTGGGTCAGCCCAACACCCTCATCT
ITT01_0068_B04.b : CTGAGGTGACTGTGTTTTCCAAGTCTCCAGTGATACTGGGTCAGCCCAACACCCTCATCT
SPL01_0098_H03.b : CTGAGGTGACTGTGTTTTCCAAGTCTCCAGTGATACTGGGTCAGCCCAACACCCTCATCT
ITT01_0043_F04.b : CTGAGGTGACTGTGTTTTCCAAGTCTCCAGTGATACTGGGTCAGCCCAACACCCTCATCC
ITT01_0099_C07.b : CTGAGGTGACTGTGTTTTCCAAGTCTCCAGTGATACTGGGTCAGCCCAACACCCTCATCT
ITT01_0083_F01.b : CTGAGGTGACTGTGTTTTCCAAGTCTCCAGTGATACTGGGTCAGCCCAACACCCTCATCT
LNG01_0078_H07.b : CTGAGGTGACTGTGTTTTCCAAGTCTCCAGTGATACTGGGTCAGCCCAACACCCTCATCT


20110601C-000760 : GTCATGTGGACAGCATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACT
                   ---------+---------+---------+---------+---------+---------+ 587
LNG01_0110_G01.b : GTCATGTGGACAGCATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACT
ITT01_0068_B04.b : GTCATGTGGACAGCATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACT
SPL01_0098_H03.b : GTCATGTGGACAGCATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACT
ITT01_0043_F04.b : GTCATGTGGACAGCATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACT
ITT01_0099_C07.b : GTCATGTGGACAGCATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACT
ITT01_0083_F01.b : GTCATGTGGACAGCATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACT
LNG01_0078_H07.b : GTCATGTGGACAGCATCTTTCCTCCTGTGATCAACATCACGTGGTTGAAGAACGGGCACT


20110601C-000760 : CTGTCAAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGA
                   ---------+---------+---------+---------+---------+---------+ 647
LNG01_0110_G01.b : CTGTCAAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGA
ITT01_0068_B04.b : CTGTCAAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGA
SPL01_0098_H03.b : CTGTCAAAGGTTTTTCTGAGGCCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGA
ITT01_0043_F04.b : CTGTCAAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGA
ITT01_0099_C07.b : CTGTCAAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGA
ITT01_0083_F01.b : CTGTCAAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGA
LNG01_0078_H07.b : CTGTCAAAGGTTTTTCTGAGACCAGCTTCCTCTCCAAAAATGATCATTCCTTCCTCAAGA


20110601C-000760 : TCAGTTATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACT
                   ---------+---------+---------+---------+---------+---------+ 707
LNG01_0110_G01.b : TCAGTTATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACT
ITT01_0068_B04.b : TCAGTTATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACT
SPL01_0098_H03.b : TCAGTTATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACT
ITT01_0043_F04.b : TCAGTTATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACT
ITT01_0099_C07.b : TCAGTTATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACT
ITT01_0083_F01.b : TCAGTTATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACT
LNG01_0078_H07.b : TCAGTTATCTCACCTTCCTCCCTTCTGATGATGATTTTTATGACTGCAAAGTGGAGCACT


20110601C-000760 : GGGGCCTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAG
                   ---------+---------+---------+---------+---------+---------+ 767
LNG01_0110_G01.b : GGGGCCTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAG
ITT01_0068_B04.b : GGGGCCTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAG
SPL01_0098_H03.b : GGGGCCTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAG
ITT01_0043_F04.b : GGGGCCTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAG
ITT01_0099_C07.b : GGGGCCTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAG
ITT01_0083_F01.b : GGGGCCTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCACCCATGTCAG
LNG01_0078_H07.b : GGGGCCTGGATAAGCCACTTCTGAAACACTGGGAACCTGAGATTCCAGCCCCCATGTCAG


20110601C-000760 : AGCTGACAGAGACTGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGG
                   ---------+---------+---------+---------+---------+---------+ 827
LNG01_0110_G01.b : AGCTGACAGAGACTGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTG*GGGCATCGTGG
ITT01_0068_B04.b : AGCTGACAGAGACTGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGG
SPL01_0098_H03.b : AGCTGACAGAGACTGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGG
ITT01_0043_F04.b : AGCTGACAGAGACTGTGGTCTGCGCCCTGNGATTGATCGTGGGCCTTGTGGGCATCGTGG
ITT01_0099_C07.b : AGCTGACAGAGACTGTGGTCTGCGCCCTGGGATTGATCGTGGGCCTTGTGGGCATCGTGG
ITT01_0083_F01.b : AGCTGACAGAGACTGTGGTCTGCGCCCTGNGATTGATCGTGGGCCTTGTGGGCATCGTGG
LNG01_0078_H07.b : AGCTGACAGAGACTGTGGTCTGCGCCCTGNGATTGATCGTGGGCCTTGTGGGCATCGTGG


20110601C-000760 : TGGGCACTGTCTTCATCATTCAAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGT
                   ---------+---------+---------+---------+---------+---------+ 887
LNG01_0110_G01.b : TGGGCACTGGCTTCATCATTCTAGGCCTGCGCTCCGGTGGTCCCTCTAGACACCAAGGGT
ITT01_0068_B04.b : TGGGCACTGTCTTCATCATTNCAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGT
SPL01_0098_H03.b : TGGGCACTGTCTTCATCATTCAAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGG
ITT01_0043_F04.b : TGGGCACTGTCTTCATCATTNCAGGCCTGCGCTCANGTGGTCCCTCTAGACACCAAGGGT
ITT01_0099_C07.b : TGGGCACTGTCTTCATCATTNCAGGCCTGCGCTCAGGTGGTCCCTCTAGACACCAAGGGT
ITT01_0083_F01.b : TGGGCACTGTCTTCATCATTCAAGGCCTGCGCTCANGTGGTCCCTCTAGACACCAAGGGT
LNG01_0078_H07.b : TGGGCACTGTCTTCATCATTCAAGGCCTGCGCTCANGTGGTCCCTCTAGACACCAAGGGT


20110601C-000760 : CCTTGTGAGTCACACTCCAGAAGGGAAGGAGCACTGCCCGCCTACAAGAGCTGAAGAGTG
                   ---------+---------+---------+---------+---------+---------+ 947
LNG01_0110_G01.b : CCTTGTGAGTCACACTCCgaaggaaaggagcacttgcccgctacaagagccgaaaaggga
ITT01_0068_B04.b : CCTTGTGAGTCACACTCCAGAAGGGAAGGAGCACTGCCCGCCTACAAGAGCTGAAGAGTG
SPL01_0098_H03.b : TCTTGTGAGTCACACTCCAAAGGGAANGGAGCACTGCCCGCCTACAANAGCTGAAAAGTG
ITT01_0043_F04.b : CCTTGTGAGTCACACTCCAGAAGGGAAGGAGCACTGCCCGCCTACAAGAGCTGAAGAGTG
ITT01_0099_C07.b : CCTTGTGAGTCACACTCCAGAAAGGAAGGAGCACTGCCCGCCTACAAGAGCTGAAGAGTG
ITT01_0083_F01.b : CCTTGTGAGTCACACTCCAGAAGGGAAGGAGCACTGCCCCGCTACAAGAGCTGAAGAGTG
LNG01_0078_H07.b : CCTTGTGAGTCACACTCCAGAAGGGAAGGAGCACTNGCCGCCTACAAGAGCTGAAGAGTG


20110601C-000760 : GATGTGCTCAACGACCTAGAACTATTTTCTGGCCCAATTCATCATATACCTTCTCTCTTC
                   ---------+---------+---------+---------+---------+---------+ 1007
LNG01_0110_G01.b : tgtgcttcacacctagaaatattttctggcaaattcatataaaaccttctctcttccaaa
ITT01_0068_B04.b : GATGTGCTCAACGACCTAGAACTATTTTCTGGGNCAAATCATCATATACCTTCTCTCTTC
SPL01_0098_H03.b : GATGTGCTCACCGACCTAGAACTATTTTCTG*CCCAATTCATCATA*ACCCTCTCTCTTT
ITT01_0043_F04.b : GATGTGCNTCACGACCTAGAACTATTTTCTGGGCCNAATCATCATATACCTTCTCTCTTC
ITT01_0099_C07.b : GATGTGCTCAACGACCTANAACTATTTTCTGGCCAAATTCATCATATACCTTCTCTCTTC
ITT01_0083_F01.b : GATGTGCTNCACGACCTAGAACTATTTTCTGGCCAAATTCATCATATACCTTCTCTCTTT
LNG01_0078_H07.b : GATGTGCTNCACGACCTAGAACTATTTTCTG*CCCAAATCATCATATACCTTCTCTCTCC


20110601C-000760 : CTACATTCTTCTTCTCACCTCTTCTCTGG*AACTTAAGGTGCTGTGTCATCTCAGAATTC
                   ---------+---------+---------+---------+---------+---------+ 1066
LNG01_0110_G01.b : tcttcttccaccctttttttggaactaaggtgttgggaacccaaaaatcaaaggcccttg
ITT01_0068_B04.b : CTACATTCTTCTTCTCACCTCTTCTCTGG*AACTTTAAGTGCTGTGTCATCTCAGATTTC
SPL01_0098_H03.b : CTACTTTCTTCTTCTCACCTCTTCTCTGGGAATTAAGGTGCTtgggcattcccaaaatcc
ITT01_0043_F04.b : CTACATTCTTTCTTCTCACTCTTCTCTGG*AACTTNAGGTGCTGTGTCATCTCAGAAATC
ITT01_0099_C07.b : CTACATTCTTCTTCTCACCTCTTCTCTGGGAACTTAGGGTGCTGTGTCATCTCAGAATCA
ITT01_0083_F01.b : CTACATTCTTCTTTCTCACTCTTCTCTGG*AACTTAAGGTGCTGTGTCATCTCAAAATTC
LNG01_0078_H07.b : NTACATTCTTTCTCTCACCTCTTCTCTGG*AACTTTAGGTGCTGTGTCATCTCAAAATTC


20110601C-000760 : ATATGCCCTTGGGATCCTTTTTCCGACCTTCTAGGTCTTTTTC*TTTTCTCAGTGGTACC
                   ---------+---------+---------+---------+---------+---------+ 1125
LNG01_0110_G01.b : gaaacccctctcgacctctcgggtcttttcttttccaatgtgtaccgttagggaacccga
ITT01_0068_B04.b : ATATGCCCTTGGGAATCTTCTTCTGACCTTCTAGGTCTTTTTC*TTTTCTCAGTTGTacc
SPL01_0098_H03.b : tatgccccttggaatcctcttctgaacttccaaggtctttttcttttcccgttggtaccc
ITT01_0043_F04.b : ATATGCCCCTGGGATCCCTCTTCCTGACNTCTAAGTCTTTTTC*TTTTCTCAGTGNTACC
ITT01_0099_C07.b : TATGCCCCTTGGAATCCTCTTCCTGACCCTCTAGGTCTTTTTC*TTTctcagttgntacc
ITT01_0083_F01.b : ATATGCCCCTTGGATCCCTTCTCCGACCTTCTAGGTCTTTTTCTTTTTCTCAGTGNTACC
LNG01_0078_H07.b : ATATGCCCTTGGGATCCTCTTCCTGACCTTCTAGGTCTTTTTTCTTTCTCCAGTGTTACC


20110601C-000760 : TTGTTATGGGATCTCTGAAAATCCCACTCCGCTACCTGATCCCTCAGTGACCC.......
                   ---------+---------+---------+---------+---------+---------+ 1178
LNG01_0110_G01.b : aatacccctcggcccccgttccccagtggcccaaacaatgtatggggacacctaatcctc
ITT01_0068_B04.b : tgttatgggatctccgaaatttccactcgggtacttgatcctcggtgacctaaactatat
SPL01_0098_H03.b : tgttagggaattccaaaaattcccctccgctactggatcccccgggacctcaaactaatt
ITT01_0043_F04.b : *TGGTATGGGATCTCTGAAAATCCCACTCCGCTACCTGATCCCTCAGTGACCCctaaact
ITT01_0099_C07.b : tgtttgggatctccgaaattccccctcggctacctgatccctcatgaccttaactaattg
ITT01_0083_F01.b : NTGTTATGGGATCTCTGAaatttccaatcgggctactgatccctcagtgacccctaacta
LNG01_0078_H07.b : TGTTtatgggatctctgagatttcccaatctggctacctgattcctcagtgacccctaac


20110601C-000760 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1178
LNG01_0110_G01.b : ctggggttaaaaaaaaaacaaaacggcgttttcttgtgtggttcgggcctcttaattctc
ITT01_0068_B04.b : gacttgggaaacataatcccttctgaagttttgtctggaaaaaaaaaaaaaaggccactg
SPL01_0098_H03.b : ggtcctggaaacataaaatcccttctgg                               
ITT01_0043_F04.b : atatgtacatgaaanncataatccccttctgaaggttttgaactgnnnnanannnnnnnn
ITT01_0099_C07.b : tactggaaacaaaatcccttcgtgagtttttgtnnaaaaaaaaaaaaaancaannnncna
ITT01_0083_F01.b : attgtacatgaaaccaataatcctttcgggaagttttgtactgaaaaaaaaaaaaaaaaa
LNG01_0078_H07.b : tatatgtacatggaaaccataaatcccttctggaggttttggactgaaaaaaaaaaaaaa


20110601C-000760 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1178
LNG01_0110_G01.b : tggggccgcttccctcccctctttgtagagggccctaagtggtatataaaaggcggcccc
ITT01_0068_B04.b : tgccgaactcagttccggcccctctaagttactcagggggcaagctacggcccacctttt
SPL01_0098_H03.b :                                                             
ITT01_0043_F04.b : nnnnnnnnnnnnnannaaaaannnaannnnnnnnaagccactgttttcaacttggagtcg
ITT01_0099_C07.b : cnnanncnaanaaanaaaaagcccttgtctcaatcaggtccggccctctaaattctcttg
ITT01_0083_F01.b : aaaaagcccaatgtgctcaactcaggtccgggcccctctcaattcctttgggggccaaat
LNG01_0078_H07.b : aaaaaggccattggcccgaattgcgggtcgggccgctcaaattcccttgggggccaaatt


20110601C-000760 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1178
LNG01_0110_G01.b : ttttacctgtggaagaactctctgtctctata                           
ITT01_0068_B04.b : ggaaaggggccctaaggaacttaataacgaggccggcccgctttaccccggacggaaaac
SPL01_0098_H03.b :                                                             
ITT01_0043_F04.b : ggccccttaaattccctggggggacaacctacccaccccttttctgtaaagaggctctta
ITT01_0099_C07.b : ggcccagttacccacctcttttgaaagggtcccaggagcgattagcgagccggcttttta
ITT01_0083_F01.b : ttacgctcccatttttttaaaaagggccccaaagggcgtatttaacgggcgcgggcgttt
LNG01_0078_H07.b : acggtcccattttttggaaaagggccccaggtgatccaattaaaagggcggggccccttt


20110601C-000760 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1178
LNG01_0110_G01.b :                                                             
ITT01_0068_B04.b : gctctgggcatttggaaaccttctctgggtcatttggacccctccaattcctcgggaata
SPL01_0098_H03.b :                                                             
ITT01_0043_F04.b : tggagcctattaaacggacggcgcccttttaaaccttcggaaacactctgtggtatttta
ITT01_0099_C07.b : cccgcgcggaacctctttgtatcttgaacacctttgggggaatggacaccccaatacccg
ITT01_0083_F01.b : tttacccctgagggaaaacctctttggattttgagaaccttttc               
LNG01_0078_H07.b : taaccccttagggaaaaacttcttggttctttaaaaacctcttcttggtttcatttgaac


20110601C-000760 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1178
LNG01_0110_G01.b :                                                             
ITT01_0068_B04.b : tattttgtatggttaccccctcgccgcgatttcttgatattaaataaacgcccgtttttt
SPL01_0098_H03.b :                                                             
ITT01_0043_F04.b : gaaattttcttggggatttgacaccccccataacccggggaaaatttgtggtgcaccccc
ITT01_0099_C07.b : gaaaaatttggttgttaccccctgctccgctttcctcaataaaaaacacgttattttttc
ITT01_0083_F01.b :                                                             
LNG01_0078_H07.b : ccccccgattagcccggaaaaaatttttttaggtttacccctctccgcccggttttacaa


20110601C-000760 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1178
LNG01_0110_G01.b :                                                             
ITT01_0068_B04.b : gttatatcccgcgcccccccccgtttcacccgtgtttttccccgcagatggtgtgtttaa
SPL01_0098_H03.b :                                                             
ITT01_0043_F04.b : tggcgccggttctcatataatacacccgctattgtgttaaccgggtccccccggtcaccc
ITT01_0099_C07.b : tcccccgcccccctctaaccct                                     
ITT01_0083_F01.b :                                                             
LNG01_0078_H07.b : ataaaaaa                                                   


20110601C-000760 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1178
LNG01_0110_G01.b :                                                             
ITT01_0068_B04.b : ccatttgg                                                   
SPL01_0098_H03.b :                                                             
ITT01_0043_F04.b : tgtttaaccgcagtgttggacatt                                   
ITT01_0099_C07.b :                                                             
ITT01_0083_F01.b :                                                             
LNG01_0078_H07.b :