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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20060611C-001285

Length: 1,279

Sequence [FASTA format sequence]
CTAGCAGGCC CCACGCCGCC GCCACCGCCA CCCGCTGCCT CTGCCTCCGG GGCCTCCGCC
GCTGCGGGGC CACCATGCTC CTGCCCAGGC CTGGAGACTG ACCCCTAAAA CCGGCACCGT
GTCTCAGCTC TGCCCCCACC CGCCGGACCC CAGGGTCCCG CCCCGGCCCA GGAGGTCAGC
CGGGGGATCA TTAACTAGAG GCCGTGACAT GGCGGAGAAA GAGGGTGGCC AGCCTGTGTC
ATGCTGCTCC GGACCCAAGG TGGCAGCTCT CACTGTGGGG ACCGTGCTGC TCCTGACAGG
CATTGGGGCA GCGTCCTGGG CCATTGTGAC CGTTCTACTC AGGAGTGATC AGGAGCCGCT
GTATCCAGTG CAGGTCGGCC CCGGGGATTC TCGGCTCACC GTGTTTGATG AGACGGAGGG
CACGTGGCGC CTGCTGTGCT CCTCGCGCTC CAACGCCAGG GTGGCAGGGC TCAGCTGCGA
GGAGATGGGC TTCCTCAGGT CACTGACCCA CTCAGAGCTG GATGTGCGGA CTGCGGGCGC
CAACGGCACG TCGGGCTTCT TCTGTGTGGA TGAGGGGAGG CTGCCGCAGG CCCGGAGGCT
GCTTGAGGTC CTCTCCGTGT GCGACTGTCC CAGGGGCCAT TTCCTGGCAA CCACATGCCA
AGACTGCGGC CATAGGAAGC TGCCCGTGGA TCGCATTGTG GGCGGTCAGG ACACCAGCCT
GGGCCGGTGG CCGTGGCAAG TCAGTCTTCG CTACGACGGA GCACACCTCT GTGGGGGATC
CCTGCTCTCC AAAGACTGGG TGCTGACAGC CGCCCACTGC TTCCCCGAGC GGAACCGGGT
CCTGTCTCGA TGGCGAGTAT TCGCCGGTGC TGTGGCCCAG ACCTCACCCC ACGGCCTGCA
GATGGGGGTG CAGGCGGTGA TCTACCATGG GGACTATCTC CCCTTTCGAG ACCCCAACAG
CGAGGAGAAC AGCAATGATA TCGCCCTGGT CCACCTCTCC AGCTCCCTGG TCCTCACAGA
ATACATCCAG CCCGTGTGCC TCCCGGCTGC CGGCCAAGCC CTGGTGGACG GCAAGATCTG
CACGGTGACA GGCTGGGGCA ACACGCAGTA CTACGGCCAA CAGGCTGGGG TGCTCCAGGA
GGCCCCGAGT CCCCCATAAT CAGCAATGAT GTCTGCAATG GCCCCGACTT CTACGGAAAC
CAGATCAAAG CCAAGATGTT CTGTGCCCGC TACCCTGAGG GTGGCATTGA CGCCTGCCAG
GGTGACAGTG GTGGCCCCC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinHPNhepsin (transmembrane protease, serine 1)551e-157O
Contig/Assembly ProteinHPNhepsin (transmembrane protease, serine 1)551e-157O
Contig/Assembly ProteinTMPRSS3transmembrane protease, serine 31503e-48O
Contig/Assembly ProteinTMPRSS3transmembrane protease, serine 31403e-45O
Contig/Assembly ProteinTMPRSS3transmembrane protease, serine 31403e-45O
Contig/Assembly ProteinPRSS7protease, serine, 7 (enterokinase)1256e-37
Contig/Assembly ProteinTMPRSS4transmembrane protease, serine 41223e-38O
Contig/Assembly ProteinTMPRSS5transmembrane protease, serine 5 (spinesin)1223e-36O
Contig/Assembly ProteinPRSS8protease, serine, 8 (prostasin)1207e-35O
Contig/Assembly ProteinPRSS27protease, serine 271184e-33O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Members: 11      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LVR010035G01LVR01_0035_G01.bBP446332 
LVR010040C12LVR01_0040_C12.bBP443632 
LVR010050G11LVR01_0050_G11.bBP447094 
LVR010052A05LVR01_0052_A05.bBP441296 
LVR010095D07LVR01_0095_D07.bBP444180 
LVR010104E06LVR01_0104_E06.bBP444995 
LVRM10113C07LVRM1_0113_C07.bBP450137 
LVRM10127D02LVRM1_0127_D02.bBP450649 AK233353
LVRM10182F12LVRM1_0182_F12.bCJ005646 
LVRM10204B10LVRM1_0204_B10.bCJ007331 
OVRM10117G09OVRM1_0117_G09.bBP153303 

  

Alignment:      TOP

20060611C-001285 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0113_C07.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0204_B10.b : xxxxxxxxxxxxxxx
LVRM1_0127_D02.b : nagtttgtcxxxxxxxxxxxx
LVR01_0050_G11.b : gcatttagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0117_G09.b : nagttgtcxxxxxxxxxxx
LVR01_0052_A05.b : ccgcgcggctaaccatgattagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0104_E06.b : gggggtcctggcatagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0040_C12.b : ggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0035_G01.b :
LVRM1_0182_F12.b :
LVR01_0095_D07.b :
20060611C-001285 : .............................CTAGCAGGCCCCACGCCGCCGCCACCGCCAC
---------+---------+---------+---------+---------+---------+ 31
LVRM1_0113_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTAGCAGGCCCCAcgccgccgccaccgccac
LVRM1_0204_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxctagcaggcCCCAcgccgccgccaccgccac
LVRM1_0127_D02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggCCCAcgccgccgccaccgccac
LVR01_0050_G11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgcaggcCCCAcgccgccgccactgccgc
OVRM1_0117_G09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcgccgccgccaccgccac
LVR01_0052_A05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcgccgccgccgccaccgccac
LVR01_0104_E06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtggactggacgccgccgccgccaccgccac
LVR01_0040_C12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxctgccgC
LVR01_0035_G01.b :
LVRM1_0182_F12.b :
LVR01_0095_D07.b :
20060611C-001285 : CCGCTGCCTCTGCCTCCGGGGCCTCCGCCGCTGCGGGGCCACCATGCTCCTGCCCAGGCC
---------+---------+---------+---------+---------+---------+ 91
LVRM1_0113_C07.b : ccgctgcctctgcctccggggcctccgccgctgcGGGGCCACCATGCTCCTGCCCAGGCC
LVRM1_0204_B10.b : ccgctgcctctgcctccggggcctccgccgctgcGGGGCCACCATGCTCCTGCCCAGGCC
LVRM1_0127_D02.b : ccgctgcctctgcctccggggcctccgccgctgcGGGGCCACCGTGCTCCTGCCCAGGCC
LVR01_0050_G11.b : ccgctgcctctgcctccggggcctccgccgctgcGGGGCCACCATGCTCCTGCCCAGGCC
OVRM1_0117_G09.b : ccgctgcctctgcctccggggcctccgccgctgcGGGGCCACCATGCTCCTGCCCAGGCC
LVR01_0052_A05.b : ccgctgcctctgcctccggggcctccgccgctgcGGGGCCACCATGCTCCTGCCCAGGCC
LVR01_0104_E06.b : ccgctgcctctgcctccggggcctccgccgctgcGGGGCCACCATGCTCCTGCCCAGGCC
LVR01_0040_C12.b : CCGCTGCCTCTGCCTCCGGGGCCTCCGCCGCTGCGGGGCCACCATGCTCCTGCCCAGGCC
LVR01_0035_G01.b : gaatcacctta
LVRM1_0182_F12.b : cgttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0095_D07.b :
20060611C-001285 : TGGAGACTGACCCCTAAAACCGGCACCGTGTCTCAGCTCTGCCCCCACCCGCCGGACCCC
---------+---------+---------+---------+---------+---------+ 151
LVRM1_0113_C07.b : TGGAGACTGACCCCTAAAACCGGCACCGTGTCTCAGCTCTGCCCCCACCCGCCGGACCCC
LVRM1_0204_B10.b : TGGAGACTGACCCCTAAAACCGGCACCGTGTCTCAGCTCTGCCCCCACCCGCCGGACCCC
LVRM1_0127_D02.b : TGGAGACTGACCCCTAAAACCGGCACCGTGTCTCAGCTCTGCCCCCACCCGCCGGACCCC
LVR01_0050_G11.b : TGGAGACTGACCCCTAAAACCGGCACCGTGTCTCAGCTCTGCCCCCACCCGCCGGACCCC
OVRM1_0117_G09.b : TGGAGACTGACCCCTAAAACCGGCACCGTGTCTCAGCTCTGCCCCCACCCGCCGGACCCC
LVR01_0052_A05.b : TGGAGACTGACCCCTAAAACCGGCACCGTGTCTCAGCTCTGCCCCCACCCGCCGGACCCC
LVR01_0104_E06.b : TGGAGACTGACCCCTAAAACCGGCACCGTGTCTCAGCTCTGCCCCCACCCGCCGGACCCC
LVR01_0040_C12.b : TGGAGACTGACCCCTAAAACCGGCACCGTGTCTCAGCTCTGCCCCCACCCGCCGGACCCC
LVR01_0035_G01.b : acctttccagtccctacaatcttcggcttggcacttxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0182_F12.b : xxxxxxxxxxxxxxxctagaggccgtgacatggcggagaaagagggtggccagcctgtgt
LVR01_0095_D07.b :
20060611C-001285 : AGGGTCCCGCCCCGGCCCAGGAGGTCAGCCGGGGGATCATTAACTAGAGGCCGTGACATG
---------+---------+---------+---------+---------+---------+ 211
LVRM1_0113_C07.b : AGGGTCCCGCCCCGGCCCAGGAGGTCAGCCGGGGGATCATTAACTAGAGGCCGTGACATG
LVRM1_0204_B10.b : AGGGTCCCGCCCCGGCCCAGGAGGTCAGCCGGGGGATCATTAACTAGAGGCCGTGACATG
LVRM1_0127_D02.b : AGGGTCCCGCCCCGGCCCAGGAGGTCAGCCGGGGGATCATTAACTAGAGGCCGTGACATG
LVR01_0050_G11.b : AGGGTCCCGCCCCGGCCCAGGAGGTCAGCCGGGGGATCATTAACTAGAGGCCGTGACATG
OVRM1_0117_G09.b : AGGGTCCCGCCCCGGCCCAGGAGGTCAGCCGGGGGATCATTAACTAGAGGCCGTGACATG
LVR01_0052_A05.b : AGGGTCCCGCCCCGGCCCAGGAGGTCAGCCGGGGGATCATTAACTAGAGGCCGTGACATG
LVR01_0104_E06.b : AGGGTCCCGCCCCGGCCCAGGAGGTCAGCCGGGGGATCATTAACTAGAGGCCGTGACATG
LVR01_0040_C12.b : AGGGTCCCGCCCCGGCCCAGGAGGTCAGCCGGGGGATCATTAACTAGAGGCCGTGACATG
LVR01_0035_G01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTAGAGGCCGTGACATG
LVRM1_0182_F12.b : catgctgctccggacccaaggtggcagctctcactgtggggaccgtgctgctcctgacag
LVR01_0095_D07.b :
20060611C-001285 : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
---------+---------+---------+---------+---------+---------+ 271
LVRM1_0113_C07.b : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
LVRM1_0204_B10.b : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
LVRM1_0127_D02.b : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
LVR01_0050_G11.b : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
OVRM1_0117_G09.b : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
LVR01_0052_A05.b : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
LVR01_0104_E06.b : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
LVR01_0040_C12.b : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
LVR01_0035_G01.b : GCGGAGAAAGAGGGTGGCCAGCCTGTGTCATGCTGCTCCGGACCCAAGGTGGCAGCTCTC
LVRM1_0182_F12.b : gcattggggcagcgtcctgggccattggtgagcgtggacggacccctgcgcctccacctt
LVR01_0095_D07.b :
20060611C-001285 : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
---------+---------+---------+---------+---------+---------+ 331
LVRM1_0113_C07.b : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
LVRM1_0204_B10.b : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
LVRM1_0127_D02.b : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
LVR01_0050_G11.b : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
OVRM1_0117_G09.b : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
LVR01_0052_A05.b : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
LVR01_0104_E06.b : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
LVR01_0040_C12.b : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
LVR01_0035_G01.b : ACTGTGGGGACCGTGCTGCTCCTGACAGGCATTGGGGCAGCGTCCTGGGCCATTGTGACC
LVRM1_0182_F12.b : cccctgccccctgcggcccccagcctgcctgccctcacctctgccttctctgcaGTGACC
LVR01_0095_D07.b :
20060611C-001285 : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
---------+---------+---------+---------+---------+---------+ 391
LVRM1_0113_C07.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
LVRM1_0204_B10.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
LVRM1_0127_D02.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
LVR01_0050_G11.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
OVRM1_0117_G09.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
LVR01_0052_A05.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
LVR01_0104_E06.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
LVR01_0040_C12.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
LVR01_0035_G01.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
LVRM1_0182_F12.b : GTTCTACTCAGGAGTGATCAGGAGCCGCTGTATCCAGTGCAGGTCGGCCCCGGGGATTCT
LVR01_0095_D07.b : ccttttgggtgxxxxxx
20060611C-001285 : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
---------+---------+---------+---------+---------+---------+ 451
LVRM1_0113_C07.b : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
LVRM1_0204_B10.b : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
LVRM1_0127_D02.b : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
LVR01_0050_G11.b : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
OVRM1_0117_G09.b : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
LVR01_0052_A05.b : CGGCTCACCGTGTTTGATGAGACGGAGGGTACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
LVR01_0104_E06.b : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
LVR01_0040_C12.b : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
LVR01_0035_G01.b : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
LVRM1_0182_F12.b : CGGCTCACCGTGTTTGATGAGACGGAGGGCACGTGGCGCCTGCTGTGCTCCTCGCGCTCC
LVR01_0095_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20060611C-001285 : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
---------+---------+---------+---------+---------+---------+ 511
LVRM1_0113_C07.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAAGTCACTGACCCAC
LVRM1_0204_B10.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
LVRM1_0127_D02.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
LVR01_0050_G11.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
OVRM1_0117_G09.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
LVR01_0052_A05.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
LVR01_0104_E06.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
LVR01_0040_C12.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
LVR01_0035_G01.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCACGTCACTGACCCAC
LVRM1_0182_F12.b : AACGCCAGGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
LVR01_0095_D07.b : xxxxxxxxGGTGGCAGGGCTCAGCTGCGAGGAGATGGGCTTCCTCAGGTCACTGACCCAC
20060611C-001285 : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
---------+---------+---------+---------+---------+---------+ 570
LVRM1_0113_C07.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
LVRM1_0204_B10.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
LVRM1_0127_D02.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
LVR01_0050_G11.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
OVRM1_0117_G09.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
LVR01_0052_A05.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
LVR01_0104_E06.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
LVR01_0040_C12.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
LVR01_0035_G01.b : TCTGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTCCTTCTGTGTGGA
LVRM1_0182_F12.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
LVR01_0095_D07.b : TCAGAGCTGGATGTGCGGACTGCGGGCGCCAACGGCACGTCGGGCTTC*TTCTGTGTGGA
20060611C-001285 : TGAGGGGAGGCTGCCGCAGGCCCGGAGGCTGCTTGAGGTCCTCTCCGTGTGCGACTGTCC
---------+---------+---------+---------+---------+---------+ 630
LVRM1_0113_C07.b : TGAGGGGAGGCTGCCGCAAGCCCGGAGGCTGCTTGAGGTCCTCTCTGTGTGCGACTGTCC
LVRM1_0204_B10.b : TGAGGGGAGGCTGCCGCANGCCCGGAAGCTGCTTGAGGTCCTCTCTGTGTGCGACTGTCC
LVRM1_0127_D02.b : TGAGGGGAGGCTGCCGNCAGCCCGGAGGCTGCTTGAGGTCCTCTCTGTGTGCGACTGTCC
LVR01_0050_G11.b : TGAGGGGAGGCTGCCGCAGGCCCGGAGGCTGCTTGAGGTCCTCTCCGTGTGCGACTGTCC
OVRM1_0117_G09.b : TGAGGGGAGGCTGCCGCANGCCCGGAGGCTGCTTGAGGTCCTCTCTGTGTGCGACTGTCC
LVR01_0052_A05.b : TGAGGGGAGGCTGCCGCAGGCCCGGAGGCTGCTTGAGGTCCTCTCCGTGTGCGACTGTCC
LVR01_0104_E06.b : TGAGGGGAGGCTGCCGCAGGCCCGGAGGCTGCTTGAGGTCCTCTCCGTGTGCGACTGTCC
LVR01_0040_C12.b : TGAGGGGAGGCTGCCGCAGGCCCGGAGGCTGCTTGAGGTCCTCTCCGTGTGCGACTGTCC
LVR01_0035_G01.b : TGAGGGGAGGCTGCCGCAGGCCCGGAGGCTGCTTGAGGTCCTCTCCGTGTGCGACTGTCC
LVRM1_0182_F12.b : TGAGGGGAGGCTGCCGCAGGCCCGGAGGCTGCTTGAGGTCCTCTCTGTGTGCGACTGTCC
LVR01_0095_D07.b : TGAGGGGAGGCTGCCGCAGGCCCGGAGGCTGCTTGAGGTCCTCTCCGTGTGCGACTGTCC
20060611C-001285 : CAGGGGCCATTTCCTGGCAACCACATGCCAAGACT*GCGGCCATAGGAAGCTGCCC*GTG
---------+---------+---------+---------+---------+---------+ 688
LVRM1_0113_C07.b : CACGGGCCATTTCCTGTGCACCACATGCCCAGACT*GCGGCCATAGGAAGCTGCCCCGTG
LVRM1_0204_B10.b : CATGGGCCATTTCCTGGCAACCACATGCCAAGACTAGCGGCCATA*GAANCTGCCC*GTG
LVRM1_0127_D02.b : CAGGGGCCATTTCCTGGCAACCACATGCCAAGACT*GCGGCCATAGGAAGCTGCCC*GTG
LVR01_0050_G11.b : CAGGGGCCATTTCCTGGCAACCACATGCCAAGACT*GCGGCCATAGGAAGCTGCCC*GTG
OVRM1_0117_G09.b : CAGGGGCCATTTCCTGGCNACCACATGCCAAGACT*GCGGCCATAGGAAGCTGCCC*GTG
LVR01_0052_A05.b : CAGGGGCCATTTCCTGGCAACCACATGCCAAGACT*GCGGCCATAGGAAGCTGCCC*GTG
LVR01_0104_E06.b : CAGGGGCCATTTCCTGGCAACCACATGCCAAGACT*GCGGCCATAGGAAGCTGCCC*GTG
LVR01_0040_C12.b : CAGGGGCCATTTCCTGGCAACCACATGCCAAGACT*GCGGCCATAGGAAGCTGCCC*GTG
LVR01_0035_G01.b : CAGGGGCCATTTCCTGGCAACCACTTGCCAACACT*GCGGCCTTATGAAGCTGTCT*TTG
LVRM1_0182_F12.b : CAGGGGCCATTTCCTGGCAACCACATGCCAAGACT*GCGGCCATAGGAAGCTGCCC*GTG
LVR01_0095_D07.b : CAGGGGCCATTTCCTGGCAACCACATGCCAAGACT*GCGGCCATAGGAAGCTGCCC*GTG
20060611C-001285 : GATCGCATT*GTGGGCGGTCA*GGACACCAGCCTGGGCCGGTGGCCGTGGCAAGTCAGTC
---------+---------+---------+---------+---------+---------+ 746
LVRM1_0113_C07.b : GATCGCATT*GTGGGCGGGCAAGGACACCACCCGGGGCCGG*GGACGTGGCAAGTCATTC
LVRM1_0204_B10.b : GATCGCATT*GTGGGCAGTCA*GGACACCANCCTGGGCCGGTGGCCGTGGCAAGTCAatc
LVRM1_0127_D02.b : GATCGCATT*GGGGGCGGTCA*GGACACCAGCCTGGGCCGGTGGCCGTGGCAAGTCAG
LVR01_0050_G11.b : GATCGCATT*GTGGGCGGTCA*GGACACCAGCCTGGGCCGGTGGCCGTGGCAAGTCAGTC
OVRM1_0117_G09.b : GATCGCATT*GTGGGCGGTCA*GGACACCAGCCTGGGCCGGTGGCCGTGGCAAGTCAGTC
LVR01_0052_A05.b : GATCGCATT*GTGGGCGGTCA*GGACACCAGCCTGGGCCGGTGGCCGTGGCAAGTCAGTC
LVR01_0104_E06.b : GATCGCATT*GTGGGCGGTCA*GGACACCAGCCTGGGCCGGTGGCCGTGGCAAGTCAGTC
LVR01_0040_C12.b : GATCGCATT*GTGGGCGGTCA*GGACACCAGCCTGGGCCGGTGGCCGTGGCAAGTCAGTC
LVR01_0035_G01.b : GATCCCATTTGTGGGCGGTCT*CGACACCAGCTTGGGCCCGTGGTTGTGGCAAGTCAGTC
LVRM1_0182_F12.b : GATCGCATT*GTGGGCGGTCA*GGACACCAGCCTGGGCCGGTGGCCGTGGCAAGTCAGTC
LVR01_0095_D07.b : GATCGCATT*GTGGGCGGTCA*GGACACCAGCCTGGGCCGGTGGCCGTGGCAAGTCAGTC
20060611C-001285 : *TTCGCTACGACGGAGCACACCTCTGTG*GGGGAT*CCCTGC*TCTCCAAAGACTGGGTG
---------+---------+---------+---------+---------+---------+ 802
LVRM1_0113_C07.b : *TTCGCTACAACGGAACACAC
LVRM1_0204_B10.b : ctcgcta
LVRM1_0127_D02.b :
LVR01_0050_G11.b : *TTCGCTACGACGGAGCACACCTCTGTG*GGGGAT*CCCTGC*TCTCCAAAGACTGGGTG
OVRM1_0117_G09.b : *TTCGCTACGACGGAGCACACCTCTGTG*GGGGAT*CCCTGCn
LVR01_0052_A05.b : *TTCGCTACGACGGAGCACACCTCTGTG*GGGGAT*CCCTGC*TCTCCAAATACTGGGTG
LVR01_0104_E06.b : *TTCGCTACGACGGAGCACACCTCTGTG*GGGGATCCCCTGC*TCTCCAAAGACTGGGTG
LVR01_0040_C12.b : *TTCGCTACGACGGAGCACACCTCTGTG*GGGGAT*CCCTGC*TCTCCCAAGACTGGGTG
LVR01_0035_G01.b : TTTTCCTACAACGGACCACACCTCTGGGCGGGCAT*CCCTGCTTCTCCTAAGACAGGGTG
LVRM1_0182_F12.b : *TTCGCTACGACGGAGCACACCTCTGTG*GGGGAT*CCCTGC*TCTCCAAAGACTGGGTG
LVR01_0095_D07.b : *TTCGCTACGACGGAGCACACCTCTGTG*GGGGAT*CCCTGC*TCTCCAAAGACTGGGTG
20060611C-001285 : CTGAC*AGCCGCCC*ACTGCTT**CCCCGA***GCGGAACCGGGTC*CTGTCTCGATG*G
---------+---------+---------+---------+---------+---------+ 853
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b : CTGAC*AGCCGCCC*ACTGCTT**CCCCGA***GCGGAAACGGGTC*CTGTCTCGATG*G
OVRM1_0117_G09.b :
LVR01_0052_A05.b : CTGACAACCCGCCC*ACTGCTT**CCCCCA***ACGAAACCGGGTC*CTGTCTCGATG*G
LVR01_0104_E06.b : CTGAC*AGCCGCCC*ACTGCTT**TCCCGA***GCGGAACCGGGTC*CTGTCTCGATGGG
LVR01_0040_C12.b : CTGAC*AGCCGCCCCACTGCTTTCCCCCGATAGGCGGAACCGGGTCCCTGTCTCGATG*G
LVR01_0035_G01.b : CTGAC*CGCCCCCC*ATTGCTT**CCTCGAtaagtatcgggttctgtttctatggctcat
LVRM1_0182_F12.b : CTGAC*AGCCGCCC*ACTGCTT**TCCCGA***GCGGAACCGGGTC*CTGTCTCGA
LVR01_0095_D07.b : CTGAC*AGCCGCCC*ACTGCTT**CCCCGA***GCGGAACCGGGTC*CTGTCTCGATG*G
20060611C-001285 : CGAGTATT*CG*CCGGTGCTGTGG*CCCAGACCTCACCCCACGGCCTGCAGAT*GGGGGT
---------+---------+---------+---------+---------+---------+ 909
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b : TGAGTATT*CG*CCGGTGCTGTGG*CCCAGAACTCACCCC*CGGCCCTGCAAATGGGGGT
OVRM1_0117_G09.b :
LVR01_0052_A05.b : CGAGTATT*CC*CCGGTGCCTTGG*CCCCAACCTCACCCCACGGCCctccaaatggaggt
LVR01_0104_E06.b : CGAGTATTTCGCCCGGTGCTGTGGGCCCAGACCTCACCCCCCGGCCTGCAAATGGGGGGT
LVR01_0040_C12.b : CGAGTATT*CG*CCGGGGCTGGGG*CCCAGACCTCACCCCACAGCCTGCAAAAGGGGGGT
LVR01_0035_G01.b : attctcccgggctatgggacaatatctcaacccaacggacggcaaatagagatgcacgca
LVRM1_0182_F12.b :
LVR01_0095_D07.b : CGAGTATT*CG*CCGGTGCTGTGG*CCCAGACCTCACCCCACGGCCTGCAGAT*GGGGGT
20060611C-001285 : GCAGG*CGGTGATCTACCA*TGGGGACTATCTCCCC*TTTCGAGACCCCAACAGCGAGGA
---------+---------+---------+---------+---------+---------+ 966
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b : GCAGG*CGGTGATCTACCATGGGGAACTATCTCCCCCTTTCgaaacccccaacaccaagg
OVRM1_0117_G09.b :
LVR01_0052_A05.b : gcaaagcagttaatttaactttggaaaactttctccccagttcaaaaccccaaacacaaa
LVR01_0104_E06.b : GCAGGCCGGTGATCTACCCTTGGGGACTATCTCCCCctttcaaaaaccccaacaacgaag
LVR01_0040_C12.b : GCCGG*CGGTGATCTACCCATGGGGACTATCTCCCCttttgagaacccaaccgccgagga
LVR01_0035_G01.b : tgttatcccccctcggtaacatttacctctaatctaacctcctcatctcactaaactttt
LVRM1_0182_F12.b :
LVR01_0095_D07.b : GCAGG*CGGTGATCTACCA*TGGGGACTATCTCCCC*TTTCGAGACCCCAACAGCGAGGA
20060611C-001285 : GAACAGCAATGATATCGCCCTGGTCCACCTCTCCAGCTCCCTGGTCCTCACAGAATACAT
---------+---------+---------+---------+---------+---------+ 1026
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b : aaaaaaacaattgaaattccccctggtccccctttc
OVRM1_0117_G09.b :
LVR01_0052_A05.b : gaaataccaccctttatgtccccccctagaacccccctcctccagcggcaccaggacccc
LVR01_0104_E06.b : aaaaaacaccaatgaataccgcccctgggtccaccttctccagcttcccttggtccctcc
LVR01_0040_C12.b : aaaaagcaatgaaattcccccctggtccacctcctccacccccctgggtccctccaaaaa
LVR01_0035_G01.b : caatcattcctctccttgttccccccccccttcaaaaccctggcccaatacacataccat
LVRM1_0182_F12.b :
LVR01_0095_D07.b : GAACAGCAATGATATCGCCCTGGTCCACCTCTCCAGCTCCCTGGTCCTCACAGAATACAT
20060611C-001285 : CCAGCCCGTGTGCCTCCCGGCTGCCGGCCAAGCCCTGGTGGACGGCAAGATCTGCACGGT
---------+---------+---------+---------+---------+---------+ 1086
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b : caaac
LVR01_0104_E06.b : caagggtaaacttaaggggaccccaattcctttggcccttttgggggaaatttcccgggg
LVR01_0040_C12.b : aaaaatcccagcccccgggtgcccttccccgggtggcccggccaaaccccccggggtgga
LVR01_0035_G01.b : catcccccgtggggcaccctcgattgctcttctttcttctgtgcgtaaatctattcatct
LVRM1_0182_F12.b :
LVR01_0095_D07.b : CCAGCCCGTGTGCCTCCCGGCTGCCGGCCAAGCCCTGGTGGACGGCAAGATCTGCACGGT
20060611C-001285 : GACAGGCTGGGGCAACACGCAGTACTACGGCCAACAGGCTGGGGTGCTCCAGGAGGCCCC
---------+---------+---------+---------+---------+---------+ 1146
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b : ggcccagggaaccaaaaaaaaaaagaagggggggctggggggggcttttggggaaaaatt
LVR01_0040_C12.b : aacgggaaaaaaatttttcacagggggaaaagggggttgggggggcaaaaaccccccaaa
LVR01_0035_G01.b : ttttccatcacttcacctagattcatcacacacctaaacttctcttccaccttctccttg
LVRM1_0182_F12.b :
LVR01_0095_D07.b : GACAGGCTGGGGCAACACGCAGTACTACGGCCAACAGGCTGGGGTGCTCCAGGAGGCCCC
20060611C-001285 : GAGTCCCCCATAATCAGCAATGATGTCTGCAATGGCCCCGACTTCTACGGAAACCAGATC
---------+---------+---------+---------+---------+---------+ 1206
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b : cccctgtggagaaggggggggagaagggggaaaaaaaaaacccaaatttttttcctct
LVR01_0040_C12.b : aaaaata
LVR01_0035_G01.b : ctagatacaataaagctacctcactttcctcctctaactccaatctctccactattctac
LVRM1_0182_F12.b :
LVR01_0095_D07.b : GAGTCCCCCATAATCAGCAATGATGTCTGCAATGGCCCCGACTTCTACGGAAACCAGATC
20060611C-001285 : AAAGCCAAGATGTTCTGTGCCCGCTACCCTGAGGGTGGCATTGACGCCTGCCAGGGTGAC
---------+---------+---------+---------+---------+---------+ 1266
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b :
LVR01_0040_C12.b :
LVR01_0035_G01.b : cacctcgccccacccgcacccttatccatacataaaacccttcaatcacacacccccctc
LVRM1_0182_F12.b :
LVR01_0095_D07.b : AAAGCCAAGATGTTCTGTGCCCGCTACCCTGAGGGTGGCATTGACGCCTGCCAGGGTGAC
20060611C-001285 : AGTGGTGGCCCCC...............................................
---------+---------+---------+---------+---------+---------+ 1279
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b :
LVR01_0040_C12.b :
LVR01_0035_G01.b : accactatacatacccatgtcctatttcttaccctaatccacctctcactaagaacttct
LVRM1_0182_F12.b :
LVR01_0095_D07.b : AGTGGTGGCCCCCtccgtgtgtgaggacagcatctctcggaacccccgctggcggctgtg
20060611C-001285 : ............................................................
---------+---------+---------+---------+---------+---------+ 1279
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b :
LVR01_0040_C12.b :
LVR01_0035_G01.b : tgcttccttccttcctatcccaatcgcccccccctctccccttn
LVRM1_0182_F12.b :
LVR01_0095_D07.b : tgggatcctgaactggggcaccgggtggtcccctggccccaaagccaggggtcttcccca
20060611C-001285 : ............................................................
---------+---------+---------+---------+---------+---------+ 1279
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b :
LVR01_0040_C12.b :
LVR01_0035_G01.b :
LVRM1_0182_F12.b :
LVR01_0095_D07.b : aaatcagtggcttcccgggaataaaattttcacgcccataaagaccccattccaaaaccc
20060611C-001285 : ............................................................
---------+---------+---------+---------+---------+---------+ 1279
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b :
LVR01_0040_C12.b :
LVR01_0035_G01.b :
LVRM1_0182_F12.b :
LVR01_0095_D07.b : ccggggcattgggcgaccccaccttctgaccttttcggcttcttgttcccctgccctctc
20060611C-001285 : ............................................................
---------+---------+---------+---------+---------+---------+ 1279
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b :
LVR01_0040_C12.b :
LVR01_0035_G01.b :
LVRM1_0182_F12.b :
LVR01_0095_D07.b : cccctccaggggcccccaaaactttaattccaggggggggttcccctgccccccccccat
20060611C-001285 : ............................................................
---------+---------+---------+---------+---------+---------+ 1279
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b :
LVR01_0040_C12.b :
LVR01_0035_G01.b :
LVRM1_0182_F12.b :
LVR01_0095_D07.b : ggaaagggggggtttccccccccccggggggccccctggggggaaaaataaaaaaaattt
20060611C-001285 : ............................................................
---------+---------+---------+---------+---------+---------+ 1279
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b :
LVR01_0040_C12.b :
LVR01_0035_G01.b :
LVRM1_0182_F12.b :
LVR01_0095_D07.b : tttttttttcttctctcttttggggggtcccccccctgccccccctcaccaacggggggg
20060611C-001285 : ............................................................
---------+---------+---------+---------+---------+---------+ 1279
LVRM1_0113_C07.b :
LVRM1_0204_B10.b :
LVRM1_0127_D02.b :
LVR01_0050_G11.b :
OVRM1_0117_G09.b :
LVR01_0052_A05.b :
LVR01_0104_E06.b :
LVR01_0040_C12.b :
LVR01_0035_G01.b :
LVRM1_0182_F12.b :
LVR01_0095_D07.b : cccttccccaaaag