[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-013233
Length:
1,319
Sequence:
[FASTA format sequence]
TTTTTTTTGC TTCACTGCTC CTGGCAATCT CTTGCCCTGA TTTCCAGTGT GGGCTGAGGA
TCCAGGTCAG TGAGAAGCCT GGCACTAGGT TTGCCTGTGT GGGTGCTGCT GATAGGGATC
AGCTGCTCCA GGCTGGGGCT GGGCTGGGTC TGGAGGCTGG GGGTTGAGCA CAAGACCCCA
GCCCCCGGCT CAGGCTCTGT GGAGGAGCTG GTGGAAGTGC CTCTGCCTGC CTAGCTGGGC
TCACCTGAGA GGTTCTGAGC CAGGACCAGA AGAGAATTGT CTGTAGGTTG GAGAATAGAA
ACAGAGTACC CTCAGTGAGT TCCAAGACTA GCTCTTCAGC AGAGAGAGAA TTCCTCAGGG
AACCCAGCGG CTCCTCTTCT CCAGGATCCA GCACAGAAAT GGCTTCCTCC TTCAAGCCCC
GAGAATGTAA CCTGTCTAAA CAGGAAGGGC AGAGCTATGG CTTCTTCCTG CGAATTGAGA
AGGACACTGA TGGCCACCTG GTCCGGGTGG TTGAGAAGGG TAGCCCAGCA GAGAAGGCGG
GTCTGCAGGA TGGAGACAGA GTTCTCAGGA TCAATGGTGT CTTTGTGGAC AAGAAAGAGC
ATATGCAGGT TGTGGATCTG GTCAGAAAGA GTGGGAATTC AGTGACTTTA CTAGTTCTGG
ATGGGGATTC CTATGAGAAA GCCATGAAAA AGCAAGTAGA TTTGAAAGAG TTGGGTCAAA
GCCAGGAGTC GAGTTTGAAT GATAAGAAAC TACCTTCTGT GATGAATGGA GGAGCACAGA
CTTGGACCCA GCCACGGCTC TGCTACCTGG TGAAGGAGGG GAGTAGCTAT GGCTTTTCTC
TGAAAACTGT CCAAGATAAA AAGGGAGTGT ACATGACTGA TATAAAGCCT CAAGGTGTGG
CTATGAAAGC TGGAGTCCTG GCTGATGATC ACTTGATTGA AGTGAATGGG GAGAATGTAG
AAGATGCCAG CCATGAGGAG GTGGTTGAAA AGGTGAAGAA GTCCGGAAGC CGTGTTATGT
TCCTGCTGGT GGACAAGGAA ACTGACAAGT ACCATAGTGA GCAGAAGATA AAAGTCAAGA
GAGAAACAGC CAGTTTGAAA CTGCTACCCC ACCAGCCTCG GATTGTGGAG ATGAAGAAGG
GGAGCAATGG CTATGGTTTC TATTTGAGGG CAGGCCCAGA ACAGAAAGGT CAAATTGTCA
GGACATAGAT TCCAGAAGTC CAGCAGAAGA AGGTGGGCTG AAGAACAATG ACCTGGTGGT
TGCTGTCAAT GGCGAGTGTG GGGATCCCCT CGATCATGAC AGTGTGGTGG GAATGATTA
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | PDZK1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF3 isoform 1 [Homo sapiens]. | 469 | e-144 | O |
|
| PDZK1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF3 isoform 1 [Homo sapiens]. | 469 | e-144 | O |
|
| PDZK1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF3 isoform 2 [Homo sapiens]. | 319 | 3e-87 | O |
|
| SLC9A3R1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF1 [Homo sapiens]. | 137 | 2e-32 | O |
|
| SLC9A3R2 | Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform a [Homo sapiens]. | 134 | 2e-31 | O |
|
| SLC9A3R2 | Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform b [Homo sapiens]. | 134 | 2e-31 | O |
|
| PDZD3 | Na(+)/H(+) exchange regulatory cofactor NHE-RF4 isoform 1 [Homo sapiens]. | 134 | 1e-31 | O |
|
| PDZD3 | Na(+)/H(+) exchange regulatory cofactor NHE-RF4 isoform 2 [Homo sapiens]. | 116 | 4e-26 | O |
|
| MAGI1 | membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform c [Homo sapiens]. | 81.6 | 1e-15 | |
|
| MAGI1 | membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform a [Homo sapiens]. | 81.6 | 1e-15 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Pdzk1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF3 [Mus musculus]. | 441 | e-124 | O |
|
| Pdzk1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF3 [Mus musculus]. | 441 | e-124 | O |
|
| Slc9a3r1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF1 [Mus musculus]. | 139 | 6e-33 | O |
|
| Slc9a3r2 | Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform A [Mus musculus]. | 133 | 4e-31 | O |
|
| Pdzd3 | Na(+)/H(+) exchange regulatory cofactor NHE-RF4 [Mus musculus]. | 123 | 1e-32 | O |
|
| Magi1 | membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform c [Mus musculus]. | 81.6 | 1e-15 | |
|
| Magi1 | membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform d [Mus musculus]. | 78.6 | 1e-14 | |
|
| Magi1 | membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform b [Mus musculus]. | 78.2 | 1e-14 | |
|
| Slc9a3r2 | Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform B [Mus musculus]. | 76.6 | 4e-14 | O |
|
| Dlg1 | disks large homolog 1 [Mus musculus]. | 63.9 | 3e-10 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC475823 | PREDICTED: similar to PDZ domain containing 1 [Canis familiaris]. | 476 | e-134 | O |
|
| LOC476208 | PREDICTED: similar to PDZ domain containing 1 [Canis familiaris]. | 187 | 3e-47 | O |
|
| LOC483299 | PREDICTED: similar to Ezrin-radixin-moesin binding phosphoprotein 50 (EBP50) (Na(+)/H(+) exchange regulatory cofactor NHE-RF) (NHERF-1) (Regulatory cofactor of Na(+)/H(+) exchanger) (Sodium-hydrogen exchanger regulatory factor 1) (Solute carrier family 9 isof... [Canis familiaris]. | 136 | 5e-32 | |
|
| LOC610585 | PREDICTED: similar to natrium-phosphate cotransporter IIa C-terminal-associated protein 2 [Canis familiaris]. | 128 | 4e-33 | O |
|
| LOC479884 | PREDICTED: similar to Na(+)/H(+) exchange regulatory cofactor NHE-RF2 (NHERF-2) (Tyrosine kinase activator protein 1) (TKA-1) (SRY interacting protein 1) (SIP-1) (Solute carrier family 9 isoform A3 regulatory factor 2) (NHE3 kinase A regulatory protein E3KARP... [Canis familiaris]. | 125 | 9e-29 | |
|
| LOC476565 | PREDICTED: similar to Membrane associated guanylate kinase, WW and PDZ domain containing protein 1 (BAI1-associated protein 1) (BAP-1) (Membrane associated guanylate kinase inverted-1) (MAGI-1) (Atrophin-1 interacting protein 3) (AIP3) (WW domain-containing p... [Canis familiaris]. | 80.1 | 4e-15 | |
|
| LOC610850 | PREDICTED: similar to harmonin isoform a isoform 4 [Canis familiaris]. | 63.9 | 3e-10 | O |
|
| LOC610850 | PREDICTED: similar to harmonin isoform a isoform 1 [Canis familiaris]. | 63.9 | 3e-10 | O |
|
| LOC488036 | PREDICTED: similar to synapse-associated protein 97 [Canis familiaris]. | 63.2 | 6e-10 | |
|
| LOC474708 | PREDICTED: similar to multiple PDZ domain protein [Canis familiaris]. | 59.3 | 8e-09 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| PDZK1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF3 [Bos taurus]. | 493 | e-139 | O |
|
| SLC9A3R1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF1 [Bos taurus]. | 136 | 5e-32 | O |
|
| PDZD3 | Na(+)/H(+) exchange regulatory cofactor NHE-RF4 [Bos taurus]. | 130 | 9e-34 | O |
|
| CNKSR3 | PREDICTED: membrane associated guanylate kinase, WW and PDZ domain containing 1 [Bos taurus]. | 81.6 | 1e-15 | |
|
| CNKSR3 | PREDICTED: membrane associated guanylate kinase, WW and PDZ domain containing 1 isoform 1 [Bos taurus]. | 81.6 | 1e-15 | |
|
| CNKSR3 | PREDICTED: membrane associated guanylate kinase, WW and PDZ domain containing 1 isoform 2 [Bos taurus]. | 81.6 | 1e-15 | |
|
| SLC9A3R2 | Na(+)/H(+) exchange regulatory cofactor NHE-RF2 [Bos taurus]. | 76.6 | 4e-14 | O |
|
| USH1C | harmonin [Bos taurus]. | 62.8 | 7e-10 | O |
|
| MAGI3 | membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 [Bos taurus]. | 50.8 | 3e-06 | |
|
| MAGI3 | PREDICTED: membrane associated guanylate kinase, WW and PDZ domain containing 3 isoform 2 [Bos taurus]. | 50.8 | 3e-06 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| PDZK1 | PREDICTED: Na(+)/H(+) exchange regulatory cofactor NHE-RF3 isoform 1 [Sus scrofa]. | 530 | e-151 | O |
|
| PDZK1 | PREDICTED: Na(+)/H(+) exchange regulatory cofactor NHE-RF3 isoform 2 [Sus scrofa]. | 530 | e-151 | O |
|
| PDZD3 | PREDICTED: Na(+)/H(+) exchange regulatory cofactor NHE-RF4 isoform 1 [Sus scrofa]. | 139 | 2e-36 | O |
|
| SLC9A3R1 | Na(+)/H(+) exchange regulatory cofactor NHE-RF1 [Sus scrofa]. | 135 | 5e-32 | O |
|
| LOC100621228 | PREDICTED: Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like [Sus scrofa]. | 135 | 5e-32 | O |
|
| SLC9A3R2 | Na(+)/H(+) exchange regulatory cofactor NHE-RF2 [Sus scrofa]. | 131 | 7e-31 | O |
|
| PDZD3 | PREDICTED: Na(+)/H(+) exchange regulatory cofactor NHE-RF4 isoform 2 [Sus scrofa]. | 120 | 5e-31 | O |
|
| MAGI1 | PREDICTED: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 [Sus scrofa]. | 80.9 | 1e-15 | |
|
| LOC100514274 | PREDICTED: harmonin-like [Sus scrofa]. | 63.5 | 2e-10 | O |
|
| DLG1 | PREDICTED: disks large homolog 1 [Sus scrofa]. | 61.2 | 1e-09 |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
20110601C-013233 : .......................................................TTTTT
---------+---------+---------+---------+---------+---------+ 5
ITT01_0008_F09.b : nnnaagatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTTTT
KDN01_0069_E06.b :
KDN01_0013_H06.b :
KDN01_0014_H06.b :
KDN01_0005_A03.b :
LVRM1_0035_C07.b :
20110601C-013233 : TTTGCTTCACTGCTCCTGGCAATCTCTTGCCCTGATTTCCAGTGTGGGCTGAGGATCCAG
---------+---------+---------+---------+---------+---------+ 65
ITT01_0008_F09.b : TTTGCTTCACTGCTCCTGGCAATCTCTTGCCCTGATTTCCAGTGTGGGCTGAGGATCCAG
KDN01_0069_E06.b :
KDN01_0013_H06.b :
KDN01_0014_H06.b :
KDN01_0005_A03.b :
LVRM1_0035_C07.b :
20110601C-013233 : GTCAGTGAGAAGCCTGGCACTAGGTTTGCCTGTGTGGGTGCTGCTGATAGGGATCAGCTG
---------+---------+---------+---------+---------+---------+ 125
ITT01_0008_F09.b : GTCAGTGAGAAGCCTGGCACTAGGTTTGCCTGTGTGGGTGCTGCTGATAGGGATCAGCTG
KDN01_0069_E06.b :
KDN01_0013_H06.b :
KDN01_0014_H06.b :
KDN01_0005_A03.b :
LVRM1_0035_C07.b :
20110601C-013233 : CTCCAGGCTGGGGCTGGGCTGGGTCTGGAGGCTGGGGGTTGAGCACAAGACCCCAGCCCC
---------+---------+---------+---------+---------+---------+ 185
ITT01_0008_F09.b : CTCCAGGCTGGGGCTGGGCTGGGTCTGGAGGCTGGGGGTTGAGCACAAGACCCCAGCCCC
KDN01_0069_E06.b :
KDN01_0013_H06.b :
KDN01_0014_H06.b :
KDN01_0005_A03.b :
LVRM1_0035_C07.b :
20110601C-013233 : CGGCTCAGGCTCTGTGGAGGAGCTGGTGGAAGTGCCTCTGCCTGCCTAGCTGGGCTCACC
---------+---------+---------+---------+---------+---------+ 245
ITT01_0008_F09.b : CGGCTCAGGCTCTGTGGAGGAGCTGGTGGAAGTGCCTCTGCCTGCCTAGCTGGGCTCACC
KDN01_0069_E06.b :
KDN01_0013_H06.b : tatangggnnncctgcgttggctaggacatttggcagggaacggacagaggt
KDN01_0014_H06.b : ncgcattnnnnnnncctgcgttggctaggacatttggaggaacaggaagagg
KDN01_0005_A03.b :
LVRM1_0035_C07.b :
20110601C-013233 : TGAGAGGTTCTGAGCCAGGACCAGAAGAGAATTGTCTGTAGGTTGGAGAATAGAAACAGA
---------+---------+---------+---------+---------+---------+ 305
ITT01_0008_F09.b : TGAGAGGTTCTGAGCCAGGACCAGAAGAGAATTGTCTGTAGGTTGGAGAATAGAAACAGA
KDN01_0069_E06.b : nnnaactgaggtggctatgaaacatctttgt
KDN01_0013_H06.b : cacttgaattcagaccacacgtccctgttaaatacatcagcttttaaatcaatctttgtt
KDN01_0014_H06.b : tcacttgaattcagaccacacgtccctgttaatacatcagcttttaaatcaatctttgtt
KDN01_0005_A03.b : nttgctgcggtgtgctcgg
LVRM1_0035_C07.b : gagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013233 : GTACCCTCAGTGAGTTCCAAGACTAGCTCTTCAGCAGAGAGAGAATTCCTCAGGGAACCC
---------+---------+---------+---------+---------+---------+ 365
ITT01_0008_F09.b : GTACCCTCAGTGAGTTCCAAGACTAGCTCTTCAGCAGAGAGAGAATTCCTCAGGGAACCC
KDN01_0069_E06.b : tcAAGTCCAGTGAGTTCCA*GACTAGCTCTTCAGCAGAGAGAGAATTCCTCAGGGAACCC
KDN01_0013_H06.b : caaagtcCAGTGAGTTCCAAGACTAGCTCTTCAGCAGAGAGAGAATTCCTCAGGGAACCC
KDN01_0014_H06.b : caaagtcCAGTGAGTTCCAAGACTAGCTCTTCAGCAGAGAGAGAATTCCTCAGGGAACCC
KDN01_0005_A03.b : gtcaagtcanTGAGTTCCAAGACTAGCTCTTCAGCAGAGAGAGAATTCCTCAGGGAACCC
LVRM1_0035_C07.b : xxxxxxxxxxxxxxxxxxxxGACTAGCTCTTCAGCAGAGAGAGAATTCCTCAGGGAACCC
20110601C-013233 : A*GCGGCTCCTCTTCTCCAGGATCCAGCACAGAAATGGCTTCCTCCTTCAAGCCCCGAGA
---------+---------+---------+---------+---------+---------+ 424
ITT01_0008_F09.b : A*GCGGCTCCTCTTCTCCAGGATCCAGCACAGAAATGGCTTCCTCCTTCAAGCCCCGAGA
KDN01_0069_E06.b : A*GCGGCTCCTCTTCTCCAGGATCCAGCACAGAAATGGCTCCCTCCTTCAAGCCCCGAGA
KDN01_0013_H06.b : A*GCGGCTCCTCTTCTCCAGGATCCAGCACAGAAATGGCTTCCTCCTTCAAGCCCCGAGA
KDN01_0014_H06.b : A*GCGGCTCCTCTTCTCCAGGATCCAGCACAGAAATGGCTTCCTCCTTCAAGCCCCGAGA
KDN01_0005_A03.b : ANGCGGCTCCTCTTCTCCAGGATCCAGCACAGAAATGGCTTCCTCCTTCAAGCCCCGAGA
LVRM1_0035_C07.b : A*GCGGCTCCTCTTCTCCAGGATCCAGCACAGAAATGGCTTCCTCCTCCAAGCCCCGAGA
20110601C-013233 : ATGTAACCTGTCTAAACAGGAAGGGCAGAGCTATGGCTTCTTCCTGCGAATTGAGAAGGA
---------+---------+---------+---------+---------+---------+ 484
ITT01_0008_F09.b : ATGTAACCTGTCTAAACAGGAAGGGCAGAGCTATGGCTTCTTCCTGCGAATTGAGAAGGA
KDN01_0069_E06.b : ATGTAACCTGTCTAAACAGGAAGGGCAGAGCTATGGCTTCTTCCTGCGAATTGAGAAGGA
KDN01_0013_H06.b : ATGTAACCTGTCTAAACAGGAAGGGCAGAGCTATGGCTTCTTCCTGCGAATTGAGAAGGA
KDN01_0014_H06.b : ATGTAACCTGTCTAAACAGGAAGGGCAGAGCTATGGCTTCTTCCTGCGAATTGAGAAGGA
KDN01_0005_A03.b : ATGTAACCTGTCTAAACAGGAAGGGCAGAGCTATGGCTTCTTCCTGCGAATTGAGAAGGA
LVRM1_0035_C07.b : ATGTAACCTGTCTAAACAGGAAGGGCAGAGCTATGGCTTCTTCCTGCGAATTGAGAAGGA
20110601C-013233 : CACTGATGGCCACCTGGTCCGGGTGGTTGAGAAGGGTAGCCCAGCAGAGAAGGCGGGTCT
---------+---------+---------+---------+---------+---------+ 544
ITT01_0008_F09.b : CACTGATGGCCACCTGGTCCGGGTGGTTGAGAAGGGTAGCCCAGCAGAGAAGGCGGGTCT
KDN01_0069_E06.b : CACTGATGGCCACCTGGTCCGGGTGGTTGAGAAGGGTAGCCCAGCAGAGAAGGCGGGTCT
KDN01_0013_H06.b : CACTGATGGCCACCTGGTCCGGGTGGTTGAGAAGGGTAGCCCAGCAGAGAAGGCGGGTCT
KDN01_0014_H06.b : CACTGATGGCCACCTGGTCCGGGTGGTTGAGAAGGGTAGCCCAGCAGAGAAGGCGGGTCT
KDN01_0005_A03.b : CACTGATGGCCACCTGGTCCGGGTGGTTGAGAAGGGTAGCCCAGCAGAGAAGGCGGGTCT
LVRM1_0035_C07.b : CACTGATGGCCACCTGGTCCGGGTGGTTGAGAAGGGTAGCCCAGCAGAGAAGGCGGGTCT
20110601C-013233 : GCAGGATGGAGACAGAGTTCTCAGGATCAATGGTGTCTTTGTGGACAAGAAAGAGCATAT
---------+---------+---------+---------+---------+---------+ 604
ITT01_0008_F09.b : GCAGGATGGAGACAGAGTTCTCAGGATCAATGGTGTCTTTGTGGACAAGAAAGAGCATAT
KDN01_0069_E06.b : GCAGGATGGAGACAGAGTTCTCAGGATCAATGGTGTCTTTGTGGACAAGAAAGAGCATAT
KDN01_0013_H06.b : GCAGGATGGAGACAGAGTTCTCAGGATCAATGGTGTCTTTGTGGACAAGAAAGAGCATAT
KDN01_0014_H06.b : GCAGGATGGAGACAGAGTTCTCAGGATCAATGGTGTCTTTGTGGACAAGAAAGAGCATAT
KDN01_0005_A03.b : GCAGGATGGAGACAGAGTTCTCAGGATCAATGGTGTCTTTGTGGACAAGAAAGAGCATAT
LVRM1_0035_C07.b : GCAGGATGGAGACAGAGTTCTCAGGATCAATGGTGTCTTTGTGGACAAGAAAGAGCATAT
20110601C-013233 : GCAGGTTGTGGATCTGGTCAGAAAGAGTGGGAATTCAGTGACTTTACTAGTTCTGGATGG
---------+---------+---------+---------+---------+---------+ 664
ITT01_0008_F09.b : GCAGGTTGTGGATCTGGTCAGAAAGAGTGGGAATTCAGTGACTTTACTAGTTCTGGATGG
KDN01_0069_E06.b : GCAGGTTGTGGATCTGGTCAGAAAGAGTGGGAATTCAGTGACTTTACTAGTTCTGGATGG
KDN01_0013_H06.b : GCAGGTTGTGGATCTGGTCAGAAAGAGTGGGAATTCAGTGACTTTACTAGTTCTGGATGG
KDN01_0014_H06.b : GCAGGTTGTGGATCTGGTCAGAAAGAGTGGGAATTCAGTGACTTTACTAGTTCTGGATGG
KDN01_0005_A03.b : GCAGGTTGTGGATCTGGTCAGAAAGAGTGGGAATTCAGTGACTTTACTAGTTCTGGATGG
LVRM1_0035_C07.b : GCAGGTTGTGGATCTGGTCAGAAAGAGTGGGAATTCAGTGACTTTACTAGTTCTGGATGG
20110601C-013233 : GGATTCCTATGAGAAAGCCATGAAAAAGCAAGTAGATTTGAAAGAGTTGGGTCAAAGCCA
---------+---------+---------+---------+---------+---------+ 724
ITT01_0008_F09.b : GGATTCCTATGAGAAAGCCATGAAAAAGCAAGTAGATTTGAAAGAGTTGGGTCAAAGCCA
KDN01_0069_E06.b : GGATTCCTATGAGAAAGCCATGAAAAAGCAAGTAGATTTGAAAGAGTTGGGTCAAAGCCA
KDN01_0013_H06.b : GGATTCCTATGAGAAAGCCATGAAAAAGCAAGTAGATTTGAAAGAGTTGGGTCAAAGCCA
KDN01_0014_H06.b : GGATTCCTATGAGAAAGCCATGAAAAAGCAAGTAGATTTGAAAGAGTTGGGTCAAAGCCA
KDN01_0005_A03.b : GGATTCCTATGAGAAAGCCATGAAAAAGCAAGTAGATTTGAAAGAGTTGGGTCAAAGTCA
LVRM1_0035_C07.b : GGATTCCTATGAGAAAGCCATGAAAAAGCAAGTAGATTTGAAAGAGTTGGGTCAAAGTCA
20110601C-013233 : GGAGTCGAGTTTGAATGATAAGAAACTACCTTCTGTGATGAATGGAGGAGCACAGACTTG
---------+---------+---------+---------+---------+---------+ 784
ITT01_0008_F09.b : GGAGTCGAGTTTGAATGATAAGAAACTACCTTCTGTGATGAATGGAGGAGCACAGACTTG
KDN01_0069_E06.b : GGAGTCGAGTTTGAATGATAAGAAACTACCTTCTGTGATGAATGGAGGAGCACAGACTTG
KDN01_0013_H06.b : GGAGTCGAGTTTGAATGATAAGAAACTACCTTCTGTGATGAATGGAGGAGCACAGACTTG
KDN01_0014_H06.b : GGAGTCGAGTTTGAATGATAAGAAACTACCTTCTGTGATGAATGGAGGAGCACAGACTTG
KDN01_0005_A03.b : GGAGTCGAGTTTGAATGATAAGAAACTACCTTCTGTGATGAATGGAGGAGCACAGACTTG
LVRM1_0035_C07.b : GGAGTCGAGTTTGAATGATAAGAAACTACCTTCTGTGATGAATGGAGGAGCACAGACTTG
20110601C-013233 : GACCCAGCCACGGCTCTGCTACCTGGTGAAGGAGGGGAGTAGCTATGGCTTTTCTCTGAA
---------+---------+---------+---------+---------+---------+ 844
ITT01_0008_F09.b : GACCCAGCCACGGCTCTGCTACCTGGTGAAGGAGGGGAGTAGCTATGGCTTTTCTCTGAA
KDN01_0069_E06.b : GACCCAGCCACGGCTCTGCTACCTGGTGAAGGAGGGGAGTAGCTATGGCTTTTCTCTGAA
KDN01_0013_H06.b : GACCCAGCCACGGCTCTGCTACCTGGTGAAGGAGGGGAGTAGCTATGGCTTTTCTCTGAA
KDN01_0014_H06.b : GACCCAGCCACGGCTCTGCTACCTGGTGAAGGAGGGGAGTAGCTATGGCTTTTCTCTGAA
KDN01_0005_A03.b : GACCCAGCCACGGCTCTGCTACCTGGTGAAGGAGGGGAGTAGCTATGGCTTTTCTCTGAA
LVRM1_0035_C07.b : GACCCAGCCACGGCTCTGCTACCTGGTGAAGGAGGGGAGTAGCTATGGCTTTTCTCTGAA
20110601C-013233 : AACTGTCCAAGATAAAAAGGGAGTGTACATGACTGATATAAAGCCTCAAGGTGTGGCTAT
---------+---------+---------+---------+---------+---------+ 904
ITT01_0008_F09.b : AACTGTCCCAGAATAAAAGGGAGTGTACATGACTGATATAAAGCCTC*AGGTGTGGCTAT
KDN01_0069_E06.b : AACTGTCCAAGATAAAAAGGGAGTGTACATGACTGATATAAAGCCTCAAGGTGTGGCTAT
KDN01_0013_H06.b : AACTGTCCAAGATAAAAAGGGAGTGTACATGACTGATATAAAGCCTCAAGGTGTGGCTAT
KDN01_0014_H06.b : AACTGTCCAAGATAAAAAGGGAGTGTACATGACTGATATAAAGCCTCAAGGTGTGGCTAT
KDN01_0005_A03.b : AACTGTCCAAGATAAAAAGGGAGTGTACATGACTGATATAAAGCCTCAAGGTGTGGCTAT
LVRM1_0035_C07.b : AACTGTCCAAGATAAAAAGGGAGTGTACATGACTGATATAAAGCCTCAAGGTGTGGCTAT
20110601C-013233 : GAAAGCTGGAGTCCTGGCTGATGATCACTTGATTGAAGTGAATGGGGAGAATGTAGAAGA
---------+---------+---------+---------+---------+---------+ 964
ITT01_0008_F09.b : GAAAGCTGGAGTCCTGGCTGATGATCACTTGATTGAAGTGAATGGGGGAGATGTAGAAGA
KDN01_0069_E06.b : GAAAGCTGGAGTCCTGGCTGATGATCACTTGATTGAAGTGAATGGGGAGAATGTAGAAGA
KDN01_0013_H06.b : GAAAGCTGGAGTCCTGGCTGATGATCACTTGATTGAAGTGAATGGGGAGAATGTAGAAGA
KDN01_0014_H06.b : GAAAGCTGGAGTCCTGGCTGATGATCACTTGATTGAAGTGAATGGGGAGAATGTAGAAGA
KDN01_0005_A03.b : GAAAGCTGGAGTCCTGGCTGATGATCACTTGATTGAAGTGAATGGGGAGAATGTAGAAGA
LVRM1_0035_C07.b : GAAAGCTGGAGTCCTGGCTGATGATCACTTGATTGAAGTGAATGGGGAGAATGTAGAAGA
20110601C-013233 : TGCCAGCCATGAGGAGGTGGTTGAAAAGGTGAAGAAGTCCGGAAGCCGTGTTATGTTCCT
---------+---------+---------+---------+---------+---------+ 1024
ITT01_0008_F09.b : TGCCTAGCATGAGGAAGTGGTTG*AAAGGTGAAGA*GTCCGGAAGCCGTGTTATGTTCCT
KDN01_0069_E06.b : TGCCAGCCATGAGGAGGTGGTTGAAAAGGTGAAGAAGTCCGGAAGCCGTGTTATGTTCCT
KDN01_0013_H06.b : TGCCAGCCATGAGGAGGTGGTTGANNAGGTGAAGAAGTCCGGAAGCCGTGTTATGTTCCT
KDN01_0014_H06.b : TGCCAGCCATGAGGAGGTGGTTGAAAAGGTGAAGAAGTCCGGAAGCCGTGTTATGTTCCT
KDN01_0005_A03.b : TGCCAGCCATGAGGAGGTGGTTGAAAAGGTGAAGAAGTCCGGAAGCCGTGTTATGTTCCT
LVRM1_0035_C07.b : TGCCAGCCATGAGGAGGTGGTTGAAAAGGTGAAGAAGTCCGGAAGCCGTGTTATGTTCCT
20110601C-013233 : GCTGGTGGACAAGGAAACTGACAAGTACCATAGTGAGCAGAAGATAAAAGTCAAGAGAGA
---------+---------+---------+---------+---------+---------+ 1084
ITT01_0008_F09.b : GCTGGTGGnacagaaactgancagtacatantgagccaaagataaaatcaanaagaaaca
KDN01_0069_E06.b : GCTGGTGGACAAGGAAACTGACAAGTACCATAGTGAGCAGAAGATAAAAGTCAAGAGAGA
KDN01_0013_H06.b : GCTGGTGGACAAGGGAACTGACAAGTACCATAGTGAGCAGAAAGATANAGTCAAGAGAGA
KDN01_0014_H06.b : GCTGGTGGACAAGGGAACTGACAAGTACCATAGTGAGCAGAAGATAAAAGTNCAGAGAGA
KDN01_0005_A03.b : GCTAGTGGACAAGGAAACTGACAAGTACCATAGTGAGCAGAAGATAAAAGTNCAGAGAGA
LVRM1_0035_C07.b : GCTAGTGGACAANGAAACTGACAAGTACAATAGTGAGCAGAAGATAAAAGTCAA
20110601C-013233 : AACAGCCAGTTTGAAACTGCTACCCCACCAGCCTCGGATTGTGGAGATGAAGAAGGGGAG
---------+---------+---------+---------+---------+---------+ 1144
ITT01_0008_F09.b : gccagttgaactgctaacccaccgcctccgatgtgaaaataaaaagggaccattggtagg
KDN01_0069_E06.b : AACAGCCAGTTTGAAACTGCTACCCCACCAGCCTCGGATTGTGGAGATGAAGAAGGGGAG
KDN01_0013_H06.b : AACAGCCAGTTTGAAACTGCTACCCCACCAGCCTCGGAATGTGGAGATGAAGAAGGGGAG
KDN01_0014_H06.b : AACAGCCAGTTTGAAACTGCTACCCCACCAGCCTCGGGATGTGGAGATGAAGAAGGGGGA
KDN01_0005_A03.b : AACAGCCAGTTTGAAACTGCTACCCCACCAGCCTCGGAATGTGGAGATGAAGAAGGGGAG
LVRM1_0035_C07.b :
20110601C-013233 : CAATGGCTATGGTTTCTATTTGAGGGCAGGCCCAGAACAGAAAGGTCAAATTGTCA*GGA
---------+---------+---------+---------+---------+---------+ 1203
ITT01_0008_F09.b : gtttcattgaggccggcccaaccaaagtcaatggtcaggaataaatcccaattcccccaa
KDN01_0069_E06.b : CAATGGCTATGGTTTCTATTTGAGGGCAAGCCCAGAACAGAAAGGTCAAATTGTCAAGGA
KDN01_0013_H06.b : CAATGCCTATGGTTTCTATTTGAGGGaggcccaaaacagaaggtcaaattgtcaaggact
KDN01_0014_H06.b : GCATGGCTATGGTTTCTATTTGAGGGCAGGCCCAGAACAGAAAGGTCAATTGGTCA*GGA
KDN01_0005_A03.b : CAATGGCTATGGTTTCTATTTGAGGGCAGGCCCAGAACAGA*AGGTCAAATTGTCA*GGA
LVRM1_0035_C07.b :
20110601C-013233 : CATAGATTCCAGAAGTCCAGCAGAAGAAGGTGGGCTGAAGAACAATGACCTGGTGGTTGC
---------+---------+---------+---------+---------+---------+ 1263
ITT01_0008_F09.b : aaggggctttaaaaaaaacctgggtgtcttaagccaagggggaaccccacttacagtggg
KDN01_0069_E06.b : CATAGATTCCAGAAGTCCAGCAGAAGAAGGTGGGCTGAAGAACAATGACCTGGTGGTTGC
KDN01_0013_H06.b : agattcagaagtcagcaaagaggctggctggagaacatggactgggggtgctgtcatggc
KDN01_0014_H06.b : CATAGATTCCAGAAGTCCAGCAaagaggctggcttgagaacatgacctgggggtgctgtc
KDN01_0005_A03.b : CATAGATTCCAGAAGTCagcaaaagaagctggcttgaagacaatgacctggtggtgctgt
LVRM1_0035_C07.b :
20110601C-013233 : TGTCAATGGCGAGTGTGGGGATCCCCTCGATCATGACAGTGTGGTGGGAATGATTA....
---------+---------+---------+---------+---------+---------+ 1319
ITT01_0008_F09.b : gaaaataaaaagggaaaacacccttttgggaaaaaaaaaacaatttaatt
KDN01_0069_E06.b : TGTCAATGGCGAGTGTGGGGATCCCCTCGATCATGACAGTGTGGTGGGAATGATTAnaaa
KDN01_0013_H06.b : aagggggggagtcctcgatctgacagggggggaaatgataaaagggtggaaacaaaatct
KDN01_0014_H06.b : atggcnaggggtggagtcctcgatctgaaagggggtggaatgataaaaaggtgagatcga
KDN01_0005_A03.b : caatgccaatgtgtggaatcctcgatcatgacgtgtggtgaaatgattaaaagggtggaa
LVRM1_0035_C07.b :
20110601C-013233 : ............................................................
---------+---------+---------+---------+---------+---------+ 1319
ITT01_0008_F09.b :
KDN01_0069_E06.b : ggtggagatcagacctcattgttggtggtgaacaagaaaccggaaacatgtataactggc
KDN01_0013_H06.b : tgttgtggtaacaagaaagggaaaggtatacggggcgattccccttttcaaatacaagca
KDN01_0014_H06.b : ctcatggtggggtaaaaagaaaggaaaaggataaaggggccgaatctcttttctaaaaca
KDN01_0005_A03.b : tcaaattcattgttggtggggacaagaaacagacactggaaaaacggccccgattcccct
LVRM1_0035_C07.b :
20110601C-013233 : ............................................................
---------+---------+---------+---------+---------+---------+ 1319
ITT01_0008_F09.b :
KDN01_0069_E06.b : tcgaattcctcttttcccaacaacaaagtcaaaactggccaagggtctgtcacggaagcc
KDN01_0013_H06.b : aaaggccaaggtttttaggaagcctggccggcccttggagtccagtccaactcagggagg
KDN01_0014_H06.b : attaaacggccaggttggccggggccgggccggccttggaggccgtccacacagaggagg
KDN01_0005_A03.b : tttcctacatcaatcaaaaatgcccatggtctgtcggaagggctggctccgcccctggaa
LVRM1_0035_C07.b :
20110601C-013233 : ............................................................
---------+---------+---------+---------+---------+---------+ 1319
ITT01_0008_F09.b :
KDN01_0069_E06.b : ctggtcctggtctctggaggttccgtccaaacctacgaggaagggggaaataaaacccaa
KDN01_0013_H06.b : ggaaatttaactaaccgcgcgggtaaggaaagggtagtttcttaaggattcggaccccct
KDN01_0014_H06.b : ggaacaaccaccccgcgggtaaggaaaagttagtttttaaggtatgggcccccccttaaa
KDN01_0005_A03.b : ggcccgtcaaaacctcaaggatgggaaataaaccaacctccggctgtaaaggaaaaggtt
LVRM1_0035_C07.b :
20110601C-013233 : ............................................................
---------+---------+---------+---------+---------+---------+ 1319
ITT01_0008_F09.b :
KDN01_0069_E06.b : ccttgcggttgtataggggaaaaggtaggctttcctaaaggcattcgggcacccagctct
KDN01_0013_H06.b : ctctaaagaaaagggcccacaggtggtgggaaggctctttggggggtgggcccaaagggg
KDN01_0014_H06.b : gaaaaggcccaacggggggggaagccttttgaagggggtgggcttagggagaaaagggga
KDN01_0005_A03.b : ggtttccttaaggaattgggacccaacccttcaaaaagaaaaagggcccctacctgcggg
LVRM1_0035_C07.b :
20110601C-013233 : ............................................................
---------+---------+---------+---------+---------+---------+ 1319
ITT01_0008_F09.b :
KDN01_0069_E06.b : tttcaaaagaaaaaaggcgccacctaacgggtggggggaaagacttcttttagagagagg
KDN01_0013_H06.b : aaaaagggggccccgtgaaggaatgaaaaattttgttctcccttaggggagtcaaatttt
KDN01_0014_H06.b : ccctggaagaattaaatttttttctccctaaggaaccaaaactctattttttt
KDN01_0005_A03.b : ggaaaagacccctttaagaagggggttggggaacctcaaaggggaaaaccaaggggaaat
LVRM1_0035_C07.b :
20110601C-013233 : ............................................................
---------+---------+---------+---------+---------+---------+ 1319
ITT01_0008_F09.b :
KDN01_0069_E06.b : aagtggtggaccctagaaggggggaacacaagggaaaatgcccctcttggagg
KDN01_0013_H06.b : cagatgtt
KDN01_0014_H06.b :
KDN01_0005_A03.b : tgccctctgaaaaggattattcgaaaactttttctgtccataaccctttaaaggggaaaa
LVRM1_0035_C07.b :
20110601C-013233 : ............................................................
---------+---------+---------+---------+---------+---------+ 1319
ITT01_0008_F09.b :
KDN01_0069_E06.b :
KDN01_0013_H06.b :
KDN01_0014_H06.b :
KDN01_0005_A03.b : atccccaaaaaaccccccttctaaagaaagagtgggtgtggt
LVRM1_0035_C07.b :
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