[Help]

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008120

Length: 1,148

Sequence:  [FASTA format sequence]
GCTACAACGC CGAGGGGAGC TGAAGCTGCG TCTGGGCAGC CAGGCTAGGC CAGGAAGACC
ATGTGAATGG GGCCAGAGGG CTCCTGGGCT GGGCAGGGAC CATGGGCTGT AGCTGCAGCT
CAAACCCTGA AGATGACTGG ATGGAAAACA TCGACGTATG TGAGAACTGC CATTACCCCA
TAGTCCCACT GGATGGCAAG GCCACGCTGC CCATGCGGAA TGGCTCTGAA GTTCGGGATC
CACTGGTCAC CTATGAGGGC TCCAACCCCC CAGCCTCTCC ACTGCAAGAC AACCTGGTGA
TCGCCCTGCA CAGCTATGAG CCTTCTCACG ATGGAGACCT GGGCTTCGAG AAGGGTGAAC
AGCTACGTAT ATTAGAGCAG AACGGCGAGT GGTGGAAAGC ACAGTCCCTG ACCACGGGCC
TGGAAGGTTT CATCCCTTTC AACTTCGTGG CCAAAGCAAA CAGCCTTGAG CCGGAACCCT
GGTTCTTCAA GAATCTGAGC CGCAAGGATG CGGAGAGGCA GCTTTTGGCG CCAGGGAACA
CGCACGGCTC CTTCCTGATC CGGGAGAGCG AGAGCACAGC GGGATCCTTT TCATTGTCCG
TCCGGGACTT CGACCAGAAC CAAGGAGAAG TGGTGAAACA TTACAAGATC CGTAACCTGG
ACAAAGGCGG CTTCTACATC TCTCCCCGCA TCACTTTTCC TGGCTTGCAC GAACTGGTCC
ATCATTACAC GAATTCTTCG GACGGGTTGT GCACGCGATT GAACCGGCCC TGCCAGACCC
AGAAGCCCCA GAAGCCTTGG TGGGAGGACG AGTGGGAAGT TCCCAGGGAG ACGCTGAAGC
TGGTGGAGCG GCTGGGGGCT GGCCAGTTCG GGGAGGTGTG GATGGGGTAC TACAACGGGC
ACACGAAGGT GGCAGTAAAG AGCCTGAAGC AGGGCAGCAT GTCCCCCGAT GCCTTCCTGG
CCGAGGCCAA CCTCATGAAG CAGCTGCAAC ACCAGCGACT GGTCCGGCTC TATGCGGTGG
TCACCCAGGA ACCCATCTAC ATCATCACCG GATACATGGA GAATGGGAAC CTGGTGGAAT
TTCTCCAAAA CTCCCCAGGC ATTCAGCTGA CCATTCACAA ATTCTTGGAA GGGGCAGCCC
AAATTGCA

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

---

Assembly Overview:      TOP

Change score limit to  

---

BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		LCK	tyrosine-protein kinase Lck precursor [Homo sapiens].	681	0.0	O
		LCK	tyrosine-protein kinase Lck precursor [Homo sapiens].	681	0.0	O
		LYN	tyrosine-protein kinase Lyn isoform A [Homo sapiens].	392	e-109	O
		LYN	tyrosine-protein kinase Lyn isoform B [Homo sapiens].	389	e-108	O
		HCK	tyrosine-protein kinase HCK isoform b [Homo sapiens].	387	e-108	O
		HCK	tyrosine-protein kinase HCK isoform b [Homo sapiens].	387	e-108	O
		HCK	tyrosine-protein kinase HCK isoform a [Homo sapiens].	387	e-108	O
		HCK	tyrosine-protein kinase HCK isoform e [Homo sapiens].	387	e-108	O
		HCK	tyrosine-protein kinase HCK isoform c [Homo sapiens].	386	e-107	O
		HCK	tyrosine-protein kinase HCK isoform d [Homo sapiens].	386	e-107	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Lck	proto-oncogene tyrosine-protein kinase LCK isoform a [Mus musculus].	673	0.0	O
		Lck	proto-oncogene tyrosine-protein kinase LCK isoform b [Mus musculus].	671	0.0	O
		Lck	proto-oncogene tyrosine-protein kinase LCK isoform b [Mus musculus].	671	0.0	O
		Lyn	tyrosine-protein kinase Lyn isoform B [Mus musculus].	386	e-107	O
		Lyn	tyrosine-protein kinase Lyn isoform A [Mus musculus].	386	e-107	O
		Hck	tyrosine-protein kinase HCK isoform p56Hck [Mus musculus].	378	e-105	O
		Hck	tyrosine-protein kinase HCK isoform p59Hck [Mus musculus].	378	e-105	O
		Gm11787	PREDICTED: tyrosine-protein kinase Lyn-like [Mus musculus].	375	e-104	O
		Blk	tyrosine-protein kinase Blk [Mus musculus].	367	e-102	O
		Fyn	tyrosine-protein kinase Fyn isoform a [Mus musculus].	321	8e-88	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC478151	PREDICTED: similar to Proto-oncogene tyrosine-protein kinase LCK (P56-LCK) (LSK) (T cell-specific protein-tyrosine kinase) isoform 2 [Canis familiaris].	694	0.0	O
		LOC478151	PREDICTED: similar to Proto-oncogene tyrosine-protein kinase LCK (P56-LCK) (LSK) (T cell-specific protein-tyrosine kinase) isoform 1 [Canis familiaris].	548	e-156	O
		LOC477886	PREDICTED: similar to Yamaguchi sarcoma viral (v-yes-1) oncogene homolog isoform 1 [Canis familiaris].	387	e-108	O
		LOC477886	PREDICTED: similar to Yamaguchi sarcoma viral (v-yes-1) oncogene homolog isoform 2 [Canis familiaris].	387	e-108	O
		LOC485828	PREDICTED: similar to Tyrosine-protein kinase HCK (p59-HCK/p60-HCK) (Hemopoietic cell kinase) [Canis familiaris].	386	e-107
		LOC486080	PREDICTED: similar to Tyrosine-protein kinase BLK (B lymphocyte kinase) (p55-BLK) [Canis familiaris].	370	e-102	O
		LOC475032	PREDICTED: similar to fyn proto-oncogene isoform 6 [Canis familiaris].	321	9e-88	O
		LOC475032	PREDICTED: similar to fyn proto-oncogene isoform 2 [Canis familiaris].	321	9e-88	O
		LOC475032	PREDICTED: similar to fyn proto-oncogene isoform 7 [Canis familiaris].	318	6e-87	O
		LOC490532	PREDICTED: similar to Proto-oncogene tyrosine-protein kinase YES (p61-YES) (C-YES) [Canis familiaris].	313	1e-85	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		LCK	lymphocyte-specific protein tyrosine kinase [Bos taurus].	688	0.0	O
		LYN	tyrosine-protein kinase Lyn [Bos taurus].	388	e-108	O
		HCK	hemopoietic cell kinase isoform 1 [Bos taurus].	385	e-107	O
		BLK	tyrosine-protein kinase Blk [Bos taurus].	372	e-103	O
		HCK	hemopoietic cell kinase isoform 2 [Bos taurus].	333	2e-91	O
		FYN	tyrosine-protein kinase Fyn [Bos taurus].	321	9e-88	O
		YES1	tyrosine-protein kinase Yes [Bos taurus].	313	1e-85	O
		FGR	tyrosine-protein kinase Fgr [Bos taurus].	311	7e-85	O
		SRC	v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Bos taurus].	305	5e-83	O
		FRK	PREDICTED: tyrosine-protein kinase FRK-like [Bos taurus].	267	1e-71	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		LCK	tyrosine-protein kinase Lck [Sus scrofa].	700	0.0	O
		LOC100622004	PREDICTED: tyrosine-protein kinase Lck-like [Sus scrofa].	699	0.0	O
		LOC100526085	PREDICTED: tyrosine-protein kinase HCK-like [Sus scrofa].	380	e-106	O
		LOC100623761	PREDICTED: tyrosine-protein kinase Blk-like [Sus scrofa].	374	e-104	O
		LOC100627269	PREDICTED: tyrosine-protein kinase Blk-like [Sus scrofa].	374	e-104	O
		FYN	tyrosine-protein kinase Fyn [Sus scrofa].	321	5e-88	O
		SRC	PREDICTED: proto-oncogene tyrosine-protein kinase Src [Sus scrofa].	305	4e-83	O
		LOC100152890	PREDICTED: tyrosine-protein kinase Lyn-like [Sus scrofa].	288	4e-78	O
		FRK	PREDICTED: tyrosine-protein kinase FRK [Sus scrofa].	268	5e-72	O
		LOC100513738	PREDICTED: tyrosine-protein kinase transforming protein Fgr-like [Sus scrofa].	258	3e-69	O