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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-007684

Length: 1,055

Sequence:  [FASTA format sequence]
TGTGGCTAGC CGTTTCCGGT GGAGTCGCCG CGGAGCCGCT ATCGCTGTGT GCAGCCGGGC
TGGGAGGGAA ACGCTGAGGG AGCTCAGCAA GCCGTCACCT CACACCGGTA ATCCCGTGCC
CGCCGCCGTC TGTCCCCAGG GAACCATGGC GTCTGGCAGC ACCGCCAGTG AGGAGGAGCG
TAGCCTCCGG GAATGTGAGC TCTACGTCCA GAAGCACAAC ATTCAGGCCC TGCTCAAGGA
TTCTATCGTG CAGTTGTGCA CTGCGCGGCC CGAGAGACCC ATGGCATTCC TCAGGGAATA
CTTCGAGAGG TTGGAGAAGG AGGAGGCAAA GCAGATCCAG AATCTGCAGA AAGCAAGTGC
CCGGGCAGAC TCGAGGGAGG ATGAAATCTC TCCTCCTCCA CCCAACCCAG TGGTAAAGGG
CCGAAGGCGA CGAGGTGCTA TCAGTGCTGA GGTCTATACG GAGGAAGATG CTGCATCATA
TGTTAGAAAG GTTATACCAA AAGATTATAA GACAATGGCT GCTTTAGCTA AAGCCATTGA
AAAGAATGTA CTGTTTTCAC ATCTTGATGA TAATGAGAGA AGTGATATTT TTGATGCCAT
GTTTCCGGTT TCCTTTATTG CTGGAGAGAC TGTTATTCAG CAAGGTGATG AAGGGGATAA
CTTCTATGTG ATTGATCAAG GAGAGATGGA TGTCTACGTC AACAATGAGT GGGCAACCAG
TGTTGGGGAA GGAGGAAGCT TTGGAGAACT TGCTCTGATT TATGGTACAC CTAGAGCAGC
CACTGTCAAG GCAAAGACAA ATGTGAAATT GTGGGGTATT GACCGAGACA GCTACAGAAG
AATCCTTATG GGAAGCACGC TGAGAAAGCG GAAGATGTAT GAGGAGTTTC TTAGTAAAGT
GTCTATTTTA GAATCTCTGG ACAAGTGGGA ACGTCTTACT GTTGCTGATG CGTTGGAACC
AGTCCAGTTT GAAGATGGAC AGAAGATTGT GGTGCAGGGA GAACAGGGGA CGAGTTCTTC
ATTATTTAGA GGGTTCGGCT GCTGTACTAC AGCGT

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		PRKAR1A	cAMP-dependent protein kinase type I-alpha regulatory subunit [Homo sapiens].	521	e-148	O
		PRKAR1A	cAMP-dependent protein kinase type I-alpha regulatory subunit [Homo sapiens].	521	e-148	O
		PRKAR1A	cAMP-dependent protein kinase type I-alpha regulatory subunit [Homo sapiens].	521	e-148	O
		PRKAR1B	cAMP-dependent protein kinase type I-beta regulatory subunit [Homo sapiens].	451	e-127	O
		PRKAR1B	cAMP-dependent protein kinase type I-beta regulatory subunit [Homo sapiens].	451	e-127	O
		PRKAR1B	cAMP-dependent protein kinase type I-beta regulatory subunit [Homo sapiens].	451	e-127	O
		PRKAR1B	cAMP-dependent protein kinase type I-beta regulatory subunit [Homo sapiens].	451	e-127	O
		PRKAR1B	cAMP-dependent protein kinase type I-beta regulatory subunit [Homo sapiens].	451	e-127	O
		PRKAR1B	cAMP-dependent protein kinase type I-beta regulatory subunit [Homo sapiens].	451	e-127	O
		PRKAR2A	cAMP-dependent protein kinase type II-alpha regulatory subunit [Homo sapiens].	163	2e-40	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Prkar1a	cAMP-dependent protein kinase type I-alpha regulatory subunit [Mus musculus].	518	e-147	O
		Prkar1b	cAMP-dependent protein kinase type I-beta regulatory subunit [Mus musculus].	452	e-127	O
		Prkar2a	cAMP-dependent protein kinase type II-alpha regulatory subunit [Mus musculus].	160	2e-39	O
		Prkar2b	cAMP-dependent protein kinase type II-beta regulatory subunit [Mus musculus].	157	1e-38	O
		Prkg1	cGMP-dependent protein kinase 1 beta isoform [Mus musculus].	120	1e-27	O
		Prkg1	cGMP-dependent protein kinase 1 alpha isoform [Mus musculus].	120	2e-27	O
		Prkg2	cGMP-dependent protein kinase 2 [Mus musculus].	112	5e-25	O
		Rapgef3	rap guanine nucleotide exchange factor 3 isoform 2 [Mus musculus].	54.3	2e-07
		Rapgef3	rap guanine nucleotide exchange factor 3 isoform 3 [Mus musculus].	54.3	2e-07
		Rapgef3	rap guanine nucleotide exchange factor 3 isoform 1 [Mus musculus].	54.3	2e-07

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC480459	PREDICTED: similar to cAMP-dependent protein kinase type I-alpha regulatory subunit (Tissue-specific extinguisher-1) (TSE1) isoform 1 [Canis familiaris].	532	e-151	O
		LOC480459	PREDICTED: similar to cAMP-dependent protein kinase type I-alpha regulatory subunit (Tissue-specific extinguisher-1) (TSE1) isoform 4 [Canis familiaris].	532	e-151	O
		LOC480459	PREDICTED: similar to cAMP-dependent protein kinase type I-alpha regulatory subunit isoform 3 [Canis familiaris].	505	e-143	O
		LOC480459	PREDICTED: similar to protein kinase, cAMP dependent regulatory, type I, alpha isoform 2 [Canis familiaris].	503	e-142	O
		LOC480805	PREDICTED: similar to protein kinase, cAMP-dependent, regulatory, type I, beta isoform 1 [Canis familiaris].	453	e-127	O
		LOC480805	PREDICTED: similar to protein kinase, cAMP-dependent, regulatory, type I, beta isoform 3 [Canis familiaris].	441	e-124	O
		LOC475887	PREDICTED: similar to cAMP-dependent protein kinase type II-beta regulatory subunit isoform 9 [Canis familiaris].	166	3e-41	O
		LOC484774	PREDICTED: similar to cAMP-dependent protein kinase type II-alpha regulatory subunit isoform 1 [Canis familiaris].	162	6e-40	O
		LOC475887	PREDICTED: similar to cAMP-dependent protein kinase, regulatory subunit beta 2 isoform 10 [Canis familiaris].	161	8e-40	O
		LOC475887	PREDICTED: similar to cAMP-dependent protein kinase type II-beta regulatory subunit isoform 8 [Canis familiaris].	161	1e-39	O

BLAST on RefSeq (Cattle):      TOP