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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-009201

Length: 1,416

Sequence [FASTA format sequence]
GTCGCGCTCG GGGGGCGGCA GTGGGACCTG CTGCGGCCGG ATCTGCGCCT GGGCTCGGCG
GAGCTGCGGC GGCAGAGCCA GCGTGATGGA CGCTCTCTCT GAAGCAAACG GCACCTTCGC
CCTCCGCCTT TTAAAGATAC TGTGCCAAGA TGACCCGTCA CACAACGTGT TTTATTCTCC
TGTGAGCATC TCCTCTGCCC TGGCCATGGT CCTCCTGGGG GCAAAAGGAG ACACCGCTGC
CCAGCTGGCC CAGGTGCTTT CTTTAAACAC AGAGAAAGAC ATTCACCAGG ATTTCCAGGC
ACTTCTTGCC GAGCTGAACA AACCCAGCAC TCGGTACTTG CTCAGAACGG CCAACAAGCT
CTTTGGGGAG AAGTCTCGTG AATTTCTCTC TACCTTCAAG GAATCCTGTC TTCGGTTCTA
TGATGCGGAG CTGGAGCAGC TCTCCTTCGC CAGCGCCGCA GAGGCATCCA GAAAGCAGAT
AAACGCTTGG GTCTCTAAAA AGACAGAAGG TAAAATTCCA GAGGTGCTGC CATGGAACTC
AATTGATGAG CAGACCAGGC TGGTTCTTGT CAATGCCGTC TACTTCAAAG GAAGGTGGGA
CCAGCAATTT GACAAAAAGT ACACGAGGGA GATGCCTTTT AGGGTAAACC AGAAGGAGCA
GAGGCCGGTG CAGATGATGT TTCAGGAGGC AACGTTCAGA CTCGGGCGCG TGGAGGAGGT
GCCGGCCCAG GTCCTGGAGC TGCCCTACGA GGACCGGGAG CTGAGCATGG TCGTCCTGCT
CCCCGACGAC CACGTGGCTC TGAGCGAGGT GGAGAGACAG CTCACCTTTG AGAAACTCCT
GGCCTGGACG AAGCCGGAAC GCATGCAGAG CCTCGACGTG GAAGTTTTCC TCCCGAGGTT
TAAGCTGGAC GCGAGTTACG ACCTGGAGTT GCTGCTCGGG CATTTGGGGG TGGTGGACGC
CTTCCAGCAG GGCAAGGCCG ACTTCTCGGC CATGGCCCCC GAGCGGGACC TGAGCCTGTC
CACCTTCGTG CACAAGAGTG TGGTGGAGGT GAACGAGGAA GGCTCGGAGG CGGCGGCGGC
CTCGGCCCTG GTGCTGATGG AGTGCTGCAT GGAGTCCGGG CCCAGGTTCT GCGCCGACCA
CCCCTTCCTC TTCTTCATCA GGCACAACAA GGCCAAGAGC ATCCTCTTCT GTGGCAGGTT
TTCCTCCCCG TGAGCGGTGC ACCCGCCTCG CGCGGGAGCC TGTCCCCTTC TGCGGCCCTG
AGTCCCCCCA CCAAGCCCCA AAGGTGGCCA GGCAGACNGC CACCCGCTCC ACGCGCCTTT
CCCAGGCGGA CCACTCATCC ACGCCCCTCA GTCCAGACCG CAGGCCTGCA GGCTCTAAGG
ATGCCCTGGG GCATTTAAGA CGCAGCCCGG ATCCCA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSERPINB9serpin B9 [Homo sapiens]. 531e-151O
Contig/Assembly ProteinSERPINB8serpin B8 isoform a [Homo sapiens]. 426e-119O
Contig/Assembly ProteinSERPINB8serpin B8 isoform a [Homo sapiens]. 426e-119O
Contig/Assembly ProteinSERPINB6serpin B6 [Homo sapiens]. 417e-116O
Contig/Assembly ProteinSERPINB6serpin B6 [Homo sapiens]. 417e-116O
Contig/Assembly ProteinSERPINB1leukocyte elastase inhibitor [Homo sapiens]. 3485e-96O
Contig/Assembly ProteinSERPINB10serpin B10 [Homo sapiens]. 3088e-84O
Contig/Assembly ProteinSERPINB4serpin B4 [Homo sapiens]. 2994e-81O
Contig/Assembly ProteinSERPINB8serpin B8 isoform b [Homo sapiens]. 2963e-80O
Contig/Assembly ProteinSERPINB2plasminogen activator inhibitor 2 precursor [Homo sapiens]. 2932e-79O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSerpinb9serine (or cysteine) proteinase inhibitor, clade B, member 9 [Mus musculus]. 459e-129O
Contig/Assembly ProteinSerpinb9dserine (or cysteine) proteinase inhibitor, clade B, member 9d [Mus musculus]. 431e-121O
Contig/Assembly ProteinSerpinb9bserine (or cysteine) proteinase inhibitor, clade B, member 9b [Mus musculus]. 428e-120O
Contig/Assembly ProteinSerpinb9eserine (or cysteine) proteinase inhibitor, clade B, member 9e [Mus musculus]. 425e-119O
Contig/Assembly ProteinSerpinb8serpin B8 isoform 1 [Mus musculus]. 420e-117O
Contig/Assembly ProteinSerpinb9fserine (or cysteine) proteinase inhibitor, clade B, member 9f [Mus musculus]. 418e-117O
Contig/Assembly ProteinSerpinb9cserine (or cysteine) proteinase inhibitor, clade B, member 9c isoform 1 [Mus musculus]. 415e-116O
Contig/Assembly ProteinGm11397PREDICTED: serpin B9 [Mus musculus]. 415e-116
Contig/Assembly ProteinSerpinb9gserine (or cysteine) proteinase inhibitor, clade B, member 9g [Mus musculus]. 414e-116O
Contig/Assembly ProteinSerpinb6aserpin B6 isoform a [Mus musculus]. 413e-115O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC488192PREDICTED: similar to Cytoplasmic antiproteinase 3 (CAP3) (CAP-3) (Protease inhibitor 9) (Serpin B9) isoform 1 [Canis familiaris]. 526e-149O
Contig/Assembly ProteinLOC488192PREDICTED: similar to Cytoplasmic antiproteinase 3 (CAP3) (CAP-3) (Protease inhibitor 9) (Serpin B9) isoform 4 [Canis familiaris]. 525e-149O
Contig/Assembly ProteinLOC488192PREDICTED: similar to Cytoplasmic antiproteinase 3 (CAP3) (CAP-3) (Protease inhibitor 9) (Serpin B9) isoform 5 [Canis familiaris]. 521e-148O
Contig/Assembly ProteinLOC488192PREDICTED: similar to Cytoplasmic antiproteinase 3 (CAP3) (CAP-3) (Protease inhibitor 9) (Serpin B9) isoform 2 [Canis familiaris]. 520e-147O
Contig/Assembly ProteinLOC488192PREDICTED: similar to Cytoplasmic antiproteinase 3 (CAP3) (CAP-3) (Protease inhibitor 9) (Serpin B9) isoform 3 [Canis familiaris]. 519e-147O
Contig/Assembly ProteinLOC607205PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 8 isoform a isoform 1 [Canis familiaris]. 420e-117O
Contig/Assembly ProteinLOC607205PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 8 isoform a isoform 4 [Canis familiaris]. 419e-117O
Contig/Assembly ProteinLOC607205PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 8 isoform a isoform 2 [Canis familiaris]. 417e-116O
Contig/Assembly ProteinLOC607205PREDICTED: similar to serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 8 isoform a isoform 3 [Canis familiaris]. 416e-116O
Contig/Assembly ProteinLOC478699PREDICTED: similar to Placental thrombin inhibitor (Cytoplasmic antiproteinase) (CAP) (Protease inhibitor 6) (PI-6) (Serpin B6) isoform 2 [Canis familiaris]. 400e-111O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSERPINB9serpin B9 [Bos taurus]. 495e-140O
Contig/Assembly ProteinSERPINB8serpin B8 [Bos taurus]. 420e-117O
Contig/Assembly ProteinSERPINB6serpin B6 [Bos taurus]. 416e-116O
Contig/Assembly ProteinLOC617406PREDICTED: similar to thrombin inhibitor [Bos taurus]. 408e-114O
Contig/Assembly ProteinSERPINB6PREDICTED: serpin peptidase inhibitor, clade B (ovalbumin), member 6 [Bos taurus]. 406e-113O
Contig/Assembly ProteinLOC782894PREDICTED: serpin B6-like [Bos taurus]. 384e-106O
Contig/Assembly ProteinLOC782894PREDICTED: serpin B6-like [Bos taurus]. 384e-106O
Contig/Assembly ProteinLOC617396PREDICTED: serpin B6-like isoform 2 [Bos taurus]. 3502e-96O
Contig/Assembly ProteinLOC617396PREDICTED: serpin B6-like [Bos taurus]. 3493e-96O
Contig/Assembly ProteinSERPINB1leukocyte elastase inhibitor [Bos taurus]. 3326e-91O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSERPINB9serpin B9 [Sus scrofa]. 7010.0O
Contig/Assembly ProteinSERPINB8PREDICTED: serpin B8 [Sus scrofa]. 425e-119O
Contig/Assembly ProteinSERPINB10PREDICTED: serpin B10 [Sus scrofa]. 3062e-83O
Contig/Assembly ProteinSERPINB2PREDICTED: plasminogen activator inhibitor 2 [Sus scrofa]. 2854e-77O
Contig/Assembly ProteinLOC100156623PREDICTED: serpin B11-like [Sus scrofa]. 2787e-75O
Contig/Assembly ProteinSERPINB5PREDICTED: serpin B5 [Sus scrofa]. 2732e-73O
Contig/Assembly ProteinLOC100153783PREDICTED: ovalbumin [Sus scrofa]. 2432e-64O
Contig/Assembly ProteinSERPINB7PREDICTED: serpin B7 isoform 2 [Sus scrofa]. 2285e-60O
Contig/Assembly ProteinSERPINB7PREDICTED: serpin B7 isoform 1 [Sus scrofa]. 2285e-60O
Contig/Assembly ProteinSERPINB1PREDICTED: leukocyte elastase inhibitor, partial [Sus scrofa]. 2062e-53O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ILNT10005G06ILNT1_0005_G06.bHX227130 
LNG010081F02LNG01_0081_F02.bBP438092 
LVRM10016F07LVRM1_0016_F07.bBP452575 
LVRM10175D05LVRM1_0175_D05.bCJ005049 AK346430
OVRM10149G02OVRM1_0149_G02.bBP460497 
PBL010010A05PBL01_0010_A05.bBW969076 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
421C200.500BSTAC/Y
T020.500TAT/Y


Alignment:      TOP

20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0016_F07.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0175_D05.b : ncgttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0149_G02.b : taattgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0005_G06.b : nnnaagcggtagaxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0010_A05.b : nngggttattanggatatacaxxxxxxxxxxxxx
LNG01_0081_F02.b :
20110601C-009201 : .GTCGCGCTCGGGGGGCGGCAGTGGGACCTGCTGCGGCCGGATCTGCGCCTGGGCTCGGC
---------+---------+---------+---------+---------+---------+ 59
LVRM1_0016_F07.b : xGTCGCGCTCGGGGGGCGGCAGTGGGACCTGCTGCGGCCGGATCTGCGCCTGGGCTCGGC
LVRM1_0175_D05.b : xxxxxxxxxxxxxxxxxxxxxGTGGGACCCGCTGCGGCCGGATCTGCGCCTGGGCTCGGC
OVRM1_0149_G02.b : xxxxxxxxxxxxxxxxxxxxxGTGGGACCTGCTGCGGCCGGATCTGCGCCTGGGCTCGGC
ILNT1_0005_G06.b : xxxxxxxxxxxxxxxxxxxxgGTGGGACCTGCTGCGGCCGGATCTGCGCCTGGGCTCGGC
PBL01_0010_A05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxCTGCTGCGGCCGGATCTGCGCCTGGGCTCGGC
LNG01_0081_F02.b :
20110601C-009201 : GGAGCTGCGGCGGCAGAGCCAGCGTGATGGACGCTCTCTCTGAAGCAAACGGCACCTTCG
---------+---------+---------+---------+---------+---------+ 119
LVRM1_0016_F07.b : GGAGCTGCGGCGGCAGAGCCAGCGTGATGGACGCTCTCTCTGAAGCAAACGGCACCTTCG
LVRM1_0175_D05.b : GGAGCTGCGGCGGCAGAGCCAGCGTGATGGACGCTCTCTCTGAAGCAAACGGCACCTTCG
OVRM1_0149_G02.b : GGAGCTGCGGCGGCAGAGCCAGCGTGATGGACGCTCTCTCTGAAGCAAACGGCACCTTCG
ILNT1_0005_G06.b : GGAGCTGCGGCGGCAGAGCCAGCGTGATGGACGCTCTCTCTGAAGCAAACGGCACCTTCG
PBL01_0010_A05.b : GGAGCTGCGGCGGCAGAGCCAGCGTGATGGACGCTCTCTCTGAAGCAAACGGCACCTTCG
LNG01_0081_F02.b :
20110601C-009201 : CCCTCCGCCTTTTAAAGATACTGTGCCAAGATGACCCGTCACACAACGTGTTTTATTCTC
---------+---------+---------+---------+---------+---------+ 179
LVRM1_0016_F07.b : CCCTCCGCCTTTTAAAGATACTGTGCCAAGATGACCCGTCACACAACGTGTTTTATTCTC
LVRM1_0175_D05.b : CCCTCCGCCTTTTAAAGATACTGTGCCAAGATGACCCGTCACACAACGTGTTTTATTCTC
OVRM1_0149_G02.b : CCCTCCGCCTTTTAAAGATACTGTGCCAAGATGACCCGTCACACAACGTGTTTTATTCTC
ILNT1_0005_G06.b : CCCTCCGCCTTTTAAAGATACTGTGCCAAGATGACCCGTCACACAACGTGTTTTATTCTC
PBL01_0010_A05.b : CCCTCCGCCTTTTAAAGATACTGTGCCAAGATGACCCGTCACACAACGTGTTTTATTCTC
LNG01_0081_F02.b :
20110601C-009201 : CTGTGAGCATCTCCTCTGCCCTGGCCATGGTCCTCCTGGGGGCAAAAGGAGACACCGCTG
---------+---------+---------+---------+---------+---------+ 239
LVRM1_0016_F07.b : CTGTGAGCATCTCCTCTGCCCTGGCCATGGTCCTCCTGGGGGCAAAAGGAGACACCGCTG
LVRM1_0175_D05.b : CTGTGAGCATCTCCTCTGCCCTGGCCATGGTCCTCCTGGGGGCAAAAGGAGACACCGCTG
OVRM1_0149_G02.b : CTGTGAGCATCTCCTCTGCCCTGGCCATGGTCCTCCTGGGGGCAAAAGGAGACACCGCTG
ILNT1_0005_G06.b : CTGTGAGCATCTCCTCTGCCCTGGCCATGGTCCTCCTGGGGGCAAAAGGAGACACCGCTG
PBL01_0010_A05.b : CTGTGAGCATCTCCTCTGCCCTGGCCATGGTCCTCCTGGGGGCAAAAGGAGACACCGCTG
LNG01_0081_F02.b :
20110601C-009201 : CCCAGCTGGCCCAGGTGCTTTCTTTAAACACAGAGAAAGACATTCACCAGGATTTCCAGG
---------+---------+---------+---------+---------+---------+ 299
LVRM1_0016_F07.b : CCCAGCTGGCCCAGGTGCTTTCTTTAAACACAGAGAAAGACATTCACCAGGATTTCCAGG
LVRM1_0175_D05.b : CCCAGCTGGCCCAGGTGCTTTCTTTAAACACAGAGAAAGACATTCACCAGGATTTCCAGG
OVRM1_0149_G02.b : CCCAGCTGGCCCAGGTGCTTCCTTTAAACACAGAGAAAGACATTCACCAGGATTTCCAGG
ILNT1_0005_G06.b : CCCAGCTGGCCCAGGTGCTTTCTTTAAACACAGAGAAAGACATTCACCAGGATTTCCAGG
PBL01_0010_A05.b : CCCAGCTGGCCCAGGTGCTTTCTTTAAACACAGAGAAAGACATTCACCAGGATTTCCAGG
LNG01_0081_F02.b :
20110601C-009201 : CACTTCTTGCCGAGCTGAACAAACCCA*GCACTCGGTACTTGCTCAGAACGGCCAACAAG
---------+---------+---------+---------+---------+---------+ 358
LVRM1_0016_F07.b : CACTTCTTGCCGAGCTGAACAAACCCA*GCACTCGGTACTTGCTCAGAACGGCCAACAAG
LVRM1_0175_D05.b : CACTTCTTGCCGAGCTGAACAAACCCAGGCACTCGGTACTTGCTCAGAACGGCCAACAAG
OVRM1_0149_G02.b : CACTTCTTGCCGAGCTGAACAAACCCA*GCACTCGGTACTTGCTCAGAACGGCCAACAAG
ILNT1_0005_G06.b : CACTTCTTGCCGAGCTGAACAAACCCA*GCACTCGGTACTTGCTCAGAACGGCCAACAAG
PBL01_0010_A05.b : CACTTCTTGCCGAGCTGAACAAACCCA*GCACTCGGTACTTGCTCAGAACGGCCAACAAG
LNG01_0081_F02.b :
20110601C-009201 : CTCTTTGGGGAGAAGTCTCGTGAATTTCTCTCTACCTTCAAGGAATCCTGTCTTCGGTTC
---------+---------+---------+---------+---------+---------+ 418
LVRM1_0016_F07.b : CTCTTTGGGGAGAAGTCTCGTGAATTTCTCTCTACCTTCAAGGAATCCTGTCTTCGGTTC
LVRM1_0175_D05.b : CTCTTTGGGGAGAAGTCTCGTGGATTTCGCTCCACGTTCAAagaaagcctgtcttccgtt
OVRM1_0149_G02.b : CTCTTTGGGGAGAAGTCTCGTGAATTTCTCTCTACCTTCAAGGAATCCTGTCTTCGGTTC
ILNT1_0005_G06.b : CTCTTTGGGGAGAAGTCTCGTGAATTTCTCTCTACCTTCAAGGAATCCTGTCTTCGGTTC
PBL01_0010_A05.b : CTCTTTGGGGAGAAGTCTCGTGAATTTCTCTCTACCTTCAAGGAATCCTGTCTTCGGTTC
LNG01_0081_F02.b :
20110601C-009201 : TATGATGCGGAGCTGGAGCAGCTCTCCTTCGCCAGCGCCGCAGAGGCATCCAGAAAGCAG
---------+---------+---------+---------+---------+---------+ 478
LVRM1_0016_F07.b : TATGATGCGGAGCTGGAGCAGCTCTCCTTCGCCAGCGCCGCAGAGGCATCCAGAAAGCAG
LVRM1_0175_D05.b : ccaagaggcggcactagagagagctgtccttatccaacagccccgtaagacccccgcaac
OVRM1_0149_G02.b : TATGATGCGGAGCTGGAGCAGCTCTCCTTCGCCAGCGCCGCAGAGGCATCCAGAAAGCAG
ILNT1_0005_G06.b : TACGATGCGGAGCTGGAGCAGCTCTCCTTCGCCAGCGCTGCAGAGGCATCCAGAAAGCAG
PBL01_0010_A05.b : TACGATGCGGAGCTGGAGCAGCTCTCCTTCGCCAGCGCCGCAGAGGCATCCAGAAAGCAG
LNG01_0081_F02.b : nnnnnggctg
20110601C-009201 : ATAAACGCTTGGGTCTCTAAAAAGACAGAAGGTAAAATTCCAGAGGTGCTGCCATGGAAC
---------+---------+---------+---------+---------+---------+ 538
LVRM1_0016_F07.b : ATAAACGCTTGGGTCTCTAAAAAGACAGAAGGTAAAATTCCAGAGGTGCTGCCACGGAAC
LVRM1_0175_D05.b : cgacacagaccgcctgcctgtcctgaagcatatcacccggctattctccaatagtcagag
OVRM1_0149_G02.b : ATAAACGCTTGGGTCTCTAAAAAGACAGAAGGTAAAATTCCAGAGGTGCTGCCACGGAAC
ILNT1_0005_G06.b : ATAAACGCTTGGGTCTCTAAAAAGACAGAAGGTAAAATTCCAGAGGTGCTGCCATGGAAC
PBL01_0010_A05.b : ATAAACGCTTGGGTCTCTAAAAAGACAGAAGGTAAAATTCCAGAGGTGCTGCCACGGAAC
LNG01_0081_F02.b : gacttgacagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-009201 : TCAATTGATGAGCAGACCAGGCTGGTTCTTGTCAATGCCGTCTACTTCAAAGGAAGGTGG
---------+---------+---------+---------+---------+---------+ 598
LVRM1_0016_F07.b : TCAATTGATGAGCACACCAGGCTGGTTCTTGTCAATGCCGTCTACTTCAAAGGAAGGTGG
LVRM1_0175_D05.b : taatccgcaagggactcgatgcggaggccagacaaatgataaatgtactaacccatgcca
OVRM1_0149_G02.b : TCAATTGATGAGCAGACCAGGCTGGTTCTTGTCAATGCCGTCTACTTCAAAGGAAGGTGG
ILNT1_0005_G06.b : TCAATTGATGAGCAGACCAGGCTGGTTCTTGTCAATGCCGTCTACTTCAAAGGAAGGTGG
PBL01_0010_A05.b : TCAATTGATGAGCAGACCAGGCTGGTTCTCGTCAACGCTGTCTACTTCAAAGGAAGGTGG
LNG01_0081_F02.b : xxxxxxxATGAGCAGACCAGGCTGGTTCTTGTCAATGCCGTCTACTTCAAAGGAAGGTGG
20110601C-009201 : GACCAGCAATTTGACAAAAAGTACACGAGGGAGATGCCTTTTAGGGTAAACCAGAAGGAG
---------+---------+---------+---------+---------+---------+ 658
LVRM1_0016_F07.b : GACCAGCAATTTGACAAAAAGTA*ACCAGAGAGATGCCTTTTAGGGT*AACCAGAAGGAA
LVRM1_0175_D05.b : ttacaagtagacgtggagaagttcaagcctccaaggctggacgacggtacatatactcgt
OVRM1_0149_G02.b : GACCAGCAATTTGACAAAAAGTACACGAGAGAGATGCCTTTTAGGGTAAACCAGAAGGAG
ILNT1_0005_G06.b : GACCAGCAATTTGACAAAAAGTACACGAGGGAGATGCCTTTTAGGGTAAACCAGAAGGAG
PBL01_0010_A05.b : GACCAGCAATTTGACAAAAAGTACACGAGGGAGATGCCTTTTANGGGTAACCAGAAGGAG
LNG01_0081_F02.b : GACCAGCAATTTGACAAAAAGTACACGAGGGAGATGCCTTTTAGGGTAAACCAGAAGGAG
20110601C-009201 : CAGAGGCCGGTGCAGATGATGTTTCAGGAGGCAACGTTCAGACTCGGGCGCGTGGAGGAG
---------+---------+---------+---------+---------+---------+ 718
LVRM1_0016_F07.b : CACAGGCCGGTGCAGATGATGTTTCAAGAGGCAACttctgattcgggccgtgagagactt
LVRM1_0175_D05.b : ccaagtctagcccaggtgatcaaggtaatgccgtatggagttagacaaaaaccgttgcat
OVRM1_0149_G02.b : CAGAGGCCGGTGCAGATGATGTTTCAGGAGGCAACGTTCAGACTCGGGCGCGTGGAAGAG
ILNT1_0005_G06.b : CAGAGGCCGGTGCAGATGATGTTTCAGGAGGCAACGTTCAGACTCGGGCGCGTGGAGGAG
PBL01_0010_A05.b : CAGAGGCCGGTGCAGATGATGTTTCAGGANGCCACGTTCAAACTCGGGCGCGTGGAGGAA
LNG01_0081_F02.b : CAGAGGCCGGTGCAGATGATGTTTCAGGAGGCAACGTTCAGACTCGGGCGCGTGGAGGAG
20110601C-009201 : GTGCCGGCCCAGGTCCTGGAGCTGCCCTACGAGGACCGGGAGCTGAGCATGGTCGTCCTG
---------+---------+---------+---------+---------+---------+ 778
LVRM1_0016_F07.b : ggtagtccattcctggagcttgcctataaagacggtgaattacaacgtc
LVRM1_0175_D05.b : cctatactcctgggtagatggtcagcccactcgagacctaagtttacgacggtaaaggtt
OVRM1_0149_G02.b : GTGCCCGGCCCAGTCCTGGAGCTGCCCTACGAGGACt
ILNT1_0005_G06.b : GTGCCGGCCCAGGTCCTGGAGCTGCCCTACGAGGACCGGGAGCTGAGCATGGTCGTCCTG
PBL01_0010_A05.b : NGTGCCGGCCANGTCCTGGAGCTGCCCTACaaggaccaggagctgagcatggtcgtccgg
LNG01_0081_F02.b : GTGCCGGCCCAGGTCCTGGAGCTGCCCTACGAGGACCGGGAGCTGAGCATGGTCGTCCTG
20110601C-009201 : CTCCCCGACGACCACGTGGCTCTGAGCGAGGTGGAGAGACAGCTCACCTTTGAGAAACTC
---------+---------+---------+---------+---------+---------+ 838
LVRM1_0016_F07.b :
LVRM1_0175_D05.b : gacc
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : CTCCCCGACGACCACGTGGCTCTGAGCGAGGTGGAGAGAAAGCTCACCTTTGAaaactcc
PBL01_0010_A05.b : ctccccgacaaccacgtggctctgaacgagggtgaagagacagctcaccttgtaaaaact
LNG01_0081_F02.b : CTCCCCGACGACCACGTGGCTCTGAGCGAGGTGGAGAGACAGCTCACCTTTGAGAAACTC
20110601C-009201 : CTGGCCTGGACGAAGCCGGAACGCATGCAGAGCCTCGACGTGGAAGTTTTCCTCCCGAGG
---------+---------+---------+---------+---------+---------+ 898
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : tggcctggacgaacccgaacgcatgcaaagctcgacgtggaattttcctcccgaggttta
PBL01_0010_A05.b : cctggcctgaacaaacccggaaccctgccaaacctccacgggaagatttttctcccgaag
LNG01_0081_F02.b : CTGGCCTGGACGAAGCCGGAACGCATGCAGAGCCTCGACGTGGAAGTTTTCCTCCCGAGG
20110601C-009201 : TTTAAGCTGGACGCGAGTTACGACCTGGAGTTGCTGCTCGGGCATTTGGGGGTGGTGGAC
---------+---------+---------+---------+---------+---------+ 958
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : gcttgacgcaagttacacctggaattctgcccgggctttgggggtggtggaacctttcag
PBL01_0010_A05.b : gttaacctgacgccagttacaaccggaatttcctgctcgggcgtttggggggggtgggac
LNG01_0081_F02.b : TTTAAGCTGGACGCGAGTTACGACCTGGAGTTGCTGCTCGGGCATTTGGGGGTGGTGGAC
20110601C-009201 : GCCTTCCAGCAGGGCAAGGCCGACTTCTCGGCCATGGCCCCCGAGCGGGACCTGAGCCTG
---------+---------+---------+---------+---------+---------+ 1018
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : caggaaaaggcgaattctcggctggggccccgaaagggaacggaacttgtccactttctg
PBL01_0010_A05.b : cccttcccccagggaagggccaaattctcggccagggcccccaagggggacctgaacccg
LNG01_0081_F02.b : GCCTTCCAGCAGGGCAAGGCCGACTTCTCGGCCATGGCCCCCGAGCGGGACCTGAGCCTG
20110601C-009201 : TCCACCTTCGTGCACAAGAGTGTGGTGGAGGTGAACGAGGAAGGCTCGGAGGCGGCGGCG
---------+---------+---------+---------+---------+---------+ 1078
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : gccaaaattggggggaagtaacaaaagaaagcccagagctgtggtcgctcgcccagagtt
PBL01_0010_A05.b : ctcccttttctgccaaaagtgggggggagagaaaaaagaaagggcccaagggggcggggg
LNG01_0081_F02.b : TCCACCTTCGTGCACAAGAGTGTGGTGGAGGTGAACGAGGAAGGCTCGGAGGCGGCGGCG
20110601C-009201 : GCCTCGGCCCTGGTGCTGATGGAGTGCTGCATGGAGTCCGGGCCCAGGTTCTGCGCCGAC
---------+---------+---------+---------+---------+---------+ 1138
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : taagacaagccctgtaaactcgaccatatttatgcgcaaccacctttttctttttataaa
PBL01_0010_A05.b : ctcccccccgggtctaaaagaaggcccaaggaatccgggccccgtttttgcccaaaaccc
LNG01_0081_F02.b : GCCTCGGCCCTGGTGCTGATGGAGTGCTGCATGGAGTCCGGGCCCAGGTTCTGCGCCGAC
20110601C-009201 : CACCCCTTCCTCTTCTTCATCAGGCACAACAAGGCCAAGAGCATCCTCTTCTGTGGCAGG
---------+---------+---------+---------+---------+---------+ 1198
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : accagtgaatcagcccgctctcgtgggggcttccccccggagaaatgatacacctattgg
PBL01_0010_A05.b : ctttttttttttttggggaaaagggagaagaaccctttttggtgggggtttcccccccgg
LNG01_0081_F02.b : CACCCCTTCCTCTTCTTCATCAGGCACAACAAGGCCAAGAGCATCCTCTTCTGTGGCAGG
20110601C-009201 : TTTTCCTCCCCGTGAGCGGTGCACCCGCCTCGCGCGGGAGCCTGTCCCCTTCTGCGGCCC
---------+---------+---------+---------+---------+---------+ 1258
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : gcgacagtccctttgggacgtagacacggggaaccgaggggttgactgacagccgccgcc
PBL01_0010_A05.b : aaggggccaccccccccgggggacgttccctctttggggcgtaatccccccacacccagg
LNG01_0081_F02.b : TTTTCCTCCCCGTGAGCGGTGCACCCGCCTCGCGCGGGAGCCTGTCCCCTTCTGCGGCCC
20110601C-009201 : TGAGTCCCCCCACCAAGCCCCAAAGGTGGCCAGGCAGACNGCCACCCGCTCCACGCGCCT
---------+---------+---------+---------+---------+---------+ 1318
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : taaatattttagaagattgttaccccaccatccaagagagcttgatgagaaggcggtggt
PBL01_0010_A05.b : gggcgcgggaaagcccctctcctgccttttccgggggaacaacttccccccttgataaga
LNG01_0081_F02.b : TGAGTCCCCCCACCAAGCCCCAAAGGTGGCCAGGCAGACNGCCACCCGCTCCACGCGCCT
20110601C-009201 : TTCCCAGGCGGACCACTCATCCACGCCCCTCAGTCCAGACCGCAGGCCTGCAGGCTCTAA
---------+---------+---------+---------+---------+---------+ 1378
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b : accggctcccggtaccacgactctaatatctcg
PBL01_0010_A05.b : gggtgg
LNG01_0081_F02.b : TTCCCAGGCGGACCACTCATCCACGCCCCTCAGTCCAGACCGCAGGCCTGCAGGCTCTAA
20110601C-009201 : GGATGCCCTGGGGCATTTAAGACGCAGCCCGGATCCCA......................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : GGATGCCCTGGGGCATTTAAGACGCAGCCCGGATCCCAcaggacggcnggcagcgtgtcc
20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : ccacatgaccccagaactcctcgctgcccttgtccgcgctcactgacatctcaactctgg
20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : tcacacccgtgcctcagcctcttgcgatagtaaataaatgcactagccgtccctacggtt
20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : taaccacgtcctgctgcctgtggcttttaggaagttcctttaagggcaatttaattttac
20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : ctttttttggacttcatcggccccaccaatgttcgggaccggcgtccggcatggggaccc
20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : aagggagggagcccggtccctgaacctgtgggtctgccagaagggcaccccttaaaacag
20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : gcggaaaggtaggccttgactaaccgggaccccgggaggatagcctttctagttttggtt
20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : ttccccctccctaggggaaacccctgacccaagggggtccaggtcttcgtgggaggtttt
20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : ccggggggggggattttaccctcctgcccaagagcgaagggggttattaatcttttcaca
20110601C-009201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1416
LVRM1_0016_F07.b :
LVRM1_0175_D05.b :
OVRM1_0149_G02.b :
ILNT1_0005_G06.b :
PBL01_0010_A05.b :
LNG01_0081_F02.b : acccccccggggggtgttttctctctccnggaatttgtgtattttaaggggatttt