Assembly Overview: TOP
BLAST on RefSeq (Human): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| ME2 | malic enzyme 2, NAD(+)-dependent, mitochondrial | 532 | e-151 | O |
|
| LOC286239 | similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2) | 333 | 1e-91 | O |
|
| LOC286239 | similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2) | 333 | 1e-91 | O |
|
| ME1 | malic enzyme 1, NADP(+)-dependent, cytosolic | 332 | 5e-91 | O |
|
| ME3 | malic enzyme 3, NADP(+)-dependent, mitochondrial | 331 | 8e-91 | O |
|
| ME3 | malic enzyme 3, NADP(+)-dependent, mitochondrial | 331 | 8e-91 | O |
BLAST on RefSeq (Mouse): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Dog): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Cattle): TOP
| | Locus | Definition | Score | E value | FL |
---|
BLAST on RefSeq (Pig): TOP
| | Locus | Definition | Score | E value | FL |
---|
Alignment: TOP
20060611C-002330 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
THY01_0015_A12.b :
DCI01_0038_E04.b : ngtatctatagggctgctcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0021_D12.b :
ITT01_0057_B08.b :
DCI01_0011_B03.b :
20060611C-002330 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
THY01_0015_A12.b : tagcaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0038_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0021_D12.b : gcttggcattcgtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0057_B08.b : nnnggtgxxxxxxx
DCI01_0011_B03.b :
20060611C-002330 : ...............................GGGACTACGCGGGTTTACTGGTGGCCTCC
---------+---------+---------+---------+---------+---------+ 29
THY01_0015_A12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGGACTACGCGGGTTTACTGGTGGCCTCC
DCI01_0038_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACTACGCGGATTTACTGGTGGCCTCC
LNG01_0021_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgaTTTACTGGTGGCCTCC
ITT01_0057_B08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxctTTTACTGGTGGCCTCC
DCI01_0011_B03.b :
20060611C-002330 : CCGGTATCCAGCCGACCCGGCCGGGTGGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
---------+---------+---------+---------+---------+---------+ 89
THY01_0015_A12.b : CCGGTATCCAGCCGACCCGGCCGGGTAGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
DCI01_0038_E04.b : CCGGTATCCAGCCGACCCGGCCGGGTGGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
LNG01_0021_D12.b : CCGGTATCCAGCCGACCCGGCCGGGTGGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
ITT01_0057_B08.b : CCGGTATCCAGCCGACCCGGCCGGGTGGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
DCI01_0011_B03.b :
20060611C-002330 : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
---------+---------+---------+---------+---------+---------+ 149
THY01_0015_A12.b : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
DCI01_0038_E04.b : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
LNG01_0021_D12.b : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
ITT01_0057_B08.b : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
DCI01_0011_B03.b : nnnnccgatacaaxxxxxxx
20060611C-002330 : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
---------+---------+---------+---------+---------+---------+ 209
THY01_0015_A12.b : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
DCI01_0038_E04.b : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
LNG01_0021_D12.b : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
ITT01_0057_B08.b : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
DCI01_0011_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20060611C-002330 : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAT
---------+---------+---------+---------+---------+---------+ 269
THY01_0015_A12.b : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAC
DCI01_0038_E04.b : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAT
LNG01_0021_D12.b : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAT
ITT01_0057_B08.b : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAT
DCI01_0011_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20060611C-002330 : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
---------+---------+---------+---------+---------+---------+ 329
THY01_0015_A12.b : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
DCI01_0038_E04.b : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
LNG01_0021_D12.b : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
ITT01_0057_B08.b : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
DCI01_0011_B03.b : xxxxxxxxxxxxxxxxxCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
20060611C-002330 : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
---------+---------+---------+---------+---------+---------+ 389
THY01_0015_A12.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
DCI01_0038_E04.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
LNG01_0021_D12.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
ITT01_0057_B08.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
DCI01_0011_B03.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
20060611C-002330 : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGCTGAATGGCCCTTTGGAAAA
---------+---------+---------+---------+---------+---------+ 449
THY01_0015_A12.b : AGATATTCAAGCTTTACGATTCCATAGAAATGTGAAAAAGTTGAATGGCCCTTTGGAAAA
DCI01_0038_E04.b : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGCTGAATGGCCCTTTGGAAAA
LNG01_0021_D12.b : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGCTGAATGGCCCTTTGGAAAA
ITT01_0057_B08.b : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGCTGAATGGCCCTTTGGAAAA
DCI01_0011_B03.b : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGTTGAATGGCCCTTTGGAAAA
20060611C-002330 : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
---------+---------+---------+---------+---------+---------+ 509
THY01_0015_A12.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
DCI01_0038_E04.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
LNG01_0021_D12.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
ITT01_0057_B08.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
DCI01_0011_B03.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
20060611C-002330 : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
---------+---------+---------+---------+---------+---------+ 569
THY01_0015_A12.b : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
DCI01_0038_E04.b : AGATGATATTGAAACTCCTATGCCAATTGTATATACACCCACAGTTGGTCTTGCCTGTTC
LNG01_0021_D12.b : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
ITT01_0057_B08.b : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
DCI01_0011_B03.b : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
20060611C-002330 : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
---------+---------+---------+---------+---------+---------+ 629
THY01_0015_A12.b : CCAGTATGGACGCATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
DCI01_0038_E04.b : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
LNG01_0021_D12.b : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
ITT01_0057_B08.b : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
DCI01_0011_B03.b : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
20060611C-002330 : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTGGTGAC
---------+---------+---------+---------+---------+---------+ 689
THY01_0015_A12.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTGGTGAC
DCI01_0038_E04.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAAGCTGTTGTGGTGAC
LNG01_0021_D12.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTGGTGAC
ITT01_0057_B08.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTATGGTGAC
DCI01_0011_B03.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTGGTGAC
20060611C-002330 : TGATGG*AGAGAGAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAG
---------+---------+---------+---------+---------+---------+ 748
THY01_0015_A12.b : TGATGG*AGAGAGATT*CTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGNANTNCAG
DCI01_0038_E04.b : TGATGNAAAAGAGATTTCTGGGTCTGGGAGATCTGGGTGTCTATGAAATGGA*ATTTCCG
LNG01_0021_D12.b : TGATGG*AGAGAGAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAG
ITT01_0057_B08.b : TGATGG*AGAGAGAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAG
DCI01_0011_B03.b : TGATGG*AGAGAGAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAG
20060611C-002330 : TAGGAAAACTATGTTTGTATACAGCTTGTGCAGGAATACGGCCTGATAGATGTCTGCCTG
---------+---------+---------+---------+---------+---------+ 808
THY01_0015_A12.b : TANGAAAACTATGTTTGTATACAGCTTGTGCAGGGATACGGCCTGATAGATGTCTGCCTG
DCI01_0038_E04.b : TAGGAAAACTATGTTTGTATACAcctgggccggataacgcctggaaaatgccggcctggg
LNG01_0021_D12.b : TAGGAAAACTATGTTTGTATACAGCTTGTGCAGGAATACGGCCTGATAGATGTCTGCCTG
ITT01_0057_B08.b : TAGGAAAACTATGTTTGTATACAGCTTGTGCAGGAATACGGCCTGATAGATGTCTGCCTG
DCI01_0011_B03.b : TAGGAAAACTATGTTTGTATACAGCTTGTGCAGGAATACGGCCTGATAGATGTCTGCCTG
20060611C-002330 : TGTGTATTGATGTAGGAACCGATAATCCAGCACTCTTAAAAGACCCATTTTACATGGGCT
---------+---------+---------+---------+---------+---------+ 868
THY01_0015_A12.b : TGTGTATTGATGTAAGAACCGATTATCCAGCACTCCTAAAAGA*CCATTTAAC*TGGGCT
DCI01_0038_E04.b : ggatgatgtagaacccaatatcccccctcttaaaagacccttttactgggccttattcca
LNG01_0021_D12.b : TGTGTATTGATGTAGGAACCGATAATCCAGCACTCTTAAAAGAACCATTTTACTTGGGCT
ITT01_0057_B08.b : TGTGTATTGATGTAGGAACCGATAATCCAGCACTCTTAAAAGACCCATTTTACATGGGCT
DCI01_0011_B03.b : TGTGTATTGATGTAGGAACCGATAATCCAGCACTCTTAAAAGACCCATTTTACATGGGCT
20060611C-002330 : TATATCAGAAAAGAGATCGATCACAGCGTTATGATGATCTAATTGATGAATTTAT*GAAG
---------+---------+---------+---------+---------+---------+ 927
THY01_0015_A12.b : TATAtcan
DCI01_0038_E04.b : aaagaaatccatccaccctttggaggatccaattgggaatttttgaggcccttactgaag
LNG01_0021_D12.b : TATATCAAAAAAGAGATCGATCACAGCGTTTTGATGATTTAATTGATGAATTTTTTAAAG
ITT01_0057_B08.b : TATATCAGAAAAGAGATCGATCACAGCGTTATGATGATCNTATTGATGAATTTATNGAAG
DCI01_0011_B03.b : TATATCAGAAAAGAGATCGATCACAGCGTTATGATGATCTAATTGATGAATTTAT*GAAG
20060611C-002330 : GCCATTACTG*ACAGATATGGACGGAACATACTTATTCAGTTTGAAGACTTTGGAAATCA
---------+---------+---------+---------+---------+---------+ 986
THY01_0015_A12.b :
DCI01_0038_E04.b : aacgggacggaaattctttttcgttttgaaaatttggaatcctatgccttccggttcttg
LNG01_0021_D12.b : GCCCTTACTGGACAAATATGGACGGAACATACTTtattcattttgaaaaactttggaaat
ITT01_0057_B08.b : GCA*TTACTG*ACAGATATGGACGGAACATACTTATTCAGTTTGA*GACTTTGGNAATCA
DCI01_0011_B03.b : GCCATTACTG*ACAGATATGGACGGAACATACTTATTCAGTTTGAAGACTTTGGAAATCA
20060611C-002330 : TAATGTATTCAGGTTCTTGAGAAAAATACGAGAAAATATTGTACCCTTCATGACAATATT
---------+---------+---------+---------+---------+---------+ 1046
THY01_0015_A12.b :
DCI01_0038_E04.b : aaaaatccggaaaaatttggaccccaggaaaatttcaggggacctgcgaaacctactgtc
LNG01_0021_D12.b : cataatggatttcgggttccttgaaaaaaatacccgaaaaaaaaatttttgtacctttcc
ITT01_0057_B08.b : T*ATGCATTCAGGTTCTgagaaataccgagaaaaatatgtacctcaatgacgatattcag
DCI01_0011_B03.b : TAATGTATTCAGGTTCTTGAGAAAAATACGAGAAAATATTGTACCCTTCATGACAATATT
20060611C-002330 : CAAGGGACAGCTGCAGTAGCTCTAGCTGGTCTGCTTGCAGCCCAAAAAGTTATGGTAAAT
---------+---------+---------+---------+---------+---------+ 1106
THY01_0015_A12.b :
DCI01_0038_E04.b : tgttggccccaaagtttgtgtaatcccctccaaccaattttttttttgggggaagggccc
LNG01_0021_D12.b : aatgaacaatattttaaggggaacagcctgcccctttaaccttcttactttgggtccttg
ITT01_0057_B08.b : ggacgctgcagtactctagctgtctgctgcagccnnaaagtattggtaaatcatctagac
DCI01_0011_B03.b : CAAGGGACAGCTGCAGTAGCTCTAGCTGGTCTGCTTGCAGCCCAAAAAGTTATGGTAAAT
20060611C-002330 : CCATCTCAGAACACAAAATCTTATTTC.................................
---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :
DCI01_0038_E04.b : tgaatcaactctattggccggggaaggccccccgaaaacccaaaaattggggggactggt
LNG01_0021_D12.b : cctttgcacaccccccaaaaaaaattttttttttgtgggtaaaaattctcccctttcctt
ITT01_0057_B08.b : ccaatcttattctgnaacggagagctgcctggatgccatctaaanttgcctggnaaaagg
DCI01_0011_B03.b : CCATCTCAGAACACAAAATCTTATTTCttgnaacggaaaagctgctcttgnaattgcaat
20060611C-002330 : ............................................................
---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :
DCI01_0038_E04.b : ttttttgggggaaaaaaaaattagaggtttccccccaaattgtattgaggaaaatatcct
LNG01_0021_D12.b : ccccaaaaaaaaacaaaaaaaaaaaaaaatttct
ITT01_0057_B08.b : cccctcgaaaactcaaaaattggtgttacanttgtttatttaggggaagtaaaaaatttg
DCI01_0011_B03.b : cttataattaggctatgtaaaaaatggctctcggagaagagccaaagaaaattggatgtt
20060611C-002330 : ............................................................
---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :
DCI01_0038_E04.b : caatggggggggcctttctttaccg
LNG01_0021_D12.b :
ITT01_0057_B08.b : gacgtgtcccccccaaattcgaattaaggaaactacctccaatgggtggggccttccatg
DCI01_0011_B03.b : gacagttggtttatattnaggggcggagctaaataacgtcatcagaccgttgctcccagc
20060611C-002330 : ............................................................
---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :
DCI01_0038_E04.b :
LNG01_0021_D12.b :
ITT01_0057_B08.b : aagcggtatgggttttttttcccggggccaaaaacaaagttttttttttgagggggnnnn
DCI01_0011_B03.b : caaaaacatctgaaatttgagagcataattactaacctcacaaaatggatgcggactgcc
20060611C-002330 : ............................................................
---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :
DCI01_0038_E04.b :
LNG01_0021_D12.b :
ITT01_0057_B08.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
DCI01_0011_B03.b : actttccctagtaacagcttgcgatcatgaagccaaattgttatactcagccggtagttc
20060611C-002330 : ............................................................
---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :
DCI01_0038_E04.b :
LNG01_0021_D12.b :
ITT01_0057_B08.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
DCI01_0011_B03.b : ccaaacatacttcaggagtttttcggggcttggccaacaggggggttccggggaagaaat
20060611C-002330 : ............................................................
---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :
DCI01_0038_E04.b :
LNG01_0021_D12.b :
ITT01_0057_B08.b :
DCI01_0011_B03.b : ttcggttttttttcacccaaaattttgggcgccattaaaaaggagctccttttttt