[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-002421
Length:
941
Sequence:
[FASTA format sequence]
GGGTGTCTGC TTCCTGGCTG CGCTCGGTGG CTTCTGCTTG AGGACTGCTG ATAGCAATAT
GTCTTCAGGA AATGCCAAAA TTGGGCACCG TGCCCCCCAC TTCAAAGCAA CTGCTGTTAT
GCCAGATGGT CAGTTCAAAG ATATCAGCCT ATCTGACTAC AAAGGAAAAT ACGTGGTGTT
CTTCTTTTAC CCACTTGACT TCACCTTTGT GTGCCCCACG GAGATCATTG CTTTCAGTGA
GAGGGCAGAA GAATTTAAGA AACTCAACTG CCAAGTGATT GGTGCTTCTG TGGATTCTCA
CTTCTGTCAT CTGGCCTGGA TCAACACCCC CAAGAAGCAA GGAGGACTGG GACCCATGAA
CATTCCCTTG ATATCAGACC CCAAGCGCAC CATTGCGCAG GACTACGGGG TCTTGAAGGC
CGACGAAGGC ATCTCATTCA GGGGCCTTTT TATCATTGAC GATAAAGGTA TTCTTCGACA
GATCACCATA AATGACCTTC CTGTTGGCCG CTCCGTGGAT GAGACTCTGA GACTAGTTCA
GGCCTTCCAG TTCACTGATA AACATGGGGA AGTGTGCCCG GCTGGTTGGA AGCCTGGCAG
TGATACCATC AAGCCTGATG TCCAGAAGAG CAAAGAATAT TTCTCTAAAC AGAAGTGAGC
GCTGGGCCAT CTCAGGGCCA GGCGGCAGTG GGTGTCCATG AGAACAACGT CTTTTGTACT
ATTGTCATGC TTAAAACACA AGACCTTATA CTCAGCTCAG GTGTGTGGGA CAGGACAGGC
CTTTCTTGCA GGGGTTAGGG AGGCCATACT TTTCTTCCTC GGGAAGAAAT GGCCTGCGCT
TTAATTACGT GGCAGGCCAA CTGGTGTGTC AGTAGCAGGG TTTCACTTTT GACCTTTTGT
AGTTCCTATT AACCTGAACT GAAAAAAAAA AAAAAAAAAA A
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | PRDX1 | peroxiredoxin-1 [Homo sapiens]. | 404 | e-113 | O |
|
| PRDX1 | peroxiredoxin-1 [Homo sapiens]. | 404 | e-113 | O |
|
| PRDX1 | peroxiredoxin-1 [Homo sapiens]. | 404 | e-113 | O |
|
| PRDX1 | peroxiredoxin-1 [Homo sapiens]. | 404 | e-113 | O |
|
| PRDX2 | peroxiredoxin-2 isoform a [Homo sapiens]. | 327 | 7e-90 | O |
|
| PRDX4 | peroxiredoxin-4 [Homo sapiens]. | 288 | 5e-78 | |
|
| PRDX3 | thioredoxin-dependent peroxide reductase, mitochondrial isoform b [Homo sapiens]. | 267 | 9e-72 | |
|
| PRDX3 | thioredoxin-dependent peroxide reductase, mitochondrial isoform a precursor [Homo sapiens]. | 265 | 5e-71 | |
|
| PRDX2 | peroxiredoxin-2 isoform c [Homo sapiens]. | 140 | 1e-33 | O |
|
| PRDX6 | peroxiredoxin-6 [Homo sapiens]. | 79.3 | 5e-15 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Prdx1 | peroxiredoxin-1 [Mus musculus]. | 395 | e-110 | O |
|
| Prdx2 | peroxiredoxin-2 [Mus musculus]. | 321 | 6e-88 | O |
|
| LOC100504815 | PREDICTED: peroxiredoxin-2-like [Mus musculus]. | 303 | 2e-82 | O |
|
| Prdx4 | peroxiredoxin-4 [Mus musculus]. | 287 | 7e-78 | |
|
| Prdx3 | thioredoxin-dependent peroxide reductase, mitochondrial precursor [Mus musculus]. | 265 | 5e-71 | |
|
| Prdx6-ps1 | peroxiredoxin 6, related sequence 1 [Mus musculus]. | 82.4 | 5e-16 | O |
|
| Prdx6 | peroxiredoxin-6 [Mus musculus]. | 80.1 | 2e-15 | O |
|
| LOC677654 | PREDICTED: peroxiredoxin-6-like, partial [Mus musculus]. | 77.8 | 1e-14 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC475375 | PREDICTED: similar to peroxiredoxin 1 [Canis familiaris]. | 404 | e-113 | O |
|
| LOC475156 | PREDICTED: similar to peroxiredoxin 1 isoform 1 [Canis familiaris]. | 372 | e-103 | O |
|
| LOC484926 | PREDICTED: similar to Peroxiredoxin 2 (Thioredoxin peroxidase 1) (Thioredoxin-dependent peroxide reductase 1) (Thiol-specific antioxidant protein) (TSA) (PRP) (Natural killer cell enhancing factor B) (NKEF-B) isoform 1 [Canis familiaris]. | 320 | 2e-87 | O |
|
| LOC484926 | PREDICTED: similar to Peroxiredoxin 2 (Thioredoxin peroxidase 1) (Thioredoxin-dependent peroxide reductase 1) (Thiol-specific antioxidant protein) (TSA) (PRP) (Natural killer cell enhancing factor B) (NKEF-B) isoform 2 [Canis familiaris]. | 320 | 2e-87 | O |
|
| LOC491776 | PREDICTED: similar to Peroxiredoxin 4 (Prx-IV) (Thioredoxin peroxidase AO372) (Thioredoxin-dependent peroxide reductase A0372) (Antioxidant enzyme AOE372) (AOE37-2) isoform 1 [Canis familiaris]. | 286 | 1e-77 | |
|
| LOC491776 | PREDICTED: similar to peroxiredoxin 4 isoform 3 [Canis familiaris]. | 281 | 5e-76 | |
|
| LOC477839 | PREDICTED: similar to Thioredoxin-dependent peroxide reductase, mitochondrial precursor (Peroxiredoxin 3) (Antioxidant protein 1) (AOP-1) (MER5 protein homolog) (HBC189) (PRX III) isoform 1 [Canis familiaris]. | 264 | 1e-70 | |
|
| LOC611135 | PREDICTED: similar to Thioredoxin-dependent peroxide reductase, mitochondrial precursor (Peroxiredoxin 3) (Antioxidant protein 1) (AOP-1) (MER5 protein homolog) (HBC189) (PRX III) [Canis familiaris]. | 256 | 2e-68 | |
|
| LOC477839 | PREDICTED: similar to Thioredoxin-dependent peroxide reductase, mitochondrial precursor (Peroxiredoxin 3) (Antioxidant protein 1) (AOP-1) (MER5 protein homolog) (HBC189) (PRX III) isoform 2 [Canis familiaris]. | 256 | 3e-68 | |
|
| LOC608154 | PREDICTED: similar to Thioredoxin-dependent peroxide reductase, mitochondrial precursor (Peroxiredoxin 3) (Antioxidant protein 1) (AOP-1) (MER5 protein homolog) (HBC189) (PRX III) [Canis familiaris]. | 241 | 5e-64 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| PRDX1 | peroxiredoxin-1 [Bos taurus]. | 403 | e-112 | O |
|
| PRDX2 | peroxiredoxin-2 [Bos taurus]. | 313 | 2e-85 | O |
|
| PRDX4 | peroxiredoxin-4 [Bos taurus]. | 282 | 3e-76 | |
|
| PRDX3 | thioredoxin-dependent peroxide reductase, mitochondrial precursor [Bos taurus]. | 264 | 1e-70 | |
|
| LOC786533 | PREDICTED: peroxiredoxin-6-like [Bos taurus]. | 83.6 | 2e-16 | O |
|
| LOC786533 | PREDICTED: peroxiredoxin-6-like isoform 1 [Bos taurus]. | 83.2 | 3e-16 | O |
|
| PRDX6 | peroxiredoxin-6 [Bos taurus]. | 82.4 | 5e-16 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC100512476 | PREDICTED: peroxiredoxin-1-like isoform 5 [Sus scrofa]. | 389 | e-108 | O |
|
| LOC100512476 | PREDICTED: peroxiredoxin-1-like isoform 4 [Sus scrofa]. | 386 | e-107 | O |
|
| LOC100512476 | PREDICTED: peroxiredoxin-1-like isoform 3 [Sus scrofa]. | 386 | e-107 | O |
|
| LOC100512476 | PREDICTED: peroxiredoxin-1-like isoform 2 [Sus scrofa]. | 386 | e-107 | O |
|
| LOC100512476 | PREDICTED: peroxiredoxin-1-like isoform 1 [Sus scrofa]. | 386 | e-107 | O |
|
| LOC100512521 | PREDICTED: peroxiredoxin-2-like [Sus scrofa]. | 317 | 5e-87 | O |
|
| PRDX4 | PREDICTED: peroxiredoxin-4 [Sus scrofa]. | 288 | 4e-78 | |
|
| LOC100154143 | PREDICTED: thioredoxin-dependent peroxide reductase, mitochondrial isoform 1 [Sus scrofa]. | 267 | 7e-72 | |
|
| PRDX6 | peroxiredoxin-6 [Sus scrofa]. | 84 | 1e-16 | O |
|
| LOC100516822 | PREDICTED: peroxiredoxin-6-like [Sus scrofa]. | 53.9 | 1e-07 | O |
|
Assembly Members: 10
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
20110601C-002421 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
SPLT1_0058_A12.b : nngggcgagtacacgxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0057_G08.b : nnggccggtagaggxxxxxxxxxxxxxxxxxxxxxxxx
HTMT1_0018_A08.b : tttttcgacagtagaggxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0122_D06.b : nnnnccgttagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0044_E05.b : nngggtgaacaxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0023_C10.b : natgaacaxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0078_G02.b : nnnggctaggaatatgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
HTMT1_0102_B03.b : ttttccgaggttagacgxxxxxxxxxxxxxxxxxxxx
ILNT1_0026_C11.b : nnnnccgaggtagaggcagtagtattaaxxxxxxxxxx
HTMT1_0144_C09.b : ntttcatttttnnnncgagagtacacgxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-002421 : .................GGGTGTCTGCTTCCTGGCTGCGCTCGGTGGCTTCTGCTTGAGG
---------+---------+---------+---------+---------+---------+ 43
SPLT1_0058_A12.b : xxxxxxxxxxxxxxxxxGGGTGTCTGCTTCCTGGCTGCGCTCGGTGGCTTCTGCTTGAGG
SPLT1_0057_G08.b : xxxxxxxxxxxxxxxxxxGGTGTCTGCTTCCTGGCTGCGCTCGGTGGCTTCTGCTTGAGG
HTMT1_0018_A08.b : xxxxxxxxxxxxxxxxxxGGTGTCTGCTTCCTGGCTGCGCTCGGTGGCTTCTGCTTGAGG
CLNT1_0122_D06.b : xxxxxxxxxxxxxxxxxxxGTGTCTGCTTCCTGGCTGCGCTCGGTGGCTTCTGCTTGAGG
ITT01_0044_E05.b : xxxxxxxxxxxxxxxxxxxGTGTCTGCTTCCTGGCTCCGCTCGGTGGCTTCTGCTTGAGG
PBL01_0023_C10.b : xxxxxxxxxxxxxxxxxxxGTGTCTGCTTCCTGGCTCCGCTCGGTGGCTTCTGCTTGAGG
MLN01_0078_G02.b : xxxxxxxxxxxxxxxxxxxGTGTCTGCTTCCTGGCTCCGCTCGGTGGCTTCTGCTTGAGG
HTMT1_0102_B03.b : xxxxxxxxxxxxxxxxxxxxGGTCTGCTTCCTGGCTGCGCTCGGTGGCTTCTGCTTGAGG
ILNT1_0026_C11.b : xxxxxxxxxxxxxxxxxxxxGGTCTGCTTCCTGGCTGCGCTCGGTGGCTTCTGCTTGAGG
HTMT1_0144_C09.b : xxxxxxxxxxxxxxxxxxxxGGTCTGCTTCCTGGCTGCGCTCGGTGGCTTCTGCTTGAGG
20110601C-002421 : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
---------+---------+---------+---------+---------+---------+ 103
SPLT1_0058_A12.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
SPLT1_0057_G08.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
HTMT1_0018_A08.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
CLNT1_0122_D06.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
ITT01_0044_E05.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
PBL01_0023_C10.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
MLN01_0078_G02.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
HTMT1_0102_B03.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
ILNT1_0026_C11.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
HTMT1_0144_C09.b : ACTGCTGATAGCAATATGTCTTCAGGAAATGCCAAAATTGGGCACCGTGCCCCCCACTTC
20110601C-002421 : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCCTATCTGACTACAAA
---------+---------+---------+---------+---------+---------+ 163
SPLT1_0058_A12.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCCTATCTGACTACAAA
SPLT1_0057_G08.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCCTATCTGACTACAAA
HTMT1_0018_A08.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCCTATCTGACTACAAA
CLNT1_0122_D06.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCCTATCTGACTACAAA
ITT01_0044_E05.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCTTATCTGACTACAAA
PBL01_0023_C10.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCTTATCTGACTACAAA
MLN01_0078_G02.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCTTATCTGACTACAAA
HTMT1_0102_B03.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCCTATCTGACTACAAA
ILNT1_0026_C11.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCCTATCTGACTACAAA
HTMT1_0144_C09.b : AAAGCAACTGCTGTTATGCCAGATGGTCAGTTCAAAGATATCAGCCTATCTGACTACAAA
20110601C-002421 : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
---------+---------+---------+---------+---------+---------+ 223
SPLT1_0058_A12.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
SPLT1_0057_G08.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
HTMT1_0018_A08.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
CLNT1_0122_D06.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
ITT01_0044_E05.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
PBL01_0023_C10.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
MLN01_0078_G02.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
HTMT1_0102_B03.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
ILNT1_0026_C11.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
HTMT1_0144_C09.b : GGAAAATACGTGGTGTTCTTCTTTTACCCACTTGACTTCACCTTTGTGTGCCCCACGGAG
20110601C-002421 : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
---------+---------+---------+---------+---------+---------+ 283
SPLT1_0058_A12.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
SPLT1_0057_G08.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
HTMT1_0018_A08.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
CLNT1_0122_D06.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
ITT01_0044_E05.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
PBL01_0023_C10.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
MLN01_0078_G02.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
HTMT1_0102_B03.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
ILNT1_0026_C11.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
HTMT1_0144_C09.b : ATCATTGCTTTCAGTGAGAGGGCAGAAGAATTTAAGAAACTCAACTGCCAAGTGATTGGT
20110601C-002421 : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
---------+---------+---------+---------+---------+---------+ 343
SPLT1_0058_A12.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
SPLT1_0057_G08.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
HTMT1_0018_A08.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
CLNT1_0122_D06.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
ITT01_0044_E05.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
PBL01_0023_C10.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
MLN01_0078_G02.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
HTMT1_0102_B03.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
ILNT1_0026_C11.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
HTMT1_0144_C09.b : GCTTCTGTGGATTCTCACTTCTGTCATCTGGCCTGGATCAACACCCCCAAGAAGCAAGGA
20110601C-002421 : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
---------+---------+---------+---------+---------+---------+ 403
SPLT1_0058_A12.b : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
SPLT1_0057_G08.b : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
HTMT1_0018_A08.b : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
CLNT1_0122_D06.b : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
ITT01_0044_E05.b : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
PBL01_0023_C10.b : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
MLN01_0078_G02.b : GGACTGGGACCCATGAACACTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
HTMT1_0102_B03.b : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
ILNT1_0026_C11.b : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
HTMT1_0144_C09.b : GGACTGGGACCCATGAACATTCCCTTGATATCAGACCCCAAGCGCACCATTGCGCAGGAC
20110601C-002421 : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
---------+---------+---------+---------+---------+---------+ 463
SPLT1_0058_A12.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
SPLT1_0057_G08.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
HTMT1_0018_A08.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
CLNT1_0122_D06.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
ITT01_0044_E05.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
PBL01_0023_C10.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
MLN01_0078_G02.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
HTMT1_0102_B03.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
ILNT1_0026_C11.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
HTMT1_0144_C09.b : TACGGGGTCTTGAAGGCCGACGAAGGCATCTCATTCAGGGGCCTTTTTATCATTGACGAT
20110601C-002421 : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
---------+---------+---------+---------+---------+---------+ 523
SPLT1_0058_A12.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
SPLT1_0057_G08.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
HTMT1_0018_A08.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
CLNT1_0122_D06.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
ITT01_0044_E05.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
PBL01_0023_C10.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
MLN01_0078_G02.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
HTMT1_0102_B03.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
ILNT1_0026_C11.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
HTMT1_0144_C09.b : AAAGGTATTCTTCGACAGATCACCATAAATGACCTTCCTGTTGGCCGCTCCGTGGATGAG
20110601C-002421 : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
---------+---------+---------+---------+---------+---------+ 583
SPLT1_0058_A12.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
SPLT1_0057_G08.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
HTMT1_0018_A08.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
CLNT1_0122_D06.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
ITT01_0044_E05.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
PBL01_0023_C10.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCTGGCT
MLN01_0078_G02.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
HTMT1_0102_B03.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
ILNT1_0026_C11.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
HTMT1_0144_C09.b : ACTCTGAGACTAGTTCAGGCCTTCCAGTTCACTGATAAACATGGGGAAGTGTGCCCGGCT
20110601C-002421 : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
---------+---------+---------+---------+---------+---------+ 643
SPLT1_0058_A12.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAAGCAAGAATATTTC
SPLT1_0057_G08.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
HTMT1_0018_A08.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
CLNT1_0122_D06.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
ITT01_0044_E05.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
PBL01_0023_C10.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
MLN01_0078_G02.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
HTMT1_0102_B03.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
ILNT1_0026_C11.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
HTMT1_0144_C09.b : GGTTGGAAGCCTGGCAGTGATACCATCAAGCCTGATGTCCAGAAGAGCAAAGAATATTTC
20110601C-002421 : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
---------+---------+---------+---------+---------+---------+ 703
SPLT1_0058_A12.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
SPLT1_0057_G08.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
HTMT1_0018_A08.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
CLNT1_0122_D06.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
ITT01_0044_E05.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
PBL01_0023_C10.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCANGGCCAGGCGGCAGTGGGTGTCCATGAGA
MLN01_0078_G02.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
HTMT1_0102_B03.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
ILNT1_0026_C11.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
HTMT1_0144_C09.b : TCTAAACAGAAGTGAGCGCTGGGCCATCTCAGGGCCAGGCGGCAGTGGGTGTCCATGAGA
20110601C-002421 : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGACCTTATACTCAGCTCAGGTG
---------+---------+---------+---------+---------+---------+ 763
SPLT1_0058_A12.b : AACACGTCTTTTGTACTATTGTCATGCTTAAAACANCAGAACTTATACTCAGCTCAGGTG
SPLT1_0057_G08.b : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGAACTTATACTCAGCTCAGGTG
HTMT1_0018_A08.b : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGACCTTATACTCAGCTCAGGTG
CLNT1_0122_D06.b : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGACCTTATACTCAGCTCAGGTG
ITT01_0044_E05.b : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGACCTTATACTCAGCTCAGATG
PBL01_0023_C10.b : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGACCTTATACTCAACTCAGATG
MLN01_0078_G02.b : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGACCTTATACTCAGCTCAGATG
HTMT1_0102_B03.b : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGACCTTATACTCAGCTCAGGTG
ILNT1_0026_C11.b : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGACCTTATACTCAGCTCAGGTG
HTMT1_0144_C09.b : ACAACGTCTTTTGTACTATTGTCATGCTTAAAACACAAGACCTTATACTCAGCTCAGGTG
20110601C-002421 : TGTGGGACAGGACAGGCCTTTCTTGCAGGGGTTAGGGAGGCCATACTTTTCTTCCTCGGG
---------+---------+---------+---------+---------+---------+ 823
SPLT1_0058_A12.b : TGTGGGAACAGACAGGGCCTTTCTGCAGGGGTTTAGGGAGGCAAACTTTTCTTCTTCGGG
SPLT1_0057_G08.b : TGTGGGACAGGACAGCCNTTTTCTGCAGGGGTT*AGGAGGCCAGACTTTTTCTCCTCGGG
HTMT1_0018_A08.b : TGTGGGACAGGACAGGCCTTTTCTGCANNGGG*TAGGGAGGCAGACTTTTCTTCCCTCGG
CLNT1_0122_D06.b : TGTGGGACAGGACANGCCTTTCTTGCAGGGGTTAGGGNAGGCAGACTTTTTCTCCTCGGG
ITT01_0044_E05.b : TGTGGGACAGGACAGGCCTTTCTTGCAGGGGTTAGGGAGGCCATACTTTTCTTCCTCGGG
PBL01_0023_C10.b : TGTGGGACAGGACAGGCCTTTTCTGCAAGGGT*TAGGAAGGCATACTTTTCTTC**TCGG
MLN01_0078_G02.b : TGTGGGACAGGACAGGCCTTTTCTGCAGGGGTTAGGGAGGCCATACTTTTCTTCC*TCGG
HTMT1_0102_B03.b : TGTGGGACAGGACAGGCCTTTCTTGCANGGGTTAGGGGAGGCAGACTTTTCTTCCTCGGG
ILNT1_0026_C11.b : TGTGGGACAGGACAGGCCTTTCTTGCAGGGGTTAGGGAAGCCAGACTTTTCTTCCTCGGG
HTMT1_0144_C09.b : TGTGGGACAGGACAGGCCTTTCTTGCAGGGGTTAGGGAGGCCAGACTTTTCTTCCTCGGG
20110601C-002421 : AAGAAATGGCCTGCGCTTTAATTACGTGGCAGGCCAACTGGTGTGTCAGTAGCAGGGTTT
---------+---------+---------+---------+---------+---------+ 883
SPLT1_0058_A12.b : GAGAAAATGCCTGCGCTTAAATTACGTGGCA*GCCAACTGGTGTGTCATTACCAGGGTTT
SPLT1_0057_G08.b : AAGAAATGCCCTGCGCTTTANTTACGTGGCAGGGCCACTGGTGTGTCAGTAACAGGGTTT
HTMT1_0018_A08.b : NAGAAATGGCCTGCGCTTTNATTACGTGNCANGCCNACTGGTGTGTCAGTAGCAGGGTTT
CLNT1_0122_D06.b : GAGAAATGGCCTGCGCTTT*ATTACGTGGCAGGC*AACTGGTGTGTCAGTAGCA*GGTTT
ITT01_0044_E05.b : AGGAAATGGCCTGCGCTTTAATTACGTGGCAGGCCAACTGGTGTGTCAGTAGCAGGGTTT
PBL01_0023_C10.b : GAGGAATGGCCTGCGCTTTAATTACCTGGCANGCCAACTGGGGTGGTAATAACAAGGTTT
MLN01_0078_G02.b : GAGGAATGGCCTGCGCTTT*ATTACGTGGCAGGCCAACTGGTGTGTCAGTAACAGGGT*T
HTMT1_0102_B03.b : AAGAAATGGCCTGCGCTTTAAT*ACGTGGCAGGCC*ACTGGTGTGTCAGTAGCAGGGTTT
ILNT1_0026_C11.b : AGGAAATGGCCTGCGCTTTAATTACGTGGCAGGCCAACTGGTGTGTCAGTAGCAGGGTTT
HTMT1_0144_C09.b : AGGAAATGGCCTGCGCTTTAATTACGTGGCAGGCCAACTGGTGTGTCAGTAGCAGGGTTT
20110601C-002421 : CACTTTTGACCTTTTGTA*GTTCCTATTAACCTGAACTGAAAAAAAAAAAAAAAAAAAA.
---------+---------+---------+---------+---------+---------+ 941
SPLT1_0058_A12.b : TCATTTTGACCTTTTGgaaatcccaataaaccggaactggagaaaaaaanaanaaaaaan
SPLT1_0057_G08.b : CACTTTGAACCTTTGTA**GTTCTTATTAAACCTGACTGAGAAAAAAAAAAAA
HTMT1_0018_A08.b : CACTTTTGACCTTTTGTANGTCCCTATTAACCTGAACTGAGAAAAAAAAAAAAAAAAA
CLNT1_0122_D06.b : CACCTTTGACCTTTGTA***GTCCTATTAACCTGAactgggnaaaaaannnnnnnnnnnn
ITT01_0044_E05.b : CACTTTTGACTTTTTGTAGTTCCTATTAAACCCTGACTGAGAAAAAAAAAAAA
PBL01_0023_C10.b : CACTTTTGACCTTTGGA**GTTCTAATTAACCTGAACTGAAAAAAAAAAAAAAAAAggca
MLN01_0078_G02.b : CACTTTTGACTTTTGTA***GTCCTATAAACCTGAACTGGNaaaaaaaaaaaaanaaaan
HTMT1_0102_B03.b : CACTTTTGACCTTTGTAttcctattaaacctgactgnngaaaaaaaaanaaanaaaanaa
ILNT1_0026_C11.b : CACTTTTGACCTTTTGTAATTCCCTATTAAACTGAACTGAAAAAAAAAA
HTMT1_0144_C09.b : CACTTTTGACCTTTTGTA*GTTCCTATTAACCTGAACTGAAAAAAA
20110601C-002421 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
SPLT1_0058_A12.b : aanana
SPLT1_0057_G08.b :
HTMT1_0018_A08.b :
CLNT1_0122_D06.b : nnnnnnnnnnnnggccaatttgcccaaccgcaggtccggcgctaaatatccaaaaaaaaa
ITT01_0044_E05.b :
PBL01_0023_C10.b : catttgctcaactgcagttccggccccttaaaaatatcctcaagggcccaacttaccgta
MLN01_0078_G02.b : naaaaaannanaaannaaaaaaaaaaggccacttggctcaactgcagtccggcccctcta
HTMT1_0102_B03.b : aaaaaaaaannnnnnnnnnnnnnnnnnnncccnnnnnnccccttattgggttagggggta
ILNT1_0026_C11.b :
HTMT1_0144_C09.b :
20110601C-002421 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
SPLT1_0058_A12.b :
SPLT1_0057_G08.b :
HTMT1_0018_A08.b :
CLNT1_0122_D06.b : cctcacacctcccctgaactgaaacaaaatgaaggattgtgtgttaacttgtatgccctt
ITT01_0044_E05.b :
PBL01_0023_C10.b : accagtttttttaaaaagggccccataatggaccctattaaactaagcctggcgctgttt
MLN01_0078_G02.b : atatcctcgaggggccaagttaccgtacccgttcttgtaaaagggtcccaatggagccaa
HTMT1_0102_B03.b : tataaattaaaaattgggtaatttggttatttggagagaagattgaaaaatgaaaaaagg
ILNT1_0026_C11.b :
HTMT1_0144_C09.b :
20110601C-002421 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
SPLT1_0058_A12.b :
SPLT1_0057_G08.b :
HTMT1_0018_A08.b :
CLNT1_0122_D06.b : aagggtcacataaccaatctccaaattccaaaaacctttttccgtttcatggggttgcca
ITT01_0044_E05.b :
PBL01_0023_C10.b : aaactccggaccgaaaaatctacttgggatttttgaagaaacttattttggggtgaaaat
MLN01_0078_G02.b : tttaacagggactggccccgtttaaactccgaatgaaaacgctacttggaactttaaaga
HTMT1_0102_B03.b : tattttggaattttgaatttttgtttttaaaaaataaaataataaaaaattttctttttt
ILNT1_0026_C11.b :
HTMT1_0144_C09.b :
20110601C-002421 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
SPLT1_0058_A12.b :
SPLT1_0057_G08.b :
HTMT1_0018_A08.b :
CLNT1_0122_D06.b : accaaggttttatatgttgtcccgggacagacaatttccttcctctccacaaaaaccccc
ITT01_0044_E05.b :
PBL01_0023_C10.b : tggaaactcctcaaatttaacctcagaaaaaaattttaggtaaaggttaacacgcctacc
MLN01_0078_G02.b : cttacttggggtggataatggaaaccccacagattaagcctaaggaataaattttagggt
HTMT1_0102_B03.b : ttttttttggggggggggggggggttgggtttttttttaagcgggggggggggggtgttt
ILNT1_0026_C11.b :
HTMT1_0144_C09.b :
20110601C-002421 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
SPLT1_0058_A12.b :
SPLT1_0057_G08.b :
HTMT1_0018_A08.b :
CLNT1_0122_D06.b : cggttggggggggagtgtccccaagggaatgttctcaagggatccaaaattaaagccaga
ITT01_0044_E05.b :
PBL01_0023_C10.b : tccgcgtaaattgtcccggttttttaaaatatccccgccgtgtttcttttttttttatat
MLN01_0078_G02.b : agggtaacaacccatcttgcccgaatttctcggaaaaattgaaattt
HTMT1_0102_B03.b : tttttggtttccccccccggagctttggtgggtcctccttccccnngttggtttgggggg
ILNT1_0026_C11.b :
HTMT1_0144_C09.b :
20110601C-002421 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
SPLT1_0058_A12.b :
SPLT1_0057_G08.b :
HTMT1_0018_A08.b :
CLNT1_0122_D06.b : ggaaaaaaggttgttttttccccccactatcccagggaagaaaaacccccnnnnnccccc
ITT01_0044_E05.b :
PBL01_0023_C10.b : aaccaggttttgccccccccctttttttaaccccccttgagttttttttaaccccccccc
MLN01_0078_G02.b :
HTMT1_0102_B03.b : gggtaaaagagaataaaaagagaggaaggggtgtgttttccctcacctttttttagaaaa
ILNT1_0026_C11.b :
HTMT1_0144_C09.b :
20110601C-002421 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
SPLT1_0058_A12.b :
SPLT1_0057_G08.b :
HTMT1_0018_A08.b :
CLNT1_0122_D06.b : cacacacccctggctctttttttttttccccactcatnnnnnnnnnnnnnnnnnnnnnnn
ITT01_0044_E05.b :
PBL01_0023_C10.b : aaaaaaaagaatttttttttttttaataaaaaaaaacaaaaattttttggccccatttgt
MLN01_0078_G02.b :
HTMT1_0102_B03.b : aaaaaaggagacttttactccccctttttcttt
ILNT1_0026_C11.b :
HTMT1_0144_C09.b :
20110601C-002421 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
SPLT1_0058_A12.b :
SPLT1_0057_G08.b :
HTMT1_0018_A08.b :
CLNT1_0122_D06.b : nnnnnnnnnnnnnnnnnnnnnnnnnnn
ITT01_0044_E05.b :
PBL01_0023_C10.b : ttttattgcga
MLN01_0078_G02.b :
HTMT1_0102_B03.b :
ILNT1_0026_C11.b :
HTMT1_0144_C09.b :
TOP
TOP