[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-003111
Length:
1,667
Sequence:
[FASTA format sequence]
CCTCCCTCCG GTCTTCCAAC ACAGCTCCGC CACAACTCCC CCTCATACCC CCTCTCTTCG
ATTTTCCAGC GGATCCAGGA CGTTCTGTCC TCCCCCCACC ACAGCATCCG GATCGCTCAG
GCTCTCCGGT GGGGGAGCCA GCTTTGGGGC TGGAAATGCT TGCAGCATGC CTGGAATCGG
AAGCAGTTTC TCATGTGCCT TTGGTGGCAG CACCTCAGGA GGCAATGGAG TCGGGGGCAA
TCCCTGCGCC GGCTTCACTC TGAATGAGGG GGGCCTCCTT TCCGGCAACG AGAAGGTGAC
CATGCAGAAC CTCAATGACC GCCTGGCCTC CTACCTGGAC AACGTGCGCG CCCTGGAGGA
GGCCAACGCC GATCTGTAGC AGAAGATCAA GGGCTGGTAT GAGAAATTTG GACCCGGTTC
TTGCCGCGGT CTTGATCACG ACTACAGTAG ATACTTCCCG ATAATTGATG ATCTCAAAAA
TCAGATCATT GCTTCCACCA CCAGCAATGC TAACGCTGTT CTACAGATCG ATAATGCCAG
GCTGACCGCT GATGACTTCA GACTCAAGTA TGAGAATGAG CTGGCTCTGC ACCAGAGCGT
GGAAAGTGAT GTCAATGGGC TACGCAGGGT TCTGGATGAG ATCACCCTGT GCAGAACAGA
CCTGGAGATT CAGTACGAAA CCCTAAGTGA AGAGCTGACG TACCTCAAGA AGAACCATAA
AGAGGAAATG CAAGTTCTGC AGTGCGCGGC CGGAGGCAAC GTGAACGTGG AGATGAACGC
GGCGCCCGGT GTGGACCTCA CAGTTCTGCT GAACAACATG CGGGCGGAGT ACGAAGCCCT
GGCCGAGCAG AACCGCAGGG ATGCAGAGGC CTGGTTCAAT GAAAAGAGCG CTTCGCTGCA
ACAGCAGATC TCTGAGGACG CGGGCGCCAC CACCTCGGCC CGGAACGAGT TGACTGAGAT
GAAGCGCAAC CTCCAAACCC TGGAAATTGA ACTTCAGTCT CTCCTAGCCA CGAAACACTC
CCTGGAGTGC TCCTTGAGCG AGACGGAGGG CAACTACTGT GCGCAGCTGG CCCAGATCCA
GGCTCAGATC GGGGCCCTGG AGGAGCAGCT GCACCAGGTC AGGACTGAGA CCGAGGGCCA
GAAACTGGAG TACGAGCAGC TCCTGGACAT CAAGGTCCAC CTGGAAAAAG AAATTGAGAC
CTACTGCCTC CTCATCGGTG GAGAGGAAGG GGCTTGCAAG TCTGGAGGTT ACAAGTCTAA
AGATTACGGA TCCGGAAACA TGGGAGCCCA ACTCAAAGAT CCAATCAAAG CCATAGTGGT
CAAGAAAGTT CTTGAGGAGG TAGACCAACG CAGCAAAATA CTTACCACCA GGCTCCACTC
TCTGGAAGAG AAATCTCAAA GCAATTAAAT TGATACATAA GAAAGAGCGT ATGCCACATA
CTCTCGGAGA AGAGAAGGCG TCATATATCT GTCTGGAAAA ATGAGCAAGT CTAAGGAAAA
AATCTGTCTT GGTGTCTTTC TATTACTGAA ATATAATCTC TATCTGGGCA ATCAATAGTA
TATTTTCCCG TTCATCTGGA AGAACAGTCA CATACAAATA TGATGACTCA TTTGATTACC
TTCCAGAAAG TGTTGTCAAT TCTTTGTAGT CAATAAACCT TCTTTCT
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | KRT25 | keratin, type I cytoskeletal 25 [Homo sapiens]. | 673 | 0.0 | O |
|
| KRT27 | keratin, type I cytoskeletal 27 [Homo sapiens]. | 597 | e-171 | O |
|
| KRT28 | keratin, type I cytoskeletal 28 [Homo sapiens]. | 558 | e-159 | O |
|
| KRT26 | keratin, type I cytoskeletal 26 [Homo sapiens]. | 519 | e-147 | O |
|
| KRT10 | keratin, type I cytoskeletal 10 [Homo sapiens]. | 399 | e-111 | |
|
| KRT24 | keratin, type I cytoskeletal 24 [Homo sapiens]. | 396 | e-110 | |
|
| KRT12 | keratin, type I cytoskeletal 12 [Homo sapiens]. | 374 | e-103 | |
|
| KRT16 | keratin, type I cytoskeletal 16 [Homo sapiens]. | 355 | 7e-98 | |
|
| KRT14 | keratin, type I cytoskeletal 14 [Homo sapiens]. | 348 | 8e-96 | |
|
| KRT15 | keratin, type I cytoskeletal 15 [Homo sapiens]. | 347 | 2e-95 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Krt25 | keratin, type I cytoskeletal 25 [Mus musculus]. | 666 | 0.0 | O |
|
| Krt27 | keratin, type I cytoskeletal 27 [Mus musculus]. | 586 | e-167 | O |
|
| Krt28 | keratin, type I cytoskeletal 28 [Mus musculus]. | 548 | e-156 | O |
|
| Krt26 | keratin, type I cytoskeletal 26 [Mus musculus]. | 466 | e-131 | O |
|
| Krt10 | keratin, type I cytoskeletal 10 [Mus musculus]. | 382 | e-106 | |
|
| Krt24 | keratin, type I cytoskeletal 24 [Mus musculus]. | 380 | e-105 | |
|
| Krt12 | keratin, type I cytoskeletal 12 [Mus musculus]. | 374 | e-103 | |
|
| Krt17 | keratin, type I cytoskeletal 17 [Mus musculus]. | 346 | 4e-95 | O |
|
| Krt13 | keratin, type I cytoskeletal 13 [Mus musculus]. | 345 | 8e-95 | O |
|
| Krt42 | keratin, type I cytoskeletal 42 [Mus musculus]. | 345 | 5e-95 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC491009 | PREDICTED: similar to keratin 25A [Canis familiaris]. | 618 | e-177 | O |
|
| LOC491007 | PREDICTED: similar to keratin 25C [Canis familiaris]. | 595 | e-170 | O |
|
| LOC608107 | PREDICTED: similar to keratin 25D [Canis familiaris]. | 563 | e-160 | |
|
| LOC491008 | PREDICTED: similar to keratin 25B isoform 1 [Canis familiaris]. | 548 | e-156 | O |
|
| LOC491008 | PREDICTED: similar to keratin 25B isoform 3 [Canis familiaris]. | 525 | e-149 | O |
|
| KRT10 | keratin, type I cytoskeletal 10 [Canis lupus familiaris]. | 394 | e-109 | |
|
| KRT12 | keratin 12 [Canis lupus familiaris]. | 381 | e-106 | |
|
| LOC490978 | PREDICTED: similar to Keratin, type I cytoskeletal 16 (Cytokeratin 16) (K16) (CK 16) [Canis familiaris]. | 356 | 4e-98 | |
|
| KRT17 | PREDICTED: similar to type I keratin KA17 isoform 1 [Canis familiaris]. | 345 | 1e-94 | O |
|
| LOC490983 | PREDICTED: similar to keratin 13 isoform a isoform 7 [Canis familiaris]. | 343 | 3e-94 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| KRT25 | keratin, type I cytoskeletal 25 [Bos taurus]. | 686 | 0.0 | O |
|
| KRT25 | PREDICTED: keratin 25-like [Bos taurus]. | 686 | 0.0 | O |
|
| KRT27 | PREDICTED: keratin, type I cytoskeletal 27-like [Bos taurus]. | 598 | e-171 | O |
|
| KRT27 | keratin, type I cytoskeletal 27 [Bos taurus]. | 598 | e-171 | O |
|
| KRT10 | keratin, type I cytoskeletal 28 [Bos taurus]. | 556 | e-158 | O |
|
| LOC100140799 | PREDICTED: keratin, type I cytoskeletal 28-like [Bos taurus]. | 556 | e-158 | O |
|
| KRT26 | keratin, type I cytoskeletal 26 [Bos taurus]. | 491 | e-139 | O |
|
| KRT26 | PREDICTED: keratin, type I cytoskeletal 26-like [Bos taurus]. | 491 | e-139 | O |
|
| KRT24 | keratin, type I cytoskeletal 24 [Bos taurus]. | 405 | e-113 | |
|
| KRT24 | PREDICTED: keratin 27-like [Bos taurus]. | 405 | e-113 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC100520694 | PREDICTED: keratin, type I cytoskeletal 28-like [Sus scrofa]. | 552 | e-157 | |
|
| LOC100524337 | PREDICTED: keratin, type I cytoskeletal 25-like [Sus scrofa]. | 530 | e-151 | O |
|
| KRT26 | PREDICTED: keratin, type I cytoskeletal 26 [Sus scrofa]. | 469 | e-132 | O |
|
| LOC100519971 | PREDICTED: keratin, type I cytoskeletal 10-like [Sus scrofa]. | 390 | e-108 | |
|
| KRT12 | PREDICTED: keratin, type I cytoskeletal 12 [Sus scrofa]. | 380 | e-106 | |
|
| LOC100521219 | PREDICTED: keratin, type I cytoskeletal 25-like [Sus scrofa]. | 344 | 7e-95 | O |
|
| LOC100515506 | PREDICTED: keratin, type I cytoskeletal 15-like [Sus scrofa]. | 342 | 5e-94 | |
|
| LOC100515166 | PREDICTED: keratin, type I cytoskeletal 13-like [Sus scrofa]. | 341 | 8e-94 | |
|
| LOC100515339 | PREDICTED: keratin, type I cytoskeletal 19-like [Sus scrofa]. | 333 | 2e-91 | O |
|
| KRT36 | PREDICTED: keratin, type I cuticular Ha6 isoform 2 [Sus scrofa]. | 302 | 3e-82 | O |
|
|
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20110601C-003111 : ........................CCTCCCTCCGGTCTTCCAACACAGCTCCGCCACAAC
---------+---------+---------+---------+---------+---------+ 36
SKNB1_0010_E06.b : nnnccgctacgctggctctgaagtCCTCCCTCCGGTCTTCCAACACAGCTCCGCCACAAC
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b :
20110601C-003111 : TCCCCCTCATACCCCCTCTCTTCGATTTTCCAGCGGATCCAGGACGTTCTGTCCTCCCCC
---------+---------+---------+---------+---------+---------+ 96
SKNB1_0010_E06.b : TCCCCCTCATACCCCCTCTCTTCGATTTTCCAGCGGATCCAGGACGTTCTGTCCTCCCCC
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b :
20110601C-003111 : CACCACAGCATCCGGATCGCTCAGGCTCTCCGGTGGGGGAGCCAGCTTTGGGGCTGGAAA
---------+---------+---------+---------+---------+---------+ 156
SKNB1_0010_E06.b : CACCACAGCATCCGGATCGCTCAGGCTCTCCGGTGGGGGAGCCAGCTTTGGGGCTGGAAA
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b :
20110601C-003111 : TGCTTGCAGCATGCCTGGAATCGGAAGCAGTTTCTCATGTGCCTTTGGTGGCAGCACCTC
---------+---------+---------+---------+---------+---------+ 216
SKNB1_0010_E06.b : TGCTTGCAGCATGCCTGGAATCGGAAGCAGTTTCTCATGTGCCTTTGGTGGCAGCACCTC
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b :
20110601C-003111 : AGGAGGCAATGGAGTCGGGGGCAATCCCTGCGCCGGCTTCACTCTGAATGAGGGGGGCCT
---------+---------+---------+---------+---------+---------+ 276
SKNB1_0010_E06.b : AGGAGGCAATGGAGTCGGGGGCAATCCCTGCGCCGGCTTCACTCTGAATGAGGGGGGCCT
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b :
20110601C-003111 : CCTTTCCGGCAACGAGAAGGTGACCATGCAGAACCTCAATGACCGCCTGGCCTCCTACCT
---------+---------+---------+---------+---------+---------+ 336
SKNB1_0010_E06.b : CCTTTCCGGCAACGAGAAGGTGACCATGCAGAACCTCAATGACCGCCTGGCCTCCTACCT
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b :
20110601C-003111 : GGACAACGTGCGCGCCCTGGAGGAGGCCAACGCCGATCTGTAGCAGAAGATCAAGGGCTG
---------+---------+---------+---------+---------+---------+ 396
SKNB1_0010_E06.b : GGACAACGTGCGCGCCCTGGAGGAGGCCAACGCCGATCTGTAGCAGAAGATCAAGGGCTG
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b :
20110601C-003111 : GTATGAGAAATTTGGACCCGGTTCTTGCCGCGGTCTTGATCACGACTACAGTAGATACTT
---------+---------+---------+---------+---------+---------+ 456
SKNB1_0010_E06.b : GTATGAGAAATTTGGACCCGGTTCTTGCCGCGGTCTTGATCACGACTACAGTAGATACTT
SKNB1_0062_A10.b : nnnttcctggcgttggcctctggagatccgactacGTAGATACTT
SKNB1_0005_C10.b : tgg
SKNB1_0043_B06.b :
SKNB1_0070_H01.b :
20110601C-003111 : CCCGATAATTGATGATCTCAAAAATCAGATCATTGCTTCCACCACCAGCAATGCTAACGC
---------+---------+---------+---------+---------+---------+ 516
SKNB1_0010_E06.b : CCCGATAATTGATGATCTCAAAAATCAGATCATTGCTTCCACCACCAGCAATGCTAACGC
SKNB1_0062_A10.b : CCCGATAATTGATGATCTCAAAACTCTGATCATTGCTTCCACCACCAGCAATGCTAACGC
SKNB1_0005_C10.b : ctctggtATTGATGATCTTAAAA*TCAGATCATTGCTTCCACCACCAGCAATGCTAACGC
SKNB1_0043_B06.b : nnggggannn
SKNB1_0070_H01.b :
20110601C-003111 : TGTTCTACAGATCGATAATGCCAGGCTGACCGCTGATGACTTCAGACTCAAGTATGAGAA
---------+---------+---------+---------+---------+---------+ 576
SKNB1_0010_E06.b : TGTTCTACAGATCGATAATGCCAGGCTGACCGCTGATGACTTCAGACTCAAGTATGAGAA
SKNB1_0062_A10.b : TGTTCTACAGATCGATAATGCCAGGCTGACCGCTGATGACTTCAGACTCAAGTATGAGAA
SKNB1_0005_C10.b : TGTTCTACAGATTGATAACGCCAGGCTGACCGCTGATGACTTCAGACTCAAGTATGAGAA
SKNB1_0043_B06.b : nannnccagcgtggctcatacgccggctgaCGCTGATGACTT*AGACTCA*GTATGAGAA
SKNB1_0070_H01.b :
20110601C-003111 : TGAGCTGGCTCTGCACCAGAGCGTGGAAAGTGATGTCAATGGGCTACGCAGGGTTCTGGA
---------+---------+---------+---------+---------+---------+ 636
SKNB1_0010_E06.b : TGAGCTGGCTCTGCACCAGAGCGTAGAAAGTGATGTCAATGGGCTACGCAGGGTTCTGGA
SKNB1_0062_A10.b : TGAGCTGGCTCTGCACCAGAGCGTAGAAAGTGATGTCAATGGGCTACGCAGGGTTCTGGA
SKNB1_0005_C10.b : TGAGCTGGCTCTGCACCAGAGCGTGGAAAGTGATGTCAATGGGCTACGCAGGGTTCTGGA
SKNB1_0043_B06.b : TGAGCTGGCTCTGCACCAGAGCGTGGAAAGTGATGTCAATGGGCTACGCAGGGTTCTGGA
SKNB1_0070_H01.b :
20110601C-003111 : TGAGATCACCCTGTGCAGAACAGACCTGGAGATTCAGTACGAAACCCTAAGTGAAGAGCT
---------+---------+---------+---------+---------+---------+ 696
SKNB1_0010_E06.b : TGAGATCACCCTGTGCAGAACAGACCTGGAGATTCAGTACGAAACCCTAAGTGAAGAGCT
SKNB1_0062_A10.b : TGAGATCACCCTGTGCAGAACAGACCTGGAGATTCAGTACGAAACCCTAAGTGAAGAGCT
SKNB1_0005_C10.b : TGAGATCACCCTGTGCAGAACAGACCTGGAGATTCAGTACGAAACCCTAAGTGAAGAGCT
SKNB1_0043_B06.b : TGAGATCACCCTGTGCAGAACAGACCTGGAGATTCAGTACGAAACCCTAAGTGAAGAGCT
SKNB1_0070_H01.b :
20110601C-003111 : GACGTACCTCAAGAAGAACCATAAAGAGGAAATGCAAGTTCTGCAGTGCGCGGCCGGAGG
---------+---------+---------+---------+---------+---------+ 756
SKNB1_0010_E06.b : GACGTACCCTCAGAAGAACCATAAAGAGGAAATGCAAGTTCTGCAGTGCGCGGCCGGAGG
SKNB1_0062_A10.b : GACGTACCTCAAGAAGAACCATAAAGAGGAAATGCAAGTTCTGCAGTGCGCGGCCGGAGG
SKNB1_0005_C10.b : GACGTACCTCAAGAAGAACCATAAAGAGGAAATGCAAGTTCTGCAGTGCGCGGCCGGAGG
SKNB1_0043_B06.b : GACGTACCTCAAGAAGAACCATAAAGAGGAAATGCAAGTTCTGCAGTGCGCGGCCGGAGG
SKNB1_0070_H01.b :
20110601C-003111 : CAACGTGAACGTGGAGATGAACGCGGCGCCCGGTGTGGACCTCACAGTTCTGCTGAACAA
---------+---------+---------+---------+---------+---------+ 816
SKNB1_0010_E06.b : CAACGTGAACGTGGAGATGAACGCGGCGCCCGGTGTGGACCTCACAGTTCTGCTGAAACA
SKNB1_0062_A10.b : CAACGTGAACGTGGAGATGAACGCGGCGCCCGGTGTGGACCTCACAGTTCTGCTGAACAA
SKNB1_0005_C10.b : CAACGTGAACGTGGAGATGAACGCGGCGCCCGGTGTGGACCTCACAGTTCTGCTGAACAA
SKNB1_0043_B06.b : CAACGTGAACGTGGGGATGAACGCGGCGCCCGGTGTGGACCTCACAATTCTGCTGAACAA
SKNB1_0070_H01.b :
20110601C-003111 : CATGCGGGCGGAGTACGAAGCCCTGGCCGAGCAGAACCGCAGGGATGCAGAGGCCTGGTT
---------+---------+---------+---------+---------+---------+ 876
SKNB1_0010_E06.b : CATGCGGGCGGAGTACGAAGCCCTGGGCGAGCAGAACCTGCAGGATGCAGAGGCCTGGTT
SKNB1_0062_A10.b : CATGCGGGCGGAGTACGAAGCCCTGGCCGAGCAGAACCGCAGGGATGCAGAGGCCTGGTT
SKNB1_0005_C10.b : CATGCGGGCGGAGTACGAAGCCCTGGCCGAGCAGAACCGCAGGGATGCAGGGGCCTGGTT
SKNB1_0043_B06.b : CATGCGGGCGGAGTACGAAGCCCTGGCCGAGCAGAACCGCAGGGATGCAGAGGCCTGGTT
SKNB1_0070_H01.b : nnnnccgaannnnnnnnaccaccgttt
20110601C-003111 : CAATGAAAAGAGCGCTTCGCTGCAACAGCAGATCTCTGAGGACGCGGGCGCCACCACCTC
---------+---------+---------+---------+---------+---------+ 936
SKNB1_0010_E06.b : CAATGAAAAGAGCGCTTCCCTGCCACAGCAGATCTCTGAGGACGCGGGCGCCACCCCCTC
SKNB1_0062_A10.b : CAATGAAAAGAGCGCTTCGCTGCAACAGCAGATCTCTGAGGACGCGGGCGCCACCACCTC
SKNB1_0005_C10.b : CAATGAAAAGAGCGCTTCGCTGCAACAGCAGATCTCTGAGGACGCGGGCGCCACCACCTC
SKNB1_0043_B06.b : CAATGAAAAGAGCGCTTCGCTGCAACAGCAGATCTCTGAGGACGCGGGCGCCACCACCTC
SKNB1_0070_H01.b : gctatgggaagGCGCTTCGCTGCAACAGCAGATCTCTGAGGACGCGGGCGCCACCACCTC
20110601C-003111 : GGCCCGGAACGAGTTGACTGAGATGAAGCGCAACCTCCAAACCCTGGAAATTGAACTTCA
---------+---------+---------+---------+---------+---------+ 996
SKNB1_0010_E06.b : CGCCCCGAACGAGTTGACTGAGATAAACCCCAACCTCCCAACCCctggaaattgaacttt
SKNB1_0062_A10.b : GGCCCGGAACGAGTTGACTGAGATGAAGCGCAACCTCCAAACCCTGGAAATTGAACTTCA
SKNB1_0005_C10.b : GGCCCGGAACGAGTTGACTGAGATGAAGCGCAACCTCCAAACCCTGGAAATTGAACTTCA
SKNB1_0043_B06.b : GGCCCGGAACGAGTTGACTGAGATGAAGCGCAACCTCCAAACCCTGGAAATTGAACTTCA
SKNB1_0070_H01.b : GGCCCGGAACGAGTTGACTGAGATGAAGCGCAACCTCCAAACCCTGGAAATTGAACTTCA
20110601C-003111 : GTCTCTCCTAGCCACGAAACACTCCCTGGAGTGCTCCTTGAGCGAGACGGAGGGCAACTA
---------+---------+---------+---------+---------+---------+ 1056
SKNB1_0010_E06.b : cagtctccccccaacccacaaaaacacttcctggaaggggcttccttggaacgaaaaacg
SKNB1_0062_A10.b : GTCTCTCCTAGCCACGAAACACTCCCTGGAGTGCTCCTTGAGCGAGACGGAGGGCAACTA
SKNB1_0005_C10.b : GTCTCTCCTAGCCACGAAACACTCCCTGGAGTGCTCCTTGAGCGAGACGGAGGGCAACTA
SKNB1_0043_B06.b : GTCTCTCCTAGCCACGAAACACTCCCTGGAGTGCTCCTTGAGCGAGACGGAGGGCAACTA
SKNB1_0070_H01.b : GTCTCTCCTAGCCACGAAACACTCCCTGGAGTGCTCCTTGAGCGAGACGGAGGGCAACTA
20110601C-003111 : CTGTGCGCAGCTGGCCCAGATCCAGGCTCAGATCGGGGCCCTGGAGGAGCAGCTGCACCA
---------+---------+---------+---------+---------+---------+ 1116
SKNB1_0010_E06.b : aaggggcaacctccgtgtgcgccagctgggcccaaaaacccaggccttcaaatccggggg
SKNB1_0062_A10.b : CTGTGCGCAGCTGGCCCAGATCCAGGCTCAGATCGGGGCCCTGGAGGAGCAGCTGCACCA
SKNB1_0005_C10.b : CTGTGCGCAGCTGGCCCAGATCCAGGCTCAGATCGGGGCCCTGGAGGAGCAGCTGCACCA
SKNB1_0043_B06.b : CTGTGCGCAGCTGGCCCAGATCCAGGCTCAGATCGGGGCCCTGGAGGAGCAGCTGCACCA
SKNB1_0070_H01.b : CTGTGCGCAGCTGGCCCAGATCCAGGCTCAGATCGGGGCCCTGGAGGAGCAGCTGCACCA
20110601C-003111 : GGTCAGGACTGAGACCGAGGGCCAGAAACTGGAGTACGAGCAGCTCCTGGACATCAAGGT
---------+---------+---------+---------+---------+---------+ 1176
SKNB1_0010_E06.b :
SKNB1_0062_A10.b : GGTCAGGACTGAGACCGAGGGCCAGAAACTGGAGTACGAGCAGCTCCTGGACATCAAGGT
SKNB1_0005_C10.b : GGTCAGGACTGAGACCGAGGGCCAGAAACTGGAGTACGAGCAGCTCCTGGACATCAAGGT
SKNB1_0043_B06.b : GGTCAGGACTGAGACCGAGGGCCAGAAACTGGAGTACGAGCAGCTCCTGGACATCAAGGT
SKNB1_0070_H01.b : GGTCAGGACTGAGACCGAGGGCCAGAAACTGGAGTACGAGCAGCTCCTGGACATCAAGGT
20110601C-003111 : CCACCTGGAAAAAGAAATTGAGACCTACTGCCTCCTCATCGGTGGAGAGGAA*GGGGCTT
---------+---------+---------+---------+---------+---------+ 1235
SKNB1_0010_E06.b :
SKNB1_0062_A10.b : CCACCTGGAAAAAGAAATTGAGACCTACTGCCTCCTCATCGGTGGAGAGGAAAGGGGCTT
SKNB1_0005_C10.b : CCACCTGGAAAAAGAAATTGAGACCTACTGCCTCCTCATCGGTGGAGAGGAA*GGGGCTT
SKNB1_0043_B06.b : CCACCTGGAAAAAGAAATTGAGACCTACTGCCTCCTCATCGGTGGAGAGGAA*GGGGCTT
SKNB1_0070_H01.b : CCACCTGGAAAAAGAAATTGAGACCTACTGCCTCCTCATCGGTGGAGAGGAA*GGGGCTT
20110601C-003111 : GCAAGTCTGGAGGTTACAAGTCTAAAGATTACGGATCCGGAAACATGGGAGCCCAACTCA
---------+---------+---------+---------+---------+---------+ 1295
SKNB1_0010_E06.b :
SKNB1_0062_A10.b : GCAAGTCTGGAGGTTACAAGTCTAAAGATTACGGATCCGGAAACATGGGAGCCCAACTCA
SKNB1_0005_C10.b : GCAAGTCTGGAGGTTACAAGTCTAAAGATTACNGATCCGGAAACATGGGAGCCCAACTCA
SKNB1_0043_B06.b : GCAAGTCTGGAGGTTACAAGTCTAAAGATTACGGATCCGGAAACATGGGAGCCCAACTCA
SKNB1_0070_H01.b : GCAAGTCTGGAGGTTACAAGTCTAAAGATTACGGATCCGGAAACATGGGAGCCCAACTCA
20110601C-003111 : AAGATCCAATCAAAGCCATAGTGGTCAAGAAAGTTCTTGAGGAGGTAGACCAACGCAGCA
---------+---------+---------+---------+---------+---------+ 1355
SKNB1_0010_E06.b :
SKNB1_0062_A10.b : AAGATCCAATCNAAGCCATAGTGGTCAAGAAAGTTCTTGAGGAGGTAGACCAAACGCAGC
SKNB1_0005_C10.b : AAGATCCNATCAAAGCCATAGTGGTTCAGAAAGTTCTTGAGGAGGTAGACCNACGCAGCA
SKNB1_0043_B06.b : AAGATCCAATCAAAGCCATAGTGGTCAAGAAAGTTCTTGAGGAGGTAGACCAACGCAGCA
SKNB1_0070_H01.b : AAGATCCAATCAAAGCCATAGTGGTCAAGAAAGTTCTTGAGGAGGTAGACCAACGCAGCA
20110601C-003111 : AAATACTTACCACCAGGCTCCACTCTCTGGAAGAGAAATCTCAAAGCAATTAAATTGATA
---------+---------+---------+---------+---------+---------+ 1415
SKNB1_0010_E06.b :
SKNB1_0062_A10.b : AAATACTTACCACCAGGCTCCACTCTCTGGAAGAGAAATCTCAAAGCANTTAAATTGATA
SKNB1_0005_C10.b : AAATACTTACCACCAGGCTCCACTCTCTGGAAGAGGAATCTTCAAAGCATTTAATTGATA
SKNB1_0043_B06.b : AAATACTTACCACCAGGCTCCACTCTCTGGAAGAGAAATCTCANNAGCATTAAATTGATA
SKNB1_0070_H01.b : AAATACTTACCACCAGGCTCCACTCTCTGGAAGAGAAATCTCAAAGCAATTAAATTGATA
20110601C-003111 : CATAAGAAAGAGCGTATGCCACATACTCTCGGAGAAGAGAAGGCGTCATATATCTGTCTG
---------+---------+---------+---------+---------+---------+ 1475
SKNB1_0010_E06.b :
SKNB1_0062_A10.b : CATAAGAAAGAGCGTATGCCACATACTCTCGGAGAAGAAGAAGCGTCATATATCTGTCTG
SKNB1_0005_C10.b : CATAGGAAAGAGCGTATGCCACATACTcctcgagaagaaaaagcgtcctatatctgtctg
SKNB1_0043_B06.b : CATAAGAAAGAGCGTATGCCACATACTCTCGGAGAAGAGAAGGCGTCATATATCTGTCTG
SKNB1_0070_H01.b : CATAAGAAAGAGCGTATGCCACATACTCTCGGAGAAGAGAAGGCGTCATATATCTGTCTG
20110601C-003111 : GAAAAATGAGCAAGTCTAAGGAAAAAATCTGTCTTGGTGTCTTTCTATTACTGAAATATA
---------+---------+---------+---------+---------+---------+ 1535
SKNB1_0010_E06.b :
SKNB1_0062_A10.b : GAAAAATGAACAAGTCTAAGGAAAAAATCTGgtctggtggctttctattacggaaatata
SKNB1_0005_C10.b : gaaaaatgaccaagtcctagggaaaaacctggccttggtggctttccattacggaaaaat
SKNB1_0043_B06.b : GNANNAATGAGCAGTCTAAGGAAAAAATCTGTCTTGGTGTCTTTttctatactgaatata
SKNB1_0070_H01.b : GAAAAATGAGCAAGTCTAAGGAAAAAATCTGTCTTGGTGTCTTTCTATTACTGAAATATA
20110601C-003111 : ATCTCTATCTGGGCAATCAATAGTATATTTTCCCGTTCATCTGGAAGAACAGTCACATAC
---------+---------+---------+---------+---------+---------+ 1595
SKNB1_0010_E06.b :
SKNB1_0062_A10.b : atccctatcttggccatccataataaattttcccgttcatcctgaaaaccgtcccctacc
SKNB1_0005_C10.b : aatctctatcgggggcaatcaataagaaaattttcccgttccctctggaggaccagttcc
SKNB1_0043_B06.b : tctctatctgggcaatcatagtatatttcccccgtcatctggagaacagtcccatacaat
SKNB1_0070_H01.b : ATCTCTATCTGGGCAATCAATAGTATATTTTCCCGTTCATCTGGAAGAACAGTCACATAC
20110601C-003111 : AAATATGATGACTCATTTGATTACCTTCCAGAAAGTGTTGTCAATTCTTTGTAGTCAATA
---------+---------+---------+---------+---------+---------+ 1655
SKNB1_0010_E06.b :
SKNB1_0062_A10.b : aaaatgaggaccccttgattaccttcccaaaaggttttcattcctttt
SKNB1_0005_C10.b : cttn
SKNB1_0043_B06.b : atgatgactcctttgataccttcccgaagggtggtcattcctttgtagtcaaaaaacctc
SKNB1_0070_H01.b : AAATATGATGACTCATTTGATTACCTTCCAGAAAGTGTTGTCAATTCTTTGTAGTCAATA
20110601C-003111 : AACCTTCTTTCT................................................
---------+---------+---------+---------+---------+---------+ 1667
SKNB1_0010_E06.b :
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b : ctttctttgcaggtaaaaaaaaaaaaaaaaaaaaggccctgtggtcaaacttaaggtccg
SKNB1_0070_H01.b : AACCTTCTTTCTttnagcagttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
20110601C-003111 : ............................................................
---------+---------+---------+---------+---------+---------+ 1667
SKNB1_0010_E06.b :
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b : gcccctaaaattcttaaaaaaacccccccccccc
SKNB1_0070_H01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaggccccatgtg
20110601C-003111 : ............................................................
---------+---------+---------+---------+---------+---------+ 1667
SKNB1_0010_E06.b :
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b : cccaaactgcaggtcccggcccctaaactattctagaaaaaaacctcccacactcccccc
20110601C-003111 : ............................................................
---------+---------+---------+---------+---------+---------+ 1667
SKNB1_0010_E06.b :
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b : gaacttgaaactaaagaaggccattgtgggtgttaactgttaattgccccttaaaagggt
20110601C-003111 : ............................................................
---------+---------+---------+---------+---------+---------+ 1667
SKNB1_0010_E06.b :
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b : acaataaagcttaccccccccattttccaaaaaagcctttttttccgggtttccgttggg
20110601C-003111 : ............................................................
---------+---------+---------+---------+---------+---------+ 1667
SKNB1_0010_E06.b :
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b : ggtggccccaaccaaaggattttaaaaggttggggacccccggaccacccccaataaatc
20110601C-003111 : ............................................................
---------+---------+---------+---------+---------+---------+ 1667
SKNB1_0010_E06.b :
SKNB1_0062_A10.b :
SKNB1_0005_C10.b :
SKNB1_0043_B06.b :
SKNB1_0070_H01.b : ccctcccttccccccaaaaaaaaacgccccgggttttgggggggggaggaaacttctac
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