Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-012295

Sequence: [FASTA format sequence] TCTCGGAAGT CCGAGTCAGT GACCGGAGGC GGCGGCGGCG ATCAGAAAAA TCCTGCAAAA ATGTCTCTCT ACCCATCTCT TGAAGACCTG AAGGTAGACA AGGTGATCCA GGCTCAAACT GCTTTTTCTG CAAACCCTGC CAACCCAGCA ATTTTGTCTG AAGCTTCTGT TCCTGTCTCT CAAGATGGAA ATCTCTATCC TAAACTATAT CCGGAGCTCT CTCAGTACAT GGGCCTGAGT TTAAATGAAG AAGAAATTCG TACAAATATG GCCGTGGTCC CTGGAGCACC AGTTCAGGGG CAGTTGGTTG CAAGACCTTC CAGCATGAAC TATATGGTGG CTCCTGTAAC TGGTAATGAC GCTGGAATCC GTAGAGCAGA AATTAAGCAA GGGATTCGTG AAGTCATTTT ATGTAAGGAT CAAGATGGAA AAATTGGGCT CAGGCTTAAA TCAGTAGATA ATGGCATATT TGTTCAGCTT GTTCAGGCAA ATTCTCCAGC CTCATTAGTT GGGCTGCGAT TCGGGGACCA GGTGCTCCAG ATCAACGGGG AGAACTGTGC AGGCTGGAGC TCGGACCGGG CCCACAAGGT GCTCAAGCAA GCCTTTGGAG AGAAAATTAC CATGACCATT CGGGACCGGC CCTTTGAACG GACAGTTACC ATGCATAAGG ACAGTACTGG ACATGTTGGC TTTATCTTCA AAAACGGGAA GATCACCTCC ATAGTGAAGG ACAGTTCTGC AGCCAGAAAC GGCCTTCTCA CAGAACACAG CATCTGCGAG GTCCATGGAC AGAATGTCAT TGGACTAAAG GACTCTCAGA TTGCAGACAT ACTGGTCACA GCTGGGAATG TCATCACTAT CACAATCATG CCTGCTTTTA TCTTCGAACA TATTATTAAA CGGATGGCAC CCAGCATCAT GAAAAGCCTG ATGGATCCCA CCATCCCTGA GGTCTTAGAG TCGCANCAGC ACAGTGGAAA ACGTGCCNAG CTTCCTCATG C

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
SDCBP syntenin-1 isoform 1 [Homo sapiens]. 551 e-157 O

SDCBP syntenin-1 isoform 1 [Homo sapiens]. 551 e-157 O

SDCBP syntenin-1 isoform 3 [Homo sapiens]. 545 e-155 O

SDCBP syntenin-1 isoform 3 [Homo sapiens]. 545 e-155 O

SDCBP syntenin-1 isoform 2 [Homo sapiens]. 534 e-152 O

SDCBP2 syntenin-2 isoform a [Homo sapiens]. 344 8e-95 O

SDCBP2 syntenin-2 isoform a [Homo sapiens]. 344 8e-95 O

SDCBP2 syntenin-2 isoform b [Homo sapiens]. 296 3e-80 O

APBA1 amyloid beta A4 precursor protein-binding family A member 1 [Homo sapiens]. 60.1 3e-09

APBA2 amyloid beta A4 precursor protein-binding family A member 2 isoform b [Homo sapiens]. 56.2 5e-08

Locus	Definition	Score	E value	FL
SDCBP	syntenin-1 isoform 1 [Homo sapiens].	551	e-157	O
SDCBP	syntenin-1 isoform 1 [Homo sapiens].	551	e-157	O
SDCBP	syntenin-1 isoform 3 [Homo sapiens].	545	e-155	O
SDCBP	syntenin-1 isoform 3 [Homo sapiens].	545	e-155	O
SDCBP	syntenin-1 isoform 2 [Homo sapiens].	534	e-152	O
SDCBP2	syntenin-2 isoform a [Homo sapiens].	344	8e-95	O
SDCBP2	syntenin-2 isoform a [Homo sapiens].	344	8e-95	O
SDCBP2	syntenin-2 isoform b [Homo sapiens].	296	3e-80	O
APBA1	amyloid beta A4 precursor protein-binding family A member 1 [Homo sapiens].	60.1	3e-09
APBA2	amyloid beta A4 precursor protein-binding family A member 2 isoform b [Homo sapiens].	56.2	5e-08

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Sdcbp syntenin-1 isoform 1 [Mus musculus]. 519 e-147 O

Sdcbp syntenin-1 isoform 2 [Mus musculus]. 513 e-145 O

Sdcbp2 syntenin-2 [Mus musculus]. 339 2e-93 O

Apba1 amyloid beta (A4) precursor protein binding, family A, member 1 [Mus musculus]. 60.1 3e-09

Apba2 amyloid beta A4 precursor protein-binding family A member 2 [Mus musculus]. 56.2 4e-08

Apba3 amyloid beta A4 precursor protein-binding family A member 3 [Mus musculus]. 53.9 2e-07

Locus	Definition	Score	E value	FL
Sdcbp	syntenin-1 isoform 1 [Mus musculus].	519	e-147	O
Sdcbp	syntenin-1 isoform 2 [Mus musculus].	513	e-145	O
Sdcbp2	syntenin-2 [Mus musculus].	339	2e-93	O
Apba1	amyloid beta (A4) precursor protein binding, family A, member 1 [Mus musculus].	60.1	3e-09
Apba2	amyloid beta A4 precursor protein-binding family A member 2 [Mus musculus].	56.2	4e-08
Apba3	amyloid beta A4 precursor protein-binding family A member 3 [Mus musculus].	53.9	2e-07

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC482977 PREDICTED: similar to syntenin isoform 3 isoform 1 [Canis familiaris]. 547 e-156 O

LOC482977 PREDICTED: similar to Syntenin-1 (Syndecan binding protein 1) (Melanoma differentiation-associated protein 9) (MDA-9) (Scaffold protein Pbp1) (Pro-TGF-alpha cytoplasmic domain-interacting protein 18) (TACIP18) isoform 2 [Canis familiaris]. 475 e-134 O

LOC485811 PREDICTED: similar to Syntenin-2 (Syndecan binding protein 2) [Canis familiaris]. 347 1e-95 O

LOC488700 PREDICTED: similar to amyloid beta (A4) precursor protein-binding, family A, member 2 isoform 3 [Canis familiaris]. 56.2 5e-08

LOC488700 PREDICTED: similar to amyloid beta (A4) precursor protein-binding, family A, member 2 isoform 2 [Canis familiaris]. 56.2 5e-08

LOC485053 PREDICTED: similar to amyloid beta (A4) precursor protein-binding, family A, member 3 [Canis familiaris]. 52.8 5e-07

Locus	Definition	Score	E value	FL
LOC482977	PREDICTED: similar to syntenin isoform 3 isoform 1 [Canis familiaris].	547	e-156	O
LOC482977	PREDICTED: similar to Syntenin-1 (Syndecan binding protein 1) (Melanoma differentiation-associated protein 9) (MDA-9) (Scaffold protein Pbp1) (Pro-TGF-alpha cytoplasmic domain-interacting protein 18) (TACIP18) isoform 2 [Canis familiaris].	475	e-134	O
LOC485811	PREDICTED: similar to Syntenin-2 (Syndecan binding protein 2) [Canis familiaris].	347	1e-95	O
LOC488700	PREDICTED: similar to amyloid beta (A4) precursor protein-binding, family A, member 2 isoform 3 [Canis familiaris].	56.2	5e-08
LOC488700	PREDICTED: similar to amyloid beta (A4) precursor protein-binding, family A, member 2 isoform 2 [Canis familiaris].	56.2	5e-08
LOC485053	PREDICTED: similar to amyloid beta (A4) precursor protein-binding, family A, member 3 [Canis familiaris].	52.8	5e-07

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
SDCBP syntenin-1 [Bos taurus]. 558 e-159 O

APBA1 amyloid beta A4 precursor protein-binding family A member 1 [Bos taurus]. 60.1 3e-09

APBA1 PREDICTED: amyloid beta A4 precursor protein-binding family A member 1-like [Bos taurus]. 60.1 3e-09

Locus	Definition	Score	E value	FL
SDCBP	syntenin-1 [Bos taurus].	558	e-159	O
APBA1	amyloid beta A4 precursor protein-binding family A member 1 [Bos taurus].	60.1	3e-09
APBA1	PREDICTED: amyloid beta A4 precursor protein-binding family A member 1-like [Bos taurus].	60.1	3e-09

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
SDCBP PREDICTED: syntenin-1 isoform 1 [Sus scrofa]. 585 e-167

SDCBP PREDICTED: syntenin-1 isoform 2 [Sus scrofa]. 557 e-159 O

LOC100513633 PREDICTED: syntenin-2-like [Sus scrofa]. 348 3e-96 O

APBA1 PREDICTED: amyloid beta A4 precursor protein-binding family A member 1, partial [Sus scrofa]. 60.1 2e-09

Locus	Definition	Score	E value	FL
SDCBP	PREDICTED: syntenin-1 isoform 1 [Sus scrofa].	585	e-167
SDCBP	PREDICTED: syntenin-1 isoform 2 [Sus scrofa].	557	e-159	O
LOC100513633	PREDICTED: syntenin-2-like [Sus scrofa].	348	3e-96	O
APBA1	PREDICTED: amyloid beta A4 precursor protein-binding family A member 1, partial [Sus scrofa].	60.1	2e-09

Assembly Members: 6 TOP

Library Plate Loc. Read Name Accession Full Seq.

AMP01 0008 A04 AMP01_0008_A04.b BW955513
AMP01 0053 E09 AMP01_0053_E09.b BW958784
AMP01 0059 E07 AMP01_0059_E07.b BW959270
AMP01 0081 A07 AMP01_0081_A07.b BW960811
AMP01 0098 F12 AMP01_0098_F12.b BW962329 AK399483
AMP01 0102 A08 AMP01_0102_A08.b BW962622

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
260 A 3 0 0.500 W N CAT/H
G 3 0 0.500 CGT/R

Alignment: TOP

20110601C-012295 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
AMP01_0008_A04.b :          tttaacgatacctaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0098_F12.b :     cgcatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0102_A08.b :    ggggtaaactacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0053_E09.b : nnnggagaaaaanttagggacacttgggctgctcxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0059_E07.b :        nnttgattattatagggaatcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0081_A07.b :                        naaaaagatatcaaxxxxxxxxxxxxxxxxxxxxxxx


20110601C-012295 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
AMP01_0008_A04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0098_F12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0102_A08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0053_E09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0059_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0081_A07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-012295 : ....................................................TCTCGGAA
                   ---------+---------+---------+---------+---------+---------+ 8
AMP01_0008_A04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCTCGGAA
AMP01_0098_F12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCTCGGAA
AMP01_0102_A08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCTCGGAA
AMP01_0053_E09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCTCGGAA
AMP01_0059_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAA
AMP01_0081_A07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-012295 : GTCCGAGTCAGTGACCGGAGGCGGCGGCGGCGATCAGAAAAATCC*TGCAAAAATGTCTC
                   ---------+---------+---------+---------+---------+---------+ 67
AMP01_0008_A04.b : GTCCGAGTCAGTGACCGGAGGCGGCGGCGGCGATCACAAAAGTCCGTGCAAAAATGTCTC
AMP01_0098_F12.b : GTCCGAGTCAGTGACCGGAGGCGGCGGCGGCGATCAGAAAAATCC*TGCAAAAATGTCTC
AMP01_0102_A08.b : GTCCGAGTCAGTGACCGGAGGCGGCGGCGGCGATCAGAAAAATCC*TGCAAAAATGTCTC
AMP01_0053_E09.b : GTCCGAGTCAGTGACCGGAGGCGGCGGCGGCGATCAGAAAAATCC*TGCAAAAATGTCTC
AMP01_0059_E07.b : GTCCGAGTCAGTGACCGGAGGCGGCGGCGGCGATCAGAAAAATCC*TGCAAAAATGTCTC
AMP01_0081_A07.b : xxxxxAGTCAGTGACCGGAGGCGGCGGCGGCGATCAGAAAAATCC*TGCAAAAATGTCTC


20110601C-012295 : TCTACCCATCTCTTGAAGACCTGAAGGTAGACAAGGTGATCCAGGCTCAAACTGCTTTTT
                   ---------+---------+---------+---------+---------+---------+ 127
AMP01_0008_A04.b : TCTACCCATCTCTTGAAGACCTGAAGGTAGACAAGGTGATCCAGGCTCAAACTGCTTTTT
AMP01_0098_F12.b : TCTACCCATCTCTTGAAGACCTGAAGGTAGACAAGGTGATCCTGGCTCAAACTGCTTTTT
AMP01_0102_A08.b : TCTACCCATCTCTTGAAGACCTGAAGGCAGACAAGGTGATCCAGGCTCAAACTGCTTTTT
AMP01_0053_E09.b : TCTACCCATCTCTTGAAGACCTGAAGGTAGACAAGGTGATCCAGGCTCAAACTGCTTTTT
AMP01_0059_E07.b : TCTACCCATCTCTTGAAGACCTGAAGGTAGACAAGGTGATCCAGGCTCAAACTGCTTTTT
AMP01_0081_A07.b : TCTACCCATCTCTTGAAGACCTGAAGGTAGACAAGGTGATCCAGGCTCAAACTGCTTTTT


20110601C-012295 : CTGCAAACCCTGCCAACCCAGCAATTTTGTCTGAAGCTTCTGTTCCTGTCTCTCAAGATG
                   ---------+---------+---------+---------+---------+---------+ 187
AMP01_0008_A04.b : CTGCAAACCCTGCCAACCCAGCAATTTTGTCTGAAGCTTCTGTTCCTGTCTCTCAAGATG
AMP01_0098_F12.b : CTGCAAACCCTGCCAACCCAGCAATTTTGTCTGAAGCTTCTGTTCCTGTCTCTCAAGATG
AMP01_0102_A08.b : CTGCAAACCCTGCCAACCCAGCAATTTTGTCTGAAGCTTCTGTTCCTGTCTCTCAAGATG
AMP01_0053_E09.b : CTGCAAACCCTGCCAACCCAGCAATTTTGTCTGAAGCTTCTGTTCCTGTCTCTCAAGATG
AMP01_0059_E07.b : CTGCAAACCCTGCCAACCCAGCAATTTTGTCTGAAGCTTCTGTTCCTGTCTCTCAAGATG
AMP01_0081_A07.b : CTGCAAACCCTGCCAACCCAGCAATTTTGTCTGAAGCTTCTGTTCCTGTCTCTCAAGATG


20110601C-012295 : GAAATCTCTATCCTAAACTATATCCGGAGCTCTCTCAGTACATGGGCCTGAGTTTAAATG
                   ---------+---------+---------+---------+---------+---------+ 247
AMP01_0008_A04.b : GAAATCTCTATCCTAAACTATATCCGGAGCTCTCTCAGTACATGGGCCTGAGTTTAAATG
AMP01_0098_F12.b : GAAATCTCTATCCTAAACTATATCCGGAGCTCTCTCAGTACATGGGCCTGAGTTTAAATG
AMP01_0102_A08.b : GAAATCTCTATCCTAAACTATATCCGGAGCTCTCTCAGTACATGGGCCTGAGTTTAAATG
AMP01_0053_E09.b : GAAATCTCTATCCTAAACTATATCCGGAGCTCTCTCAGTACATGGGCCTGAGTTTAAATG
AMP01_0059_E07.b : GAAATCTCTATCCTAAACTATATCCGGAGCTCTCTCAGTACATGGGCCTGAGTTTAAATG
AMP01_0081_A07.b : GAAATCTCTATCCTAAACTATATCCGGAGCTCTCTCAGTACATGGGCCTGAGTTTAAATG


20110601C-012295 : AAGAAGAAATTCGTACAAATATGGCCGTGGTCCCTGGAGCACCAGTTCAGGGGCAGTTGG
                   ---------+---------+---------+---------+---------+---------+ 307
AMP01_0008_A04.b : AAGAAGAAATTCATACAAATATGGCCGTGGTCCCTGGAGCACCAGTTCAGGGGCAGTTGG
AMP01_0098_F12.b : AAGAAGAAATTCATACAAATATGGCCGTGGTCCCTGGAGCACCAGTTCAGGGGCAGTTGG
AMP01_0102_A08.b : AAGAAGAAATTCGTACAAATATGGCCGTGGTCCCTGGAGCACCAGTTCAGGGGCAGTTGG
AMP01_0053_E09.b : AAGAAGAAATTCGTACAAATATGGCCGTGGTCCCTGGAGCACCAGTTCAGGGGCAGTTGG
AMP01_0059_E07.b : AAGAAGAAATTCGTACAAATATGGCCGTGGTCCCTGGAGCACCAGTTCAGGGG***TTGG
AMP01_0081_A07.b : AAGAAGAAATTCATACAAATATGGCCGTGGTCCCTGGAGCACCAGTTCAGGGGCAGTTGG


20110601C-012295 : TTGCAAGACCTTCCAGCATGAACTATATGGTGGCTCCTGTAACTGGTAATGACGCTGGAA
                   ---------+---------+---------+---------+---------+---------+ 367
AMP01_0008_A04.b : TTGCAAGACCTTCCAGCATGAACTATATGGTGGCTCCTGTAACTGGTAATGACGCTGGAA
AMP01_0098_F12.b : TTGCAAGACCTTCCAGCATGAACTATATGGTGGCTCCTGTAACTGGTAATGACGCTGGAA
AMP01_0102_A08.b : TTGCAAGACCTTCCAGCATGAACTATATGGTGGCTCCTGTAACTGGTAATGACGCTGGAA
AMP01_0053_E09.b : TTGCAAGACCTTCCAGCATGAACTATATGGTGGCTCCTGTAACTGGTAATGACGCTGGAA
AMP01_0059_E07.b : TTGCAAGACCTTCCAGCATGAACTATATGGTGGCTCCTGTAACTGGTAATGACGCTGGAA
AMP01_0081_A07.b : TTGCAAGACCTTCCAGCATGAACTATATGGTGGCTCCTGTAACTGGTAATGACGCTGGAA


20110601C-012295 : TCCGTAGAGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTATGTAAGGATCAAGATG
                   ---------+---------+---------+---------+---------+---------+ 427
AMP01_0008_A04.b : TCCGTACAGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTATGTAAGGATCAAGATG
AMP01_0098_F12.b : TCCGTAGAGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTATGTAAGGATCAAGATG
AMP01_0102_A08.b : TCCGTAGAGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTATGTAAGGATCAAGATG
AMP01_0053_E09.b : TCCGTAGAGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTATGTAAGGATCAAGATG
AMP01_0059_E07.b : TCCGTAGAGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTATGTAAGGATCAAGATG
AMP01_0081_A07.b : TCCGTAGAGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTATGTAAGGATCAAGATG


20110601C-012295 : GAAAAATTGGGCTCAGGCTTAAATCAGTAGATAATGGCATATTTGTTCAGCTTGTTCAGG
                   ---------+---------+---------+---------+---------+---------+ 487
AMP01_0008_A04.b : GAAAAATTGGGCTCAGGCTTAAATCAGTAGATAATGGCATATTTGTTCAGCTTGTTCAGG
AMP01_0098_F12.b : GAAAAATTGGGCTCAGGCTTAAATCAGTAGATAATGGCATATTTGTTCAGCTTGTTCAGG
AMP01_0102_A08.b : GAAAAATTGGGCTCAGGCTTAAATCAGTAGATAATGGCATATTTGTTCAGCTTGTTCAGG
AMP01_0053_E09.b : GAAAAATTGGGCTCAGGCTTAAATCAGTAGATAATGGCATATTTGTTCAGCTCGTTCAGG
AMP01_0059_E07.b : GAAAAATTGGGCTCAGGCTTAAATCAGTAGATAATGGCATATTTGTTCAGCTTGTTCAGG
AMP01_0081_A07.b : GAAAAATTGGGCTCAGGCTTAAATCAGTAGATAATGGCATATTTGTTCAGCTTGTTCAGG


20110601C-012295 : CAAATTCTCCAGCCTCATTAGTTGGGCTGCGATTCGGGGACCAGGTGCTCCAGATCAACG
                   ---------+---------+---------+---------+---------+---------+ 547
AMP01_0008_A04.b : CAAATTCTCCAGCCTCATTAGTTGGGCTGCGATTCGGGGACCAGGTGCTCCACATCAACG
AMP01_0098_F12.b : CAAATTCTCCAGCCTCATTAGTTGGGCTGCGATTCGGGGACCAGGTGCTCCAGATCAACG
AMP01_0102_A08.b : CAAATTCTCCAGCCTCATTAGTTGGGCTGCGATTCGGGGACCAGGTGCTCCAGATCAACG
AMP01_0053_E09.b : CAAATTCTCCAGCCTCATTAGTTGGGCTGCGATTCGGGGACCAGGTGCTCCAGATCAACG
AMP01_0059_E07.b : CAAATTCTCCAGCCTCATTAGTTGGGCTGCGATTCGGGGACCAGGTGCTCCAGATCAACG
AMP01_0081_A07.b : CAAATTCTCCAGCCTCATTAGTTGGGCTGCGATTCGGGGACCAGGTGCTCCAGATCAACG


20110601C-012295 : GGGAGAACTGTGCAGGCTGGAGCTCGGACCGGGCCCACAAGGTGCTCAAGCAAGCCTTTG
                   ---------+---------+---------+---------+---------+---------+ 607
AMP01_0008_A04.b : GGGAGAACTGTGCAGGCTGGAGCTCGGACCGGGCCCACAAGGTGCTCAAGCAAGCCTTTG
AMP01_0098_F12.b : GGGAGAACTGTGCAGGCTGGAGCTCGGACCGGGCCCACAAGGTGCTCAAGCAAGCCTTTG
AMP01_0102_A08.b : GGGAGAACTGTGCAGGCTGGAGCTCGGACCGGGCCCACAAGGTGCTCAAGCAAGCCTTTG
AMP01_0053_E09.b : GGGAGAACTGTGCAGGCTGGAGCTCGGACCGGGCCCACAAGGTGCTCAAGCAAGCCTTTG
AMP01_0059_E07.b : GGGAGAACTGTGCAGGCTGGAGCTCGGACCGGGCCCACAAGGTGCTCAAGCAAGCCTTTG
AMP01_0081_A07.b : GGGAGAACTGTGCAGGCTGGAGCTCGGACCGGGCCCACAAGGTGCTCAAGCAAGCCTTTG


20110601C-012295 : GAGAGAAAATTACCATGACCATTCGGGACCGGCCCTTTGAACGGACAGTTACCATGCATA
                   ---------+---------+---------+---------+---------+---------+ 667
AMP01_0008_A04.b : GAGAGAAAATTACCATGACCATTCGGGACCGGCCCTTTGAACGGACAGTTACCATGCCTA
AMP01_0098_F12.b : GAGAGAAAATTACCATGACCATTCGGGACCGGCCCTTTGAACAGACAGTTACCATGCATA
AMP01_0102_A08.b : GAGAGAAAATTACCATGACCATTCGGGACCGGCCCTTTGAACGGACAGTTACCATGCATA
AMP01_0053_E09.b : GAGAGAAAATTACCATGACCATTCGGGACCGGCCCTTTGAACGGACAGTTACCATGCATA
AMP01_0059_E07.b : GAGAGAAAATTACCATGACCATTCGGGACCGGCCCTTTGAACGGACAGTTACCATGCATA
AMP01_0081_A07.b : GAGAGAAAATTACCATGACCATTCGGGACCGGCCCTTTGAACGGACAGTCACCATGCATA


20110601C-012295 : AGGACAGTACTGGACATGTTGGCTTTATCTTCAAAAACGGGAAGATCACCTCCATAGTGA
                   ---------+---------+---------+---------+---------+---------+ 727
AMP01_0008_A04.b : AAGACAGTACTGGACATGTTGGCTTTATCTTCCAAAACGGGAAGATCACCTCCATAGTGA
AMP01_0098_F12.b : AAGACAGTACTGGACATGTTTGGCTTATCTTCAAAAACGGGAAGATCACCTCCATAGTGA
AMP01_0102_A08.b : AGGACAGTACTGGACATGTTGGCTTTATCTTCAAAAACGGGAAGATCACCTCCATAGTGA
AMP01_0053_E09.b : AGGACAGTACTGGACATGTTGGCTTTATCTTCAAAAACGGGAAGATCACCTCCATAGTGA
AMP01_0059_E07.b : AGGACAGTACTGGACATGTTGGCTTTATCTTCAAAAACGGGAAGATCACCTCCATAGTGA
AMP01_0081_A07.b : AGGACAGTACTGGACATGTTGGCTTTATCTTCAAAAACGGGAAGATCACCTCCATAGTGA


20110601C-012295 : AGGACAGTTCTGCAGCCAGAAACGGCCTTCTCACAGAACACAGCATCTGCGAGGTCCATG
                   ---------+---------+---------+---------+---------+---------+ 787
AMP01_0008_A04.b : AGGACAGGTCTGCAGCCCAAAACGGCTTCTCCAT**AAAACAGCATCTGCgaaggtcatg
AMP01_0098_F12.b : AGGACAGTTCTGCAGCCAGAAACGGCCCTCTCACAGAACACAGCATCTGCCAGGTCCATG
AMP01_0102_A08.b : AGGACAGTTCTGCAGCCAGA*ACGGCCTTCTCACAGAACACAGCATCTGCGAGGTCAATG
AMP01_0053_E09.b : ANGACAGTTCTGCAGCCAGAAACGGCCTTCTCACAGAACACAGCATCTGCGAGGGTCATG
AMP01_0059_E07.b : AGGACAGTTCTGCAGCCAGAAACTGCCTTCTCACAGAACACAGCATCTGCGAAGGTCATG
AMP01_0081_A07.b : AGGACAGTTCTGCAGCCAGAAACGGCCTTCTCACAGAACACAGCATCTGCGAGGTCAATG


20110601C-012295 : GACAGAATGTCATTGGACTAAAGGACTCTCAGATTGCAGACATACTGGTCACAGCTGGGA
                   ---------+---------+---------+---------+---------+---------+ 847
AMP01_0008_A04.b : gaacaaatgtctttggactaaagactctccaattgcaaaatactgtccacaactgggaat
AMP01_0098_F12.b : GACAGA*TGTCTTTGAACT*AAGGACTCTCAGATTGCAAAC*TACTGGTCACAGCTGGGG
AMP01_0102_A08.b : GACAGAATGTCATGGGACTAAAG*ACTCTCAGATTGCAGACATACTG*TCAACACTGGGG
AMP01_0053_E09.b : GACAGAATGTCATTGGACTAAAGGACTCTCAGATTGCAGACATACTGGTCACAGCTGGGA
AMP01_0059_E07.b : GACAGAATGTCATTGGNACTAAAGACTCTCAAATTGCAGACATNACTGTCACAGCTGGGG
AMP01_0081_A07.b : GACAGAATGTCATTGGACTNAAGGACTCTCAGATTGCAGACATACTNGTCACAGCTGGGA


20110601C-012295 : ATGTCATCACTATCACAATCATGCC*TGCTTTTATCTTCGAACATATTATTAAACGGATG
                   ---------+---------+---------+---------+---------+---------+ 906
AMP01_0008_A04.b : ggcatcactatcaccatcatgcccgctttatcctccaacatattattaaacggagtgccc
AMP01_0098_F12.b : ATGTCATCCCTATCCCAATCATGCC*TGCTTTTATCTTTCAACTTATTATTAAccggagg
AMP01_0102_A08.b : ATGTCCTCACTATCCCCATCCTGCCCTGCTTTTATCTTCGAACATATTATTAAACGGATG
AMP01_0053_E09.b : ATGTCATCACTATCACAATCATGCC*TGCTTTTATCTNCGNACATATTATTAANCGGATG
AMP01_0059_E07.b : ATGTCATCACTANTCACATCATGCC*TGCTTTTATCTTCGAACATATAATTAAACGGGAT
AMP01_0081_A07.b : ATGTCATCACTATCACAATCATGCCCTGCTTTTATCT*CGAACATANNTATAAANCGATG


20110601C-012295 : G*CACCCAGCATCATGAAAAGCCTGATGGATCCCACCATCCCTGAGGTCTTAGAGTCGCA
                   ---------+---------+---------+---------+---------+---------+ 965
AMP01_0008_A04.b : ccccctccttaaaacccggaggaatcccccatccctggaggctaaaatccccacccccat
AMP01_0098_F12.b : cacccacctttctggaaaccccgaagggatccccccttccccgaaggtctaaaaatcccc
AMP01_0102_A08.b : G*CACCCAGCATCATGAAAAGCCTGATGGATCAAACCATCCCctgagtcttaaagtccca
AMP01_0053_E09.b : GNCACCCAGCATCATG*AAAGCCTGATGGATCCCACCATCCCTGAGGgctaaaagtccca
AMP01_0059_E07.b : GGCACCCAGC*TCATGAAAAGCCTGATGGATCCCACCATCCCTGaggtctaaagtcccac
AMP01_0081_A07.b : G*CACCCAGCATCATGAAAAGCCTGATGGATCACACAATCCCTGANGTCTTAGAGTCGCA


20110601C-012295 : NCAGCACAGTGGAAAACGTGCCNAGCTTCCTCATGC........................
                   ---------+---------+---------+---------+---------+---------+ 1001
AMP01_0008_A04.b : ggtaaaagggcgcaaccttcccctcgcaccccccaagaatatattttttcttaccttaaa
AMP01_0098_F12.b : cccaccccattgggaaacggtgcccagccttcctccttcccacctctttcgttgatttcc
AMP01_0102_A08.b : ccacccccttggaaacggtgccaacctttcccctgccaacctcctttgtggactcccttt
AMP01_0053_E09.b : acagcacaatgggaacgggggcaagcttctcccgggaccccttaagggaattcctttttc
AMP01_0059_E07.b : cagcccattggaaagggggcnagcttcccaggggacccttcagggattccctttctcttt
AMP01_0081_A07.b : NCAGCACAGTGGAAAACGTGCCNAGCTTCCTCATGCcactcttcaatgactccactttcc


20110601C-012295 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1001
AMP01_0008_A04.b : atttttgggacgccaacacaagtttcccaaggtcttct                     
AMP01_0098_F12.b : ctttttccttttttccccttaaaacctttttcagagaaccccaaaaaacattttgtgggg
AMP01_0102_A08.b : cccctttggcccatgaagcttttcagggaacccaaaaaaaaaattgccccggcccggggg
AMP01_0053_E09.b : ctttagcccataaacttcccagaaaccaaaaagaatttttgggcagagggcttctgtttc
AMP01_0059_E07.b : gcccaaaaacttttgggaaccaaaaaaaagtgtgggaggccttctgttcgggggggggct
AMP01_0081_A07.b : ctatgccatgaagctttcgagagcccaaagcattgctgcccaagggccttccgttccgca


20110601C-012295 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1001
AMP01_0008_A04.b :                                                             
AMP01_0098_F12.b : ccccggggggcccctctcgtttttccgggggggggggccccctttttaaattgttttttt
AMP01_0102_A08.b : gcctttcctggtttccccgcggggggggcccctcttacttgtttttttctctcatttgtt
AMP01_0053_E09.b : ggggggggggcccttatggttttt                                   
AMP01_0059_E07.b : ttaaggtttttcgaggttggtacaacccgaaatttgcccttcccctttccaaggggaact
AMP01_0081_A07.b : ggngggcccttaaggttatccggatccgtgtcaattccgaaaaatttggctttcccattt


20110601C-012295 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1001
AMP01_0008_A04.b :                                                             
AMP01_0098_F12.b : ctttttatgtgttgttttttttttttaaaaacttttaaaaaaaaaaatttttgtgtttcc
AMP01_0102_A08.b : tttttttttcaaaactctccaaaaaaatatttttttaacccctctctctccccccatttt
AMP01_0053_E09.b :                                                             
AMP01_0059_E07.b : taattttgacctttgtctttttttttggaccggcccct                     
AMP01_0081_A07.b : tgaaagggaaaaa                                              


20110601C-012295 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1001
AMP01_0008_A04.b :                                                             
AMP01_0098_F12.b : cctcctttttccctcca                                          
AMP01_0102_A08.b : ttttttt                                                    
AMP01_0053_E09.b :                                                             
AMP01_0059_E07.b :                                                             
AMP01_0081_A07.b :