[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-014719
Length:
925
Sequence:
[FASTA format sequence]
TTTTTCCTTC CGCAGGCCCA CCGGTGATCA GCTGGTCTGC GCTCCTCTGA CGTGAGCCTG
GGCACGTCAC CGCCGAATGG CAGCCTCCAG AAAGGCACCG CGAGTAAGGG CAAATTACCA
GGATTTTCAG CTGAAGAATT TAAGAATAAT TGAACCTAAC GAGGTGACAC GTTCAGGATA
CCCAGGTGTA GGAACAGACG GCAGAATGGC TCCAAAGGTA ACTTCAGAGC TGCTTCGGCA
GCTGAGACAA GCCATGAAGA ACTTGGAGTA TGTGACAGAA CCAATCCAGG CCTACATCAT
CCCATCGGGA GACGCCCACC AGAGTGAGTA CATTGCTCCA TGTGATTGTC GGCGGGCCTT
CGTCTCTGGA TTCGATGGCT CTGCAGGCAC AGCCATCATC ACAGAAGAGC ACGCGGCCAT
GTGGACAGAT GGGCGTTACT TTCTCCAGGC TGCCAAGCAG ATGGACAGCA ACTGGACACT
CATGAAGATG GGTCTGAAGG ACACACCAAC TCAGGAAGAC TGGCTGGTGA GTGTACTTCC
TGAAGGATCC AGGGTTGGTG TGGACCCATT GATCATTCCT ACAGATTACT GGAAGAAGAT
GGCCAAGGTT CTGAGAAGCG CTGGCCACCA CCTTGTTCCT GTCAAGGAGA ACCTTGTGGA
CAAGATCTGG ACAGACCGCC CTGAGCGTCC GTGCAAGCCC CTCCTCACCC TGGGCCTGGA
TTACACAGGC ATCTCCTGGA AAGACAAGGT TGCAGACCTT CGGTTGAAAA TGGCCGAGAG
GAATGTCGTG TGGTTTGTGG TCACTGCCCT GGATGAGATT GCGTGGCTCC TTCATCTCCG
AGGATCAGAT GTGGAGCACA ATCCGGTATT TTTCTCCTAT GCCATCATAG GACTAGAAAC
AATCATGCTC TTCATTGACG GTGAC
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | XPNPEP1 | xaa-Pro aminopeptidase 1 isoform 2 [Homo sapiens]. | 550 | e-157 | O |
![]() |
![]() | XPNPEP1 | xaa-Pro aminopeptidase 1 isoform 1 [Homo sapiens]. | 550 | e-157 | O |
![]() |
![]() | XPNPEP2 | xaa-Pro aminopeptidase 2 precursor [Homo sapiens]. | 185 | 6e-47 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | Xpnpep1 | xaa-Pro aminopeptidase 1 [Mus musculus]. | 478 | e-135 | O |
![]() |
![]() | Xpnpep2 | X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound isoform 1 [Mus musculus]. | 185 | 5e-47 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | LOC486880 | PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1, soluble isoform 1 [Canis familiaris]. | 485 | e-137 | O |
![]() |
![]() | LOC486880 | PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1, soluble isoform 4 [Canis familiaris]. | 447 | e-126 | O |
![]() |
![]() | LOC486880 | PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1, soluble isoform 3 [Canis familiaris]. | 296 | 2e-80 | O |
![]() |
![]() | LOC492124 | PREDICTED: similar to Xaa-Pro aminopeptidase 2 precursor (X-Pro aminopeptidase 2) (Membrane-bound aminopeptidase P) (Membrane-bound APP) (Membrane-bound AmP) (mAmP) (Aminoacylproline aminopeptidase) [Canis familiaris]. | 187 | 1e-47 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | XPNPEP1 | xaa-Pro aminopeptidase 1 [Bos taurus]. | 485 | e-137 | O |
![]() |
![]() | XPNPEP2 | xaa-Pro aminopeptidase 2 [Bos taurus]. | 191 | 8e-49 | O |
![]() |
![]() | XPNPEP2 | PREDICTED: X-prolyl aminopeptidase 2, membrane-bound-like [Bos taurus]. | 191 | 8e-49 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | XPNPEP2 | xaa-Pro aminopeptidase 2 precursor [Sus scrofa]. | 187 | 5e-48 | O |
|
|
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0082_G03.b : ttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0089_B01.b : taattgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SKNB1_0097_D02.b :
THY01_0011_C05.b : ctttttttttcttttttttctctttcttttcctttttcctctcctcctcccctagctxxx
PBL01_0033_A08.b :
20110601C-014719 : ..........TTTTTCCTTCCGCAGGCCCACCGGTGATCAGCTGGTCTGCGCTCCTCTGA
---------+---------+---------+---------+---------+---------+ 50
LVRM1_0082_G03.b : xxxxxxxxxxTTTTTCCTTCCGCAGGCCCACCGGTGATCAGCTGGTCTGCGCTCCTCTGA
OVRM1_0089_B01.b : xxxxxxxxxxxcTTTCCTTCCGCAGGCCCACCGGTGATCAGCTGGTCTGCGCTCCTCTGA
SKNB1_0097_D02.b : nncccctcgcgctggctctgttcgcggcccCCGGTGATCAGCTGGTCTGCGCTCCTCTGA
THY01_0011_C05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0033_A08.b : atgaacaxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-014719 : CGTGAGCCTGGGCACGTCACCGCCGAATGGCAGCCTCCAGAAAGGCACCGCGAGTAAGGG
---------+---------+---------+---------+---------+---------+ 110
LVRM1_0082_G03.b : CGTGAGCCTGGGCACGTCACCGCCGAATGGCAGCCTCCAGAAAGGCACCGCGAGTAAGGG
OVRM1_0089_B01.b : CGTGAGCCTGGGCACGTCACCGCCGAATGGCAGCCTCCAGAAAGGCACCGCGAGTAAGGG
SKNB1_0097_D02.b : CGTGAGCCTGGGCACGTCACCGCCGAATGGCAGCCTCCAGAAAGGCACCGCGAGTAAGGG
THY01_0011_C05.b : xxxxxxxxxxxxxxxxxxxCCGCCGAATGGCAGCCTCCAGAAAGGCACCGCGAGTAAGGG
PBL01_0033_A08.b : xxxxxxxxxxxxxxxxxxxCCGCCGAATGGCAGCCTCCAGAAAGGCACCGCGAGTAAGGG
20110601C-014719 : CAAATTACCAGGATTTTCAGCTGAAGAATTTAAGAATAATTGAACCTAACGAGGTGACAC
---------+---------+---------+---------+---------+---------+ 170
LVRM1_0082_G03.b : CAAATTACCAGGATTTTCAGCTGAAGAATTTAAGAATAATTGAACCTAACGAGGTGAAAC
OVRM1_0089_B01.b : CAAATTACCAGGATTTTCAGCTGAAGAATTTAAGAATAATTGAACCTAACGAGGTGAAAC
SKNB1_0097_D02.b : CAAATTACCAGGATTTTCAGCTGAAGAATTTAAGAATAATTGAACCTAACGAGGTGACAC
THY01_0011_C05.b : CAAATTACCAGGATTTTCAGCTGAAGAATTTAAGAATAATTGAACCTAACGAGGTGACAC
PBL01_0033_A08.b : CAAATTACCAGGATTTTCAGCTGAAGAATTTAAGAATAATTGAACCTAACGAGGTGACAC
20110601C-014719 : GTTCAGGATACCCAGGTGTAGGAACAGACGGCAGAATGGCTCCAAAGGTAACTTCAGAGC
---------+---------+---------+---------+---------+---------+ 230
LVRM1_0082_G03.b : GTTCAGGATACCCAGGTGTAGAAACAGACGGCAGAATGGCTCCAAAGGTAACTTCAGAGC
OVRM1_0089_B01.b : GTTCAGGATACCCAGGTGTAGAAACAGACGGCAGAATGGCTCCAAAGGTAACTTCAGAGC
SKNB1_0097_D02.b : GTTCAGGATACCCAGGTGTAGGAACAGACGGCAGAATGGCTCCCAAGGTAACTTCAGAGC
THY01_0011_C05.b : GTTCAGGATACCCAGGTGTAGGAACAGACGGCAGAATGGCTCCCAAGGTAACTTCAGAGC
PBL01_0033_A08.b : GTTCAGGATACCCAGGTGTAGGAACAGACGGCAGAATGGCTCCAAAGGTAACTTCAGAGC
20110601C-014719 : TGCTTCGGCAGCTGAGACAAGCCATGAAGAACTTGGAGTATGTGACAGAACCAATCCAGG
---------+---------+---------+---------+---------+---------+ 290
LVRM1_0082_G03.b : TGCTTCGGCAGCTGAGACAAGCCATGAGGAACTTGGAGTATGTGACAGAACCAATCCAGG
OVRM1_0089_B01.b : TGCTTCGGCAGCTGAGACAAGCCATGAAGAACTTGGAGTATGTGACAGAACCAATCCAGG
SKNB1_0097_D02.b : TGCTTCGGCAGCTGAGACAAGCCATGAAGAACTTGGAGTATGTGACAGAACCAATCCAGG
THY01_0011_C05.b : TGCTTCGGCAGCTGAGACAAGCCATGAAGAACTTGGAGTATGTGACAGTACCAATCCAGG
PBL01_0033_A08.b : TGCTTCGGCAGCTGAGACAAGCCATGAAGAACTTGGAGTATGTGACAGAACCAATCCAGG
20110601C-014719 : CCTACATCATCCCATCGGGAGACGCCCACCAGAGTGAGTACATTGCTCCATGTGATTGTC
---------+---------+---------+---------+---------+---------+ 350
LVRM1_0082_G03.b : CCTACATCATCCCATCGGGAGACGCCCACCAGAGTGAGTACATTGCTCCATGTGATTGTC
OVRM1_0089_B01.b : CCTACATCATCCCATCGGGAGACGCCCACCAGAGTGAGTACATTGCTCCATGTGATTGTC
SKNB1_0097_D02.b : CCTACATCATCCCATCGGGAGACGCCCACCAGAGTGAGTACATTGCTCCATGTGATTGTC
THY01_0011_C05.b : CCTACATCATCCCATCGGGAGACGCCCACCAGAGTGAGTACATTGCTCCATGTGATTGTC
PBL01_0033_A08.b : CCTACATCATCCCATCGGGAGACGCCCACCAGAGTGAGTACATTGCTCCATGTGATTGTC
20110601C-014719 : GGCGGGCCTTCGTCTCTGGATTCGATGGCTCTGCAGGCACAGCCATCATCACAGAAGAGC
---------+---------+---------+---------+---------+---------+ 410
LVRM1_0082_G03.b : GGCGGGCCTTCGTCTCTGGATTCGATGGCTCTGCAGGCACAGCCATCATCACAGAAGAGC
OVRM1_0089_B01.b : GGCGGGCCTTCGTCTCTGGATTCGATGGCTCTGCAGGCACAGCCATCATCACAGAAGAGC
SKNB1_0097_D02.b : GGCGGGCCTTCGTCTCTGGATTCGATGGCTCTGCAGGCACAGCCATCATCACAGAAGAGC
THY01_0011_C05.b : GGCGGGCCTTCGTCTCTGGATTCGATGGCTCTGCAGGCACAGCCATCATCACACAAGAGC
PBL01_0033_A08.b : GGCGGGCCTTCGTCTCTGGATTCGATGGCTCTGCAGGCACAGCCATCATCACAGAAGAGC
20110601C-014719 : ACGCGGCCATGTGGACAGAT*GGGCGTTACTTTCTCCAGGCTGCCAAGCAGATGGACAGC
---------+---------+---------+---------+---------+---------+ 469
LVRM1_0082_G03.b : ACGCGGCCATGTGGACAGAT*GGGCGTTACTTTCTCCAGGCTGCCAAGCAGATGGACAGC
OVRM1_0089_B01.b : ACGCGGCCATGTGGACAGAT*GGGCGTTACTTTCTCCAGGCTGCCAAGCAGATGGACAGC
SKNB1_0097_D02.b : ACGCGGCCATGTGGACAGAT*GGGCGTTACTTTCTCCAGGCTGCCAAGCAGATGGACAGC
THY01_0011_C05.b : ACGCGGACATGTGGACAGATCGGGCGTTACTTTCTCCAGGCTGCCAAGCAGATGGACAGC
PBL01_0033_A08.b : ACGCGGCCATGTGGACAGAT*GGGCGTTACTTTCTCCAGGCTGCCAAGCAGATGGACAGC
20110601C-014719 : AACTGGACACTCATGAAGATGGGTCTGAAGGACACACCAACTCAGGAAGACTGGCTGGTG
---------+---------+---------+---------+---------+---------+ 529
LVRM1_0082_G03.b : AACTGGACACTCATGAAGATGGGTCTGAAGGACACACCAACTCAGGAAGACTGGCTGGTG
OVRM1_0089_B01.b : AACTGGACACTCATGAAGATGGGTCTGAAGGACACACCAACTCAGGAAGACTGGCTGGTG
SKNB1_0097_D02.b : AACTGGACACTCATGAAGATGGGTCTGAAGGACACACCAACTCAGGAAGACTGGCTGGTG
THY01_0011_C05.b : AACTGGACACTCATGAAGATGGGTCTGAAGGACACACCAACTCAGGAAGACTGGCTGGTG
PBL01_0033_A08.b : AACTGGACACTCATGAAGATGGGTCTGAAGGACACACCAACTCAGGAAGACTGGCTGGTG
20110601C-014719 : AGTGTACTTCCTGAAGGATCCAGGGTTGGTGTGGACCCATTGATCATTCCTACAGATTAC
---------+---------+---------+---------+---------+---------+ 589
LVRM1_0082_G03.b : AGTGTACTTCCTGAAGGATCCAGGGTTGGTGTGGACCCATTGATCATTCCTACAGATTAC
OVRM1_0089_B01.b : AGTGTACTTCCTGAAGGATCCAGGGTTGGTGTGGACCCATTGATCATTCCTACAGATTAC
SKNB1_0097_D02.b : AGTGTACTTCCTGAAGGATCCAGGGTTGGTGTGGACCCATTGATCATTCCTACAGATTAC
THY01_0011_C05.b : AGTGTACTTCCTGAACGATCCAGGGTTGGTGTGGACCCATTGATCATTCCTACACATTAC
PBL01_0033_A08.b : AGTGTACTTCCTGAAGGATCCAGGGTTGGTGTGGACCCATTGATCATTCCTACAGATTAC
20110601C-014719 : TGGAAGAAGATGGCCAAGG*TTCTGAGAAGCGCTGGCCACCACCTTGTTCCTGTCAAGGA
---------+---------+---------+---------+---------+---------+ 648
LVRM1_0082_G03.b : TGGAAGAAGATGGCCAAGG*TTCTGAGAAGCGCTGGCCACCACCTTGTTCCTGTCAAGGA
OVRM1_0089_B01.b : TGGGAGAAGATGGCCAAGG*TTCTGAGAAGCGCTGGCCACCACCTTGTTCCTGTCAAGGA
SKNB1_0097_D02.b : TGGAAGAAGATGGCCAAGG*TTCTGAGAAGCGCTGGCCACCACCTTGTTCCTGTCAAGGA
THY01_0011_C05.b : TGGAAGAAGATGGCCAAGGCTCCTGAGAAGCGCTGGCCACCATCTTGTTCCTGTCAAGGA
PBL01_0033_A08.b : TGGAAGAAGATGGCCAAGG*TTCTGAGAAGCGCTGGCCACCACCTTGTTCCTGTCAAGGA
20110601C-014719 : GAACCTTGTGGACAAGATCTGGACAGACCGCCCTGAGCGTCCGTGCAAGCCCCTCCTCAC
---------+---------+---------+---------+---------+---------+ 708
LVRM1_0082_G03.b : GAACCTTGTGGACAAGATCTGGACAGACCGCCCTGAGCGTCCGTGCAAGCCCCtcctcac
OVRM1_0089_B01.b : GAACCTTGTGGANCAGATCTGGACAGACCGCCCTGAGCGTCCGTGNCAGCCCCTCCTCAC
SKNB1_0097_D02.b : GAACCTTGTGGACAAGATCTGGACAGACCGCCCTGAGCGTCCGTGCAAGCCCCTCCTCAC
THY01_0011_C05.b : GAACCTTGTGGACCAGACCTGGACAGATCGTCCTGAGCGTCCGTGCAAGCCCtttcccca
PBL01_0033_A08.b : GAACCTTGTGGNACAGATCTGGACAGACCGCCCTGAGCGTCCGTGCAAGCCCCCTCCTCA
20110601C-014719 : CCTGGGCCTGGATTACACAGGCATCTCCTGGAAAGACAAGGTTGCAGACCTTCGGTTGAA
---------+---------+---------+---------+---------+---------+ 768
LVRM1_0082_G03.b : cctgggcctggattacac
OVRM1_0089_B01.b : CCTGGGCCTggganacacaggcatctcctgggaagacaaggttgcagac
SKNB1_0097_D02.b : CCTGGGCCTGGATTACACAGGCATCTCCTGGAAAGACAAGGTTGCAGACCTTCGGTTGAA
THY01_0011_C05.b : ctcgggtcccggattacccagcgctcccccgcgaagactaggtttgccaactttcggtcc
PBL01_0033_A08.b : CCTGNGCCTGGATTACACANGCATCTCCTGNAAAGACAAGGTTGCAGACCTTCGGTTTGA
20110601C-014719 : AATGG*CCGAGAGGAATGTCGTGTGGTTTGTGGTCACTGCCCTGGATGAGATTGCGTGGC
---------+---------+---------+---------+---------+---------+ 827
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : AATGG*CCGAGAGGAATGTCGTGTGGTTTGTGGTCACTGCCCTGGATGAGATTGCGTGGC
THY01_0011_C05.b : gaaatggccgcaaagaatggctcgtgcgttcgtggccactgccctgtacgacatgcctcg
PBL01_0033_A08.b : AATGGGCCAANANGAATGTCNTGTGGTTTGTGGTCACTGCCCTGAATGAGATTGCGTGGC
20110601C-014719 : TCCTTCATCTCCGAGGATCAGATGTGGAGCACAATCCGGTATTTTTCTCCTATGCCATCA
---------+---------+---------+---------+---------+---------+ 887
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : TCCTTCATCTCCGAGGATCAGATGTGGAGCACAATCCGGTATTTTTCTCCTATGCAATCA
THY01_0011_C05.b : gttttccactcccccagactcaattcggagccctatccgcccctctcccccttgcaacct
PBL01_0033_A08.b : TCTTTCATCTCCGAGGATCAGATGTGGAGCACAATCGGGTATTTTTCTCCTAATGCATCC
20110601C-014719 : TAGGACTAGAAACAATCATGCTCTTCATTGACGGTGAC......................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : TAGGACTAGAAACAATCATGCTCTTCATTGACGGTGACcgcatagacacccccagtggtn
THY01_0011_C05.b : cactcttacaacttcccatgtccctccttgtcccgag
PBL01_0033_A08.b : TAGGACTAGAAACAATCATGCTCTTCATTGACGGTGgacgcataaacaccccccttgtta
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : aggaacacctgcttttttgactgggccctggagcccgatacagaatcaggtgcttcccct
THY01_0011_C05.b :
PBL01_0033_A08.b : agaaacactgctttttgacttgggcctggaacccattccaaatccagtgcttccctaaag
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : acagtcatcctgagcgagctcaaggtcccgtgtgccagcttcgcccctaggaaagggtgt
THY01_0011_C05.b :
PBL01_0033_A08.b : tccatctgaacaacctaagtcctgtgggcacctgtccccaggaaaaggtgggtcatggaa
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : gggtcagtgacagggcagctagccgtgagcgaggcatccccaaggatcatcgctgctgta
THY01_0011_C05.b :
PBL01_0033_A08.b : agccactttgccggggcaaaccttccaagataaccctgtgtatgccttaaccccttttgt
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : tgcttaaccccctctnatcgcccaagtgggaaaatctgccaatccaaggcgaggcgaccc
THY01_0011_C05.b :
PBL01_0033_A08.b : tgcaaaagggtgaaaatttgccaatcaaaggtgggcgaccccattaaaagcctttccctg
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : aattaaaaggcgtgcctccgggactctaactggggggaaaagggcccaagggggcgtcgg
THY01_0011_C05.b :
PBL01_0033_A08.b : gaaccttaaaggtggaaaaaggtcccaggggggggaaaatttcctcctaaaatgagattc
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : aaatcccgcgcaaaatagaatctccgcgcggggaatttgagggatccccacttctgggga
THY01_0011_C05.b :
PBL01_0033_A08.b : cccggccgggaattttgacgacctccaattttaaggggcaaggccctttttacccccccg
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b : cccgccccttcctccctccgaaaa
THY01_0011_C05.b :
PBL01_0033_A08.b : aaaaaaaactttcgaggagctcttcccggcaaaaggaaaaagtccccttttaccccccaa
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b :
THY01_0011_C05.b :
PBL01_0033_A08.b : aaatttattttggaattgggcttttccacacctttttctttttttttttcaaaagggtta
20110601C-014719 : ............................................................
---------+---------+---------+---------+---------+---------+ 925
LVRM1_0082_G03.b :
OVRM1_0089_B01.b :
SKNB1_0097_D02.b :
THY01_0011_C05.b :
PBL01_0033_A08.b : agaggaatacacagaggaagagagagtt