Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-001361

Sequence: [FASTA format sequence] TCCACTCCGA CTCGGTGTCC TCCTGCCTTG GAGAAGAAAA GCAGACCTGA GGACATCCTG TGACCAGACC AGAAACCTCC CACCTGTCCA GCTCCTTCCC CAGATGGACA TGGGGTCCAG CTCCTGGCCC CTTCTGGTAC TAAACCTACT GCTGCTTCTA CTGGCACTGC CACTTGAAGG CCAGGACAAC TTAAGATGCC ATGGGATCCC TGGGATACCG GGCCTGCCTG GGGCCCCCGG GAAGGATGGG CATGATGGAC TGCCAGGGCC CAAGGGTGAG CCAGGAATCC CAGCTATCCC TGGGACACGT GGACCCAAGG GTGAGAAGGG AGATCCCGGC AAACCTGGCC TTCCTGGAAA AAATGGTCCC ATGGGAACCC CTGGGATTCC AGGGACTCCC GGAGTCATGG GACCCCGTGG GGAGCCGGGT GAGGAGGGAA GATATAAGCA GAAGCACCAG TCAGTGTTCT CCGTCACACG GCAGACGGCC CAGTACCCAG CGGCCAACAG CTTGGTCAAG TTCAACAACG TCATCACCAA CCCGCAGGGG GATTATGACA TCAACACTGG CAAGTTCACC TGCAAAGTCC CCGGCCTCTA CTACTTTGTC TACTACACAT CACACACGGC CAACCTGTGT ATGCTGCTCT ACCGCAACGG CTTCAAGGTG ATCACCTTCT GTGACCACAT GTCTAATAGC AAGCAGGTCA GCTCGGGCGG TGTGCTGTTG CGGCTGCAGG AGGGCGAGCA GGTGTGGCTG GGAGTCAACG ACTACAATGG CCTGGTGGGC ATGGAGGGCT CCGACAGCAT CTTCTCCGGC TTCTTGCTCT TCCCTAACTA GGGCGGGCAG GCCTGCTCCC ACCCTGGGGC CACCCCACCT CCCTCAGCTT TCCCGCAAGA GCCTGCTGTG CCACATCCTT GCTCAGGCCA TTCTCGCCAC TGGATGGACT CCTCCTCCAG GAAGCCACCC TGCCATCCTA CCCCATGAAT TCTCGCCCTC CTCTGAACTC CTTCAGTAGT CCCTGCTTTG AAACTTAACC GACACTTTCG GGGACTGTCA TTAATTTC

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
C1QC complement C1q subcomponent subunit C precursor [Homo sapiens]. 254 1e-67 O

C1QC complement C1q subcomponent subunit C precursor [Homo sapiens]. 254 1e-67 O

C1QB complement C1q subcomponent subunit B precursor [Homo sapiens]. 141 9e-34 O

C1QTNF5 complement C1q tumor necrosis factor-related protein 5 precursor [Homo sapiens]. 95.1 1e-19 O

C1QTNF9 complement C1q tumor necrosis factor-related protein 9A precursor [Homo sapiens]. 92.4 6e-19

ADIPOQ adiponectin precursor [Homo sapiens]. 89.7 4e-18 O

ADIPOQ adiponectin precursor [Homo sapiens]. 89.7 4e-18 O

C1QTNF9B complement C1q tumor necrosis factor-related protein 9B precursor [Homo sapiens]. 88.2 1e-17

C1QA complement C1q subcomponent subunit A precursor [Homo sapiens]. 85.1 1e-16 O

C1QTNF2 complement C1q tumor necrosis factor-related protein 2 [Homo sapiens]. 83.2 1e-16

Locus	Definition	Score	E value	FL
C1QC	complement C1q subcomponent subunit C precursor [Homo sapiens].	254	1e-67	O
C1QC	complement C1q subcomponent subunit C precursor [Homo sapiens].	254	1e-67	O
C1QB	complement C1q subcomponent subunit B precursor [Homo sapiens].	141	9e-34	O
C1QTNF5	complement C1q tumor necrosis factor-related protein 5 precursor [Homo sapiens].	95.1	1e-19	O
C1QTNF9	complement C1q tumor necrosis factor-related protein 9A precursor [Homo sapiens].	92.4	6e-19
ADIPOQ	adiponectin precursor [Homo sapiens].	89.7	4e-18	O
ADIPOQ	adiponectin precursor [Homo sapiens].	89.7	4e-18	O
C1QTNF9B	complement C1q tumor necrosis factor-related protein 9B precursor [Homo sapiens].	88.2	1e-17
C1QA	complement C1q subcomponent subunit A precursor [Homo sapiens].	85.1	1e-16	O
C1QTNF2	complement C1q tumor necrosis factor-related protein 2 [Homo sapiens].	83.2	1e-16

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
C1qc complement C1q subcomponent subunit C precursor [Mus musculus]. 249 2e-66 O

C1qb complement C1q subcomponent subunit B precursor [Mus musculus]. 130 2e-30 O

C1qtnf5 complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus]. 97.4 2e-20 O

C1qtnf5 complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus]. 97.4 2e-20 O

C1qtnf5 complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus]. 97.4 2e-20 O

C1qtnf5 complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus]. 97.4 2e-20 O

C1qtnf5 complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus]. 97.4 2e-20 O

C1qtnf9 complement C1q tumor necrosis factor-related protein 9 precursor [Mus musculus]. 91.3 1e-18

Adipoq adiponectin [Mus musculus]. 87.4 2e-17 O

C1qtnf2 complement C1q tumor necrosis factor-related protein 2 precursor [Mus musculus]. 85.9 5e-18

Locus	Definition	Score	E value	FL
C1qc	complement C1q subcomponent subunit C precursor [Mus musculus].	249	2e-66	O
C1qb	complement C1q subcomponent subunit B precursor [Mus musculus].	130	2e-30	O
C1qtnf5	complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus].	97.4	2e-20	O
C1qtnf5	complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus].	97.4	2e-20	O
C1qtnf5	complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus].	97.4	2e-20	O
C1qtnf5	complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus].	97.4	2e-20	O
C1qtnf5	complement C1q tumor necrosis factor-related protein 5 precursor [Mus musculus].	97.4	2e-20	O
C1qtnf9	complement C1q tumor necrosis factor-related protein 9 precursor [Mus musculus].	91.3	1e-18
Adipoq	adiponectin [Mus musculus].	87.4	2e-17	O
C1qtnf2	complement C1q tumor necrosis factor-related protein 2 precursor [Mus musculus].	85.9	5e-18

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC487382 PREDICTED: similar to complement component 1, q subcomponent, gamma polypeptide [Canis familiaris]. 281 7e-76 O

LOC487381 PREDICTED: similar to complement component 1, q subcomponent, beta polypeptide precursor [Canis familiaris]. 133 3e-31 O

LOC478194 PREDICTED: similar to Complement C1q subcomponent, A chain precursor [Canis familiaris]. 95.5 8e-20 O

LOC609026 PREDICTED: similar to adipocyte complement related protein of 30 kDa [Canis familiaris]. 94 6e-20

LOC610562 PREDICTED: similar to C1q and tumor necrosis factor related protein 5 [Canis familiaris]. 91.3 1e-18 O

LOC489149 PREDICTED: similar to C1q and tumor necrosis factor related protein 2 [Canis familiaris]. 83.2 4e-16

ADIPOQ adiponectin [Canis lupus familiaris]. 82.4 7e-16 O

LOC611118 PREDICTED: similar to collagen, type X, alpha 1 precursor [Canis familiaris]. 79.3 6e-15

LOC609169 PREDICTED: similar to C1q and tumor necrosis factor related protein 7 isoform 1 [Canis familiaris]. 77.4 2e-14

LOC609169 PREDICTED: similar to C1q and tumor necrosis factor related protein 7 isoform 2 [Canis familiaris]. 77.4 2e-14 O

Locus	Definition	Score	E value	FL
LOC487382	PREDICTED: similar to complement component 1, q subcomponent, gamma polypeptide [Canis familiaris].	281	7e-76	O
LOC487381	PREDICTED: similar to complement component 1, q subcomponent, beta polypeptide precursor [Canis familiaris].	133	3e-31	O
LOC478194	PREDICTED: similar to Complement C1q subcomponent, A chain precursor [Canis familiaris].	95.5	8e-20	O
LOC609026	PREDICTED: similar to adipocyte complement related protein of 30 kDa [Canis familiaris].	94	6e-20
LOC610562	PREDICTED: similar to C1q and tumor necrosis factor related protein 5 [Canis familiaris].	91.3	1e-18	O
LOC489149	PREDICTED: similar to C1q and tumor necrosis factor related protein 2 [Canis familiaris].	83.2	4e-16
ADIPOQ	adiponectin [Canis lupus familiaris].	82.4	7e-16	O
LOC611118	PREDICTED: similar to collagen, type X, alpha 1 precursor [Canis familiaris].	79.3	6e-15
LOC609169	PREDICTED: similar to C1q and tumor necrosis factor related protein 7 isoform 1 [Canis familiaris].	77.4	2e-14
LOC609169	PREDICTED: similar to C1q and tumor necrosis factor related protein 7 isoform 2 [Canis familiaris].	77.4	2e-14	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
C1QC complement C1q subcomponent subunit C [Bos taurus]. 278 5e-75 O

C1QB complement C1q subcomponent subunit B precursor [Bos taurus]. 125 6e-29 O

C1QTNF5 complement C1q tumor necrosis factor-related protein 5 [Bos taurus]. 95.1 9e-20 O

C1QTNF9 complement C1q tumor necrosis factor-related protein 9 precursor [Bos taurus]. 94.4 2e-19

C1QA complement C1q subcomponent subunit A precursor [Bos taurus]. 92 8e-19 O

ADIPOQ adiponectin [Bos taurus]. 85.5 7e-17 O

C1QTNF2 PREDICTED: C1q and tumor necrosis factor related protein 2-like [Bos taurus]. 83.2 4e-16

C1QTNF2 PREDICTED: C1q and tumor necrosis factor related protein 2-like [Bos taurus]. 83.2 4e-16

COL10A1 collagen alpha-1(X) chain precursor [Bos taurus]. 80.9 2e-15

LOC525044 PREDICTED: otolin-1-like [Bos taurus]. 78.2 1e-14

Locus	Definition	Score	E value	FL
C1QC	complement C1q subcomponent subunit C [Bos taurus].	278	5e-75	O
C1QB	complement C1q subcomponent subunit B precursor [Bos taurus].	125	6e-29	O
C1QTNF5	complement C1q tumor necrosis factor-related protein 5 [Bos taurus].	95.1	9e-20	O
C1QTNF9	complement C1q tumor necrosis factor-related protein 9 precursor [Bos taurus].	94.4	2e-19
C1QA	complement C1q subcomponent subunit A precursor [Bos taurus].	92	8e-19	O
ADIPOQ	adiponectin [Bos taurus].	85.5	7e-17	O
C1QTNF2	PREDICTED: C1q and tumor necrosis factor related protein 2-like [Bos taurus].	83.2	4e-16
C1QTNF2	PREDICTED: C1q and tumor necrosis factor related protein 2-like [Bos taurus].	83.2	4e-16
COL10A1	collagen alpha-1(X) chain precursor [Bos taurus].	80.9	2e-15
LOC525044	PREDICTED: otolin-1-like [Bos taurus].	78.2	1e-14

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
C1QC PREDICTED: complement C1q subcomponent subunit C isoform 1 [Sus scrofa]. 340 6e-94 O

LOC100518846 PREDICTED: complement C1q subcomponent subunit B-like [Sus scrofa]. 122 4e-28 O

C1QA complement C1q subcomponent subunit A precursor [Sus scrofa]. 95.1 6e-20 O

LOC100520210 PREDICTED: complement C1q tumor necrosis factor-related protein 5-like [Sus scrofa]. 95.1 6e-20 O

LOC100522569 PREDICTED: complement C1q tumor necrosis factor-related protein 9A-like [Sus scrofa]. 92.8 3e-19

ADIPOQ adiponectin [Sus scrofa]. 86.7 2e-17 O

C1QTNF2 complement C1q tumor necrosis factor-related protein 2 [Sus scrofa]. 83.2 1e-16 O

LOC100623195 PREDICTED: otolin-1-like [Sus scrofa]. 80.5 1e-15

LOC100623105 PREDICTED: otolin-1-like [Sus scrofa]. 80.5 1e-15

COL10A1 collagen alpha-1(X) chain [Sus scrofa]. 79.7 3e-15

Locus	Definition	Score	E value	FL
C1QC	PREDICTED: complement C1q subcomponent subunit C isoform 1 [Sus scrofa].	340	6e-94	O
LOC100518846	PREDICTED: complement C1q subcomponent subunit B-like [Sus scrofa].	122	4e-28	O
C1QA	complement C1q subcomponent subunit A precursor [Sus scrofa].	95.1	6e-20	O
LOC100520210	PREDICTED: complement C1q tumor necrosis factor-related protein 5-like [Sus scrofa].	95.1	6e-20	O
LOC100522569	PREDICTED: complement C1q tumor necrosis factor-related protein 9A-like [Sus scrofa].	92.8	3e-19
ADIPOQ	adiponectin [Sus scrofa].	86.7	2e-17	O
C1QTNF2	complement C1q tumor necrosis factor-related protein 2 [Sus scrofa].	83.2	1e-16	O
LOC100623195	PREDICTED: otolin-1-like [Sus scrofa].	80.5	1e-15
LOC100623105	PREDICTED: otolin-1-like [Sus scrofa].	80.5	1e-15
COL10A1	collagen alpha-1(X) chain [Sus scrofa].	79.7	3e-15

Assembly Members: 5 TOP

Library Plate Loc. Read Name Accession Full Seq.

SPL01 0008 A02 SPL01_0008_A02.b BP156709 AK237170
SPL01 0029 A10 SPL01_0029_A10.b CJ016211
SPL01 0075 E07 SPL01_0075_E07.b CJ019776
SPL01 0083 A03 SPL01_0083_A03.b CJ020458
SPL01 0096 E07 SPL01_0096_E07.b CJ021670

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
364 C 2 0 0.400 W S AAC/N
T 3 0 0.600 AAT/N

Alignment: TOP

20110601C-001361 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
SPL01_0008_A02.b : ccttttggtggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0075_E07.b :      nnnnggctaggacttanacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0096_E07.b :         nnnnggctaggactatnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0029_A10.b :                 nggggggctggacttgacagtttgtcxxxxxxxxxxxxxxxxxx
SPL01_0083_A03.b :                                        ntttggctagtacttanacxx


20110601C-001361 : ..........................TCCACTCCGACTCGGTGTCCTCCTGCCTTGGAGA
                   ---------+---------+---------+---------+---------+---------+ 34
SPL01_0008_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxTCCACTCCGACTCGGTGTCTTCCTGCCTTGGAGA
SPL01_0075_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxTCCACTCCGACTCGGTGTCCTCCTGCCTTGGAGA
SPL01_0096_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCCGACTCGGTGTCTTCCTGCCTTGGAGA
SPL01_0029_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGACTCGGTGTCCTCCTGCCTTGGAGA
SPL01_0083_A03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-001361 : AGAAAAGCAGACCTGAGGACATCCTGTGACCAGACCAGAAACCTCCCACCTGTCCAGCTC
                   ---------+---------+---------+---------+---------+---------+ 94
SPL01_0008_A02.b : AGAAAAGCAGACCTGAGGACATCCTGTGACCAGACCAGAAACCTCCCACCTGTCCAGCTC
SPL01_0075_E07.b : AGAAAAGCAGACCTGAGGACATCCTGTGACCAGACCAGAAACCTCCCACCTGTCCAGCTC
SPL01_0096_E07.b : AGAAAAGCAGACCTGAGGACATCCTGTGACCAGACCAGAAACCTCCCACCTGTCCAGCTC
SPL01_0029_A10.b : AGAAAAGCAGACCTGAGGACATCCTGTGACCAGACCAGAAACCTCCCACCTGTCCAGCTC
SPL01_0083_A03.b : xxxxxxGCAGACCTGAGGACATCCTGTGACCAGACCAGAAACCTCCCACCTGTCCAGCTC


20110601C-001361 : CTTCCCCAGATGGACATGGGGTCCAGCTCCTGGCCCCTTCTGGTACTAAACCTACTGCTG
                   ---------+---------+---------+---------+---------+---------+ 154
SPL01_0008_A02.b : CTTCCCCAGATGGACATGGGGTCCAGCTCCTGGCCCCTTCTGGTACTAAACCTACTGCTG
SPL01_0075_E07.b : CTTCCCCAGATGGACATGGGGTCCAGCTCCTGGCCCCTTCTGGTACTAAACCTACTGCTG
SPL01_0096_E07.b : CTTCCCCAGATGGACATGGGGTCCAGCTCCTGGCCCCTTCTGGTACTAAACCTACTGCTG
SPL01_0029_A10.b : CTTCCCCAGATGGACATGGGGTCCAGCTCCTGGCCCCTTCTGGTACTAAACCTACTGCTG
SPL01_0083_A03.b : CTTCCCCAGATGGACATGGGGTCCAGCTCCTGGCCCCTTCTGGTACTAAACCTACTGCTG


20110601C-001361 : CTTCTACTGGCACTGCCACTTGAAGGCCAGGACAACTTAAGATGCCATGGGATCCCTGGG
                   ---------+---------+---------+---------+---------+---------+ 214
SPL01_0008_A02.b : CTTCTACTGGCACTGCCACTTGAAGGCCAGGACAACTTAAGATGCCATGGGATCCCTGGG
SPL01_0075_E07.b : CTTCTACTGGCACTGCCACTTGAAGGCCAGGACAACTTAAGATGCCATGGGATCCCTGGG
SPL01_0096_E07.b : CTTCTACTGGCACTGCCACTTGAAGGCCAGGACAACTTAAGATGCCATGGGATCCCTGGG
SPL01_0029_A10.b : CTTCTACTGGCACTGCCACTTGAAGGCCAGGACGACTTAAGATGCCATGGGATCCCTGGG
SPL01_0083_A03.b : CTTCTACTGGCACTGCCACTTGAAGGCCAGGACAACTTAAGATGCCATGGGATCCCTGGG


20110601C-001361 : ATACCGGGCCTGCCTGGGGCCCCCGGGAAGGATGGGCATGATGGACTGCCAGGGCCCAAG
                   ---------+---------+---------+---------+---------+---------+ 274
SPL01_0008_A02.b : ATACCGGGCCTGCCTGGGGCCCCCGGGAAGGATGGGCATGATGGACTGCCAGGGCCCAAG
SPL01_0075_E07.b : ATACCGGGCCTGCCTGGGGCCCCCGGGAAGGATGGGCATGATGGACTGCCAGGGCCCAAG
SPL01_0096_E07.b : ATACCGGGCCTGCCTGGGGCCCCCGGGAAGGATGGGCATGATGGACTGCCAGGGCCCAAG
SPL01_0029_A10.b : ATACCGGGCCTGCCTGGGGCCCCCGGGAAGGATGGGCATGATGGACTGCCAGGGCCCAAG
SPL01_0083_A03.b : ATACCGGGCCTGCCTGGGGCCCCCGGGAAGGATGGGCATGATGGACTGCCAGGGCCCAAG


20110601C-001361 : GGTGAGCCAGGAATCCCAGCTATCCCTGGGACACGTGGACCCAAGGGTGAGAAGGGAGAT
                   ---------+---------+---------+---------+---------+---------+ 334
SPL01_0008_A02.b : GGTGAGCCAGGAATCCCAGCTATCCCTGGGACACGTGGACCCAAGGGTGAGAAGGGAGAT
SPL01_0075_E07.b : GGTGAGCCAGGAATCCCAGCTATCCCTGGGACACGTGGACCCAAGGGTGAGAAGGGAGAT
SPL01_0096_E07.b : GGTGAGCCAGGAATCCCAGCTATCCCTGGGACACGTGGACCCAAGGGTGAGAAGGGAGAT
SPL01_0029_A10.b : GGTGAGCCAGGAATCCCAGCTATCCCTGGGACACGTGGACCCAAGGGTGAGAAGGGAGAT
SPL01_0083_A03.b : GGTGAGCCAGGAATCCCAGCTATCCCTGGGACACGTGGACCCAAGGGTGAGAAGGGAGAT


20110601C-001361 : CCCGGCAAACCTGGCCTTCCTGGAAAAAATGGTCCCATGGGAACCCCTGGGATTCCAGGG
                   ---------+---------+---------+---------+---------+---------+ 394
SPL01_0008_A02.b : CCCGGCAAACCTGGCCTTCCTGGAAAAAATGGTCCCATGGGAACCCCTGGGATTCCAGGG
SPL01_0075_E07.b : CCCGGCAAACCTGGCCTTCCTGGAAAAAACGGTCCCATGGGAACCCCTGGGATTCCAGGG
SPL01_0096_E07.b : CCCGGCAAACCTGGCCTTCCTGGAAAAAATGGTCCCATGGGAACCCCTGGGATTCCAGGG
SPL01_0029_A10.b : CCCGGCAAACCTGGCCTTCCTGGAAAAAACGGTCCCATGGGAACCCCTGGGATTCCAGGG
SPL01_0083_A03.b : CCCGGCAAACCTGGCCTTCCTGGAAAAAATGGTCCCATGGGAACCCCTGGGATTCCAGGG


20110601C-001361 : ACTCCCGGAGTCATGGGACCCCGTGGGGAGCCGGGTGAGGAGGGAAGATATAAGCAGAAG
                   ---------+---------+---------+---------+---------+---------+ 454
SPL01_0008_A02.b : ACTCCCGGAGTCATGGGACCCCGTGGGGAGCCGGGTGAGGAGGGAAGATATAAGCAGAAG
SPL01_0075_E07.b : ACTCCCGGAGTCATGGGACCCCGTGGGGAGCCGGGTGAGGAGGGAAGATATAAGCAGAAG
SPL01_0096_E07.b : ACTCCCGGAGTCATGGGACCCCGTGGGGAGCCGGGTGAGGAGGGAAGATATAAGCAGAAG
SPL01_0029_A10.b : ACTCCCGGAGTCATGGGACCCCGTGGGGAGCCGGGTGAGGAGGGAAGATATAAGCAGAAG
SPL01_0083_A03.b : ACTCCCGGAGTCATGGGACCCCGTGGGGAGCCGGGTGAGGAGGGAAGATATAAGCAGAAG


20110601C-001361 : CACCAGTCAGTGTTCTCCGTCACACGGCAGACGGCCCAGTACCCAGCGGCCAACAGCTTG
                   ---------+---------+---------+---------+---------+---------+ 514
SPL01_0008_A02.b : CACCAGTCAGTGTTCTCCGTCACACGGCAGACGGCCCAGTACCCAGCGGCCAACAGCTTG
SPL01_0075_E07.b : CACCAGTCAGTGTTCTCCGTCACACGGCAGACGGCCCAGTACCCAGCGGCCAACAGCTTG
SPL01_0096_E07.b : CACCAGTCAGTGTTCTCCGTCACACGGCAGACGGCCCAGTACCCAGCGGCCAACAGCTTG
SPL01_0029_A10.b : CACCAGTCAGTGTTCTCCGTCACACGGCAGACGGCCCAGTACCCAGCGGCCAACAGCTTG
SPL01_0083_A03.b : CACCAGTCAGTGTTCTCCGTCACACGGCAGACGGCCCAGTACCCAGCGGCCAACAGCTTG


20110601C-001361 : GTCAAGTTCAACAACGTCATCACCAACCCGCAGGGGGATTATGACATCAACACTGGCAAG
                   ---------+---------+---------+---------+---------+---------+ 574
SPL01_0008_A02.b : GTCAAGTTCAACAACGTCATCACCAACCCGCAGGGGGATTATGACATCAACACTGGCAAG
SPL01_0075_E07.b : GTCAAGTTCAACAACGTCATCACCAACCCGCAGGGGGATTATGACATCAACACTGGCAAG
SPL01_0096_E07.b : GTCAAGTTCAACAACGTCATCACCAACCCGCAGGGGGATTATGACATCAACACTGGCAAG
SPL01_0029_A10.b : GTCAAGTTCAACAACGTCATCACCAACCCGCAGGGGGATTATGACATCAACACTGGCAAG
SPL01_0083_A03.b : GTCAAGTTCAACAACGTCATCACCAACCCGCAGGGGGATTATGACATCAACACTGGCAAG


20110601C-001361 : TTCACCTGCAAAGTCCCCGGCCTCTACTACTTTGTCTACTACACATCACACACGGCCAAC
                   ---------+---------+---------+---------+---------+---------+ 634
SPL01_0008_A02.b : TTCACCTGCAAAGTCCCCGGCCTCTACTACTTTGTCTACTACACATCACACACGGCCAAC
SPL01_0075_E07.b : TTCACCTGCAAAGTCCCCGGCCTCTACTACTTTGTCTACTACACATCACACACGGCCAAC
SPL01_0096_E07.b : TTCACCTGCAAAGTCCCCGGCCTCTACTACTTTGTCTACTACACATCACACACGGCCAAC
SPL01_0029_A10.b : TTCACCTGCAAAGTCCCCGGCCTCTACTACTTTGTCTACTACACATCACACACGGCCAAC
SPL01_0083_A03.b : TTCACCTGCAAAGTCCCCGGCCTCTACTACTTTGTCTACTACACATCACACACGGCCAAC


20110601C-001361 : CTGTGTATGCTGCTCTACCGCAACGGCTTCAAGGTGATCACCTTCTGTGACCACATGTCT
                   ---------+---------+---------+---------+---------+---------+ 694
SPL01_0008_A02.b : CTGTGTATGCTGCTCTACCGCAACGGCTTCAAGGTGATCACCTTCTGTGACCACATGTCT
SPL01_0075_E07.b : CTGTGTATGCTGCTCTACCGCAACGGCTTCAAGGTGATCACCTTCTGTGACCACATGTCT
SPL01_0096_E07.b : CTGTGTATGCTGCTCTACCGCAACGGCTTCAAGGTGATCACCTTCTGTGACCACATGTCT
SPL01_0029_A10.b : CTGTGTATGCAGCTCTACCGCAACGGCTTCAAGGTGATCACCTTCTGTGACCACATGTCT
SPL01_0083_A03.b : CTGTGTATGCTGCTCTACCGCAACGGCTTCAAGGTGATCACCTTCTGTGACCACATGTCT


20110601C-001361 : AATAGCAAGCAGGTCAGCTCGGGCGGTGTGCTGTTGCGGCTGCAGGAGGGCGAGCAGGTG
                   ---------+---------+---------+---------+---------+---------+ 754
SPL01_0008_A02.b : AATAGCAAGCAGGTCAGCTCGGGCGGTGTGCTGTTGCGGCTGCAGGAGGGCGAGCAGGTG
SPL01_0075_E07.b : AATAGCAAGCAGGTCAGCTCGGGCGGTGTGCTGTTGCGGCTGCAGGAGGGCGAGCAGGTG
SPL01_0096_E07.b : AATAGCAAGCAGGTCAGCTCGGGCGGTGTGCTGTTGCGGCTGCAGGAGGGCGAGCAGGTG
SPL01_0029_A10.b : AATAGCAAGCAGGTCAGCTCGGGCGGTGTGCTGTTGCGGCTGCAGGAAGGCGAGCAAGTG
SPL01_0083_A03.b : AATAGCAAGCAGGTCAGCTCGGGCGGTGTGCTGTTGCGGCTGCAGGAGGGCGAGCANGTG


20110601C-001361 : TGGCTGGGAGTCAACGACTACAATGGCCTGGTGGGCATGGAGGGCTCCGACAGCATCTTC
                   ---------+---------+---------+---------+---------+---------+ 814
SPL01_0008_A02.b : TGGCTGGGAGTCAACGACTACAATGGCCTGGTGGGCATGGAGGGCTCCGACAGCATCTTC
SPL01_0075_E07.b : TGGCTGGGAGTCAACGACTACAATGGCCTGGTGGGCATGGAGGGCTCCGACAGCATCTTC
SPL01_0096_E07.b : TGGCTGGGAGTCAACGACTACAATGGCCTGGTGGGCATGGAGGGCTCCGACAGCATCTTC
SPL01_0029_A10.b : TGGCTGGGAGTCAACGACTACAATGGCCTGTTGGGCATGAAGGGGTCCGACAGCATCTTC
SPL01_0083_A03.b : TGGCTGGGAGTCAACGACTACNATGGCCTGGTGGGCATGGAGGGCTCCGACAGCATCTTC


20110601C-001361 : TCCGGCTTCTTGCTCTTCCCTAACTA*GGGCGGGCAGGCCTGCTCCCACCCTGGGG*CCA
                   ---------+---------+---------+---------+---------+---------+ 872
SPL01_0008_A02.b : TCCGGCTTCTTGCTCTTCCCTAACTA*GGGCGGGCAGGCCTGCTCCCACCCTGGGG*CCA
SPL01_0075_E07.b : TCCGGCTTCTTGCTCTTCCCCTACTA*GGGCGGGCAGGCCTGCTCCCACCCTGGGG*CCA
SPL01_0096_E07.b : TCCGGCTTCTTGCTCTTCCCTAACTA*GGGCGGGGCAGCCTGCTCCCCACCTGGGG*CCA
SPL01_0029_A10.b : TCCGGCTTCTTGCTCTTCCCTAACTAGGGGCGGGCAGGCCTGCTCCCACCCTGGGGGCCC
SPL01_0083_A03.b : TCCGGCTTCTTGCTCTTCCCTAACTA*GGGCGGGCAGGCCTGCTCCCACCCTGGGG*CCA


20110601C-001361 : CCCCACCTCCCTCAGCTTTCCCGCAAGAGCCTGCTGTGCCACATCCTTGCTCAGGCCATT
                   ---------+---------+---------+---------+---------+---------+ 932
SPL01_0008_A02.b : CCCCA*CTCCCTCAGCTTTCCCGCAAGAGCCTGCTGTGCCACATCCTTGCTCAGGCCCTT
SPL01_0075_E07.b : CCCCACCTCCCTCAGCTTTCCCGCAAGAGCCTGCTGTGCCACATCCTTGCTCAGGCCATT
SPL01_0096_E07.b : CCCCACCTCCCTCAGCTTTCCCGCA*GAGCCTGCTGTGCCACATCCTTGCTCAGG*CATT
SPL01_0029_A10.b : CCCCACCTCCCCTCACTTTTCCGCAAGAACCTGCTGTTGCCAATCCTTGCTCAGGCCATT
SPL01_0083_A03.b : CCCCACCTCCCTCAGCTTTCCCGCAAGAGCCTGCTGTGCCACATCCTTGCTCAGGCCA*T


20110601C-001361 : CTCGCCACTGGATGGACTCCTCCTCCAGGAAGCCACCCTGCCATCCTACCCCATGAATTC
                   ---------+---------+---------+---------+---------+---------+ 992
SPL01_0008_A02.b : CTCGCCACTGGATGGACTTCTCCTCCAGAAACCCACCCTGCCATCCTAACCCATGAATTC
SPL01_0075_E07.b : CTCGCCACTGGATGGACTCCTCCTCAGGGAGCCCACCCTGCCATCCTACCCCATGAATTC
SPL01_0096_E07.b : CTCGCCACTGGATGGACTCCCTCTCCAGGAAGCCCCCCTGCCATCCTACCCCATGAGTTC
SPL01_0029_A10.b : CTCGCCACTGAATGGACTCCTCTTCCAGAAAGCCAACCTGCCATCCTAACCCATtgattc
SPL01_0083_A03.b : CTCGCCACTGGATGGACTCCTCCTCCAGGAAGCCACCCTGCCATCCTACCCCATGAAGTC


20110601C-001361 : TCGCCCTCCTC*TGAACTCCTTCAGTAGTCCCTGCTTTGAAACTTAACCGACACTTTCGG
                   ---------+---------+---------+---------+---------+---------+ 1051
SPL01_0008_A02.b : TCGCCCTCCTC*TGAACTCCTTtcagaagtccttgcttttaaactttaa          
SPL01_0075_E07.b : TCGCCCTCCTCCTGAACTCCTTCAGTAGTCCCTGCTTTGAAACTTAACCGACACTTTCTG
SPL01_0096_E07.b : TCCCCCTCCTC*TGAACTTCTTCAGTAGTCACTGCTTTGATACTTAACCGACcttttcgg
SPL01_0029_A10.b : ccgccctcccccgaacccctccgtaattcactgcttttaaaacttaacgaaactttcggg
SPL01_0083_A03.b : TCGCCNTCCTC*TGAACTCCCTCAGTAATCCCGGCTTTGATAACTTACCCAAACTTTCGG


20110601C-001361 : GGACTGTCATTAATTTC...........................................
                   ---------+---------+---------+---------+---------+---------+ 1068
SPL01_0008_A02.b :                                                             
SPL01_0075_E07.b : GGACTGTCATTt                                               
SPL01_0096_E07.b : gaacggcattaagttctttccagtcctggaaaaggcagggaaattcctaaaaatccgtca
SPL01_0029_A10.b : aaggtcattaatttcttcccaaccttggaaaaggccggaaattcctaaataaccgtccac
SPL01_0083_A03.b : GTACTGTCATTAATTTCctttcaaagccttggaaaaggcggggggatttcctaaaaaatc


20110601C-001361 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1068
SPL01_0008_A02.b :                                                             
SPL01_0075_E07.b :                                                             
SPL01_0096_E07.b : a                                                          
SPL01_0029_A10.b : caaaaaaaaaaaaaaaaaaggcc                                    
SPL01_0083_A03.b : cgtccccacataaaaaaaaaaaa