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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008896

Length: 991

Sequence [FASTA format sequence]
TAGAGTCTCA GCTCAGCAGA GCAGCGGCAG GAGGCGCGCA TCCCGGCTCC GGCTTCTGCT
CCCGCTCCGG AGGATGAGGC GCTCTCAGGA TGCTGCCGCT CCTGGTAGTG CCGCTGGCGA
TGTTCCTGTG CCTGCTTCTA GGCTCCTGCG CGCACGGTAA GGATCCAGGG TCTAGCCCGG
CCCTGCCCTC TCTGCGCCCG CCACGCTCCT TCTCCCACCC GTCGTCAGTC ACCCCTACGT
TGAAGTTCTG TGTACCACGG AGAACCCCGT CTGGCTGGCC CTTGCCGGAG AGGGGCTCCC
ATTTTCTCCC GCCTCCCCTG ATCTCCCTCA TTCTGGCCAG CCTGGGTCTC AGGCTCGCCC
GTTGTGGAAG TGGAAGAGGC TGAGATTGAT GGGGGAGTGG GGAAGTGTAG GTAGAGAAGT
TAAATAACCC CACCACCACC ACCGTCCACC CACCTCCCTG TGAGTCATAA ATTTATCCTC
GGCTTTTTTC TGCTTAAAAT GCTGGGACCG TTTCTCCCTC TGGGGAATTA CTTTGATTTC
AGCCTGAGTT TACCTTCCCT TAGCTCTCTG ATTAACCCCT TGCTGCTCCA TGCCATCTCA
CCCCCATCTC AGCTCTTATC TCCCACTATC TCCTGTCACC TACATCGGAT CATCCATTCT
CCTTCTTTAG CCTCTAATGC TCTGGCCCTG ACATCTGCCT CCCTCCTCCC TACTGCTACC
CCTTAGCTGT CCTAACCCAG CCAGAAAGTT TCTGCAACTG AGAAGAGCAA ACCCTGGAGA
GAGAGAAAGA GAATGAAAGG GTGGGGAGTT GGAGGGACCA GGAGCAGAGG CAGGGAGAGC
AGGGCCTGAA AGCACTTCTA CAGTGACGCC AGAATACAAA GTAAGATATG TGGTCACCAG
TCACATGACC GAGAGCTGGA GTCGGGGACA TGCAGCCCAA ACACCACAAA GACCCACTGC
ATTTTTTCAC TTTCCATCTA GTGTTTTGAA A


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinIL10RAPREDICTED: LOW QUALITY PROTEIN: interleukin-10 receptor subunit alpha [Sus scrofa]. 51.29e-07O


Assembly Members: 10      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
CLNT10047H12CLNT1_0047_H12.bFS660812 
CLNT10073F05CLNT1_0073_F05.bFS662852 
LNG010001C06LNG01_0001_C06.bBP435359 AK231602
LNG010041C03LNG01_0041_C03.bBP435142 
PBL010047D03PBL01_0047_D03.bBW970855 AK348864
SPL010081H09SPL01_0081_H09.bCJ020360 
TCH010018B12TCH01_0018_B12.bCJ023748 
TCH010024G02TCH01_0024_G02.bCJ024229 
TCH010060C02TCH01_0060_C02.bCJ026694 AK350930
UTR010068B04UTR01_0068_B04.bBP463046 

  

SNPs: 6      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
119A200.200WSGCA/A
G800.800GCG/A
482A300.300W-
G700.700
538G300.300W-
T700.700
631C300.300W-
T700.700
642A700.700W-
C300.300
691A700.700W-
C300.300


Alignment:      TOP

20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
TCH01_0060_C02.b : nggctagtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0081_H09.b : nnttttgctaggactatnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0047_D03.b : ngatxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0018_B12.b : nnnnttatctggacttnaagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0073_F05.b : nggcttttnnnggnnnccctctgcgttcgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0047_H12.b : ttttccgttctgctgtcggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0024_G02.b : nnnggcttgtgacttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0001_C06.b : cgcaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0041_C03.b : cttgttttttggcttagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0068_B04.b : ccttttgggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-008896 : ....................TAGAGTCTCAGCTCAGCAGAGCAGCGGCAGGAGGCGCGCA
---------+---------+---------+---------+---------+---------+ 40
TCH01_0060_C02.b : xxxxxxxxxxxxxxxxxxxxTAGAGTCTCAGCTCAGCAGAGCAGCGGCAGGAGGCGCGCA
SPL01_0081_H09.b : xxxxxxxxxxxxxxxxxxxxxxxxGTCTCAGCTCAGCAGAGCAGCGGCAGGAGGCGCGCA
PBL01_0047_D03.b : xxxxxxxxxxxxxxxxxxxxxxxaGTCTCAGCTCAGCAGAGCAGCGGCAGGAGGCGCGCA
TCH01_0018_B12.b : xxxxxxxxxxxxxxxxxxxxxxxxGTCTCAGCTCAGCAGAGCAGCGGCAGGAGGCGCGCA
CLNT1_0073_F05.b : xxxxxxxxxxxxxxxxxxxxxxxxGTCTCAGCTCAGCAGAGCAGCGGCAGGAGGCGCGCA
CLNT1_0047_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxGTCTCAGCTCAGCAGAGCAGCGGCAGGAGGCGCGCA
TCH01_0024_G02.b : xxxxxxxxxxxxxxxxxxxxxxxxGTCTCAGCTCAGCAGAGCAGCGGCAGGAGGCGCGCA
LNG01_0001_C06.b : xxxxxxxxxxxxxxxxxxxxxxxaGTCTCAGCTCAGCAGAGCAGCGGCAGGAGGCGCGCA
LNG01_0041_C03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCAGAGCAGCGGCAGGAGGCGCGCA
UTR01_0068_B04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGCAGCGGCAGGAGGCGCGCA
20110601C-008896 : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
---------+---------+---------+---------+---------+---------+ 100
TCH01_0060_C02.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
SPL01_0081_H09.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
PBL01_0047_D03.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
TCH01_0018_B12.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
CLNT1_0073_F05.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
CLNT1_0047_H12.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
TCH01_0024_G02.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
LNG01_0001_C06.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
LNG01_0041_C03.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
UTR01_0068_B04.b : TCCCGGCTCCGGCTTCTGCTCCCGCTCCGGAGGATGAGGCGCTCTCAGGATGCTGCCGCT
20110601C-008896 : CCTGGTAGTGCCGCTGGCGATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
---------+---------+---------+---------+---------+---------+ 160
TCH01_0060_C02.b : CCTGGTAGTGCCGCTGGCGATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
SPL01_0081_H09.b : CCTGGTAGTGCCGCTGGCGATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
PBL01_0047_D03.b : CCTGGTAGTGCCGCTGGCGATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
TCH01_0018_B12.b : CCTGGTAGTGCCGCTGGCAATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
CLNT1_0073_F05.b : CCTGGTAGTGCCGCTGGCGATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
CLNT1_0047_H12.b : CCTGGTAGTGCCGCTGGCGATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
TCH01_0024_G02.b : CCTGGTAGTGCCGCTGGCAATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
LNG01_0001_C06.b : CCTGGTAGTGCCGCTGGCGATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
LNG01_0041_C03.b : CCTGGTAGTGCCGCTGGCGATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
UTR01_0068_B04.b : CCTGGTAGTGCCGCTGGCGATGTTCCTGTGCCTGCTTCTAGGCTCCTGCGCGCACGGTAA
20110601C-008896 : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
---------+---------+---------+---------+---------+---------+ 220
TCH01_0060_C02.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
SPL01_0081_H09.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
PBL01_0047_D03.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGTGCCCGCCACGCTCCTTCTCCCACCC
TCH01_0018_B12.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
CLNT1_0073_F05.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
CLNT1_0047_H12.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
TCH01_0024_G02.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
LNG01_0001_C06.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
LNG01_0041_C03.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
UTR01_0068_B04.b : GGATCCAGGGTCTAGCCCGGCCCTGCCCTCTCTGCGCCCGCCACGCTCCTTCTCCCACCC
20110601C-008896 : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
---------+---------+---------+---------+---------+---------+ 280
TCH01_0060_C02.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
SPL01_0081_H09.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
PBL01_0047_D03.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
TCH01_0018_B12.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
CLNT1_0073_F05.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
CLNT1_0047_H12.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
TCH01_0024_G02.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
LNG01_0001_C06.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
LNG01_0041_C03.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
UTR01_0068_B04.b : GTCGTCAGTCACCCCTACGTTGAAGTTCTGTGTACCACGGAGAACCCCGTCTGGCTGGCC
20110601C-008896 : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
---------+---------+---------+---------+---------+---------+ 340
TCH01_0060_C02.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
SPL01_0081_H09.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
PBL01_0047_D03.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
TCH01_0018_B12.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
CLNT1_0073_F05.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
CLNT1_0047_H12.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
TCH01_0024_G02.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
LNG01_0001_C06.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
LNG01_0041_C03.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
UTR01_0068_B04.b : CTTGCCGGAGAGGGGCTCCCATTTTCTCCCGCCTCCCCTGATCTCCCTCATTCTGGCCAG
20110601C-008896 : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
---------+---------+---------+---------+---------+---------+ 400
TCH01_0060_C02.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
SPL01_0081_H09.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
PBL01_0047_D03.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
TCH01_0018_B12.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
CLNT1_0073_F05.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
CLNT1_0047_H12.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
TCH01_0024_G02.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
LNG01_0001_C06.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
LNG01_0041_C03.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
UTR01_0068_B04.b : CCTGGGTCTCAGGCTCGCCCGTTGTGGAAGTGGAAGAGGCTGAGATTGATGGGGGAGTGG
20110601C-008896 : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
---------+---------+---------+---------+---------+---------+ 460
TCH01_0060_C02.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
SPL01_0081_H09.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
PBL01_0047_D03.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
TCH01_0018_B12.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
CLNT1_0073_F05.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
CLNT1_0047_H12.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
TCH01_0024_G02.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
LNG01_0001_C06.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
LNG01_0041_C03.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
UTR01_0068_B04.b : GGAAGTGTAGGTAGAGAAGTTAAATAACCCCACCACCACCACCGTCCACCCACCTCCCTG
20110601C-008896 : TGAGTCATAAATTTATCCTCGGCTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
---------+---------+---------+---------+---------+---------+ 520
TCH01_0060_C02.b : TGAGTCATAAATTTATCCTCGGCTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
SPL01_0081_H09.b : TGAGTCATAAATTTATCCTCGACTTTTTTCTGCTTAAAATGCTGGGACCATTTCTCCCTC
PBL01_0047_D03.b : TGAGTCATAAATTTATCCTCGACTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
TCH01_0018_B12.b : TGAGTCATAAATTTATCCTCGGCTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
CLNT1_0073_F05.b : TGAGTCATAAATTTATCCTCGGCTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
CLNT1_0047_H12.b : TGAGTCATAAATTTATCCTCGACTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
TCH01_0024_G02.b : TGAGTCATAAATTTATCCTCGGCTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
LNG01_0001_C06.b : TGAGTCATAAATTTATCCTCGGCTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
LNG01_0041_C03.b : TGAGTCATAAATTTATCCTCGGCTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
UTR01_0068_B04.b : TGAGTCATAAATTTATCCTCGGCTTTTTTCTGCTTAAAATGCTGGGACCGTTTCTCCCTC
20110601C-008896 : TGGGGAATTACTTTGATTTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
---------+---------+---------+---------+---------+---------+ 580
TCH01_0060_C02.b : TGGGGAATTACTTTGATTTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
SPL01_0081_H09.b : TGGGGAATTACTTTGATGTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
PBL01_0047_D03.b : TGGGGAATTACTTTGATGTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
TCH01_0018_B12.b : TGGGGAATTACTTTGATTTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
CLNT1_0073_F05.b : TGGGGAATTACTTTGATTTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
CLNT1_0047_H12.b : TGGGGAATTACTTTGATGTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
TCH01_0024_G02.b : TGGGGAATTACTTTGATTTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
LNG01_0001_C06.b : TGGGGAATTACTTTGATTTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
LNG01_0041_C03.b : TGGGGAATTACTTTGATTTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
UTR01_0068_B04.b : TGGGGAATTACTTTGATTTCAGCCTGAGTTTACCTTCCCTTAGCTCTCTGATTAACCCCT
20110601C-008896 : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCTCCTGTCACC
---------+---------+---------+---------+---------+---------+ 640
TCH01_0060_C02.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCTCCTGTCACC
SPL01_0081_H09.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCCCCTGTCACC
PBL01_0047_D03.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCCCCTGTCACC
TCH01_0018_B12.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCTCCTGTCACC
CLNT1_0073_F05.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCTCCTGTCACC
CLNT1_0047_H12.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCCCCTGTCACC
TCH01_0024_G02.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCTCCTGTCACC
LNG01_0001_C06.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCTCCTGTCACC
LNG01_0041_C03.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCTCCTGTCACC
UTR01_0068_B04.b : TGCTGCTCCATGCCATCTCACCCCCATCTCAGCTCTTATCTCCCACTATCTCCTGTCACC
20110601C-008896 : TACATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGACATCTGCCT
---------+---------+---------+---------+---------+---------+ 700
TCH01_0060_C02.b : TACATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGACATCTGCCT
SPL01_0081_H09.b : TCCATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGCCATCTGCCT
PBL01_0047_D03.b : TCCATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGCCATCTGCCT
TCH01_0018_B12.b : TACATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGACATCTGCCT
CLNT1_0073_F05.b : TACATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGACATCTGCCT
CLNT1_0047_H12.b : TCCATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGCCATCTGCCT
TCH01_0024_G02.b : TACATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGACATCTGCCT
LNG01_0001_C06.b : TACATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGACATCTGCCT
LNG01_0041_C03.b : TACATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGACATCTGCCT
UTR01_0068_B04.b : TACATCGGATCATCCATTCTCCTTCTTTAGCCTCTAATGCTCTGGCCCTGACATCTGCCT
20110601C-008896 : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGCAACTG
---------+---------+---------+---------+---------+---------+ 760
TCH01_0060_C02.b : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGNCACTG
SPL01_0081_H09.b : CCCCTCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGCAACTG
PBL01_0047_D03.b : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTTCTGCACTG
TCH01_0018_B12.b : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGCAACTG
CLNT1_0073_F05.b : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGCAACTG
CLNT1_0047_H12.b : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGCAACTG
TCH01_0024_G02.b : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGCAACTG
LNG01_0001_C06.b : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGCAACTG
LNG01_0041_C03.b : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGCAACTG
UTR01_0068_B04.b : CCCTCCTCCCTACTGCTACCCCTTAGCTGTCCTAACCCAGCCAGAAAGTTTCTGCAACTG
20110601C-008896 : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAGGGTGGGGAGTTGGAGGGACCA
---------+---------+---------+---------+---------+---------+ 820
TCH01_0060_C02.b : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAGGGTGGGGAGTTGGAGGGACCA
SPL01_0081_H09.b : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAGGGTGGGGAGTTGGAGGGACCA
PBL01_0047_D03.b : AGAAGAGCAAACCCTGNAGAGAGAGAAAGAGAATGAAAGGNTGGGGAGTTGGAGGGACCC
TCH01_0018_B12.b : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAGGGTGGGGAGTTGGAGGGGACA
CLNT1_0073_F05.b : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAGGGTGGGGAGTTGGAGGGACCA
CLNT1_0047_H12.b : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAGGGTGGGGAGTTGGAGGGACCA
TCH01_0024_G02.b : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAAGGTGGGGAGTTGGAGGGACCA
LNG01_0001_C06.b : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAGGGTGGGGAGTTGGAGGGACCA
LNG01_0041_C03.b : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAGGGTGGGGAGTTGGAGGGACCA
UTR01_0068_B04.b : AGAAGAGCAAACCCTGGAGAGAGAGAAAGAGAATGAAAGGGTGGGGAGTTGGAGGGACCA
20110601C-008896 : GGAGCAGAGGCAGGGAGAGCAGGGCCTGAAAGCACTTCTACAGTGACGCCAGAATACAAA
---------+---------+---------+---------+---------+---------+ 880
TCH01_0060_C02.b : GGAGCAGAGGCAGGGAGAGCAGGGCCTGAAAGCACTTCTACAGTGACGCCAGAATACAAA
SPL01_0081_H09.b : Gnacccgaggcaggagagcagggcccgaagcacttctacagtgacgcagaatacaaagta
PBL01_0047_D03.b : AGAGCAGA*GCAGGGAGA*CAGGGCCCTGAAGCACTTCTACAGTGACGCCAGAAatacaa
TCH01_0018_B12.b : *GAGCCGAAGCAGGGAGAGCAGGGCCTGAAAGCACTTCacagtgacgccagatacaagta
CLNT1_0073_F05.b : GGAGCAGAAGCAGGGAGAGCAGGGCCCTGAAGCACTTCTACAGTGACGCCAGAATACNAA
CLNT1_0047_H12.b : GGAGCAGAAGCAGGGAGAGCAGGNCCTGAAAGCACTTCTACAGTGACGCCGGAATACAAA
TCH01_0024_G02.b : GGAGCAGAAGCAGGGAGAGCAGGGCCTGAAAGCACTTCTACAGTGACGCCAGAATACAAA
LNG01_0001_C06.b : GGAGCAGAGGCAGGGAGAGCAGGGCCTGAAAGCACTTCTACAGTGACGCCAGAATACAAA
LNG01_0041_C03.b : GGAGCAGAGGCAGGGAGAGCAGGGCCCTGAAGCACTTCTACAGTGACCCCAGAATACAAA
UTR01_0068_B04.b : GGAGCAGAGGCAGGGAGAGCAGGGCCTGAAAGCACTTCTACAGTGACGCCAGAATACAAA
20110601C-008896 : GTAAGATATGTGGTCACCAGTCACATGACCGAGAGCTGGAGTCGGGGACATGCAGCCCAA
---------+---------+---------+---------+---------+---------+ 940
TCH01_0060_C02.b : GTAAGATATGTGGTCACCAGTCACATGACccagagctggagtcggggactgccaccccaa
SPL01_0081_H09.b : agatttgtggtcccagtcccttgaccgaaagctggagtcgggacatgccgcccaaaccca
PBL01_0047_D03.b : gtagatatgtggtcacagtccatgaccgaaagctggagtcggggactgcagccaaacaca
TCH01_0018_B12.b : aaaatgtggtcacagtcactgaccagagctggatcgggactgcacccaacacacaagacc
CLNT1_0073_F05.b : GTAgatatgtggtcccaatcacatgacccanagctggattcggggaatgcagcccaaaca
CLNT1_0047_H12.b : GTAAGATATGTGGTCACCAGTCACATGACccagagctggagtcggggaatgcagcccaaa
TCH01_0024_G02.b : GTAAGATATGTGGTCACCAGCCACATGACCGAGAGCTGGAGTCGGGGACATGCAGCCCAA
LNG01_0001_C06.b : GTAAGATATGTGGTCACCAGTCACATGACCCAGAGCTGGAGTCGGGGACATGCAGCCCAA
LNG01_0041_C03.b : GTAAGATATGTGGgtccccgttccatgaccgagagctggagtcggggacttgcagcccaa
UTR01_0068_B04.b : GTAAGATATGTGGTCACAAGTCACATGACCGAGAGCTGGAGTCGGGGACATGCAGCCCCA
20110601C-008896 : ACACCACAAAGACCCACTGCATTTTTTCACTTTCCATCTAGTGTTTTGAAA.........
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b : ccccacaagacccactggcttttttcccttttcatctaatgttttggaatccaaacctag
SPL01_0081_H09.b : caaagacccactgcctttttcccttccctctagtggtttggaatcaaaactaaacttaag
PBL01_0047_D03.b : caaagaccactgcatttttcctttcatctatgtttgaaatcaactagactgagattcaga
TCH01_0018_B12.b : actgctttttcacttcctcatgttgaatcagactaaactgaatcaaaagttcgaaaaagc
CLNT1_0073_F05.b : ccacaaggacccactgcttttttccctttcatctagggtttggaatcaagcttagacttg
CLNT1_0047_H12.b : caccacaaagaccactgcattttttccctttcatctaatgtttgaaatcgaaactagact
TCH01_0024_G02.b : ACA*CACAAAGACCCACTGCATTTTttcacttccatctantgttttggaatcgagactta
LNG01_0001_C06.b : ACACCACAAAGACCCACTGCATTTTTTTACTTTtcctcttattgttttgaaatcgaaaac
LNG01_0041_C03.b : acccccccaaagacccactgcttttttttccttttccttctagtggtttttaaattcaaa
UTR01_0068_B04.b : AACCCCACAAGACCCACTGCATTTTTTCACTTTCCATCTAGTGTTTTGAAAttccagact
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b : actttgagatccaagaacgttcccgaaagaaagccaaggggacggaacaaattgggctac
SPL01_0081_H09.b : a
PBL01_0047_D03.b : cgtacagaagaagcaggacaggacgatggctactantggatgacgaaaaaaaaaaaaggc
TCH01_0018_B12.b : aggacggaacagttctactatgaatgagaaaaaaaaaaagcctgggctatgatgcggccc
CLNT1_0073_F05.b : aaataaagaccgtcaggaaagaagccaggggcggacaaattgctcctagtgggatgacga
CLNT1_0047_H12.b : tgagatcaagacagtacgggaagaaggccaggcaccggacaaatgtgcttcctggtggaa
TCH01_0024_G02.b : gacttggagatcaaagaccgtacaggaaaaaaagcaggggaccggaacaaatgtgcttac
LNG01_0001_C06.b : ctaaactttgaaaatcaaaaaacaggtaccgggaaaaaaaagcaaaggggacggggaaca
LNG01_0041_C03.b : actttaaattttgaaaatcaaaaaacaggtccgggaaaaaaaaacaaggggaacgggaaa
UTR01_0068_B04.b : tagactttgaagattcaagaacagtacagggaaaaaaaagccagggaacaggaacaaatg
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b : ttagtgggaatggcggaaaaaaaaaaaaaaaaagggccctggggctcaaactgcaggtcc
SPL01_0081_H09.b :
PBL01_0047_D03.b : catggctcactgagtccgcccttaagatcctgagggcaactaactacagttctgaaaggt
TCH01_0018_B12.b : ctgttccccgggccactaccaccttttgaaaaggccatggacatataagcggcttttacc
CLNT1_0073_F05.b : aaaaaaaaaaaaagccccttgttcaactgaggtccggccttaatttctaagaaaaccccc
CLNT1_0047_H12.b : tgcccgaaaaaaaaaaaaaagggccattggtctcaactgcaggctcgggccctaactttt
TCH01_0024_G02.b : taattgagatggccgcaaaaaaaaaaaaaaaaggcccctgggc
LNG01_0001_C06.b : agatgttgctttaccaaagtggaaaaatggaaaaaaaaaaaaaaaaaaaaaaaagggccc
LNG01_0041_C03.b : ccaaatttggcttttcttaatttgaaaaatggcaaaaaaaaaaaaaaaaaaaaaaaaaaa
UTR01_0068_B04.b : gtgcttacttagttgaaaatggacaaaaaaaaaaaaaaaaaaaagggccccctg
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b : cggccgctcttaagtttccccttcggggggccagg
SPL01_0081_H09.b :
PBL01_0047_D03.b : ctaagggacataaacagcctgccccttaacctgacggaaccactgaatttaagacttttg
TCH01_0018_B12.b : cggggaaacctggttttaacctctgggatggaccccatacccgaaattagagggcccctg
CLNT1_0073_F05.b : cacttccccgaccgaaataaggaacattgggtgttaatttttggccctaaggtcaaaaag
CLNT1_0047_H12.b : ctaaaaaaaaacctccacactcccctgaacggaaacaaaaagaaagcattttgtgtttac
TCH01_0024_G02.b :
LNG01_0001_C06.b : cccatggtggcctcccaaacctttgccgggggttcccccgggccccccccccttctttaa
LNG01_0041_C03.b : ggggccccccttgtggggctctccagcccctggcgggggtcccgggggggccccccctcc
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b : gggacttgaaacccattaccggaaaatttggaggttaccccccgctatttcgattaaata
TCH01_0018_B12.b : tggttgaataaaaaagttttttcgtcccccttcccttttcccccaatgtttnaaaatttt
CLNT1_0073_F05.b : aaaaccccaattcaaaaaattttttcgcctcttggggtccacccaaggttattggggccc
CLNT1_0047_H12.b : tgttttttggccctaaggggtcaaaaaaaaaaaccccacatttccaaaagagtttttttc
TCH01_0024_G02.b :
LNG01_0001_C06.b : aaaagaat
LNG01_0041_C03.b : ttttaaaaaaattatttccccccccctccgggagggggggggggcgcccccccaaaa
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b : ccggtttgtttttacgtggcccccgttccccttttttccccccaaggggtttaaaaaaat
TCH01_0018_B12.b : ttaggacccgtctcgtgaagaggannnnnnnnnnnnnnnnnnnnnnnnnnnnnncgcggt
CLNT1_0073_F05.b : ggcggaaaatttctccctccccaaaacgcggggtgggggggggctctctgggttttccat
CLNT1_0047_H12.b : ggcgcccatgggggg
TCH01_0024_G02.b :
LNG01_0001_C06.b :
LNG01_0041_C03.b :
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b : gttgttatgaggctgtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
TCH01_0018_B12.b : tccgccatgctactctgtctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
CLNT1_0073_F05.b : gggagagaaggtgaggc
CLNT1_0047_H12.b :
TCH01_0024_G02.b :
LNG01_0001_C06.b :
LNG01_0041_C03.b :
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
TCH01_0018_B12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
CLNT1_0073_F05.b :
CLNT1_0047_H12.b :
TCH01_0024_G02.b :
LNG01_0001_C06.b :
LNG01_0041_C03.b :
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b :
TCH01_0018_B12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
CLNT1_0073_F05.b :
CLNT1_0047_H12.b :
TCH01_0024_G02.b :
LNG01_0001_C06.b :
LNG01_0041_C03.b :
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b :
TCH01_0018_B12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
CLNT1_0073_F05.b :
CLNT1_0047_H12.b :
TCH01_0024_G02.b :
LNG01_0001_C06.b :
LNG01_0041_C03.b :
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b :
TCH01_0018_B12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
CLNT1_0073_F05.b :
CLNT1_0047_H12.b :
TCH01_0024_G02.b :
LNG01_0001_C06.b :
LNG01_0041_C03.b :
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b :
TCH01_0018_B12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
CLNT1_0073_F05.b :
CLNT1_0047_H12.b :
TCH01_0024_G02.b :
LNG01_0001_C06.b :
LNG01_0041_C03.b :
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b :
TCH01_0018_B12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
CLNT1_0073_F05.b :
CLNT1_0047_H12.b :
TCH01_0024_G02.b :
LNG01_0001_C06.b :
LNG01_0041_C03.b :
UTR01_0068_B04.b :
20110601C-008896 : ............................................................
---------+---------+---------+---------+---------+---------+ 991
TCH01_0060_C02.b :
SPL01_0081_H09.b :
PBL01_0047_D03.b :
TCH01_0018_B12.b : nnnnn
CLNT1_0073_F05.b :
CLNT1_0047_H12.b :
TCH01_0024_G02.b :
LNG01_0001_C06.b :
LNG01_0041_C03.b :
UTR01_0068_B04.b :