Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-008120

Sequence: [FASTA format sequence] GCTACAACGC CGAGGGGAGC TGAAGCTGCG TCTGGGCAGC CAGGCTAGGC CAGGAAGACC ATGTGAATGG GGCCAGAGGG CTCCTGGGCT GGGCAGGGAC CATGGGCTGT AGCTGCAGCT CAAACCCTGA AGATGACTGG ATGGAAAACA TCGACGTATG TGAGAACTGC CATTACCCCA TAGTCCCACT GGATGGCAAG GCCACGCTGC CCATGCGGAA TGGCTCTGAA GTTCGGGATC CACTGGTCAC CTATGAGGGC TCCAACCCCC CAGCCTCTCC ACTGCAAGAC AACCTGGTGA TCGCCCTGCA CAGCTATGAG CCTTCTCACG ATGGAGACCT GGGCTTCGAG AAGGGTGAAC AGCTACGTAT ATTAGAGCAG AACGGCGAGT GGTGGAAAGC ACAGTCCCTG ACCACGGGCC TGGAAGGTTT CATCCCTTTC AACTTCGTGG CCAAAGCAAA CAGCCTTGAG CCGGAACCCT GGTTCTTCAA GAATCTGAGC CGCAAGGATG CGGAGAGGCA GCTTTTGGCG CCAGGGAACA CGCACGGCTC CTTCCTGATC CGGGAGAGCG AGAGCACAGC GGGATCCTTT TCATTGTCCG TCCGGGACTT CGACCAGAAC CAAGGAGAAG TGGTGAAACA TTACAAGATC CGTAACCTGG ACAAAGGCGG CTTCTACATC TCTCCCCGCA TCACTTTTCC TGGCTTGCAC GAACTGGTCC ATCATTACAC GAATTCTTCG GACGGGTTGT GCACGCGATT GAACCGGCCC TGCCAGACCC AGAAGCCCCA GAAGCCTTGG TGGGAGGACG AGTGGGAAGT TCCCAGGGAG ACGCTGAAGC TGGTGGAGCG GCTGGGGGCT GGCCAGTTCG GGGAGGTGTG GATGGGGTAC TACAACGGGC ACACGAAGGT GGCAGTAAAG AGCCTGAAGC AGGGCAGCAT GTCCCCCGAT GCCTTCCTGG CCGAGGCCAA CCTCATGAAG CAGCTGCAAC ACCAGCGACT GGTCCGGCTC TATGCGGTGG TCACCCAGGA ACCCATCTAC ATCATCACCG GATACATGGA GAATGGGAAC CTGGTGGAAT TTCTCCAAAA CTCCCCAGGC ATTCAGCTGA CCATTCACAA ATTCTTGGAA GGGGCAGCCC AAATTGCA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
LCK tyrosine-protein kinase Lck precursor [Homo sapiens]. 681 0.0 O

LCK tyrosine-protein kinase Lck precursor [Homo sapiens]. 681 0.0 O

LYN tyrosine-protein kinase Lyn isoform A [Homo sapiens]. 392 e-109 O

LYN tyrosine-protein kinase Lyn isoform B [Homo sapiens]. 389 e-108 O

HCK tyrosine-protein kinase HCK isoform b [Homo sapiens]. 387 e-108 O

HCK tyrosine-protein kinase HCK isoform b [Homo sapiens]. 387 e-108 O

HCK tyrosine-protein kinase HCK isoform a [Homo sapiens]. 387 e-108 O

HCK tyrosine-protein kinase HCK isoform e [Homo sapiens]. 387 e-108 O

HCK tyrosine-protein kinase HCK isoform c [Homo sapiens]. 386 e-107 O

HCK tyrosine-protein kinase HCK isoform d [Homo sapiens]. 386 e-107 O

Locus	Definition	Score	E value	FL
LCK	tyrosine-protein kinase Lck precursor [Homo sapiens].	681	0.0	O
LCK	tyrosine-protein kinase Lck precursor [Homo sapiens].	681	0.0	O
LYN	tyrosine-protein kinase Lyn isoform A [Homo sapiens].	392	e-109	O
LYN	tyrosine-protein kinase Lyn isoform B [Homo sapiens].	389	e-108	O
HCK	tyrosine-protein kinase HCK isoform b [Homo sapiens].	387	e-108	O
HCK	tyrosine-protein kinase HCK isoform b [Homo sapiens].	387	e-108	O
HCK	tyrosine-protein kinase HCK isoform a [Homo sapiens].	387	e-108	O
HCK	tyrosine-protein kinase HCK isoform e [Homo sapiens].	387	e-108	O
HCK	tyrosine-protein kinase HCK isoform c [Homo sapiens].	386	e-107	O
HCK	tyrosine-protein kinase HCK isoform d [Homo sapiens].	386	e-107	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Lck proto-oncogene tyrosine-protein kinase LCK isoform a [Mus musculus]. 673 0.0 O

Lck proto-oncogene tyrosine-protein kinase LCK isoform b [Mus musculus]. 671 0.0 O

Lck proto-oncogene tyrosine-protein kinase LCK isoform b [Mus musculus]. 671 0.0 O

Lyn tyrosine-protein kinase Lyn isoform B [Mus musculus]. 386 e-107 O

Lyn tyrosine-protein kinase Lyn isoform A [Mus musculus]. 386 e-107 O

Hck tyrosine-protein kinase HCK isoform p56Hck [Mus musculus]. 378 e-105 O

Hck tyrosine-protein kinase HCK isoform p59Hck [Mus musculus]. 378 e-105 O

Gm11787 PREDICTED: tyrosine-protein kinase Lyn-like [Mus musculus]. 375 e-104 O

Blk tyrosine-protein kinase Blk [Mus musculus]. 367 e-102 O

Fyn tyrosine-protein kinase Fyn isoform a [Mus musculus]. 321 8e-88 O

Locus	Definition	Score	E value	FL
Lck	proto-oncogene tyrosine-protein kinase LCK isoform a [Mus musculus].	673	0.0	O
Lck	proto-oncogene tyrosine-protein kinase LCK isoform b [Mus musculus].	671	0.0	O
Lck	proto-oncogene tyrosine-protein kinase LCK isoform b [Mus musculus].	671	0.0	O
Lyn	tyrosine-protein kinase Lyn isoform B [Mus musculus].	386	e-107	O
Lyn	tyrosine-protein kinase Lyn isoform A [Mus musculus].	386	e-107	O
Hck	tyrosine-protein kinase HCK isoform p56Hck [Mus musculus].	378	e-105	O
Hck	tyrosine-protein kinase HCK isoform p59Hck [Mus musculus].	378	e-105	O
Gm11787	PREDICTED: tyrosine-protein kinase Lyn-like [Mus musculus].	375	e-104	O
Blk	tyrosine-protein kinase Blk [Mus musculus].	367	e-102	O
Fyn	tyrosine-protein kinase Fyn isoform a [Mus musculus].	321	8e-88	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC478151 PREDICTED: similar to Proto-oncogene tyrosine-protein kinase LCK (P56-LCK) (LSK) (T cell-specific protein-tyrosine kinase) isoform 2 [Canis familiaris]. 694 0.0 O

LOC478151 PREDICTED: similar to Proto-oncogene tyrosine-protein kinase LCK (P56-LCK) (LSK) (T cell-specific protein-tyrosine kinase) isoform 1 [Canis familiaris]. 548 e-156 O

LOC477886 PREDICTED: similar to Yamaguchi sarcoma viral (v-yes-1) oncogene homolog isoform 1 [Canis familiaris]. 387 e-108 O

LOC477886 PREDICTED: similar to Yamaguchi sarcoma viral (v-yes-1) oncogene homolog isoform 2 [Canis familiaris]. 387 e-108 O

LOC485828 PREDICTED: similar to Tyrosine-protein kinase HCK (p59-HCK/p60-HCK) (Hemopoietic cell kinase) [Canis familiaris]. 386 e-107

LOC486080 PREDICTED: similar to Tyrosine-protein kinase BLK (B lymphocyte kinase) (p55-BLK) [Canis familiaris]. 370 e-102 O

LOC475032 PREDICTED: similar to fyn proto-oncogene isoform 6 [Canis familiaris]. 321 9e-88 O

LOC475032 PREDICTED: similar to fyn proto-oncogene isoform 2 [Canis familiaris]. 321 9e-88 O

LOC475032 PREDICTED: similar to fyn proto-oncogene isoform 7 [Canis familiaris]. 318 6e-87 O

LOC490532 PREDICTED: similar to Proto-oncogene tyrosine-protein kinase YES (p61-YES) (C-YES) [Canis familiaris]. 313 1e-85 O

Locus	Definition	Score	E value	FL
LOC478151	PREDICTED: similar to Proto-oncogene tyrosine-protein kinase LCK (P56-LCK) (LSK) (T cell-specific protein-tyrosine kinase) isoform 2 [Canis familiaris].	694	0.0	O
LOC478151	PREDICTED: similar to Proto-oncogene tyrosine-protein kinase LCK (P56-LCK) (LSK) (T cell-specific protein-tyrosine kinase) isoform 1 [Canis familiaris].	548	e-156	O
LOC477886	PREDICTED: similar to Yamaguchi sarcoma viral (v-yes-1) oncogene homolog isoform 1 [Canis familiaris].	387	e-108	O
LOC477886	PREDICTED: similar to Yamaguchi sarcoma viral (v-yes-1) oncogene homolog isoform 2 [Canis familiaris].	387	e-108	O
LOC485828	PREDICTED: similar to Tyrosine-protein kinase HCK (p59-HCK/p60-HCK) (Hemopoietic cell kinase) [Canis familiaris].	386	e-107
LOC486080	PREDICTED: similar to Tyrosine-protein kinase BLK (B lymphocyte kinase) (p55-BLK) [Canis familiaris].	370	e-102	O
LOC475032	PREDICTED: similar to fyn proto-oncogene isoform 6 [Canis familiaris].	321	9e-88	O
LOC475032	PREDICTED: similar to fyn proto-oncogene isoform 2 [Canis familiaris].	321	9e-88	O
LOC475032	PREDICTED: similar to fyn proto-oncogene isoform 7 [Canis familiaris].	318	6e-87	O
LOC490532	PREDICTED: similar to Proto-oncogene tyrosine-protein kinase YES (p61-YES) (C-YES) [Canis familiaris].	313	1e-85	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
LCK lymphocyte-specific protein tyrosine kinase [Bos taurus]. 688 0.0 O

LYN tyrosine-protein kinase Lyn [Bos taurus]. 388 e-108 O

HCK hemopoietic cell kinase isoform 1 [Bos taurus]. 385 e-107 O

BLK tyrosine-protein kinase Blk [Bos taurus]. 372 e-103 O

HCK hemopoietic cell kinase isoform 2 [Bos taurus]. 333 2e-91 O

FYN tyrosine-protein kinase Fyn [Bos taurus]. 321 9e-88 O

YES1 tyrosine-protein kinase Yes [Bos taurus]. 313 1e-85 O

FGR tyrosine-protein kinase Fgr [Bos taurus]. 311 7e-85 O

SRC v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Bos taurus]. 305 5e-83 O

FRK PREDICTED: tyrosine-protein kinase FRK-like [Bos taurus]. 267 1e-71 O

Locus	Definition	Score	E value	FL
LCK	lymphocyte-specific protein tyrosine kinase [Bos taurus].	688	0.0	O
LYN	tyrosine-protein kinase Lyn [Bos taurus].	388	e-108	O
HCK	hemopoietic cell kinase isoform 1 [Bos taurus].	385	e-107	O
BLK	tyrosine-protein kinase Blk [Bos taurus].	372	e-103	O
HCK	hemopoietic cell kinase isoform 2 [Bos taurus].	333	2e-91	O
FYN	tyrosine-protein kinase Fyn [Bos taurus].	321	9e-88	O
YES1	tyrosine-protein kinase Yes [Bos taurus].	313	1e-85	O
FGR	tyrosine-protein kinase Fgr [Bos taurus].	311	7e-85	O
SRC	v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Bos taurus].	305	5e-83	O
FRK	PREDICTED: tyrosine-protein kinase FRK-like [Bos taurus].	267	1e-71	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LCK tyrosine-protein kinase Lck [Sus scrofa]. 700 0.0 O

LOC100622004 PREDICTED: tyrosine-protein kinase Lck-like [Sus scrofa]. 699 0.0 O

LOC100526085 PREDICTED: tyrosine-protein kinase HCK-like [Sus scrofa]. 380 e-106 O

LOC100623761 PREDICTED: tyrosine-protein kinase Blk-like [Sus scrofa]. 374 e-104 O

LOC100627269 PREDICTED: tyrosine-protein kinase Blk-like [Sus scrofa]. 374 e-104 O

FYN tyrosine-protein kinase Fyn [Sus scrofa]. 321 5e-88 O

SRC PREDICTED: proto-oncogene tyrosine-protein kinase Src [Sus scrofa]. 305 4e-83 O

LOC100152890 PREDICTED: tyrosine-protein kinase Lyn-like [Sus scrofa]. 288 4e-78 O

FRK PREDICTED: tyrosine-protein kinase FRK [Sus scrofa]. 268 5e-72 O

LOC100513738 PREDICTED: tyrosine-protein kinase transforming protein Fgr-like [Sus scrofa]. 258 3e-69 O

Locus	Definition	Score	E value	FL
LCK	tyrosine-protein kinase Lck [Sus scrofa].	700	0.0	O
LOC100622004	PREDICTED: tyrosine-protein kinase Lck-like [Sus scrofa].	699	0.0	O
LOC100526085	PREDICTED: tyrosine-protein kinase HCK-like [Sus scrofa].	380	e-106	O
LOC100623761	PREDICTED: tyrosine-protein kinase Blk-like [Sus scrofa].	374	e-104	O
LOC100627269	PREDICTED: tyrosine-protein kinase Blk-like [Sus scrofa].	374	e-104	O
FYN	tyrosine-protein kinase Fyn [Sus scrofa].	321	5e-88	O
SRC	PREDICTED: proto-oncogene tyrosine-protein kinase Src [Sus scrofa].	305	4e-83	O
LOC100152890	PREDICTED: tyrosine-protein kinase Lyn-like [Sus scrofa].	288	4e-78	O
FRK	PREDICTED: tyrosine-protein kinase FRK [Sus scrofa].	268	5e-72	O
LOC100513738	PREDICTED: tyrosine-protein kinase transforming protein Fgr-like [Sus scrofa].	258	3e-69	O

Assembly Members: 8 TOP

Library Plate Loc. Read Name Accession Full Seq.

KDN01 0039 F02 KDN01_0039_F02.b
MLN01 0080 F04 MLN01_0080_F04.b CJ014026
PBL01 0037 F09 PBL01_0037_F09.b BP156127
SPL01 0012 D01 SPL01_0012_D01.b BP157670
THY01 0029 G07 THY01_0029_G07.b BP167478
THY01 0033 F03 THY01_0033_F03.b BP165815
THY01 0066 H05 THY01_0066_H05.b BP168579
THY01 0091 H06 THY01_0091_H06.b BP168704

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
533 A 6 0 0.750 W S CCA/P
G 2 0 0.250 CCG/P

Alignment: TOP

20110601C-008120 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
THY01_0033_F03.b : tttgggtgcacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0012_D01.b :  cattaaggtggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0037_F09.b :                                   nnaatgaacaxxxxxxxxxxxxxxxx
MLN01_0080_F04.b :           nnnngctaggacttgacagtttgtacxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0066_H05.b :   gctxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0039_F02.b :                                                             
THY01_0029_G07.b :                              tttatggtgxxxxxxxxxxxxxxxxxxxxxx
THY01_0091_H06.b :                                                             


20110601C-008120 : ........................GCTACAACGCCGAGGGGAGCTGAAGCTGCGTCTGGG
                   ---------+---------+---------+---------+---------+---------+ 36
THY01_0033_F03.b : xxxxxxxxxxxxxxxxxxxxxxxxGCTACAACGCCGAGGGGAGCTGAAGCTGCGTCTGGG
SPL01_0012_D01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxCAACGCCGAGGGGAGCTGAAGCTGCGTCTGGG
PBL01_0037_F09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxCAACGCCGAGGGGAGCTGAAGCTGCGTCTGGG
MLN01_0080_F04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxCAACGCCGAGGGGAGCTGAAGCTGCGTCTGGG
THY01_0066_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxCAACGCCGAGGGGAGCTGAAGCTGCGTCTGGG
KDN01_0039_F02.b :              nttcctacgttggctctggacgcgaggggagctgAGCTGCGTCTGGG
THY01_0029_G07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgagctagg
THY01_0091_H06.b :                                                     ccccccga


20110601C-008120 : CAGCCAGGCTAGGCCAGGAAGACCATGTGAATGGGGCCAGAGGGCTCCTGGGCTGGGCAG
                   ---------+---------+---------+---------+---------+---------+ 96
THY01_0033_F03.b : CAGCCAGGCTAGGCCAGGAAGACCATGTGAATGGGGCCAGAGGGCTCCTGGGCTGGGCAG
SPL01_0012_D01.b : CAGCCAGGCTAGGCCAGGAAGACCATGTGAATGGGGCCAGAGGGCTCCTGGGCTGGGCAG
PBL01_0037_F09.b : CAGCCAGGCTAGGCCAGGAAGACCATGTGAATGGGGCCAGAGGGCTCCTGGGCTGGGCAG
MLN01_0080_F04.b : CAGCCAGGCTAGGCCAGGAAGACCATGTGAATGGGGCCAGAGGGCTCCTGGGCTGGGCAG
THY01_0066_H05.b : CAGCCAGGCTAGGCCAGGAAGACCATGTGAATGGGGCCAGAGGGCTCCTGGGCTGGGCAG
KDN01_0039_F02.b : CA*CCAGGCTAGGCCAGGAAC*CCTAGTGAATGGGGCCAGAGGGCTCCTGGGCTGGGCAG
THY01_0029_G07.b : accccacttcagctcttttctgtggctgctgaatgggtgctggggggctgacaatctCAG
THY01_0091_H06.b : gcattagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-008120 : GGACCATGGGCTGTAGCTGCAGCTCAAACCCTGAAGATGACTGGATGGAAAACATCGACG
                   ---------+---------+---------+---------+---------+---------+ 156
THY01_0033_F03.b : GGACCATGGGCTGTAGCTGCAGCTCAAACCCTGAAGATGACTGGATGGAAAACATCGACG
SPL01_0012_D01.b : GGACCATGGGCTGTAGCTGCAGCTCAAACCCTGAAGATGACTGGATGGAAAACATCGACG
PBL01_0037_F09.b : GGACCATGGGCTGTAGCTGCAGCTCAAACCCTGAAGATGACTGGATGGAAAACATCGACG
MLN01_0080_F04.b : GGACCATGGGCTGTAGCTGCAGCTCAAACCCTGAAGATGACTGGATGGAAAACATCGACA
THY01_0066_H05.b : GGACCATGGGCTGTAGCTGCAGCTCAAACCCTGAAGATGACTGGATGGAAAACATCGACG
KDN01_0039_F02.b : GCTCTATGGGCTGTAGCTGCAGCTCAAACCCTGAAGATGACTGGATGGAAAACATCGACG
THY01_0029_G07.b : GGACCATGGGCTGTAGCTGCAGCTCAAACCCTGAAGATGACTGGATGGAAAACATCGACG
THY01_0091_H06.b : xxxxxxxxxxxxxxxxxxxxAGCTCAAACCCTGAAGATGACTGGATGGAAAACATCGACG


20110601C-008120 : TATGTGAGAACTGCCATTACCCCATAGTCCCACTGGATGGCAAGGCCACGCTGCCCATGC
                   ---------+---------+---------+---------+---------+---------+ 216
THY01_0033_F03.b : TATGTGAGAACTGCCATTACCCCATAGTCCCACTGGATGGCAAGGCCACGCTGCCCATGC
SPL01_0012_D01.b : TATGTGAGAACTGCCATTACCCCATAGTCCCACTGGATGGCAAGGCCACGCTGCCCATGC
PBL01_0037_F09.b : TATGTGAGAGCTGCCATTACCCCATAGTCCCACTGGATGGCAAGGCCACGCTGCCCATGC
MLN01_0080_F04.b : TATGTGAGAACTGCCATTACCCCATAGTCCCACTGGATGGCAAGGCCACGCTGCCCATGC
THY01_0066_H05.b : TATGTGAGAACTGCCACTACCCCATAGTCCCACTGGATGGCAAGGCCACGCTGCCCATGC
KDN01_0039_F02.b : TATGTGAGAACTGCCATTACCCCATAGTCCCACTGGATGGCAAGGCCACGCTGCCCATGC
THY01_0029_G07.b : TATGTGAGAACTGCCATTACCCCATAGTCCCACTGGATGGCAAGGCCACGCTGCCCATGC
THY01_0091_H06.b : TATGTGAGAACTGCCATTACCCCATAGTCCCACTGGATGGCAAGGCCACGCTGCCCATGC


20110601C-008120 : GGAATGGCTCTGAAGTTCGGGATCCACTGGTCACCTATGAGGGCTCCAACCCCCCAGCCT
                   ---------+---------+---------+---------+---------+---------+ 276
THY01_0033_F03.b : GGAATGGCTCTGAAGTTCGGGATCCACTGGTCACCTATGAGGGCTCCAACCCCCCAGCCT
SPL01_0012_D01.b : GGAATGGCTCTGAAGTTCGGGATCCACTGGTCACCTATGAGGGCTCCAACCCCCCAGCCT
PBL01_0037_F09.b : GGAATGGCTCTGAAGTTCGGGATCCACTGGTCACCTATGAGGGCTCCAACCCCCCAGCCT
MLN01_0080_F04.b : GGAATGGCTCTGAAGTTCGGGATCCACTGGTCACCTATGAGGGCTCCAACCCCCCAGCCT
THY01_0066_H05.b : GGAATGGCTCTGAAGTTCGGGATCCACTGGTCACCTATGAGGGCTCCAACCCCCCAGCCT
KDN01_0039_F02.b : GGAATGGCTCTGAAGTTCGGGATCCACTGGTCACCTATGAGGGCTCCAACCCCCCAGCCT
THY01_0029_G07.b : GGAATGGCTCTGAAGTTCGGGATCCACTGGTCACCTATGAGGGCTCCAACCCCCCAGCCT
THY01_0091_H06.b : GGAATGGCTCTGAAGTTCGGGATCCACTGGTCACCTATGAGGGCTCCAACCCCCCAGCCT


20110601C-008120 : CTCCACTGCAAGACAACCTGGTGATCGCCCTGCACAGCTATGAGCCTTCTCACGATGGAG
                   ---------+---------+---------+---------+---------+---------+ 336
THY01_0033_F03.b : CTCCACTGCAAGACAACCTGGTGATCGCCCTGCACAGCTATGAGCCTTCTCACGATGGAG
SPL01_0012_D01.b : CTCCACTGCAAGACAACCTGGTGATCGCCCTGCACAGCTATGAGCCTTCTCGCGATGGAG
PBL01_0037_F09.b : CTCCACTGCAAGACAACCTGGTGATCGCCCTGCACAGCTATGAGCCTTCTCACGATGGAG
MLN01_0080_F04.b : CTCCACTGCAAGACAACCTGGTGATCGCCCTGCACAGCTATGAGCCTTCTCACGATGGAG
THY01_0066_H05.b : CTCCACTGCAAGACAACCTGGTGATCGCCCTGCACAGCTATGAGCCTTCTCACGATGGAG
KDN01_0039_F02.b : CTCCACTGCAAGACAACCTGGTGATCGCCCTGCACAGCTATGAGCCTTCTCACGATGGAG
THY01_0029_G07.b : CTCCACTGCAAGACAACCTGGTGATCGCCCTGCACAGCTATGAGCCTTCTCACGATGGAG
THY01_0091_H06.b : CTCCACTGCAAGACAACCTGGTGATCGCCCTGCACAGCTATGAGCCTTCTCACGATGGAG


20110601C-008120 : ACCTGGGCTTCGAGAAGGGTGAACAGCTACGTATATTAGAGCAGAACGGCGAGTGGTGGA
                   ---------+---------+---------+---------+---------+---------+ 396
THY01_0033_F03.b : ACCTGGGCTTCGAGAAGGGTGAACAGCTACGTATATTAGAGCAGAACGGCGAGTGGTGGA
SPL01_0012_D01.b : ACCTGGGCTTCGAGAAGGGTGAACAGCTACGTATATTAGAGCAGAACGGCGGGTGGTGGA
PBL01_0037_F09.b : ACCTGGGCTTCGAGAAGGGTGAACAGCTACGTATATTAGAGCAGAACGGCGAGTGGTGGA
MLN01_0080_F04.b : ACCTGGGCTTCGAGAAGGGTGAACAGCTACGTATATTAGAGCAGAACGGCGAGTGGTGGA
THY01_0066_H05.b : ACCTGGGCTTCGAGAAGGGTGAACAGCTACGTATATTAGAGCAGAACGGCGAGTGGTGGA
KDN01_0039_F02.b : ACCTGGGCTTCGAGAAGGGTGAACAGCTACGTATATTAGAGCAGAACGGCGAGTGGTGGA
THY01_0029_G07.b : ACCTGGGCTTCGAGAAGGGTGAACAGCTACGTATATTAGAGCAGAACGGCGAGTGGTGGA
THY01_0091_H06.b : ACCTGGGCTTCGAGAAGGGTGAACAGCTACGTATATTAGAGCAGAACGGCGAGTGGTGGA


20110601C-008120 : AAGCACAGTCCCTGACCACGGGCCTGGAAGGTTTCATCCCTTTCAACTTCGTGGCCAAAG
                   ---------+---------+---------+---------+---------+---------+ 456
THY01_0033_F03.b : AAGCACAGTCCCTGACCACGGGCCTGGAAGGTTTCATCCCTTTCAACTTCGTGGCCAAAG
SPL01_0012_D01.b : AAGCACAGTCCCTGACCACGGGCCTGGAAGGTTTCATCCCTTTCAACTTCGTGGCCAAAG
PBL01_0037_F09.b : AAGCACAGTCCCTGACCACGGGCCTGGAAGGTTTCATCCCTTTCAACTTCGTGGCCAAAG
MLN01_0080_F04.b : AAGCACAGTCCCTGACCACGGGCCTGGAAGGTTTCATCCCTTTCAACTTCGTGGCCAAAG
THY01_0066_H05.b : AAGCACAGTCCCTGACCACGGGCCTGGAAGGTTTCATCCCTTTCAACTTCGTGGCCAAAG
KDN01_0039_F02.b : AAGCACAGTCCCTGACCACGGGCCTGGAAGGTTTCATCCCTTTCAACTTCGTGGCCAAAG
THY01_0029_G07.b : AAGCACAGTCCCTGACCACGGGCCTGGAAGGTTTCATCCCTTTCAACTTCGTGGCCAAAG
THY01_0091_H06.b : AAGCACAGTCCCTGACCACGGGCCTGGAAGGTTTCATCCCTTTCAACTTCGTGGCCAAAG


20110601C-008120 : CAAACAGCCTTGAGCCGGAACCCTGGTTCTTCAAGAATCTGAGCCGCAAGGATGCGGAGA
                   ---------+---------+---------+---------+---------+---------+ 516
THY01_0033_F03.b : CAAACAGCCTTGAGCCGGAACCCTGGTTCTTCAAGAATCTGAGCCGCAAGGATGCGGAGA
SPL01_0012_D01.b : CAAACAGCCTTGAGCCGGAACCCTGGTTCTTCAAGAATCTGAGCCGCAAGGATGCGGAGA
PBL01_0037_F09.b : CAAACAGCCTTGAGCCGGAACCCTGGTTCTTCAAGAATCTGAGCCGCAAGGATGCGGAGA
MLN01_0080_F04.b : CAAACAGCCTTGAGCCGGAACCCTGGTTCTTCAAGAATCTGAGCCGCAAGGATGCGGAGA
THY01_0066_H05.b : CAAACAGCCTTGAGCCGGAACCCTGGTTCTTCAAGAATCTGAGCCGCAAGGATGCGGAGA
KDN01_0039_F02.b : CAAACAGCCTTGAGCCGGAACCCTGGTTCTTCAAGAATCTGAGCCGCAAGGATGCGGAGA
THY01_0029_G07.b : CAAACAGCCTTGAGCCGGAACCCTGGTTCTTCAAGAATCTGAGCCGCAAGGATGCGGAGA
THY01_0091_H06.b : CAAACAGCCTTGAGCCGGAACCCTGGTTCTTCAAGAATCTGAGCCGCAAGGATGCGGAGA


20110601C-008120 : GGCAGCTTTTGGCGCCAGGGAACACGCACGGCTCCTTCCTGATCCGGGAGAGCGAGAGCA
                   ---------+---------+---------+---------+---------+---------+ 576
THY01_0033_F03.b : GGCAGCTTTTGGCGCCAGGGAACACGCACGGCTCCTTCCTGATCCGGGAGAGCGAGAGCA
SPL01_0012_D01.b : GGCAGCTTTTGGCGCCAGGGAACACGCACGGCTCCTTCCTGATCCGGGAGAGCGAGAGCA
PBL01_0037_F09.b : GGCAGCTTTTGGCGCCGGGGAACACGCACGGCTCCTTCCTGATCCGGGAGAGCGAGAGCA
MLN01_0080_F04.b : GGCAGCTTTTGGCGCCAGGGAACACGCACGGCTCCTTCCTGATCCGGGAGAGCGAGAGCA
THY01_0066_H05.b : GGCAGCTTTTGGCGCCAGGGAACACGCACGGCTCCTTCCTGATCCGGGAGAGCGAGAGCA
KDN01_0039_F02.b : GGCAGCTTTTGGCGCCAGGGAACACGCACGGCTCCTTCCTGATCCGGGAGAGCGAGAGCA
THY01_0029_G07.b : GGCAGCTTTTGGCGCCAGGGAACACGCACGGCTCCTTCCTGATCCGGGAGAGCGAGAGCA
THY01_0091_H06.b : GGCAGCTTTTGGCGCCGGGGAACACGCACGGCTCCTTCCTGATCCGGGAGAGCGAGAGCA


20110601C-008120 : CAGCGGGATCCTTTTCATTGTCCGTCCGGGACTTCGACCAGAACCAAGGAGAAGTGGTGA
                   ---------+---------+---------+---------+---------+---------+ 636
THY01_0033_F03.b : CAGCGGGATCCTTTTCATTGTCCGTCCGGGACTTCGACCAGAACCAAGGAGAAGTGGTGA
SPL01_0012_D01.b : CAGCGGGATCCTTTTCATTGTCCGTCCGGGACTTCGACCAGAACCAAGGAGAAGTGGTGA
PBL01_0037_F09.b : CAGCGGGATCCTTTTCATTGTCCGTCCGGGACTTCGACCAGAATCAAGGAGAAGTGGGTG
MLN01_0080_F04.b : CAGCGGGATCCTTTTCATTGTCCGTCCGGGACTTCGACCAGAACCAAGGAGAAGTGGTGA
THY01_0066_H05.b : CAGCGGGATCCTTTTCATTGTCCGTCCGGGACTTCGACCAGAACCAAGGAGAAGTGGTGA
KDN01_0039_F02.b : CAGCGGGATCCTTTTCATTGTCCGTCCGGGACTTCGACCAGAACCAAGGAGAAGTGGTGA
THY01_0029_G07.b : CAGCGGGATCCTTTTCATTGTCCGTCCGGGACTTCGACCAGAACCAAGGAGAAGTGGTGA
THY01_0091_H06.b : CAGCGGGATCCTTTTCATTGTCCGTCCGGGACTTCGACCAGAACCAAGGAGAAGTGGTGA


20110601C-008120 : AACATTACAAGATCCGTAACCTGGACAAAGGCGGCTTCTACATCTCTCCCCGCATCACTT
                   ---------+---------+---------+---------+---------+---------+ 696
THY01_0033_F03.b : AACATTACAAGATCCGTAACCTGGACAAAGGCGGCTTCTACATCTCTCCCCGCATCACTT
SPL01_0012_D01.b : AACATTACAAGATCCGTAACCTGGACAAAGGCGGCTTCTACATCTCTCCCCGCATCACTT
PBL01_0037_F09.b : AACATTACAAGATCCGTAACCTGNACAAANGCGGCTTCTACATCTCTCCCCGCATCACTT
MLN01_0080_F04.b : AACATTACAAGATCCGTAACCTGGACAAAGGCGGCTTCTACATCTCTCCCCGCATCACTT
THY01_0066_H05.b : AACATTACAAGATCCGTAACCTGGACAAAGGCGGCTTCTACATCTCTCCCCGCATCACTT
KDN01_0039_F02.b : AACATTACAAGATCCGTAACCTGGACAAAGGCGGCTTCTACATCTCTCCCCGCATCACTT
THY01_0029_G07.b : AACATTACAAGATCCGTAACCTGGACAAAGGCGGCTTCTACATCTCTCCCCGCATCACTT
THY01_0091_H06.b : AACATTACAAGATCCGTAACCTGGACAAAGGCGGCTTCTACATCTCTCCCCGCATCACTT


20110601C-008120 : TTCCTGGCTTGCACGAACTGGTCCATCATTACACGAATTCTTCGGACGGGTTGTGCACGC
                   ---------+---------+---------+---------+---------+---------+ 756
THY01_0033_F03.b : TTCCTGGCTTGCACGAACTGGTCCATCATTACACGAATTCTTCGGACGGGTTGTGCACGC
SPL01_0012_D01.b : TTCCTGGCTTGCACGAACTGGTCCATCATTACACGAATTCTTCGGACGGGTTGTGCACGC
PBL01_0037_F09.b : TTTCTGGCTTGCACGAACTGGTCCATCATTACACGAATTCCTCNGACGGGNTGTGCACGC
MLN01_0080_F04.b : TTCCTGGCTTGCACGAACTGGTCCATCATTACACGAATTCTTCGGACGGGTTGTGCACGC
THY01_0066_H05.b : TTCCTGGCTTGCACGAACTGGTCCATCATTACACGAATTCTTCGGACGGGTTGTGCACGC
KDN01_0039_F02.b : TTCCTGGCTTGCACGAACTGGTCCATCATTACACGAATTCTTCGGACGGGTTGTGCACGC
THY01_0029_G07.b : TTCCTGGCTTGCACGAACTGGTCCATCATTACACGAATTCTTCGGACGGGTTGTGCACGC
THY01_0091_H06.b : TTCCTGGCTTGCACGAACTGGTCCATCATTACACGAATTCTTCGGACGGGTTGTGCACGC


20110601C-008120 : GAT*TGAACCGGCCCTGCCAGACCCAGAAGCCCCAGAAGCCTTGGTGGGAGGACGAGTGG
                   ---------+---------+---------+---------+---------+---------+ 815
THY01_0033_F03.b : GAT*TGAACCGGCCCTGCCAGACCCAGAAGCCCCAGAAGCCTTGGTGGGAGGACGAGTGG
SPL01_0012_D01.b : GAT*TGAACCGGCCCTGCCAGACCCAGAAGCCCCAGAAGCCTTGGTGGGAGGACGAGTGG
PBL01_0037_F09.b : GATTTGAACCGGCCCTGCCAGACCCAAANCCCCCAAAAGCCTTGGTGGNNAGACGAGTGG
MLN01_0080_F04.b : GAT*TGAACCGGCCCTGCCAGACCCAGAAGCCCCAGAAGCCTTGGTGGGAGGACGAGTGG
THY01_0066_H05.b : GAT*TGAACCGGCCCTGCCAGACCCAGAAGCCCCAGAAGCCTTGGTGGGAGGACGAGTGG
KDN01_0039_F02.b : GAT*TGAACCGGCCCTGCCAGACCCAGAAGCCCCAGAAGCCTTGGTGGGAGGACGAGTGG
THY01_0029_G07.b : GAT*TGAACCGGCCCTGCCAGACCCAGAAGCCCCAGAAGCCTTGGTGGGAGGACGGGTGG
THY01_0091_H06.b : GAT*TGAACCGGCCCTGCCAGACCCAGAAGCCCCAGAAGCCTTGGTGGGAGGACGAGTGG


20110601C-008120 : GAAGTTCCCAGGGAGACGCTGAAGCTGGTGGAGCGGCTGGGGGCTGGCCAGTTCGGGGAG
                   ---------+---------+---------+---------+---------+---------+ 875
THY01_0033_F03.b : GAAGTTCCCAGGGAGACGCTGAAGCTGGTGGAGCGGCTGGGGGCTGGCCAGTTCGGGGAG
SPL01_0012_D01.b : GAAGTTCCCAGGGAGACGCTG                                      
PBL01_0037_F09.b : GAAAGTCCCAGGGAGACGCTGAANNCTGTGGAGCGGCTGGGGGCTGGCCA*TTCGGGGAA
MLN01_0080_F04.b : GAAGTTCCCAGGGAGACGCTGAAGCTGGTGGAGCGGCTGGGGGCTGGCCAGTTCGGGGAG
THY01_0066_H05.b : GAAGTTCCCAGGGAGACGCTGAAGCTGGTGGAGCGGCTGGNGGCTGGCCAGTTCGGGGAG
KDN01_0039_F02.b : GAAGTTCCCAGGGAGACGCTGAAACTGGTGGAGCGGCTGGGGGCTGGCCAGTTCGGGGAG
THY01_0029_G07.b : GAAGTTCCCAGGGAGACGCTGAAGCTGGTGGAGCGGCTGGGGGCTGGCCAGTTCGGGGAG
THY01_0091_H06.b : GAAGTTCCCAGGGAGACGCTGAAGCTGGTGGAGCGGCTGGGGGCTGGCCAGTTCGGGGAG


20110601C-008120 : GTGTGGATGGGG*TACTACAACGGGCACACGAAGGTGGCAGTAAAGAGCCTGAAGCAGGG
                   ---------+---------+---------+---------+---------+---------+ 934
THY01_0033_F03.b : GGGTGGATGGGGGTACTACAACGGGCACACGAAAGTGGCAGTAAAGAAGCTGAAACCAGG
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b : GTGTGGATGGGG*TACTACAACGGCCACACCAANGTGGCAATAAAaagctgaaacagggc
MLN01_0080_F04.b : GTGTGGATGGGGTNACTACA*CGGGCACACGAAAGTTGCAGTAAAGAAGCTGAAGCAGGG
THY01_0066_H05.b : GTGTGGATGGGG*TACTACAACGGGCACACGAAGGTGGCAGTAAAGAAGCTGAAGCAGGG
KDN01_0039_F02.b : GTGTGGATGGGG*TACTACAACGGGCACACGAAGGTGGCAGTAAGGAGCCTGAAGCAAGC
THY01_0029_G07.b : GTGTGGATGGGG*TACTACAACGGGCACACGAAGGTGGCAGTAAAGAAGCTGAAGCAGGG
THY01_0091_H06.b : GTGTGGATGGGG*TACTACAACGGGCACACGAAGGTGGCAGTAAAGAGCCTGAAGCAGGG


20110601C-008120 : CAGCATGTCCCCCGATGCCTTCCTGGCCGAGGCCAACCTCATGAAGCAGCTGCAACACCA
                   ---------+---------+---------+---------+---------+---------+ 994
THY01_0033_F03.b : CAGCATGTCCCCCcaatgccttcctggcccaaggccaccctcatgaagcagctgcaacac
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b : ancatgtccccgaatgcttcctggncgaggcccctcatgaaacactgcaaaccagcgact
MLN01_0080_F04.b : CANCATGTCCCCCGATGCCTTCCTGGNCGAagncaactcatgaagcagctgcacaccagc
THY01_0066_H05.b : CAGCATGTCCCCCGATGCCTTCCTGGGCGAAGGCAACCTCATGAAGCAGCTGCAACACCA
KDN01_0039_F02.b : CAGCATGTCCCCCGATGCCTTCCTGGCCGAAGCCAACCTCATGAAGCAGCTGTCACAACA
THY01_0029_G07.b : CAGCATGTCCCCCGATGCCTTCCTGGCCGAAGGCAACCTCATGAAGCAacctgcaacacc
THY01_0091_H06.b : CAGCATGTCCCCCGATGGCTTCCTGGCCGAGGCCCACCTCATGAAGCACCCGCAACACCC


20110601C-008120 : GCGACTGGTCCGGCTCTATGCGGTGGTCACCCAGGAACCCATCTACATCATCACCGGATA
                   ---------+---------+---------+---------+---------+---------+ 1054
THY01_0033_F03.b : ccaccaactgggcccggcttttatggcggtgggcccccccagaagccccatttaactcca
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b : ggtccggtctatgcgtggtccccagaacccttttactcttccggatcctggaaagggagc
MLN01_0080_F04.b : gactggtccgctcnatggcgtggtcacccagacccatctgctcatccggaatcctggaaa
THY01_0066_H05.b : GCGACTGGgtccggctcttatgcggtggtcc                            
KDN01_0039_F02.b : GCGACTGGTCCGGCTCTATGCGGTGGGCACCCAGGAACCCATCTTAATCTTCACCGAATA
THY01_0029_G07.b : cagcgactggtcccggctctttgcggggggtcaccccgagagccccttctaccttcattc
THY01_0091_H06.b : GCGACTGGTCCGGCTCTATGCGGTGGTCAC*CAGGAGCCCATCTACATCATCACCGGATA


20110601C-008120 : CATGGAGAATGGGAACCTGGTGGAATTTCTCCAAAACTCCCCAGGCATTCAGCTGACCAT
                   ---------+---------+---------+---------+---------+---------+ 1114
THY01_0033_F03.b : tcccgggaaaaacttggaaaaaagggggaaccctgggggggaattttccctccaaaaacc
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b : tggggaattcctagactctcaggctaaatgacctcacaactctgactgccaccaatgcaa
MLN01_0080_F04.b : atggacctggtggattctcagactcccagggtcagctgaccttaacactcttgaatggca
THY01_0066_H05.b :                                                             
KDN01_0039_F02.b : CATGGAGAATGGGAACCTGGTGGAATTTCTCCAAAACTCCCCAGGCATTCAGCTGACCAT
THY01_0029_G07.b : ccggaaatcaatggaaaaaatgggaagccctggggggattttccctcaaaaaccccccac
THY01_0091_H06.b : CATGGAGGATGGGgaccctggtggatttcctccagacctgcacagggcatcaaactggac


20110601C-008120 : TCACAAATTCTTGGAAGGGGCAGCCCAAATTGCA..........................
                   ---------+---------+---------+---------+---------+---------+ 1148
THY01_0033_F03.b : cccccccagggggatttcaaagatctgaaccccaaccaaaaacaaaaacccttttttggg
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b : ggctgcttcttgaatcgatcctcccggactggggcgcaaatcgggtcgaaccgaatcaaa
MLN01_0080_F04.b : cccaattgcaaggcgggcatcctgaaatcgaattcatcccggacttggggcgcaatccgg
THY01_0066_H05.b :                                                             
KDN01_0039_F02.b : TCACAAATTCTTGGAAGGGGCAGCCCAAATTGCAaaggcaggccttccttggaaaacgga
THY01_0029_G07.b : cggggcattcaaagcttttacccattccaaacaaaaaccctttttggggaacattgggga
THY01_0091_H06.b : catcaccaaactcttggaactggcacccccaatttgcagaagggcatgggctttctttga


20110601C-008120 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1148
THY01_0033_F03.b : gaaaaaaaggtgggggagaaccccccccccaaaaaat                      
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b : tccaatggctccgcccttgaaacgtcaccccggggggcatcctttggaaccaaactcttg
MLN01_0080_F04.b : ggtgaaccgggacga                                            
THY01_0066_H05.b :                                                             
KDN01_0039_F02.b : atttcctccccgggacttagggcctgcaaaatcctggggctgaacacctgactggcaaat
THY01_0029_G07.b : aacccccccaaaaatttttcccaaaaaaagggggcactttgtgggccaattttttctctt
THY01_0091_H06.b : aaaatcgga                                                  


20110601C-008120 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1148
THY01_0033_F03.b :                                                             
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b : gaattcccattagggtttgatccaaaatcccgccccccccaaaaaggttaaaagggcctg
MLN01_0080_F04.b :                                                             
THY01_0066_H05.b :                                                             
KDN01_0039_F02.b : gtacatttggcctaccgccttcttggaacacagaaccacccggggagggccatttctctt
THY01_0029_G07.b : ttttgtgtaaaagagaaaaatttccg                                 
THY01_0091_H06.b :                                                             


20110601C-008120 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1148
THY01_0033_F03.b :                                                             
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b : tccttcccaattcttttttggcggaatttaccggatttcggacccccgcggggcc    
MLN01_0080_F04.b :                                                             
THY01_0066_H05.b :                                                             
KDN01_0039_F02.b : ttgggacgcccaaaacccactcggggattccaccaatggatggggtccttggaactgaaa
THY01_0029_G07.b :                                                             
THY01_0091_H06.b :                                                             


20110601C-008120 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1148
THY01_0033_F03.b :                                                             
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b :                                                             
MLN01_0080_F04.b :                                                             
THY01_0066_H05.b :                                                             
KDN01_0039_F02.b : aaaattctcccgccccctcccccaagagcaatgggtttacaaccggggctctcgtgtcac
THY01_0029_G07.b :                                                             
THY01_0091_H06.b :                                                             


20110601C-008120 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1148
THY01_0033_F03.b :                                                             
SPL01_0012_D01.b :                                                             
PBL01_0037_F09.b :                                                             
MLN01_0080_F04.b :                                                             
THY01_0066_H05.b :                                                             
KDN01_0039_F02.b : caactcccagattacctttg                                       
THY01_0029_G07.b :                                                             
THY01_0091_H06.b :