Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-008705

Sequence: [FASTA format sequence] AGTTCCGTCC TGACAGAGTT TACAGCATAT ATTGGTGGAT TCTTGTCCAT AGTGCATCTG CTTTAAGAAT TAACGAAAGC AGTGTCAAGA CAGTAAGGAT TCACAGCATT TACCAAAAAT GCATCTAGGC GTGTTTACTC TCCTCTTGGC GACAATCGGC AGCGCCAGTG GCCACTACTA TGATGACGAC GATTATTACT TCCCCCTCTC GATTTATGGG CGATCATCGC CCAACTGTGC CCCGGAATGC AATTGCCCTG AAAGCTACCC AACGGCCATG TACTGCGATG AGCTGAAATT GAAAAGCGTG CCAATGGTGC CTCCTGGAAT CAAGTACCTT TACCTGAGAA ACAACCAGAT CGACCATATC GACGACAAGG CCTTTGAAAA TGTGACTGAT CTAGAGTGGC TCATTCTAGA TCATAACCTT CTAGAAAACT CCAAAATAAA AGGAAGAGTT TTCTCTAAAC TGAAGCAACT GAAGAAGCTG CATATAAATT ACAACAATCT GACCGAGTCT GTAGGCCCAC TCCCCAAATC CCTGGTGGAC CTGCAGCTCA CTAATAACAA AATCTCGAAG CTCGGCTCCT TTGATGGACT GGTCAACCTG ACTTTTATCC ACCTGCAACA CAATCAGCTG AAAGAGGATG CCGTTTCAGC GGCTTTTAGA GGTCTTAAGG GGCTCGAATA CCTTGACTTG AGCTTCAATC AGATGACCAA ACTGCCTTCT GGCCTCCCAG TATCTCTTCT AACTCTCTAC TTAGACAACA ATAAGATCAG CAACATCCCA GATGAGTATT TCAAGCATTT CAGTGGCCTG CAGTACCTGC GTTTGTCTCA TAATGAACTG GCTGATAGTG GAATACCTGG AAATTCTTTT AATTTATCAT CTCTGCTGGA GCTGGATCTC TCCTACAATA AGCTTAAAAA CATACCGACT GTCAATGAAA ACCTTGAAAA CTATTGCCCT GGAGTCAATG ACCTTGAAAA GTTTGAAGTA AAGAGCTTCT GTAAGATCTG GGGACCATTA TCCTACTCCA AGATCAAACT TTGGCGTTTG GATGGGCATC CGCTTCCCCA AACTAGTTCT ACACCTGACA TGTATGATTG CCTACCCGTA CCAATTGAAA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
LUM lumican precursor [Homo sapiens]. 575 e-164 O

FMOD fibromodulin precursor [Homo sapiens]. 282 5e-76 O

PRELP prolargin precursor [Homo sapiens]. 219 5e-57 O

PRELP prolargin precursor [Homo sapiens]. 219 5e-57 O

KERA keratocan precursor [Homo sapiens]. 215 5e-56 O

OMD osteomodulin precursor [Homo sapiens]. 212 4e-55 O

ASPN asporin isoform 1 preproprotein [Homo sapiens]. 136 4e-32 O

DCN decorin isoform a preproprotein [Homo sapiens]. 130 3e-30 O

DCN decorin isoform a preproprotein [Homo sapiens]. 130 3e-30 O

BGN biglycan preproprotein [Homo sapiens]. 126 4e-29 O

Locus	Definition	Score	E value	FL
LUM	lumican precursor [Homo sapiens].	575	e-164	O
FMOD	fibromodulin precursor [Homo sapiens].	282	5e-76	O
PRELP	prolargin precursor [Homo sapiens].	219	5e-57	O
PRELP	prolargin precursor [Homo sapiens].	219	5e-57	O
KERA	keratocan precursor [Homo sapiens].	215	5e-56	O
OMD	osteomodulin precursor [Homo sapiens].	212	4e-55	O
ASPN	asporin isoform 1 preproprotein [Homo sapiens].	136	4e-32	O
DCN	decorin isoform a preproprotein [Homo sapiens].	130	3e-30	O
DCN	decorin isoform a preproprotein [Homo sapiens].	130	3e-30	O
BGN	biglycan preproprotein [Homo sapiens].	126	4e-29	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Lum lumican precursor [Mus musculus]. 572 e-163 O

Fmod fibromodulin precursor [Mus musculus]. 276 2e-74 O

Kera keratocan precursor [Mus musculus]. 221 6e-58 O

Prelp prolargin precursor [Mus musculus]. 220 1e-57 O

Omd osteomodulin precursor [Mus musculus]. 206 4e-53 O

Aspn asporin preproprotein [Mus musculus]. 137 2e-32 O

Aspn asporin preproprotein [Mus musculus]. 137 2e-32 O

Dcn decorin preproprotein [Mus musculus]. 135 4e-32 O

Dcn decorin preproprotein [Mus musculus]. 135 4e-32 O

Bgn biglycan precursor [Mus musculus]. 123 2e-28 O

Locus	Definition	Score	E value	FL
Lum	lumican precursor [Mus musculus].	572	e-163	O
Fmod	fibromodulin precursor [Mus musculus].	276	2e-74	O
Kera	keratocan precursor [Mus musculus].	221	6e-58	O
Prelp	prolargin precursor [Mus musculus].	220	1e-57	O
Omd	osteomodulin precursor [Mus musculus].	206	4e-53	O
Aspn	asporin preproprotein [Mus musculus].	137	2e-32	O
Aspn	asporin preproprotein [Mus musculus].	137	2e-32	O
Dcn	decorin preproprotein [Mus musculus].	135	4e-32	O
Dcn	decorin preproprotein [Mus musculus].	135	4e-32	O
Bgn	biglycan precursor [Mus musculus].	123	2e-28	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC482599 PREDICTED: similar to Lumican precursor (Keratan sulfate proteoglycan lumican) (KSPG lumican) [Canis familiaris]. 585 e-167 O

LOC488560 PREDICTED: similar to fibromodulin precursor [Canis familiaris]. 283 2e-76 O

LOC482598 PREDICTED: similar to Keratocan precursor (KTN) (Keratan sulfate proteoglycan keratocan) isoform 1 [Canis familiaris]. 219 5e-57 O

LOC482598 PREDICTED: similar to Keratocan precursor (KTN) (Keratan sulfate proteoglycan keratocan) isoform 3 [Canis familiaris]. 219 5e-57 O

LOC488561 PREDICTED: similar to Prolargin precursor (Proline-arginine-rich end leucine-rich repeat protein) [Canis familiaris]. 218 6e-57 O

LOC610693 PREDICTED: similar to Osteomodulin precursor (Osteoadherin) (OSAD) (Keratan sulfate proteoglycan osteomodulin) (KSPG osteomodulin) [Canis familiaris]. 214 1e-55 O

LOC610685 PREDICTED: similar to Asporin precursor [Canis familiaris]. 137 2e-32 O

BGN biglycan precursor [Canis lupus familiaris]. 125 1e-28 O

LOC612501 PREDICTED: similar to Extracellular matrix protein 2 precursor (Matrix glycoprotein SC1/ECM2) [Canis familiaris]. 124 2e-28

LOC476361 PREDICTED: similar to Extracellular matrix protein 2 precursor (Matrix glycoprotein SC1/ECM2) [Canis familiaris]. 124 2e-28

Locus	Definition	Score	E value	FL
LOC482599	PREDICTED: similar to Lumican precursor (Keratan sulfate proteoglycan lumican) (KSPG lumican) [Canis familiaris].	585	e-167	O
LOC488560	PREDICTED: similar to fibromodulin precursor [Canis familiaris].	283	2e-76	O
LOC482598	PREDICTED: similar to Keratocan precursor (KTN) (Keratan sulfate proteoglycan keratocan) isoform 1 [Canis familiaris].	219	5e-57	O
LOC482598	PREDICTED: similar to Keratocan precursor (KTN) (Keratan sulfate proteoglycan keratocan) isoform 3 [Canis familiaris].	219	5e-57	O
LOC488561	PREDICTED: similar to Prolargin precursor (Proline-arginine-rich end leucine-rich repeat protein) [Canis familiaris].	218	6e-57	O
LOC610693	PREDICTED: similar to Osteomodulin precursor (Osteoadherin) (OSAD) (Keratan sulfate proteoglycan osteomodulin) (KSPG osteomodulin) [Canis familiaris].	214	1e-55	O
LOC610685	PREDICTED: similar to Asporin precursor [Canis familiaris].	137	2e-32	O
BGN	biglycan precursor [Canis lupus familiaris].	125	1e-28	O
LOC612501	PREDICTED: similar to Extracellular matrix protein 2 precursor (Matrix glycoprotein SC1/ECM2) [Canis familiaris].	124	2e-28
LOC476361	PREDICTED: similar to Extracellular matrix protein 2 precursor (Matrix glycoprotein SC1/ECM2) [Canis familiaris].	124	2e-28

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
LUM lumican precursor [Bos taurus]. 590 e-168 O

FMOD fibromodulin [Bos taurus]. 272 3e-73 O

KERA keratocan precursor [Bos taurus]. 221 1e-57 O

PRELP prolargin precursor [Bos taurus]. 213 2e-55 O

LOC100337501 PREDICTED: osteomodulin-like [Bos taurus]. 203 2e-52 O

OMD osteomodulin precursor [Bos taurus]. 201 1e-51 O

ASPN asporin precursor [Bos taurus]. 131 1e-30 O

DCN decorin precursor [Bos taurus]. 126 4e-29 O

PODNL1 PREDICTED: Podnl1 protein-like [Bos taurus]. 125 5e-29 O

PODNL1 PREDICTED: Podnl1 protein-like [Bos taurus]. 125 5e-29 O

Locus	Definition	Score	E value	FL
LUM	lumican precursor [Bos taurus].	590	e-168	O
FMOD	fibromodulin [Bos taurus].	272	3e-73	O
KERA	keratocan precursor [Bos taurus].	221	1e-57	O
PRELP	prolargin precursor [Bos taurus].	213	2e-55	O
LOC100337501	PREDICTED: osteomodulin-like [Bos taurus].	203	2e-52	O
OMD	osteomodulin precursor [Bos taurus].	201	1e-51	O
ASPN	asporin precursor [Bos taurus].	131	1e-30	O
DCN	decorin precursor [Bos taurus].	126	4e-29	O
PODNL1	PREDICTED: Podnl1 protein-like [Bos taurus].	125	5e-29	O
PODNL1	PREDICTED: Podnl1 protein-like [Bos taurus].	125	5e-29	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LUM lumican [Sus scrofa]. 645 0.0 O

LOC100526237 PREDICTED: fibromodulin-like isoform 2 [Sus scrofa]. 282 3e-76 O

LOC100526237 PREDICTED: fibromodulin-like isoform 1 [Sus scrofa]. 282 3e-76 O

LOC100623225 PREDICTED: fibromodulin-like [Sus scrofa]. 254 6e-68 O

LOC100157843 PREDICTED: keratocan-like [Sus scrofa]. 222 3e-58 O

LOC100511032 PREDICTED: prolargin-like [Sus scrofa]. 220 1e-57 O

LOC100511925 PREDICTED: osteomodulin-like [Sus scrofa]. 216 2e-56 O

ASPN asporin [Sus scrofa]. 133 2e-31 O

DCN decorin precursor [Sus scrofa]. 126 3e-29 O

LOC100513269 PREDICTED: podocan-like protein 1-like [Sus scrofa]. 125 3e-29 O

Locus	Definition	Score	E value	FL
LUM	lumican [Sus scrofa].	645	0.0	O
LOC100526237	PREDICTED: fibromodulin-like isoform 2 [Sus scrofa].	282	3e-76	O
LOC100526237	PREDICTED: fibromodulin-like isoform 1 [Sus scrofa].	282	3e-76	O
LOC100623225	PREDICTED: fibromodulin-like [Sus scrofa].	254	6e-68	O
LOC100157843	PREDICTED: keratocan-like [Sus scrofa].	222	3e-58	O
LOC100511032	PREDICTED: prolargin-like [Sus scrofa].	220	1e-57	O
LOC100511925	PREDICTED: osteomodulin-like [Sus scrofa].	216	2e-56	O
ASPN	asporin [Sus scrofa].	133	2e-31	O
DCN	decorin precursor [Sus scrofa].	126	3e-29	O
LOC100513269	PREDICTED: podocan-like protein 1-like [Sus scrofa].	125	3e-29	O

Assembly Members: 9 TOP

Library Plate Loc. Read Name Accession Full Seq.

CLNT1 0127 G09 CLNT1_0127_G09.b HX221251
HTMT1 0137 B10 HTMT1_0137_B10.b HX225591
OVRT1 0045 H05 OVRT1_0045_H05.b FS690105 AK400596
SKNB1 0010 H01 SKNB1_0010_H01.b DB800597
SKNB1 0017 G12 SKNB1_0017_G12.b
SKNB1 0043 E02 SKNB1_0043_E02.b DB802414
SKNB1 0071 F09 SKNB1_0071_F09.b DB804342
TCH01 0012 C07 TCH01_0012_C07.b CJ023325 AK237917
TCH01 0069 E11 TCH01_0069_E11.b CJ027386

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
262 A 5 0 0.556 W S GAA/E
G 4 0 0.444 GAG/E

Alignment: TOP

20110601C-008705 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
OVRT1_0045_H05.b : ncccacgtcagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SKNB1_0010_H01.b :                                                 nnnaacgtcacg
HTMT1_0137_B10.b :                            tttttccgagagtagaggxxxxxxxxxxxxxxx
SKNB1_0043_E02.b :                                                    nnnnaaagt
TCH01_0012_C07.b :               nnnggctaggactatgacxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SKNB1_0071_F09.b :                                                           nn
SKNB1_0017_G12.b :                                                             
CLNT1_0127_G09.b :                                nggaatttnnnnnnnncccgttcgcgtta
TCH01_0069_E11.b :                                                             


20110601C-008705 : ........AGTTCCGTCCTGACAGAGTTTACAGCATATATTGGTGGATTCTTGTCCATAG
                   ---------+---------+---------+---------+---------+---------+ 52
OVRT1_0045_H05.b : xxxxxxxxAGTTCCGTCCTGACAGAGTTTACAGCATATATTGGTGGATTCTTGTCCATAG
SKNB1_0010_H01.b : ttggctctggagttcgtcctgacGAGTTTACAGCATATATTGGTGGATTCTTGTCCATAT
HTMT1_0137_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxgACAGCATATATTGGTGGATTCTTGTCCATAG
SKNB1_0043_E02.b : nnnnnnnntggcacttgtgcatgnagagttacGCATATATTGGTGGATTCTTGTCCATAG
TCH01_0012_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTATATTGGTGGATTCTTGTCCATAG
SKNB1_0071_F09.b : nnnggtatnnnnnnnncccgcgctggctcggntgcatatTTGGTGGATTCTTGTCCATAG
SKNB1_0017_G12.b :            ncctcgacgcgctggcgctggctctggtaTGGTGGATTCTTGTCC*TAG
CLNT1_0127_G09.b : cgaggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCATAG
TCH01_0069_E11.b :       nnggttgtgacttgacagtttgtcacxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-008705 : TGCATCTGCTTTAAGAATTAACGAAAGCAGTGTCAAGACAGTAAGGATTCACAGCATTTA
                   ---------+---------+---------+---------+---------+---------+ 112
OVRT1_0045_H05.b : TGCATCTGCTTTAAGAATTAACGAAAGCAGTGTCAAGACAGTAAGGATTCACAGCATTTA
SKNB1_0010_H01.b : TGCATCTGCTTTAAGAATTAACGAAAGCAGTGTCAAGACTGTAAGGATTCACAGCATTTA
HTMT1_0137_B10.b : TGCATCTGCTTTAAGAATTAACGAAAGCAGTGTCAAGACAGTAAGGATTCACAGCATTTA
SKNB1_0043_E02.b : TGCATCTGCTTTAAGAATTAACGAAAGCAGTGTCAAGACAGTAAGGATTCACAGCATTTA
TCH01_0012_C07.b : TGCATCTGCTTTAAGAATTAACGAAAGCAGTGTCAAGACAGTAAGGATTCACAGCATTTA
SKNB1_0071_F09.b : TGCATCTGCTTTAAGAATTAACGAAAGCAGTGTCAAGACAGTAAGGATTCACAGCATTTA
SKNB1_0017_G12.b : TGCATCTGCTTTAAGAATTAACGAAAGCAGTGTCAAGACAGTAAGGATTCACAGCATTTA
CLNT1_0127_G09.b : TGCATCTGCTTTAAGAATTAACGAAAGCAGTGTCAAGACAGTAAGGATTCACAGCATTTA
TCH01_0069_E11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxGCAGTGTCAAGACAGTAAGGATTCACAGCATTTA


20110601C-008705 : CCAAAAATGCATCTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC
                   ---------+---------+---------+---------+---------+---------+ 172
OVRT1_0045_H05.b : CCAAAAATGCATCTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC
SKNB1_0010_H01.b : CCAAAAATGCATCTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC
HTMT1_0137_B10.b : CCAAAAATGCATCTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC
SKNB1_0043_E02.b : CCAAAAATGCAACTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC
TCH01_0012_C07.b : CCAAAAATGCATCTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC
SKNB1_0071_F09.b : CCAAAAATGCATCTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC
SKNB1_0017_G12.b : CCAAAAATGCATCTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC
CLNT1_0127_G09.b : CCAAAAATGCATCTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC
TCH01_0069_E11.b : CCAAAAATGCATCTAGGCGTGTTTACTCTCCTCTTGGCGACAATCGGCAGCGCCAGTGGC


20110601C-008705 : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC
                   ---------+---------+---------+---------+---------+---------+ 232
OVRT1_0045_H05.b : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC
SKNB1_0010_H01.b : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC
HTMT1_0137_B10.b : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC
SKNB1_0043_E02.b : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC
TCH01_0012_C07.b : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC
SKNB1_0071_F09.b : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC
SKNB1_0017_G12.b : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC
CLNT1_0127_G09.b : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC
TCH01_0069_E11.b : CACTACTATGATGACGACGATTATTACTTCCCCCTCTCGATTTATGGGCGATCATCGCCC


20110601C-008705 : AACTGTGCCCCGGAATGCAATTGCCCTGAAAGCTACCCAACGGCCATGTACTGCGATGAG
                   ---------+---------+---------+---------+---------+---------+ 292
OVRT1_0045_H05.b : AACTGTGCCCCGGAATGCAATTGCCCTGAGAGCTACCCAACGGCCATGTACTGCGATGAG
SKNB1_0010_H01.b : AACTGTGCCCCGGAATGCAATTGCCCTGAAAGCTACCCAACGGCCATGTACTGCGATGAG
HTMT1_0137_B10.b : AACTGTGCCCCGGAATGCAATTGCCCTGAGAGCTACCCAACGGCCATGTACTGCGATGAG
SKNB1_0043_E02.b : AACTGTGCCCCGGAATGCAATTGCCCTGAAAGCTACCCAACGGCCATGTACTGCGATGAG
TCH01_0012_C07.b : AACTGTGCCCCGGAATGCAATTGCCCTGAAAGCTACCCAACGGCCATGTACTGCGATGAG
SKNB1_0071_F09.b : AACTGTGCCCCGGAATGCAATTGCCCTGAAAGCTACCCAACGGCCATGTACTGCGATGAG
SKNB1_0017_G12.b : AACTGTGCCCCGGAATGCAATTGCCCTGAAAGCTACCCAACGGCCATGTACTGCGATGAG
CLNT1_0127_G09.b : AACTGTGCCCCGGAATGCAATTGCCCTGAGAGCTACCCAACGGCCATGTACTGCGATGAG
TCH01_0069_E11.b : AACTGTGCCCCGGAATGCAATTGCCCTGAGAGCTACCCAACGGCCATGTACTGCGATGAG


20110601C-008705 : CTGAAATTGAAAAGCGTGCCAATGGTGCCTCCTGGAATCAAGTACCTTTACCTGAGAAAC
                   ---------+---------+---------+---------+---------+---------+ 352
OVRT1_0045_H05.b : CTGAAATTGAAAAGCGTGCCAATGGTGCCTCCTGGAATCAAGTACCTTTACCTGAGAAAC
SKNB1_0010_H01.b : CTGAAATTGAAAAGCGTGCCAATGGTGCCTCCTGGAATCAAGTACCTTTACCTGAGAAAC
HTMT1_0137_B10.b : CTGAAATTGAAAAGCGTGCCAATGGTGCCTCCTGGAATCAAGTACCTTTACCTGAGAAAC
SKNB1_0043_E02.b : CTGAAATTGAAAAGCGTGCCAATGGTGCCTCCTGGAATCAAGTACCTTTACCTGAGAAAC
TCH01_0012_C07.b : CTGAAATTGAAAAGTGTGCCAATGGTGCCTCCTGGAATCAAGTACCTTTACCTTAGAAAC
SKNB1_0071_F09.b : CTGAAATTGAAAAGCGTGCCAATGGTGCCTCCTGGAATCAAGTACCTTTACCTGAGAAAC
SKNB1_0017_G12.b : CTGAAATTGAAAAGCGTGCCAATGGTGCCTCCTGGAATCAAGTACCTTTACCTGAGAAAC
CLNT1_0127_G09.b : CTGAAATTGAAAAGCGTGCCAATGGTGCCTCCTGGAATCAAGTACCTTTACCTGAGAAAC
TCH01_0069_E11.b : CTGAAATTGAAAAGCGTGCCGATGGTGCCTCCTGGAATCAAGTACCTTTACCTGAGAAAC


20110601C-008705 : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC
                   ---------+---------+---------+---------+---------+---------+ 412
OVRT1_0045_H05.b : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC
SKNB1_0010_H01.b : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC
HTMT1_0137_B10.b : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC
SKNB1_0043_E02.b : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC
TCH01_0012_C07.b : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC
SKNB1_0071_F09.b : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC
SKNB1_0017_G12.b : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC
CLNT1_0127_G09.b : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC
TCH01_0069_E11.b : AACCAGATCGACCATATCGACGACAAGGCCTTTGAAAATGTGACTGATCTAGAGTGGCTC


20110601C-008705 : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG
                   ---------+---------+---------+---------+---------+---------+ 472
OVRT1_0045_H05.b : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG
SKNB1_0010_H01.b : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG
HTMT1_0137_B10.b : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG
SKNB1_0043_E02.b : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG
TCH01_0012_C07.b : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG
SKNB1_0071_F09.b : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG
SKNB1_0017_G12.b : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG
CLNT1_0127_G09.b : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG
TCH01_0069_E11.b : ATTCTAGATCATAACCTTCTAGAAAACTCCAAAATAAAAGGAAGAGTTTTCTCTAAACTG


20110601C-008705 : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC
                   ---------+---------+---------+---------+---------+---------+ 532
OVRT1_0045_H05.b : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC
SKNB1_0010_H01.b : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC
HTMT1_0137_B10.b : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC
SKNB1_0043_E02.b : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC
TCH01_0012_C07.b : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC
SKNB1_0071_F09.b : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC
SKNB1_0017_G12.b : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC
CLNT1_0127_G09.b : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC
TCH01_0069_E11.b : AAGCAACTGAAGAAGCTGCATATAAATTACAACAATCTGACCGAGTCTGTAGGCCCACTC


20110601C-008705 : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT
                   ---------+---------+---------+---------+---------+---------+ 592
OVRT1_0045_H05.b : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT
SKNB1_0010_H01.b : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT
HTMT1_0137_B10.b : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT
SKNB1_0043_E02.b : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT
TCH01_0012_C07.b : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT
SKNB1_0071_F09.b : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT
SKNB1_0017_G12.b : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT
CLNT1_0127_G09.b : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT
TCH01_0069_E11.b : CCCAAATCCCTGGTGGACCTGCAGCTCACTAATAACAAAATCTCGAAGCTCGGCTCCTTT


20110601C-008705 : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACACAATCAGCTGAAAGAGGATGCC
                   ---------+---------+---------+---------+---------+---------+ 652
OVRT1_0045_H05.b : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACACAATCAGCTGAAAGAGGATGCC
SKNB1_0010_H01.b : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACCCGATCAGCTGAAAGAGGATGCC
HTMT1_0137_B10.b : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACACAATCAGCTGAAAGAGGATGCC
SKNB1_0043_E02.b : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACACAATCAGCTGAAAGAGGATGCC
TCH01_0012_C07.b : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACACAATCAGCTGAAAGAGGATGCC
SKNB1_0071_F09.b : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACACAATCAGCTGAAAGAGGATGCC
SKNB1_0017_G12.b : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACACAATCAGCTGAAAGAGGATGCC
CLNT1_0127_G09.b : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACACAATCAGCTGAAAGAGGATGCC
TCH01_0069_E11.b : GATGGACTGGTCAACCTGACTTTTATCCACCTGCAACACAATCAGCTGAAAGAGGATGCC


20110601C-008705 : GTTTCAGCGGCTTTTAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGAGCTTCAATCAG
                   ---------+---------+---------+---------+---------+---------+ 712
OVRT1_0045_H05.b : GTTTCAGCGGCTTTTAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGAGCTTCAATCAG
SKNB1_0010_H01.b : GTTTCAGCGGCTTTTAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGAGCTTCAATCAG
HTMT1_0137_B10.b : GTTTCAGCGGCTTTTAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGAGCTTCAATCAG
SKNB1_0043_E02.b : GTTTCAGCGGCTTTTAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGAGCTTCAATCAG
TCH01_0012_C07.b : GTTTCAGCGGCTTTTAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGAGCTTCAATCAG
SKNB1_0071_F09.b : GTTTCAGCGGCTTTTAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGAGCTTCAATCAG
SKNB1_0017_G12.b : GTTTCAGCGGCTTTTAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGANGCTTCATCAG
CLNT1_0127_G09.b : GTTTCAGCGGCTTTCAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGAGCTTCAATCAG
TCH01_0069_E11.b : GTTTCAGCGGCTTTTAGAGGTCTTAAGGGGCTCGAATACCTTGACTTGAGCTTCAATCAG


20110601C-008705 : ATGACCAAACTGCCTTCTGGCCTCCCAGTATCTCTTCTAACTCTCTACTTAGACAACAAT
                   ---------+---------+---------+---------+---------+---------+ 772
OVRT1_0045_H05.b : ATGACCAAACTGCCTTCTGGCCTCCCAGTATCTCTTCTAACTCTCTACTTAGACAGCAAT
SKNB1_0010_H01.b : ATGACCAAACTGCCTTCTGGCCTCCCAGTATCTCTTCTAACTCTCTACTTAGACAACAAT
HTMT1_0137_B10.b : ATGACCAAACTGCCTTCTGGCCTCCCAGTATCTCTTCTAACTCTCTACTTAGACAACAAT
SKNB1_0043_E02.b : ATGACCAAACTGCCTTCTGGCCTCCCAGTATCTCTTCTAACTCTCTACTTAGACAACAAT
TCH01_0012_C07.b : ATGACCAAACTGCCTTCTGGCCTCCCAGTATCTCTTCTAACTCTCTACTTAGACAACAAT
SKNB1_0071_F09.b : ATGACCAAACTGCCTTCTGGCCTCCCAGTATCTCTTCTAACTCTCTACTTAGACAACAAT
SKNB1_0017_G12.b : ATGACCAAACTGCCTTCTGGCCTCCCAGTATCTCTCCTAACTCTCTACTTAGACAACAAT
CLNT1_0127_G09.b : ATGACAAAACTGCCTTCTGGCCTCCCAGTATCTCTTCTAACTCTCTACTTAGACAACAAT
TCH01_0069_E11.b : ATGACCAAACTGCCTTCTGGCCTCCCAGTATCTCTTCTAACTCTCTACTTAGACAACAAT


20110601C-008705 : AAGATCAGCAACATCCCAGATGAGTATTTCAAGCATTTCAGTGGCCTGC*AGTACCTGCG
                   ---------+---------+---------+---------+---------+---------+ 831
OVRT1_0045_H05.b : AAGATCAGCAACATCCCAGATGAGTATTTC*AGCATTTCAGTGGCCTGC*AGTACCTGCG
SKNB1_0010_H01.b : AAGATCANGCACATCCCAGATGAGTATTTCAAGCATTTCAGTGGCCTGC*AGTACCTGCG
HTMT1_0137_B10.b : AAGATCAGCAACATCCCAGATGAGTATTTCAAGCATTTCAGTGGCCTGC*AGTACCTGCG
SKNB1_0043_E02.b : AAGATCAGCAACATCCCAGATGAGTATTTCNAGCATTTCAGTGGCCTGCNAGTACCTGCG
TCH01_0012_C07.b : AAGATCAGCAACATCCCAGATGAGTATTTCAAGCATTTCAGTGGCCTGC*AGTACCTGCG
SKNB1_0071_F09.b : AAGATCAGCAACATCCCAGATGAGTATTTCNAGCATTTCAGTGGCCTGC*AGTACCTGCG
SKNB1_0017_G12.b : AAGATCANGCACATCCCCGATGAGTATTTCAAGCATTTCAGTGGCCTGC*AGTACCTGCG
CLNT1_0127_G09.b : AAGATCAGCAACATCCCAGATGAGTATTTCAAGCATTTCAGTGGCCTGC*AGTACCTGCG
TCH01_0069_E11.b : AAGATCAGCAACATCCCAGATGAGTATTTCAAGCATTTCAGTGGCCTGC*AGTACCTGCG


20110601C-008705 : TTTGTCTCATAATGAACTGGCTGATAGTGG*AATACCTGGAAATTCTTTTAATTTATCAT
                   ---------+---------+---------+---------+---------+---------+ 890
OVRT1_0045_H05.b : TTTGTCTCATAATGAACTGGCTGATAGTGG*AATACCCTGGAATTCTTTTAATTTATCAT
SKNB1_0010_H01.b : TTTGTCTCATAATGAACTGGCTGATAGTGG*AATACCTGGAAAATCTTTTAAT*TATCAT
HTMT1_0137_B10.b : TTTGTCTCATAATGAACTGGCTGATAGTGG*AATACCTGGAAATTCT*TTAATTTATCAT
SKNB1_0043_E02.b : TTTGTCTCATAATGAACTGGCTGATAGTGG*AATACCTGGGAATTCTTTTAATTTATCAT
TCH01_0012_C07.b : TTTGTCTCATAATGAACTGGCTGATAGTGG*AATACCTGGGAATTCTTTTTA*CTATCAT
SKNB1_0071_F09.b : TTTGTCTCATAATGAACTGGCTGATAGTGG*AATACCTGGAAATTCTTTTAATTTATCAT
SKNB1_0017_G12.b : TTTGTCTCATAATGAACTGGCTGATAGTGGGAATACTGGGAAATTTCTTTAAATTATCAT
CLNT1_0127_G09.b : TTTGTCTCATAATGAACTGGCTGATAGTGG*AATACCTGGAAAATCTTTTTAATTAACAT
TCH01_0069_E11.b : TTTGTCTCATAATGAACTGGCTGATAGTGG*AATACCTGGAAATTCTTTTAATTTATCAT


20110601C-008705 : CTCTGCTGG*AGCTGGATCTCTCCTACAATAAGCTTAAAAACATACCGACTGTCAATGAA
                   ---------+---------+---------+---------+---------+---------+ 949
OVRT1_0045_H05.b : CTCTGCTGG*AGCGGATCCTCTCCTACA*TAAGCTTAAAAACATACCGACTGTCAATGAA
SKNB1_0010_H01.b : CTCTGCTGG*AGCTGGATCTCTCCTACAATAAGCTTAAAAacatacgacctgtcatgaaa
HTMT1_0137_B10.b : CTCTGCTGG*AGCTGGATCTCTCCCTACATAAGCTTAAAAACATACCGACTGTNCATGAA
SKNB1_0043_E02.b : CTCTGCTGGNAGCTGGATCTCTCCCTACATAAGCTTANA*ACATACCGACTGgtcatgaa
TCH01_0012_C07.b : CTCTGCTGG*AGCTGGATCTCTCCTACAATAAAGCTAAAAACATACcgactggtcatgaa
SKNB1_0071_F09.b : CTCTGCTGG*AGCTGGATCTCTCCTACAATAAGCTTAAAAACATACCGACTGTCAATGAA
SKNB1_0017_G12.b : CTCTGCTGGgagctgggatctctcctaaccataagccttaaaaaacattaccgacctgtt
CLNT1_0127_G09.b : CTCTGCTGG*AGCTGGATCTCTCCTACAATAAGCTAAAAAACATACCGACTGTTCATGGA
TCH01_0069_E11.b : CTCTGCTGG*AGCTGGATCTCTCCTACATTAAGCTTAAAA*CATACCGACTGTCAATGAA


20110601C-008705 : AACCTTGAAAACTATTGCCCTGGAGTCAATGACCTTGAAAAGTTTGAAGTAAAGAGCTTC
                   ---------+---------+---------+---------+---------+---------+ 1009
OVRT1_0045_H05.b : Aaccttggaaactatttactggaaagtcaatgaacttgaaaagttgaaagtaaaagcttc
SKNB1_0010_H01.b : ccttgaaaactattaccctgaagtcaatgaacttgaaaagtttgagtaaagagcttctgt
HTMT1_0137_B10.b : AACCTTGAAActanntactgnaggtcatgaaactgaaaagtttgaataaagacttcngta
SKNB1_0043_E02.b : aactttgaaactattacctggaggtcatgaacttgaaaagtttgaagtaagagcttctgt
TCH01_0012_C07.b : aaccttgaaaaactatacctgganggntcatgacttgaaaagttnngagtaaagagcttt
SKNB1_0071_F09.b : Accttgaaaactattacctggaggtcatgaacttgaaaagtttgaaataaagagctctgt
SKNB1_0017_G12.b : caatggaaaaacccttggaaaaacttattacccctgggagggtccaatgaaacctttgaa
CLNT1_0127_G09.b : AACCTTGAAAActattactgggagtcaatgaactgaaaaatttgaaataagaacttcgta
TCH01_0069_E11.b : AACCTTGAAAACTATTGCCCTGGAGTCAATGACCTTGAAAAGTTTGAAGTAAAGAGCTTC


20110601C-008705 : TGTAAGATCTGGGGACCATTATCCTACTCCAAGATCAAACTTTGGCGTTTGGATGGGCAT
                   ---------+---------+---------+---------+---------+---------+ 1069
OVRT1_0045_H05.b : ggaaatatccgggaaccttatcccaccccaaaataaaaattttgcgtttggagggaatcg
SKNB1_0010_H01.b : aagatcctg                                                  
HTMT1_0137_B10.b : agatccgggacattatcctactccagatcaaacattgcgtttggatggaatccgatcacc
SKNB1_0043_E02.b : aagatctgggaccatatcctactccagatnaacatttgggtttggagggaatccataccc
TCH01_0012_C07.b : ctgtagatcctgggacattatcctactccagatccaactttgcgtttggatggcatcgca
SKNB1_0071_F09.b : aagatcctgggaccttatcctactccagatcaaactttgcctttgaatggcatcgcatac
SKNB1_0017_G12.b : aaaggtttttgaagttaaaaggaacccttttctgttaaaaaaat               
CLNT1_0127_G09.b : aaatccgggaacattacctactcaagatcaaatttgggtttggagggaatccctccccca
TCH01_0069_E11.b : TGTAAGATCTGGGGACCATTATCCTACTCCAAGATCAAACTTTGGCGTTTGGATGGGCAT


20110601C-008705 : CCGCTTCCCCAAACTAGTTCTACACCTGACATGTATGATTGCCTACCCGTACCAATTGAA
                   ---------+---------+---------+---------+---------+---------+ 1129
OVRT1_0045_H05.b : catcccccaaactagtttaaccccggaaatgttagaatggctccccccaacaaaggaaac
SKNB1_0010_H01.b :                                                             
HTMT1_0137_B10.b : aaattatctacccctaaatgtataatgctccccctaccaaggaaacccggtaattaaacc
SKNB1_0043_E02.b : aactaatcacactgaatggataatggctaccctacaatgaatccccttaataaattacaa
TCH01_0012_C07.b : tcacccaactagtctacaactgacatgtatgatgtctacccgtacaatgaaatcacggta
SKNB1_0071_F09.b : ccaactagtctaccccgacatgtatgaatgtctaccctaccaaagaaatccctttattaa
SKNB1_0017_G12.b :                                                             
CLNT1_0127_G09.b : actagtctaccccggatgttagatgtgcaccctacaaagaaaccccttaataattctaca
TCH01_0069_E11.b : CCGCTTCCCCAAACTAGTTCTACACCTGACATGTATGATTGCCTACCCGTACCAATTGAA


20110601C-008705 : A...........................................................
                   ---------+---------+---------+---------+---------+---------+ 1130
OVRT1_0045_H05.b : cccgtttattaaattcccaatttccacctaccggggggtttcccggggccccctttttgg
SKNB1_0010_H01.b :                                                             
HTMT1_0137_B10.b : ccattccccctatcggaggtttccaggccccctttgggttgggtttgtgggcctttttaa
SKNB1_0043_E02.b : ttccacatccgagttatctagcactttttt                             
TCH01_0012_C07.b : attaaatcactaatccactaaacggagtaatctagggcaccttttatgttaggggaattg
SKNB1_0071_F09.b : atctccaatccccctacggagaaatccagccccctttttgttaggggattttgaaccctt
SKNB1_0017_G12.b :                                                             
CLNT1_0127_G09.b : attcacttatcggggtaacccaggcccctttttggttggttattgggacccttttaaaat
TCH01_0069_E11.b : Accccgttaattaaatccaccattcccactatccgaaggttaacccaagcccagcattta


20110601C-008705 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1130
OVRT1_0045_H05.b : gtagggttttttggggaccccttttaaaaaaacatttttgggtgaaaaacccccccgaat
SKNB1_0010_H01.b :                                                             
HTMT1_0137_B10.b : aacattttttgggaataaccccccaatttaatccgggaaaagtttgaaatttcctcttaa
SKNB1_0043_E02.b :                                                             
TCH01_0012_C07.b : ggatcctt                                                   
SKNB1_0071_F09.b : ttaaaaaacctttttttgttgatataccccccatttaatttcggaaa            
SKNB1_0017_G12.b :                                                             
CLNT1_0127_G09.b : caattttgggaaaatctccccgatttatttcgggaaatttttaatttctcgtttaaaaaa
TCH01_0069_E11.b : aggttttggtatttgggagcccttttaaaaattccatttggtggtgataaaactcc   


20110601C-008705 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1130
OVRT1_0045_H05.b : tttgtattggagg                                              
SKNB1_0010_H01.b :                                                             
HTMT1_0137_B10.b : aaaaaaaaagggggtttttaaaaaaaaaaacacccccaaaggttttatttggctccccca
SKNB1_0043_E02.b :                                                             
TCH01_0012_C07.b :                                                             
SKNB1_0071_F09.b :                                                             
SKNB1_0017_G12.b :                                                             
CLNT1_0127_G09.b : agaagggggttttttccaaaaataaaccccccccaaaaaggttttatattctccctcacc
TCH01_0069_E11.b :                                                             


20110601C-008705 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1130
OVRT1_0045_H05.b :                                                             
SKNB1_0010_H01.b :                                                             
HTMT1_0137_B10.b : aaggaaagggggtgggggcggtgttacactttgaaagaaaccgttgccgacccctgtttt
SKNB1_0043_E02.b :                                                             
TCH01_0012_C07.b :                                                             
SKNB1_0071_F09.b :                                                             
SKNB1_0017_G12.b :                                                             
CLNT1_0127_G09.b : agaggggggggtgggggggtttacctttgaagagaacgggcgaaaacccccnnnnngaga
TCH01_0069_E11.b :                                                             


20110601C-008705 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1130
OVRT1_0045_H05.b :                                                             
SKNB1_0010_H01.b :                                                             
HTMT1_0137_B10.b : taagagataacaaaaacttttnnnncgatttctcctcctcttctaaaaaata       
SKNB1_0043_E02.b :                                                             
TCH01_0012_C07.b :                                                             
SKNB1_0071_F09.b :                                                             
SKNB1_0017_G12.b :                                                             
CLNT1_0127_G09.b : attaaaaaaaannntctcaaagtggaaacaaaaaannnnncnnnnnnn           
TCH01_0069_E11.b :