Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-007336

Sequence: [FASTA format sequence] TTTGTGAAGA GGCGAAGACT GAGCGGTTGC GGCGGTGTTG CCGACCTCGA GCAGCAGTCC GCTTCTCCAC GTAGAACCCG GGAGTAGGAG ATTCAGAATC GAATCTCTTC TCCCTCCCCC CTCCTGTTTT TCGGCTTTGT GAATTACCTT ATCATCAAAG ACAATGGCCA GCAACGTTAC CAACAAGACA GATCCTCGCT CCATGAATTC CCGTGTATTC ATTGGGAATC TCAATACTCT TGTGGTCAAG AAATCTGATG TGGAGGCAAT CTTCTCAAAA TATGGCAAAA TCGTGGGTTG CTCTGTTCAT AAGGGCTTTG CCTTCGTTCA GTACGTTAAT GAGAGAAATG CTCGAGCTGC TGTTGCAGGA GAGGATGGCC GAATGATTGC TGGCCAGGTT TTAGATATTA ATCTGGCTGC AGAGCCAAAA GTGAACCGAG GAAAGGCAGG TGTGAAACGA TCTGCAGCGG AGATGTACGG GTCAGTACCA GAACACCCTT CTCCGTCCCC TCTACTCAGC TCCTCTTTTG ACTTGGACTA TGACTTTCAA CGGGATTATT ATGACAGGAT GTACAGTTAC CCAGCACGTG TTCCTCCTCC TCCTCCTATT GCTCGGGCTG TAGTGCCCTC AAAACGCCAG CGTGTATCAG GGAACACCTC ACGAAGGGGC AAAAGTGGCT TCAATTCTAA GAGTGGACAG CGGGGATCAT CTTCTAAGTC TGGAAAGTTA AAAGGAGATG ACCTCCAGGC CATTAAGAAG GAGTTGACCC AGATAAAACA AAAAGTGGAT TCTCTACTGG AAAGCCTGGA AAAAATCGAA AAGGAACAGA GCAAACAAGG AGAGATGAAG AATGATAAGT CAGAAGAGGA GCAGAGCAGC AGCTCCCAGA AGAAAGATGA GACTAATGTG AAGATGGAGT CTGAGGGGGG TGCAGATGAC TCTGCTGAGG AGGGGGACCT ACTGGATGAT GATGATAATG AAGATCGGGG GGATGACCAG CTGGAGTTGA TCAAGGATGA TGAAAAAGAG GCTGAGGAAG GAGGGGATGA CAGAGACAGC GCCAATGGCG AGGATGACTC TTAAGCACAT AGTGGGGTTT AGAAATCTTG TCCCATTATT TCTTTACCTA GGCGCTTGTC TAAGATCAAA ATTTTCACCA GATCCTCTCC CCTAGTATCT TCAGCACATG CTCACTGTTC TCCCCATCCT TGTCCTTCCC ATGTTCATTA ATTCATATTG CCCTGCGCCT AGTCCCATTT TCACTTCTTT GACGCTCCTG GTAGTTATGT AAAGTCCTTA CCCTGTAATT TTTGCTTTTA AATTTGAATA CCTCTTTATG AATTTACCAA TAAAAAGGAT GTTTCCTTTT GAAAAAAAAA AAAAAAAAAA AAAAAAAAAA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
HNRNPC heterogeneous nuclear ribonucleoproteins C1/C2 isoform a [Homo sapiens]. 328 7e-90 O

HNRNPC heterogeneous nuclear ribonucleoproteins C1/C2 isoform a [Homo sapiens]. 328 7e-90 O

HNRNPC heterogeneous nuclear ribonucleoproteins C1/C2 isoform b [Homo sapiens]. 316 3e-86 O

HNRNPC heterogeneous nuclear ribonucleoproteins C1/C2 isoform b [Homo sapiens]. 316 3e-86 O

HNRNPCL1 heterogeneous nuclear ribonucleoprotein C-like 1 [Homo sapiens]. 282 5e-76 O

LOC649330 heterogeneous nuclear ribonucleoprotein C-like [Homo sapiens]. 281 8e-76 O

LOC440563 heterogeneous nuclear ribonucleoprotein C-like [Homo sapiens]. 275 6e-74 O

RALYL RNA-binding Raly-like protein isoform 1 [Homo sapiens]. 193 3e-49 O

RALYL RNA-binding Raly-like protein isoform 2 [Homo sapiens]. 193 3e-49 O

RALYL RNA-binding Raly-like protein isoform 2 [Homo sapiens]. 193 3e-49 O

Locus	Definition	Score	E value	FL
HNRNPC	heterogeneous nuclear ribonucleoproteins C1/C2 isoform a [Homo sapiens].	328	7e-90	O
HNRNPC	heterogeneous nuclear ribonucleoproteins C1/C2 isoform a [Homo sapiens].	328	7e-90	O
HNRNPC	heterogeneous nuclear ribonucleoproteins C1/C2 isoform b [Homo sapiens].	316	3e-86	O
HNRNPC	heterogeneous nuclear ribonucleoproteins C1/C2 isoform b [Homo sapiens].	316	3e-86	O
HNRNPCL1	heterogeneous nuclear ribonucleoprotein C-like 1 [Homo sapiens].	282	5e-76	O
LOC649330	heterogeneous nuclear ribonucleoprotein C-like [Homo sapiens].	281	8e-76	O
LOC440563	heterogeneous nuclear ribonucleoprotein C-like [Homo sapiens].	275	6e-74	O
RALYL	RNA-binding Raly-like protein isoform 1 [Homo sapiens].	193	3e-49	O
RALYL	RNA-binding Raly-like protein isoform 2 [Homo sapiens].	193	3e-49	O
RALYL	RNA-binding Raly-like protein isoform 2 [Homo sapiens].	193	3e-49	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Hnrnpc heterogeneous nuclear ribonucleoproteins C1/C2 isoform 1 [Mus musculus]. 324 9e-89 O

Hnrnpc heterogeneous nuclear ribonucleoproteins C1/C2 isoform 4 [Mus musculus]. 317 2e-86 O

Hnrnpc heterogeneous nuclear ribonucleoproteins C1/C2 isoform 3 [Mus musculus]. 312 5e-85 O

Hnrnpc heterogeneous nuclear ribonucleoproteins C1/C2 isoform 2 [Mus musculus]. 309 3e-84 O

Hnrnpc heterogeneous nuclear ribonucleoproteins C1/C2 isoform 2 [Mus musculus]. 309 3e-84 O

Ralyl RNA-binding Raly-like protein isoform a [Mus musculus]. 192 4e-49 O

Ralyl RNA-binding Raly-like protein isoform a [Mus musculus]. 192 4e-49 O

Raly RNA-binding protein Raly long isoform [Mus musculus]. 175 9e-44 O

Raly RNA-binding protein Raly short isoform [Mus musculus]. 161 1e-39 O

Raly RNA-binding protein Raly short isoform [Mus musculus]. 161 1e-39 O

Locus	Definition	Score	E value	FL
Hnrnpc	heterogeneous nuclear ribonucleoproteins C1/C2 isoform 1 [Mus musculus].	324	9e-89	O
Hnrnpc	heterogeneous nuclear ribonucleoproteins C1/C2 isoform 4 [Mus musculus].	317	2e-86	O
Hnrnpc	heterogeneous nuclear ribonucleoproteins C1/C2 isoform 3 [Mus musculus].	312	5e-85	O
Hnrnpc	heterogeneous nuclear ribonucleoproteins C1/C2 isoform 2 [Mus musculus].	309	3e-84	O
Hnrnpc	heterogeneous nuclear ribonucleoproteins C1/C2 isoform 2 [Mus musculus].	309	3e-84	O
Ralyl	RNA-binding Raly-like protein isoform a [Mus musculus].	192	4e-49	O
Ralyl	RNA-binding Raly-like protein isoform a [Mus musculus].	192	4e-49	O
Raly	RNA-binding protein Raly long isoform [Mus musculus].	175	9e-44	O
Raly	RNA-binding protein Raly short isoform [Mus musculus].	161	1e-39	O
Raly	RNA-binding protein Raly short isoform [Mus musculus].	161	1e-39	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC475399 PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 19 [Canis familiaris]. 336 3e-92 O

LOC475399 PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 22 [Canis familiaris]. 336 3e-92 O

LOC475399 PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 21 [Canis familiaris]. 336 3e-92 O

LOC475399 PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 20 [Canis familiaris]. 336 3e-92 O

LOC475399 PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 3 [Canis familiaris]. 332 5e-91 O

LOC475399 PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 24 [Canis familiaris]. 321 9e-88 O

LOC475399 PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 1 [Canis familiaris]. 321 9e-88 O

LOC475399 PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 27 [Canis familiaris]. 321 9e-88 O

LOC475399 PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 26 [Canis familiaris]. 321 9e-88 O

LOC475399 PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 25 [Canis familiaris]. 321 9e-88 O

Locus	Definition	Score	E value	FL
LOC475399	PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 19 [Canis familiaris].	336	3e-92	O
LOC475399	PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 22 [Canis familiaris].	336	3e-92	O
LOC475399	PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 21 [Canis familiaris].	336	3e-92	O
LOC475399	PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 20 [Canis familiaris].	336	3e-92	O
LOC475399	PREDICTED: similar to Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 / hnRNP C2) isoform 3 [Canis familiaris].	332	5e-91	O
LOC475399	PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 24 [Canis familiaris].	321	9e-88	O
LOC475399	PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 1 [Canis familiaris].	321	9e-88	O
LOC475399	PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 27 [Canis familiaris].	321	9e-88	O
LOC475399	PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 26 [Canis familiaris].	321	9e-88	O
LOC475399	PREDICTED: similar to heterogeneous nuclear ribonucleoprotein C isoform b isoform 25 [Canis familiaris].	321	9e-88	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
HNRNPC heterogeneous nuclear ribonucleoprotein C [Bos taurus]. 321 9e-88 O

RALYL RNA-binding Raly-like protein [Bos taurus]. 191 1e-48 O

RALY RNA-binding protein Raly [Bos taurus]. 162 7e-40 O

RBM14 RNA-binding protein 14 [Bos taurus]. 52 1e-06

RBMX heterogeneous nuclear ribonucleoprotein G [Bos taurus]. 50.8 3e-06 O

Locus	Definition	Score	E value	FL
HNRNPC	heterogeneous nuclear ribonucleoprotein C [Bos taurus].	321	9e-88	O
RALYL	RNA-binding Raly-like protein [Bos taurus].	191	1e-48	O
RALY	RNA-binding protein Raly [Bos taurus].	162	7e-40	O
RBM14	RNA-binding protein 14 [Bos taurus].	52	1e-06
RBMX	heterogeneous nuclear ribonucleoprotein G [Bos taurus].	50.8	3e-06	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 [Sus scrofa]. 346 2e-95 O

HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 [Sus scrofa]. 323 2e-88 O

LOC100514690 PREDICTED: RNA-binding protein Raly-like isoform 1 [Sus scrofa]. 181 7e-46 O

RALY PREDICTED: RNA-binding protein Raly [Sus scrofa]. 181 7e-46 O

RALY PREDICTED: RNA-binding protein Raly isoform 1 [Sus scrofa]. 181 7e-46 O

RALY PREDICTED: RNA-binding protein Raly isoform 2 [Sus scrofa]. 162 5e-40 O

LOC100523119 PREDICTED: RNA-binding Raly-like protein-like [Sus scrofa]. 139 4e-33 O

RBMX PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1 [Sus scrofa]. 50.8 2e-06 O

LOC100622326 PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like [Sus scrofa]. 50.8 2e-06 O

Locus	Definition	Score	E value	FL
HNRNPC	heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 [Sus scrofa].	346	2e-95	O
HNRNPC	heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 [Sus scrofa].	323	2e-88	O
LOC100514690	PREDICTED: RNA-binding protein Raly-like isoform 1 [Sus scrofa].	181	7e-46	O
RALY	PREDICTED: RNA-binding protein Raly [Sus scrofa].	181	7e-46	O
RALY	PREDICTED: RNA-binding protein Raly isoform 1 [Sus scrofa].	181	7e-46	O
RALY	PREDICTED: RNA-binding protein Raly isoform 2 [Sus scrofa].	162	5e-40	O
LOC100523119	PREDICTED: RNA-binding Raly-like protein-like [Sus scrofa].	139	4e-33	O
RBMX	PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1 [Sus scrofa].	50.8	2e-06	O
LOC100622326	PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like [Sus scrofa].	50.8	2e-06	O

Assembly Members: 4 TOP

Library Plate Loc. Read Name Accession Full Seq.

AMP01 0080 C02 AMP01_0080_C02.b BW960760
AMP01 0100 H01 AMP01_0100_H01.b BW962515
MLN01 0100 D11 MLN01_0100_D11.b CJ015710
OVRT1 0123 C03 OVRT1_0123_C03.b HX236654 AK400683

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
652 A 2 0 0.500 W S GGA/G
G 2 0 0.500 GGG/G

Alignment: TOP

20110601C-007336 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
OVRT1_0123_C03.b :   nnnnnccgtcagctgtagxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0100_D11.b : ngtagtgacttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0080_C02.b :                                                             
AMP01_0100_H01.b :                                                             


20110601C-007336 : ...............TTTGTGAAGAGGCGAAGACTGAGCGGTTGCGGCGGTGTTGCCGAC
                   ---------+---------+---------+---------+---------+---------+ 45
OVRT1_0123_C03.b : xxxxxxxxxxxxxxxTTTGTGAAGAGGCGAAGACTGAGCGGTTGCGGCGGTGTTGCCGAC
MLN01_0100_D11.b : xxxxxxxxxxxxxxxxTTGTGAAGAGGCGAAGACTGAGCGGTTGCGGCGGTGTTGCCGAC
AMP01_0080_C02.b :                                                             
AMP01_0100_H01.b :                                                             


20110601C-007336 : CTCGAGCAGCAGTCCGCTTCTCCACGTAGAACCCGGGAGTAGGAGATTCAGAATCGAATC
                   ---------+---------+---------+---------+---------+---------+ 105
OVRT1_0123_C03.b : CTCGAGCAGCAGTCCGCTTCTCCACGTAGAACCCGGGAGTAGGAGATTCAGAATCGAATC
MLN01_0100_D11.b : CTCGAGCAGCAGTCCGCTTCTCCACGTAGAACCCGGGAGTAGGAGATTCAGAATCGAATC
AMP01_0080_C02.b :                                                             
AMP01_0100_H01.b :                                                             


20110601C-007336 : TCTTCTCCCTCCCCCCTCCTGTTTTTCGGCTTTGTGAATTACCTTATCATCAAAGACAAT
                   ---------+---------+---------+---------+---------+---------+ 165
OVRT1_0123_C03.b : TCTTCTCCCTCCCCCCTCCTGTTTTTCGGCTTTGTGAATTACCTTATCATCAAAGACAAT
MLN01_0100_D11.b : TCTTCTCCCTCCCCCCTCCTGTTTTTCGGCTTTGTGAATTACCTTATCATCAAAGACAAT
AMP01_0080_C02.b :                                                             
AMP01_0100_H01.b :                                                             


20110601C-007336 : GGCCAGCAACGTTACCAACAAGACAGATCCTCGCTCCATGAATTCCCGTGTATTCATTGG
                   ---------+---------+---------+---------+---------+---------+ 225
OVRT1_0123_C03.b : GGCCAGCAACGTTACCAACAAGACAGATCCTCGCTCCATGAATTCCCGTGTATTCATTGG
MLN01_0100_D11.b : GGCCAGCAACGTTACCAACAAGACAGATCCTCGCTCCATGAATTCCCGTGTATTCATTGG
AMP01_0080_C02.b :                                                             
AMP01_0100_H01.b :                                                             


20110601C-007336 : GAATCTCAATACTCTTGTGGTCAAGAAATCTGATGTGGAGGCAATCTTCTCAAAATATGG
                   ---------+---------+---------+---------+---------+---------+ 285
OVRT1_0123_C03.b : GAATCTCAATACTCTTGTGGTCAAGAAATCTGATGTGGAGGCAATCTTCTCAAAATATGG
MLN01_0100_D11.b : GAATCTCAATACTCTTGTGGTCAAGAAATCTGATGTGGAGGCAATCTTCTCAAAATATGG
AMP01_0080_C02.b :                                                             
AMP01_0100_H01.b :                                                             


20110601C-007336 : CAAAATCGTGGGTTGCTCTGTTCATAAGGGCTTTGCCTTCGTTCAGTACGTTAATGAGAG
                   ---------+---------+---------+---------+---------+---------+ 345
OVRT1_0123_C03.b : CAAAATCGTGGGTTGCTCTGTTCATAAGGGCTTTGCCTTCGTTCAGTACGTTAATGAGAG
MLN01_0100_D11.b : CAAAATCGTGGGTTGCTCTGTTCATAAGGGCTTTGCCTTCGTTCAGTACGTTAATGAGAG
AMP01_0080_C02.b :          actatagccgtacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0100_H01.b :    gtcgctaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-007336 : AAATGCTCGAGCTGCTGTTGCAGGAGAGGATGGCCGAATGATTGCTGGCCAGGTTTTAGA
                   ---------+---------+---------+---------+---------+---------+ 405
OVRT1_0123_C03.b : AAATGCTCGAGCTGCTGTTGCAGGAGAGGATGGCCGAATGATTGCTGGCCAGGTTTTAGA
MLN01_0100_D11.b : AAATGCTCGAGCTGCTGTTGCAGGAGAGGATGGCCGAATGATTGCTGGCCAGGTTTTAGA
AMP01_0080_C02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0100_H01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-007336 : TATTAATCTGGCTGCAGAGCCAAAAGTGAACCGAGGAAAGGCAGGTGTGAAACGATCTGC
                   ---------+---------+---------+---------+---------+---------+ 465
OVRT1_0123_C03.b : TATTAATCTGGCTGCAGAGCCAAAAGTGAACCGAGGAAAGGCAGGTGTGAAACGATCTGC
MLN01_0100_D11.b : TATTAATCTGGCTGCAGAGCCAAAAGTGAACCGAGGAAAGGCAGGTGTGAAACGATCTGC
AMP01_0080_C02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAACGATCTGC
AMP01_0100_H01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAACGATCTGC


20110601C-007336 : AGCGGAGATGTACGGGTCAGTACCAGAACACCCTTCTCCGTCCCCTCTACTCAGCTCCTC
                   ---------+---------+---------+---------+---------+---------+ 525
OVRT1_0123_C03.b : AGCGGAGATGTACGGGTCAGTACCAGAACACCCTTCTCCGTCCCCTCTACTCAGCTCCTC
MLN01_0100_D11.b : AGCGGAGATGTACGGGTCAGTACCAGAACACCCTTCTCCGTCCCCTCTACTCAGCTCCTC
AMP01_0080_C02.b : AGCGGAGATGTACGGGTCAGTACCAGAACACCCTTCTCCGTCCCCTCTACTCAGCTCCTC
AMP01_0100_H01.b : AGCGGAGATGTACGGGTCAGTACCAGAACACCCTTCTCCGTCCCCTCTACTCAGCTCCTC


20110601C-007336 : TTTTGACTTGGACTATGACTTTCAACGGGATTATTATGACAGGATGTACAGTTACCCAGC
                   ---------+---------+---------+---------+---------+---------+ 585
OVRT1_0123_C03.b : TTTTGACTTGGACTATGACTTTCAACGGGATTATTATGACAGGATGTACAGTTACCCAGC
MLN01_0100_D11.b : TTTTGACTTGGACTATGACTTTCAACGGGATTATTATGACAGGATGTACAGTTACCCAGC
AMP01_0080_C02.b : TTTTGACTTGGACTATGACTTTCAACGGGATTATTATGACAGGATGTACAGTTACCCAGC
AMP01_0100_H01.b : TTTTGACTTGGACTATGACTTTCAACGGGATTATTATGACAGGATGTACAGTTACCCAGC


20110601C-007336 : ACGTGTTCCTCCTCCTCCTCCTATTGCTCGGGCTGTAGTGCCCTCAAAACGCCAGCGTGT
                   ---------+---------+---------+---------+---------+---------+ 645
OVRT1_0123_C03.b : ACGTGTTCCTCCTCCTCCTCCTATTGCTCGGGCTGTAGTGCCCTCAAAACGCCAGCGTGT
MLN01_0100_D11.b : ACGTGTTCCTCCTCCTCCTCCTATTGCTCGGGCTGTAGTGCCCTCAAAACGCCAGCGTGT
AMP01_0080_C02.b : ACGTGTTCCTCCTCCTCCTCCTATTGCTCGGGCTGTAGTGCCCTCAAAACGCCAGCGTGT
AMP01_0100_H01.b : ACGTGTTCCTCCTCCTCCTCCTATTGCTCGGGCTGTAGTGCCCTCAAAACGCCAGCGTGT


20110601C-007336 : ATCAGGGAACACCTCACGAAGGGGCAAAAGTGGCTTCAATTCTAAGAGTGGACAGCGGGG
                   ---------+---------+---------+---------+---------+---------+ 705
OVRT1_0123_C03.b : ATCAGGAAACACCTCACGAAGGGGCAAAAGCGGCTTCAATTCTAAGAGTGGACAGCGGGG
MLN01_0100_D11.b : ATCAGGAAACACCTCACGAAGGGGCAAAAGTGGCTTCAATTCTAAGAGTGGACAGCGGGG
AMP01_0080_C02.b : ATCAGGGAACACCTCACGAAGGGGCAAAAGTGGCTTCAATTCTAAGAGTGGACAGCGGGG
AMP01_0100_H01.b : ATCAGGGAACACCTCACGAAGGGGCAAAAGTGGCTTCAATTCTAAGAGTGGACAGCGGGG


20110601C-007336 : ATCATCTTCTAAGTCTGGAAAGTTAAAAGGAGATGACCTCCAGGCCATTAAGAAGGAGTT
                   ---------+---------+---------+---------+---------+---------+ 765
OVRT1_0123_C03.b : ATCATCTTCTAAGTCTGGAAAGTTA*AAGGAGATGACCTTCAGGCCATTAAGAAGGAGTT
MLN01_0100_D11.b : ATCATCTTCTAAGTCTGGAAAGTTAAAAGGAGATGACCTTCAGGCCATTAAGAAGGAGTT
AMP01_0080_C02.b : ATCATCTTCTAAGTCTGGAAAGTTAAAAGGAGATGACCTCCAGGCCATTAAGAAGGAGTT
AMP01_0100_H01.b : ATCATCTTCTAAGTCTGGAAAGTTAAAAGGAGATGACCTCCAGGCCATTAAGAAGGAGTT


20110601C-007336 : GACCCAGATAAAACAAAAAGTGGATTCTCTACTGGAAAGCCTGGAAAAAATCGAAAAGGA
                   ---------+---------+---------+---------+---------+---------+ 825
OVRT1_0123_C03.b : GACCCAGATAAAACAAAAAGTGGATTCTCTACTGGAAAGCCGGGAAAAA*TCGAAAAGGA
MLN01_0100_D11.b : GACCCAGATAAAACAA*AAGTGGATTCTCTACTGGAAAGCCTGGAAAAAATCGAAAAGGA
AMP01_0080_C02.b : GACCCAGATAAAACAAAAAGTGGATTCTCTACTGGAAAGCCTGGAAAAAATCGAAAAGGA
AMP01_0100_H01.b : GACCCAGATAAAACAAAAAGTGGATTCTCTACTGGAAAGCCTGGAAAAAATCGAAAAGGA


20110601C-007336 : ACAGAGCAAACAAGGAG***AGATGAAGAATGATAAGTCAGAAGAGGAGCAGAGCAGCAG
                   ---------+---------+---------+---------+---------+---------+ 882
OVRT1_0123_C03.b : ACAGAANCAACAAGGAG***AGATGAAGAATGATAAGTCAGAGGAGGAGCAGAGCCAGCG
MLN01_0100_D11.b : ACAGAAGCAAACAGGAGTAGAGATGAAGAATGGTAAGTCAGAAGAaggagcaagcagcca
AMP01_0080_C02.b : ACAGAGCAAACAAGGAG***AGATGAAGAATGATAAGTCAGAAGAGGAGCAGAGCAGCAG
AMP01_0100_H01.b : ACAGAGCAAACAAGGAG***AGATGAAGAATGATAAGTCAGAAGAGGAGCAGAGCAGCAG


20110601C-007336 : CTCCCAGAAGAAAGATGAGACTAATGTGAAGATGGAGTCTGAGGGGGGTGCAGATGACTC
                   ---------+---------+---------+---------+---------+---------+ 942
OVRT1_0123_C03.b : CTCCCAGAAGAAAGATGAGACTAATGTGAAGATGGAGTCTGAGGGGGGTGCAAATGACTC
MLN01_0100_D11.b : cctcccgaaaaaagatgaaactaatgtgaaaatggattctgagggggggcaaaagactct
AMP01_0080_C02.b : CTCCCAGAAGAAAGATGAGACTAATGTGAAGATGGAGTCTGAGGGGGGTGCAGATGACTC
AMP01_0100_H01.b : CTCCCAGAAGAAAGATGAGACTAATGTGAAGATGGAGTCTGAGGGGGGTGCAGATGACTC


20110601C-007336 : TGCTGAGGAGGGGGACCTACTGGATGATGATGATAATGAAGATCGGGGGGATGACCAGCT
                   ---------+---------+---------+---------+---------+---------+ 1002
OVRT1_0123_C03.b : TGCTGAGGAGGGGAACCTACTGGATGAagagaataagaaaatcggggggaagacagcttg
MLN01_0100_D11.b : gctgaaggagggggacctcctggattaagaatgatatgaaaaatggggggaatgaccacc
AMP01_0080_C02.b : TGCTGAGGAGGGGGACCTACTGGATGATGATGATAATGAAGATCGGGGGGATGACCAGCT
AMP01_0100_H01.b : TGCTGAGGAGGGGGACCTACTGGATGATGATGATAATGAAGATCGGGGGGATGACCAGCT


20110601C-007336 : GGAGTTGATCAAGGATGATGAAAAAGAGGCTGAGGAAGGAGGGGATGACAGAGACAGCGC
                   ---------+---------+---------+---------+---------+---------+ 1062
OVRT1_0123_C03.b : gattgatcagggtgataaaaaaaggtgaggaaggaaagtgaaaaaacgccccatggggag
MLN01_0100_D11.b : tgtgatttatttcggtatgaataaaaaaaagccttaggataggaaaggaattaccaaacc
AMP01_0080_C02.b : GGAGTTGATCAAGGATGATGAAAAAGAGGCTGAGGAAGGAGGGGATGACAGAGACAGCGC
AMP01_0100_H01.b : GGAGTTGATCAAGGATGATGAAAAAGAGGCTGAGGAAGGAGGGGATGACAGAGACAGCGC


20110601C-007336 : CAATGGCGAGGATGACTCTTAAGCACATAGTGGGGTTTAGAAATCTTGTCCCATTATTTC
                   ---------+---------+---------+---------+---------+---------+ 1122
OVRT1_0123_C03.b : aaaaacttaagccatggggggttaaaaatttggccattattctatccagggcctgtcaaa
MLN01_0100_D11.b : cgccgcccatgggcaaggatgaatccttaaaccactatgtggggtttaaaaattcttgtc
AMP01_0080_C02.b : CAATGGCGAGGATGACTCTTAAGCACATAGTGGGGTTTAGAAATCTTGTCCCATTATTTC
AMP01_0100_H01.b : CAATGGCGAGGATGACTCTTAAGCACATAGTGGGGTTTAGAAATCTTGTCCCATTATTTC


20110601C-007336 : TTTACCTAGGCGCTTGTCTAAGATCAAAATTTTCACCAGATCCTCTCCCCTAGTATCTTC
                   ---------+---------+---------+---------+---------+---------+ 1182
OVRT1_0123_C03.b : aaaaatttcccaaaatcccccctgaattttcgaagggcccgggtccccccctggtctccg
MLN01_0100_D11.b : ccattatttcttttccgagggccctggtttaaaataacaaattttcaccaaatcctctcc
AMP01_0080_C02.b : TTTACCTAGGCGCTTGTCTAAGATCAAAATTTTCACCAGATCCTCTCCCCTAGTATCTTC
AMP01_0100_H01.b : TTTACCTAGGCGCTTGTCTAAGATCAAAATTTTCACCAGATCCTCTCCCCTAGTATCTTC


20110601C-007336 : AGCACATGCTCACTGTTCTCCCCATCCTTGTCCTTCCCATGTTCATTAATTCATATTGCC
                   ---------+---------+---------+---------+---------+---------+ 1242
OVRT1_0123_C03.b : gtttatatatagtgcggccgaccctttcttttggccccggggtagtagctcccggttttg
MLN01_0100_D11.b : ccaataattc                                                 
AMP01_0080_C02.b : AGCACATGCTCACTGTTCTCCCCATCCNTGTCCCTCCCATGNTCAATAATTCATATTGCC
AMP01_0100_H01.b : AGCACATGCTCACTGTTCTCCCCATCCTTGTCCTTCCCATGTTCATTAATTCATATTGCC


20110601C-007336 : CTGCGCCTAGTCCCATTTTCACTTCTTTGACGCTCCTGGTAGTTATGTAAAGTCCTTACC
                   ---------+---------+---------+---------+---------+---------+ 1302
OVRT1_0123_C03.b : ttttttgcaactttacaaaaagagggtgtttttttctcaaattgtggggagattttctat
MLN01_0100_D11.b :                                                             
AMP01_0080_C02.b : CCGCGCCTAGTCCCATTTTCACTTCTTTGACGCTCCTGGTAGTTATGTAAagtcttaccc
AMP01_0100_H01.b : CTGCGCCTAGTCCCATTTTCACTTCTTTGACGCTCCTGGTAGTTATGTTAAGTCCTTACC


20110601C-007336 : CTGTAATTTTTGCTTTTAAATTTGAATACCTCTTTATGAATTTACCAATAAAAAGGATGT
                   ---------+---------+---------+---------+---------+---------+ 1362
OVRT1_0123_C03.b : tgtgttttctcagcatctgtggccaacactaggggcccaggggggccattttgtggggcc
MLN01_0100_D11.b :                                                             
AMP01_0080_C02.b : ctgtatttttgcctttaatttttgatactccttatgacctaaccataaaaaggatgtatc
AMP01_0100_H01.b : CTGTAATTTTTGCTTTTAAATTTGAATACCTCTTTATGAATTTACCAATAAAAAGGATGT


20110601C-007336 : TTCCTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA......................
                   ---------+---------+---------+---------+---------+---------+ 1400
OVRT1_0123_C03.b : caaaaattttgtggttgttcttaaaaggcggctatagcnnn                  
MLN01_0100_D11.b :                                                             
AMP01_0080_C02.b : gttttgaancnnnnnanananaaaaaaannnncccxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0100_H01.b : TTCCTTTTGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacatggtcggcccccctcggcc


20110601C-007336 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1400
OVRT1_0123_C03.b :                                                             
MLN01_0100_D11.b :                                                             
AMP01_0080_C02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtaag
AMP01_0100_H01.b : ccccgaaaaccttttctaaaccttttcttttgggcccccgggcccccgaagggaaaatga


20110601C-007336 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1400
OVRT1_0123_C03.b :                                                             
MLN01_0100_D11.b :                                                             
AMP01_0080_C02.b : gaatctgggcagactaggctggatcccccaaaaaaagccgggggcaccgagttttgaaaa
AMP01_0100_H01.b : aactggggccaatagccggttttcccaagggaaattcccgggccctgaaccatagggttt


20110601C-007336 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1400
OVRT1_0123_C03.b :                                                             
MLN01_0100_D11.b :                                                             
AMP01_0080_C02.b : tcaagggattcagggcttctggttttaacgggcccaggatctataatttcccccctgccc
AMP01_0100_H01.b : tgggaatttccccccaaaaaaaaaaaaaaccccccccgggggggccaccccccaaacgcg


20110601C-007336 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1400
OVRT1_0123_C03.b :                                                             
MLN01_0100_D11.b :                                                             
AMP01_0080_C02.b : cccccgatgtttattttactctgccaaaacccac                         
AMP01_0100_H01.b : gttttttggaaaaaaaaaaaactcccccgaaggggggaggattttttttttgggaagggt


20110601C-007336 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1400
OVRT1_0123_C03.b :                                                             
MLN01_0100_D11.b :                                                             
AMP01_0080_C02.b :                                                             
AMP01_0100_H01.b : gtgttcgtatt